Multiple sequence alignment - TraesCS5A01G209500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G209500 chr5A 100.000 4786 0 0 1 4786 423006754 423011539 0.000000e+00 8839.0
1 TraesCS5A01G209500 chr5A 96.078 51 2 0 2999 3049 423009719 423009769 3.070000e-12 84.2
2 TraesCS5A01G209500 chr5A 96.078 51 2 0 2966 3016 423009752 423009802 3.070000e-12 84.2
3 TraesCS5A01G209500 chr5B 91.830 1836 95 30 1208 3016 377204094 377205901 0.000000e+00 2508.0
4 TraesCS5A01G209500 chr5B 91.149 1062 43 20 2999 4053 377205851 377206868 0.000000e+00 1393.0
5 TraesCS5A01G209500 chr5B 94.884 430 11 4 751 1176 377203673 377204095 0.000000e+00 662.0
6 TraesCS5A01G209500 chr5B 85.455 385 46 9 1 381 377195815 377196193 4.490000e-105 392.0
7 TraesCS5A01G209500 chr5B 86.730 211 19 7 409 615 377203479 377203684 4.820000e-55 226.0
8 TraesCS5A01G209500 chr5D 95.577 1221 31 11 751 1954 324758375 324759589 0.000000e+00 1934.0
9 TraesCS5A01G209500 chr5D 93.460 1101 56 8 2999 4092 324760629 324761720 0.000000e+00 1620.0
10 TraesCS5A01G209500 chr5D 88.311 1095 74 31 1951 3016 324759610 324760679 0.000000e+00 1264.0
11 TraesCS5A01G209500 chr5D 85.886 581 74 7 1 579 324757779 324758353 3.170000e-171 612.0
12 TraesCS5A01G209500 chr5D 88.084 428 50 1 4303 4729 525121233 525121660 1.540000e-139 507.0
13 TraesCS5A01G209500 chr5D 95.000 60 3 0 4117 4176 324761703 324761762 1.420000e-15 95.3
14 TraesCS5A01G209500 chr6D 88.041 485 56 2 4303 4786 110985142 110984659 1.490000e-159 573.0
15 TraesCS5A01G209500 chr1D 84.657 554 74 5 4234 4786 254780068 254780611 4.210000e-150 542.0
16 TraesCS5A01G209500 chr4D 84.587 545 67 10 4241 4784 484744264 484744792 4.240000e-145 525.0
17 TraesCS5A01G209500 chr1B 86.682 443 57 2 4328 4769 357667190 357666749 1.550000e-134 490.0
18 TraesCS5A01G209500 chr3B 82.703 555 81 12 4234 4786 102973654 102974195 3.350000e-131 479.0
19 TraesCS5A01G209500 chr2A 84.286 490 70 6 4302 4786 686008674 686009161 5.610000e-129 472.0
20 TraesCS5A01G209500 chr7D 85.843 445 52 5 4234 4677 614920635 614921069 3.370000e-126 462.0
21 TraesCS5A01G209500 chr7D 80.874 549 78 14 4241 4785 118822464 118821939 1.600000e-109 407.0
22 TraesCS5A01G209500 chr1A 82.051 546 89 3 4235 4779 452288320 452287783 1.570000e-124 457.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G209500 chr5A 423006754 423011539 4785 False 3002.466667 8839 97.385333 1 4786 3 chr5A.!!$F1 4785
1 TraesCS5A01G209500 chr5B 377203479 377206868 3389 False 1197.250000 2508 91.148250 409 4053 4 chr5B.!!$F2 3644
2 TraesCS5A01G209500 chr5D 324757779 324761762 3983 False 1105.060000 1934 91.646800 1 4176 5 chr5D.!!$F2 4175
3 TraesCS5A01G209500 chr1D 254780068 254780611 543 False 542.000000 542 84.657000 4234 4786 1 chr1D.!!$F1 552
4 TraesCS5A01G209500 chr4D 484744264 484744792 528 False 525.000000 525 84.587000 4241 4784 1 chr4D.!!$F1 543
5 TraesCS5A01G209500 chr3B 102973654 102974195 541 False 479.000000 479 82.703000 4234 4786 1 chr3B.!!$F1 552
6 TraesCS5A01G209500 chr7D 118821939 118822464 525 True 407.000000 407 80.874000 4241 4785 1 chr7D.!!$R1 544
7 TraesCS5A01G209500 chr1A 452287783 452288320 537 True 457.000000 457 82.051000 4235 4779 1 chr1A.!!$R1 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
696 699 0.034574 ACTGCATAAATCACGGGGCA 60.035 50.0 0.00 0.00 0.00 5.36 F
745 748 0.107654 GAGTACCCCTGCGCATTTCT 60.108 55.0 12.24 3.88 0.00 2.52 F
2270 2313 0.108804 ATCCTCACGTACGTGCCTTG 60.109 55.0 37.13 25.78 45.04 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2349 2392 0.108992 CTAGAACTGCACGCCCGTAA 60.109 55.0 0.0 0.0 0.00 3.18 R
2393 2436 1.045911 AGTCTGCGGGGAGATTCCTC 61.046 60.0 0.0 0.0 36.57 3.71 R
4115 4201 0.035439 CCCCAACGCACCAAGTATCT 60.035 55.0 0.0 0.0 0.00 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.678336 CCTTTGTTCATAGGAAGGACGC 59.322 50.000 3.76 0.00 40.86 5.19
60 61 6.183360 CGGTCTTAGAGTTATGGTGGATGTTA 60.183 42.308 0.00 0.00 0.00 2.41
63 64 8.038944 GTCTTAGAGTTATGGTGGATGTTACAA 58.961 37.037 0.00 0.00 0.00 2.41
64 65 8.598916 TCTTAGAGTTATGGTGGATGTTACAAA 58.401 33.333 0.00 0.00 0.00 2.83
65 66 9.226606 CTTAGAGTTATGGTGGATGTTACAAAA 57.773 33.333 0.00 0.00 0.00 2.44
74 75 4.096382 GTGGATGTTACAAAATCGGCTCAT 59.904 41.667 0.00 0.00 0.00 2.90
87 88 2.680913 GCTCATGCCGTTGCGAAGT 61.681 57.895 0.00 0.00 41.78 3.01
89 90 2.176546 CATGCCGTTGCGAAGTGG 59.823 61.111 0.00 0.00 41.78 4.00
92 93 4.389576 GCCGTTGCGAAGTGGCAG 62.390 66.667 7.98 0.00 46.76 4.85
93 94 4.389576 CCGTTGCGAAGTGGCAGC 62.390 66.667 0.00 0.00 44.94 5.25
108 109 2.103042 CAGCGGCTAGTTCTGCACC 61.103 63.158 0.26 0.00 40.71 5.01
109 110 3.188786 GCGGCTAGTTCTGCACCG 61.189 66.667 5.37 5.37 46.50 4.94
130 131 3.133014 CATGGTCGGCCTCTCGAT 58.867 61.111 7.97 0.00 41.40 3.59
132 133 2.502492 ATGGTCGGCCTCTCGATGG 61.502 63.158 7.97 0.71 41.40 3.51
133 134 2.833582 GGTCGGCCTCTCGATGGA 60.834 66.667 0.00 0.00 41.40 3.41
153 154 4.875536 TGGACACGATAATGATCTTTGGTG 59.124 41.667 14.69 14.69 0.00 4.17
165 166 1.922447 TCTTTGGTGGGCATACATCCT 59.078 47.619 0.00 0.00 0.00 3.24
166 167 2.026641 CTTTGGTGGGCATACATCCTG 58.973 52.381 0.00 0.00 0.00 3.86
176 177 2.775890 CATACATCCTGCACCCATCTC 58.224 52.381 0.00 0.00 0.00 2.75
183 184 1.198713 CTGCACCCATCTCCTAGTGT 58.801 55.000 0.00 0.00 32.75 3.55
186 187 1.137872 GCACCCATCTCCTAGTGTCAG 59.862 57.143 0.00 0.00 32.75 3.51
191 192 3.435746 CCCATCTCCTAGTGTCAGCTCTA 60.436 52.174 0.00 0.00 0.00 2.43
209 210 3.226777 TCTAGCCTAGCATGGAGAACTC 58.773 50.000 0.00 0.00 0.00 3.01
211 212 0.747255 GCCTAGCATGGAGAACTCGA 59.253 55.000 0.00 0.00 0.00 4.04
221 222 3.157881 TGGAGAACTCGAAGATGTGACT 58.842 45.455 0.00 0.00 33.89 3.41
232 233 3.791973 AGATGTGACTGTCGGAAGATC 57.208 47.619 2.98 0.00 45.19 2.75
233 234 3.092301 AGATGTGACTGTCGGAAGATCA 58.908 45.455 2.98 0.00 45.19 2.92
241 242 1.079503 GTCGGAAGATCAGTTGCCAC 58.920 55.000 0.00 0.00 45.19 5.01
279 281 2.222027 CTTCATATCCGGGGTGAAAGC 58.778 52.381 0.00 0.00 32.08 3.51
304 306 0.537143 TTCTGGCGTTTGCTGGTCAT 60.537 50.000 0.00 0.00 42.25 3.06
310 312 1.394917 GCGTTTGCTGGTCATACTCAG 59.605 52.381 0.00 0.00 38.39 3.35
340 342 5.445407 GCGAACTTGCGTCATTATCTTGTTA 60.445 40.000 0.00 0.00 0.00 2.41
343 345 7.006210 CGAACTTGCGTCATTATCTTGTTAAAC 59.994 37.037 0.00 0.00 0.00 2.01
356 358 6.060028 TCTTGTTAAACACATTGTCTCTGC 57.940 37.500 0.00 0.00 34.43 4.26
358 360 3.249799 TGTTAAACACATTGTCTCTGCGG 59.750 43.478 0.00 0.00 0.00 5.69
362 364 1.002430 ACACATTGTCTCTGCGGTGAT 59.998 47.619 0.00 0.00 0.00 3.06
363 365 1.395954 CACATTGTCTCTGCGGTGATG 59.604 52.381 0.00 0.00 0.00 3.07
369 371 1.589993 CTCTGCGGTGATGGTAGCG 60.590 63.158 0.00 0.00 43.78 4.26
372 374 2.183300 GCGGTGATGGTAGCGTGA 59.817 61.111 0.00 0.00 42.96 4.35
373 375 1.227263 GCGGTGATGGTAGCGTGAT 60.227 57.895 0.00 0.00 42.96 3.06
377 379 1.227234 TGATGGTAGCGTGATGGCG 60.227 57.895 0.00 0.00 38.18 5.69
382 384 1.134640 TGGTAGCGTGATGGCGTTTAT 60.135 47.619 0.00 0.00 38.18 1.40
384 386 2.470821 GTAGCGTGATGGCGTTTATCT 58.529 47.619 0.00 0.00 38.18 1.98
396 398 3.064134 GGCGTTTATCTCTTCTTGAAGGC 59.936 47.826 10.08 3.70 0.00 4.35
404 406 0.386478 CTTCTTGAAGGCGTTGCTGC 60.386 55.000 0.00 0.00 0.00 5.25
406 408 2.590291 TTGAAGGCGTTGCTGCGA 60.590 55.556 0.00 0.00 35.06 5.10
431 433 2.299521 AGTCGACATAGTCCTAGGTGC 58.700 52.381 19.50 3.27 29.43 5.01
437 439 4.083217 CGACATAGTCCTAGGTGCTACATC 60.083 50.000 9.08 11.72 29.43 3.06
438 440 4.804597 ACATAGTCCTAGGTGCTACATCA 58.195 43.478 9.08 0.00 0.00 3.07
439 441 5.398236 ACATAGTCCTAGGTGCTACATCAT 58.602 41.667 9.08 0.00 0.00 2.45
440 442 6.552932 ACATAGTCCTAGGTGCTACATCATA 58.447 40.000 9.08 0.00 0.00 2.15
441 443 7.185565 ACATAGTCCTAGGTGCTACATCATAT 58.814 38.462 9.08 0.00 0.00 1.78
442 444 7.340743 ACATAGTCCTAGGTGCTACATCATATC 59.659 40.741 9.08 0.00 0.00 1.63
443 445 5.898120 AGTCCTAGGTGCTACATCATATCT 58.102 41.667 9.08 0.00 0.00 1.98
445 447 6.210385 AGTCCTAGGTGCTACATCATATCTTG 59.790 42.308 9.08 0.00 0.00 3.02
446 448 6.015010 GTCCTAGGTGCTACATCATATCTTGT 60.015 42.308 9.08 0.00 0.00 3.16
447 449 6.209589 TCCTAGGTGCTACATCATATCTTGTC 59.790 42.308 9.08 0.00 0.00 3.18
448 450 6.210385 CCTAGGTGCTACATCATATCTTGTCT 59.790 42.308 0.00 0.00 0.00 3.41
449 451 6.095432 AGGTGCTACATCATATCTTGTCTC 57.905 41.667 0.00 0.00 0.00 3.36
450 452 4.920340 GGTGCTACATCATATCTTGTCTCG 59.080 45.833 0.00 0.00 0.00 4.04
453 455 7.362142 GGTGCTACATCATATCTTGTCTCGATA 60.362 40.741 0.00 0.00 0.00 2.92
470 472 7.228706 TGTCTCGATATCTGTCATAGTTGCTTA 59.771 37.037 0.34 0.00 0.00 3.09
505 507 6.169800 TCCATTTGTTGATGTTGTCTCGATA 58.830 36.000 0.00 0.00 0.00 2.92
544 546 4.380841 AAAATGGCTATGTGTGCATCAG 57.619 40.909 0.00 0.00 36.58 2.90
574 576 2.901042 CCGGAGGCTCCAACCTAC 59.099 66.667 31.69 4.48 46.14 3.18
580 582 2.347731 GAGGCTCCAACCTACTTTTCG 58.652 52.381 2.15 0.00 41.32 3.46
585 587 4.037089 GGCTCCAACCTACTTTTCGAAAAA 59.963 41.667 22.67 9.49 0.00 1.94
612 615 6.515272 AAAGGATAAACACGCTTGATTCAT 57.485 33.333 0.00 0.00 0.00 2.57
613 616 6.515272 AAGGATAAACACGCTTGATTCATT 57.485 33.333 0.00 0.00 0.00 2.57
614 617 5.883661 AGGATAAACACGCTTGATTCATTG 58.116 37.500 0.00 0.00 0.00 2.82
615 618 5.415701 AGGATAAACACGCTTGATTCATTGT 59.584 36.000 0.00 0.00 0.00 2.71
616 619 6.071952 AGGATAAACACGCTTGATTCATTGTT 60.072 34.615 0.00 0.00 0.00 2.83
617 620 6.033831 GGATAAACACGCTTGATTCATTGTTG 59.966 38.462 0.00 0.00 0.00 3.33
618 621 4.566545 AACACGCTTGATTCATTGTTGA 57.433 36.364 0.00 0.00 0.00 3.18
619 622 4.566545 ACACGCTTGATTCATTGTTGAA 57.433 36.364 0.00 0.00 45.57 2.69
620 623 4.930963 ACACGCTTGATTCATTGTTGAAA 58.069 34.783 0.00 0.00 44.70 2.69
621 624 4.739716 ACACGCTTGATTCATTGTTGAAAC 59.260 37.500 0.00 0.00 44.70 2.78
622 625 4.977963 CACGCTTGATTCATTGTTGAAACT 59.022 37.500 0.00 0.00 44.70 2.66
623 626 5.459762 CACGCTTGATTCATTGTTGAAACTT 59.540 36.000 0.00 0.00 44.70 2.66
624 627 6.019640 CACGCTTGATTCATTGTTGAAACTTT 60.020 34.615 0.00 0.00 44.70 2.66
625 628 7.167302 CACGCTTGATTCATTGTTGAAACTTTA 59.833 33.333 0.00 0.00 44.70 1.85
626 629 7.704472 ACGCTTGATTCATTGTTGAAACTTTAA 59.296 29.630 0.00 0.00 44.70 1.52
627 630 8.538856 CGCTTGATTCATTGTTGAAACTTTAAA 58.461 29.630 0.00 0.00 44.70 1.52
657 660 9.454859 TTTGAAGGGTTTTTCATTTAATTGTGT 57.545 25.926 0.00 0.00 36.97 3.72
658 661 8.655651 TGAAGGGTTTTTCATTTAATTGTGTC 57.344 30.769 0.00 0.00 32.39 3.67
659 662 7.713073 TGAAGGGTTTTTCATTTAATTGTGTCC 59.287 33.333 0.00 0.00 32.39 4.02
660 663 7.373617 AGGGTTTTTCATTTAATTGTGTCCT 57.626 32.000 0.00 0.00 0.00 3.85
661 664 7.441836 AGGGTTTTTCATTTAATTGTGTCCTC 58.558 34.615 0.00 0.00 0.00 3.71
662 665 6.364976 GGGTTTTTCATTTAATTGTGTCCTCG 59.635 38.462 0.00 0.00 0.00 4.63
663 666 6.128929 GGTTTTTCATTTAATTGTGTCCTCGC 60.129 38.462 0.00 0.00 0.00 5.03
664 667 4.335082 TTCATTTAATTGTGTCCTCGCG 57.665 40.909 0.00 0.00 0.00 5.87
665 668 2.095213 TCATTTAATTGTGTCCTCGCGC 59.905 45.455 0.00 0.00 0.00 6.86
666 669 0.440758 TTTAATTGTGTCCTCGCGCG 59.559 50.000 26.76 26.76 0.00 6.86
667 670 1.355796 TTAATTGTGTCCTCGCGCGG 61.356 55.000 31.69 20.19 0.00 6.46
671 674 4.814294 GTGTCCTCGCGCGGGATT 62.814 66.667 34.96 0.00 35.15 3.01
672 675 4.812476 TGTCCTCGCGCGGGATTG 62.812 66.667 34.96 15.65 35.15 2.67
673 676 4.508128 GTCCTCGCGCGGGATTGA 62.508 66.667 34.96 18.15 35.15 2.57
674 677 3.765578 TCCTCGCGCGGGATTGAA 61.766 61.111 34.96 8.34 0.00 2.69
675 678 3.564027 CCTCGCGCGGGATTGAAC 61.564 66.667 34.96 0.00 0.00 3.18
676 679 3.564027 CTCGCGCGGGATTGAACC 61.564 66.667 29.20 0.00 0.00 3.62
677 680 4.380781 TCGCGCGGGATTGAACCA 62.381 61.111 31.69 2.53 0.00 3.67
678 681 4.160635 CGCGCGGGATTGAACCAC 62.161 66.667 24.84 0.00 0.00 4.16
679 682 2.746277 GCGCGGGATTGAACCACT 60.746 61.111 8.83 0.00 0.00 4.00
680 683 3.039202 GCGCGGGATTGAACCACTG 62.039 63.158 8.83 0.00 0.00 3.66
681 684 2.877691 GCGGGATTGAACCACTGC 59.122 61.111 0.00 0.00 0.00 4.40
682 685 1.971167 GCGGGATTGAACCACTGCA 60.971 57.895 0.00 0.00 0.00 4.41
683 686 1.315257 GCGGGATTGAACCACTGCAT 61.315 55.000 0.00 0.00 0.00 3.96
684 687 2.016604 GCGGGATTGAACCACTGCATA 61.017 52.381 0.00 0.00 0.00 3.14
685 688 2.364632 CGGGATTGAACCACTGCATAA 58.635 47.619 0.00 0.00 0.00 1.90
686 689 2.752354 CGGGATTGAACCACTGCATAAA 59.248 45.455 0.00 0.00 0.00 1.40
687 690 3.381272 CGGGATTGAACCACTGCATAAAT 59.619 43.478 0.00 0.00 0.00 1.40
688 691 4.498009 CGGGATTGAACCACTGCATAAATC 60.498 45.833 0.00 0.00 0.00 2.17
689 692 4.402155 GGGATTGAACCACTGCATAAATCA 59.598 41.667 0.00 0.00 0.00 2.57
690 693 5.343249 GGATTGAACCACTGCATAAATCAC 58.657 41.667 0.00 0.00 0.00 3.06
691 694 4.418013 TTGAACCACTGCATAAATCACG 57.582 40.909 0.00 0.00 0.00 4.35
692 695 2.746904 TGAACCACTGCATAAATCACGG 59.253 45.455 0.00 0.00 0.00 4.94
693 696 1.750193 ACCACTGCATAAATCACGGG 58.250 50.000 0.00 0.00 0.00 5.28
694 697 1.024271 CCACTGCATAAATCACGGGG 58.976 55.000 0.00 0.00 0.00 5.73
695 698 0.381801 CACTGCATAAATCACGGGGC 59.618 55.000 0.00 0.00 0.00 5.80
696 699 0.034574 ACTGCATAAATCACGGGGCA 60.035 50.000 0.00 0.00 0.00 5.36
697 700 1.102154 CTGCATAAATCACGGGGCAA 58.898 50.000 0.00 0.00 0.00 4.52
698 701 1.476085 CTGCATAAATCACGGGGCAAA 59.524 47.619 0.00 0.00 0.00 3.68
699 702 1.895798 TGCATAAATCACGGGGCAAAA 59.104 42.857 0.00 0.00 0.00 2.44
700 703 2.499289 TGCATAAATCACGGGGCAAAAT 59.501 40.909 0.00 0.00 0.00 1.82
701 704 3.701542 TGCATAAATCACGGGGCAAAATA 59.298 39.130 0.00 0.00 0.00 1.40
702 705 4.160439 TGCATAAATCACGGGGCAAAATAA 59.840 37.500 0.00 0.00 0.00 1.40
703 706 4.744631 GCATAAATCACGGGGCAAAATAAG 59.255 41.667 0.00 0.00 0.00 1.73
704 707 2.959507 AATCACGGGGCAAAATAAGC 57.040 45.000 0.00 0.00 0.00 3.09
705 708 0.738389 ATCACGGGGCAAAATAAGCG 59.262 50.000 0.00 0.00 0.00 4.68
706 709 1.138671 CACGGGGCAAAATAAGCGG 59.861 57.895 0.00 0.00 0.00 5.52
707 710 2.049767 ACGGGGCAAAATAAGCGGG 61.050 57.895 0.00 0.00 0.00 6.13
708 711 2.499205 GGGGCAAAATAAGCGGGC 59.501 61.111 0.00 0.00 0.00 6.13
709 712 2.104132 GGGCAAAATAAGCGGGCG 59.896 61.111 0.00 0.00 0.00 6.13
710 713 2.411504 GGGCAAAATAAGCGGGCGA 61.412 57.895 0.00 0.00 0.00 5.54
711 714 1.226575 GGCAAAATAAGCGGGCGAC 60.227 57.895 0.00 0.00 0.00 5.19
713 716 1.061887 CAAAATAAGCGGGCGACGG 59.938 57.895 0.00 0.00 44.51 4.79
714 717 2.110352 AAAATAAGCGGGCGACGGG 61.110 57.895 0.00 0.00 44.51 5.28
715 718 2.524951 AAAATAAGCGGGCGACGGGA 62.525 55.000 0.00 0.00 44.51 5.14
716 719 3.728279 AATAAGCGGGCGACGGGAC 62.728 63.158 0.00 0.00 44.51 4.46
742 745 2.186903 CGAGTACCCCTGCGCATT 59.813 61.111 12.24 0.00 0.00 3.56
743 746 1.449601 CGAGTACCCCTGCGCATTT 60.450 57.895 12.24 0.00 0.00 2.32
744 747 1.429148 CGAGTACCCCTGCGCATTTC 61.429 60.000 12.24 0.21 0.00 2.17
745 748 0.107654 GAGTACCCCTGCGCATTTCT 60.108 55.000 12.24 3.88 0.00 2.52
746 749 0.392998 AGTACCCCTGCGCATTTCTG 60.393 55.000 12.24 0.00 0.00 3.02
747 750 1.748879 TACCCCTGCGCATTTCTGC 60.749 57.895 12.24 0.00 45.31 4.26
748 751 3.830192 CCCCTGCGCATTTCTGCC 61.830 66.667 12.24 0.00 46.07 4.85
749 752 4.183686 CCCTGCGCATTTCTGCCG 62.184 66.667 12.24 0.00 46.07 5.69
750 753 3.434319 CCTGCGCATTTCTGCCGT 61.434 61.111 12.24 0.00 46.07 5.68
751 754 2.562912 CTGCGCATTTCTGCCGTT 59.437 55.556 12.24 0.00 46.07 4.44
752 755 1.798725 CTGCGCATTTCTGCCGTTG 60.799 57.895 12.24 0.00 46.07 4.10
753 756 2.186350 CTGCGCATTTCTGCCGTTGA 62.186 55.000 12.24 0.00 46.07 3.18
754 757 1.137404 GCGCATTTCTGCCGTTGAT 59.863 52.632 0.30 0.00 46.07 2.57
755 758 0.456653 GCGCATTTCTGCCGTTGATT 60.457 50.000 0.30 0.00 46.07 2.57
756 759 1.538276 CGCATTTCTGCCGTTGATTC 58.462 50.000 0.00 0.00 46.07 2.52
757 760 1.135717 CGCATTTCTGCCGTTGATTCA 60.136 47.619 0.00 0.00 46.07 2.57
788 791 8.076178 GTCTCTCTCAATCTCTACTCTAAATGC 58.924 40.741 0.00 0.00 0.00 3.56
1125 1132 2.122989 TACCCGCCTCCATCTCCC 60.123 66.667 0.00 0.00 0.00 4.30
1130 1137 2.825264 GCCTCCATCTCCCTTCCG 59.175 66.667 0.00 0.00 0.00 4.30
1145 1152 3.193267 CCCTTCCGATCAATTTCTTTGCA 59.807 43.478 0.00 0.00 35.16 4.08
1146 1153 4.142093 CCCTTCCGATCAATTTCTTTGCAT 60.142 41.667 0.00 0.00 35.16 3.96
1147 1154 4.802039 CCTTCCGATCAATTTCTTTGCATG 59.198 41.667 0.00 0.00 35.16 4.06
1148 1155 3.772932 TCCGATCAATTTCTTTGCATGC 58.227 40.909 11.82 11.82 35.16 4.06
1200 1207 1.270094 TGTTGTGATCACCTGACCGAC 60.270 52.381 22.85 7.68 0.00 4.79
1373 1380 1.901085 GCTCCTCACCGACTCCAAT 59.099 57.895 0.00 0.00 0.00 3.16
1383 1390 1.372087 CGACTCCAATGCCTTGCTCC 61.372 60.000 0.00 0.00 0.00 4.70
1468 1475 3.256833 GGAATTGCCAATGCGCGC 61.257 61.111 27.26 27.26 41.78 6.86
1475 1482 2.816958 CCAATGCGCGCTCTGAGT 60.817 61.111 33.29 8.18 0.00 3.41
1487 1494 4.436050 CGCGCTCTGAGTTGTGATTTAATT 60.436 41.667 5.56 0.00 0.00 1.40
1686 1693 8.686334 TGAAGAGTTGATTAATTAATTGCTCCC 58.314 33.333 21.13 16.94 0.00 4.30
1891 1902 6.433404 CAGCAATCCTAGCAATCAATCCTATT 59.567 38.462 0.00 0.00 0.00 1.73
1927 1946 9.702494 CTGATTGCAGTCAAATCATCTATACTA 57.298 33.333 13.35 0.00 37.37 1.82
2141 2184 7.500629 ACTGATGCCATGTGGATCTATAATA 57.499 36.000 2.55 0.00 37.39 0.98
2270 2313 0.108804 ATCCTCACGTACGTGCCTTG 60.109 55.000 37.13 25.78 45.04 3.61
2271 2314 2.380410 CCTCACGTACGTGCCTTGC 61.380 63.158 37.13 0.00 45.04 4.01
2272 2315 1.663388 CTCACGTACGTGCCTTGCA 60.663 57.895 37.13 21.34 45.04 4.08
2295 2338 1.069296 TGCAGTGCTATTTCGTTGTGC 60.069 47.619 17.60 0.00 0.00 4.57
2296 2339 1.197721 GCAGTGCTATTTCGTTGTGCT 59.802 47.619 8.18 0.00 0.00 4.40
2299 2342 3.926527 CAGTGCTATTTCGTTGTGCTAGA 59.073 43.478 0.00 0.00 0.00 2.43
2301 2344 4.568359 AGTGCTATTTCGTTGTGCTAGATG 59.432 41.667 0.00 0.00 0.00 2.90
2303 2346 5.235186 GTGCTATTTCGTTGTGCTAGATGAT 59.765 40.000 0.00 0.00 0.00 2.45
2304 2347 5.463392 TGCTATTTCGTTGTGCTAGATGATC 59.537 40.000 0.00 0.00 0.00 2.92
2305 2348 5.463392 GCTATTTCGTTGTGCTAGATGATCA 59.537 40.000 0.00 0.00 0.00 2.92
2308 2351 4.926140 TCGTTGTGCTAGATGATCAGAT 57.074 40.909 0.09 0.00 0.00 2.90
2309 2352 4.614946 TCGTTGTGCTAGATGATCAGATG 58.385 43.478 0.09 0.00 0.00 2.90
2310 2353 4.339247 TCGTTGTGCTAGATGATCAGATGA 59.661 41.667 0.09 0.00 0.00 2.92
2311 2354 4.443725 CGTTGTGCTAGATGATCAGATGAC 59.556 45.833 0.09 0.00 0.00 3.06
2312 2355 4.597404 TGTGCTAGATGATCAGATGACC 57.403 45.455 0.09 0.00 0.00 4.02
2313 2356 3.962718 TGTGCTAGATGATCAGATGACCA 59.037 43.478 0.09 0.00 0.00 4.02
2318 2361 5.996513 GCTAGATGATCAGATGACCATTTGT 59.003 40.000 0.09 0.00 0.00 2.83
2320 2363 6.939132 AGATGATCAGATGACCATTTGTTC 57.061 37.500 0.09 3.49 0.00 3.18
2321 2364 5.526479 AGATGATCAGATGACCATTTGTTCG 59.474 40.000 0.09 0.00 29.32 3.95
2324 2367 5.122239 TGATCAGATGACCATTTGTTCGTTC 59.878 40.000 0.00 0.00 29.32 3.95
2327 2370 4.692625 CAGATGACCATTTGTTCGTTCTCT 59.307 41.667 0.00 0.00 0.00 3.10
2330 2373 4.703897 TGACCATTTGTTCGTTCTCTTCT 58.296 39.130 0.00 0.00 0.00 2.85
2335 2378 5.173854 CCATTTGTTCGTTCTCTTCTTTTGC 59.826 40.000 0.00 0.00 0.00 3.68
2363 2406 0.887387 ACAAATTACGGGCGTGCAGT 60.887 50.000 0.00 0.00 0.00 4.40
2366 2409 0.321298 AATTACGGGCGTGCAGTTCT 60.321 50.000 0.00 0.00 0.00 3.01
2393 2436 3.739810 ACATCTTGATGAGAATGATCGCG 59.260 43.478 16.43 0.00 38.06 5.87
2399 2442 3.006217 TGATGAGAATGATCGCGAGGAAT 59.994 43.478 16.66 4.95 28.17 3.01
2405 2448 1.290639 GATCGCGAGGAATCTCCCC 59.709 63.158 16.66 0.00 37.19 4.81
2420 2463 3.322466 CCCGCAGACTCAACCCCT 61.322 66.667 0.00 0.00 0.00 4.79
2423 2466 1.071471 CGCAGACTCAACCCCTGTT 59.929 57.895 0.00 0.00 34.14 3.16
2437 2480 2.171448 CCCCTGTTGAGAAGGTAGATGG 59.829 54.545 0.00 0.00 32.45 3.51
2442 2485 4.264253 TGTTGAGAAGGTAGATGGCATTG 58.736 43.478 0.00 0.00 0.00 2.82
2444 2487 2.507058 TGAGAAGGTAGATGGCATTGCT 59.493 45.455 8.82 0.00 0.00 3.91
2445 2488 2.877168 GAGAAGGTAGATGGCATTGCTG 59.123 50.000 8.82 0.00 0.00 4.41
2446 2489 2.507058 AGAAGGTAGATGGCATTGCTGA 59.493 45.455 8.82 0.00 0.00 4.26
2447 2490 2.634815 AGGTAGATGGCATTGCTGAG 57.365 50.000 8.82 0.00 0.00 3.35
2448 2491 1.842562 AGGTAGATGGCATTGCTGAGT 59.157 47.619 8.82 0.00 0.00 3.41
2449 2492 2.240667 AGGTAGATGGCATTGCTGAGTT 59.759 45.455 8.82 0.00 0.00 3.01
2450 2493 3.019564 GGTAGATGGCATTGCTGAGTTT 58.980 45.455 8.82 0.00 0.00 2.66
2451 2494 3.065925 GGTAGATGGCATTGCTGAGTTTC 59.934 47.826 8.82 0.00 0.00 2.78
2452 2495 2.799017 AGATGGCATTGCTGAGTTTCA 58.201 42.857 8.82 0.00 0.00 2.69
2453 2496 3.362706 AGATGGCATTGCTGAGTTTCAT 58.637 40.909 8.82 1.36 0.00 2.57
2456 2499 1.067425 GGCATTGCTGAGTTTCATGCA 60.067 47.619 8.82 0.00 35.48 3.96
2457 2500 2.259618 GCATTGCTGAGTTTCATGCAG 58.740 47.619 0.16 0.00 34.09 4.41
2462 2505 2.896243 CTGAGTTTCATGCAGCAGAC 57.104 50.000 0.00 0.00 0.00 3.51
2463 2506 2.148768 CTGAGTTTCATGCAGCAGACA 58.851 47.619 0.00 0.00 0.00 3.41
2477 2542 3.311871 CAGCAGACAATGATGGAAGCTAC 59.688 47.826 0.00 0.00 41.75 3.58
2478 2543 3.199508 AGCAGACAATGATGGAAGCTACT 59.800 43.478 0.00 0.00 31.79 2.57
2479 2544 3.559242 GCAGACAATGATGGAAGCTACTC 59.441 47.826 0.00 0.00 0.00 2.59
2480 2545 4.763073 CAGACAATGATGGAAGCTACTCA 58.237 43.478 0.00 0.00 0.00 3.41
2484 2549 6.150140 AGACAATGATGGAAGCTACTCAAAAC 59.850 38.462 0.00 0.00 0.00 2.43
2500 2565 9.961265 CTACTCAAAACGTATATGATTCACCTA 57.039 33.333 0.00 0.00 0.00 3.08
2521 2586 5.820423 CCTATAGGTCATGACTCTAGATCCG 59.180 48.000 24.50 10.02 0.00 4.18
2548 2613 3.958822 GACGGTCGACACGCCGATT 62.959 63.158 18.91 2.29 44.39 3.34
2572 2637 0.035152 ATGCTCTCCGGACAATGCAA 60.035 50.000 16.33 4.72 34.07 4.08
2613 2678 0.460311 CCCGTGATGGACAGAGGTAC 59.540 60.000 0.00 0.00 42.00 3.34
2667 2735 5.675684 TGGCAACTTGTCACTCAGATATA 57.324 39.130 0.00 0.00 37.61 0.86
2673 2741 9.098355 GCAACTTGTCACTCAGATATAACATAA 57.902 33.333 0.00 0.00 0.00 1.90
2707 2775 2.131776 TTTCACCGTCTGTTTTGGGT 57.868 45.000 0.00 0.00 0.00 4.51
2712 2780 1.420138 ACCGTCTGTTTTGGGTCAGAT 59.580 47.619 0.00 0.00 41.67 2.90
2836 2908 3.317711 CGAGATGTCTCCTACTGATTGCT 59.682 47.826 4.54 0.00 39.79 3.91
2838 2910 4.285020 AGATGTCTCCTACTGATTGCTCA 58.715 43.478 0.00 0.00 0.00 4.26
2986 3063 1.671379 GCGACCAGGTCCCAGTTTC 60.671 63.158 14.46 0.00 0.00 2.78
2987 3064 2.058675 CGACCAGGTCCCAGTTTCT 58.941 57.895 14.46 0.00 0.00 2.52
2988 3065 0.396811 CGACCAGGTCCCAGTTTCTT 59.603 55.000 14.46 0.00 0.00 2.52
2989 3066 1.202770 CGACCAGGTCCCAGTTTCTTT 60.203 52.381 14.46 0.00 0.00 2.52
2990 3067 2.748465 CGACCAGGTCCCAGTTTCTTTT 60.748 50.000 14.46 0.00 0.00 2.27
2991 3068 3.495453 CGACCAGGTCCCAGTTTCTTTTA 60.495 47.826 14.46 0.00 0.00 1.52
2992 3069 4.072839 GACCAGGTCCCAGTTTCTTTTAG 58.927 47.826 8.65 0.00 0.00 1.85
2993 3070 3.720002 ACCAGGTCCCAGTTTCTTTTAGA 59.280 43.478 0.00 0.00 0.00 2.10
2994 3071 4.202472 ACCAGGTCCCAGTTTCTTTTAGAG 60.202 45.833 0.00 0.00 0.00 2.43
2995 3072 4.041691 CCAGGTCCCAGTTTCTTTTAGAGA 59.958 45.833 0.00 0.00 0.00 3.10
2996 3073 5.456186 CCAGGTCCCAGTTTCTTTTAGAGAA 60.456 44.000 0.00 0.00 42.56 2.87
2997 3074 5.703130 CAGGTCCCAGTTTCTTTTAGAGAAG 59.297 44.000 0.00 0.00 44.80 2.85
2998 3075 5.004448 GGTCCCAGTTTCTTTTAGAGAAGG 58.996 45.833 0.00 0.00 44.80 3.46
2999 3076 5.221864 GGTCCCAGTTTCTTTTAGAGAAGGA 60.222 44.000 0.00 0.00 44.80 3.36
3000 3077 5.935206 GTCCCAGTTTCTTTTAGAGAAGGAG 59.065 44.000 0.00 0.00 44.80 3.69
3001 3078 5.013183 TCCCAGTTTCTTTTAGAGAAGGAGG 59.987 44.000 0.00 0.00 44.80 4.30
3002 3079 4.697828 CCAGTTTCTTTTAGAGAAGGAGGC 59.302 45.833 0.00 0.00 44.80 4.70
3003 3080 4.390297 CAGTTTCTTTTAGAGAAGGAGGCG 59.610 45.833 0.00 0.00 44.80 5.52
3004 3081 4.283722 AGTTTCTTTTAGAGAAGGAGGCGA 59.716 41.667 0.00 0.00 44.80 5.54
3005 3082 3.870633 TCTTTTAGAGAAGGAGGCGAC 57.129 47.619 0.00 0.00 0.00 5.19
3006 3083 2.496470 TCTTTTAGAGAAGGAGGCGACC 59.504 50.000 0.00 0.00 0.00 4.79
3007 3084 1.933021 TTTAGAGAAGGAGGCGACCA 58.067 50.000 6.55 0.00 0.00 4.02
3008 3085 1.475403 TTAGAGAAGGAGGCGACCAG 58.525 55.000 6.55 0.00 0.00 4.00
3009 3086 0.395862 TAGAGAAGGAGGCGACCAGG 60.396 60.000 6.55 0.00 0.00 4.45
3010 3087 1.985116 GAGAAGGAGGCGACCAGGT 60.985 63.158 0.00 0.00 0.00 4.00
3011 3088 1.950973 GAGAAGGAGGCGACCAGGTC 61.951 65.000 9.92 9.92 0.00 3.85
3012 3089 3.003763 AAGGAGGCGACCAGGTCC 61.004 66.667 14.46 6.76 0.00 4.46
3015 3092 3.775654 GAGGCGACCAGGTCCCAG 61.776 72.222 22.53 8.76 0.00 4.45
3016 3093 4.640690 AGGCGACCAGGTCCCAGT 62.641 66.667 22.53 6.50 0.00 4.00
3017 3094 3.637273 GGCGACCAGGTCCCAGTT 61.637 66.667 14.46 0.00 0.00 3.16
3018 3095 2.430367 GCGACCAGGTCCCAGTTT 59.570 61.111 14.46 0.00 0.00 2.66
3019 3096 1.671379 GCGACCAGGTCCCAGTTTC 60.671 63.158 14.46 0.00 0.00 2.78
3024 3101 3.495453 CGACCAGGTCCCAGTTTCTTTTA 60.495 47.826 14.46 0.00 0.00 1.52
3027 3104 4.202472 ACCAGGTCCCAGTTTCTTTTAGAG 60.202 45.833 0.00 0.00 0.00 2.43
3033 3110 6.296803 GTCCCAGTTTCTTTTAGAGAAGGAA 58.703 40.000 0.00 0.00 44.80 3.36
3037 3114 5.696724 CAGTTTCTTTTAGAGAAGGAAGCGA 59.303 40.000 0.00 0.00 44.80 4.93
3060 3137 0.830648 GGTCCCAGATGATGTCCGAA 59.169 55.000 0.00 0.00 0.00 4.30
3168 3245 2.877582 GGTACGTACGTGCTGCCG 60.878 66.667 30.65 8.60 0.00 5.69
3203 3282 1.000646 TGTTCGCCCCCATTAACCC 60.001 57.895 0.00 0.00 0.00 4.11
3207 3286 2.833121 GCCCCCATTAACCCGCTG 60.833 66.667 0.00 0.00 0.00 5.18
3210 3289 1.823899 CCCCATTAACCCGCTGCTC 60.824 63.158 0.00 0.00 0.00 4.26
3338 3417 0.602638 TGGTGAGTGGTTCATCACGC 60.603 55.000 0.00 0.00 41.98 5.34
3339 3418 1.626654 GGTGAGTGGTTCATCACGCG 61.627 60.000 3.53 3.53 45.45 6.01
3367 3446 4.038271 ACATGTGATGATGAAACTGGGT 57.962 40.909 0.00 0.00 0.00 4.51
3404 3483 1.153901 CCCAGCTGGTACGTACGTG 60.154 63.158 30.63 14.77 0.00 4.49
3425 3504 1.269361 TGCTTGCAGTACGAAGACGAA 60.269 47.619 0.00 0.00 42.66 3.85
3533 3612 2.385777 TGGATCCACCAGCATCACA 58.614 52.632 11.44 0.00 44.64 3.58
3544 3623 3.701040 ACCAGCATCACAAAACTTGTTCT 59.299 39.130 0.00 0.00 43.23 3.01
3545 3624 4.202050 ACCAGCATCACAAAACTTGTTCTC 60.202 41.667 0.00 0.00 43.23 2.87
3567 3646 0.744281 CAGCCGGTTTGGTTTGAACT 59.256 50.000 1.90 0.00 41.21 3.01
3568 3647 1.136110 CAGCCGGTTTGGTTTGAACTT 59.864 47.619 1.90 0.00 41.21 2.66
3569 3648 1.828595 AGCCGGTTTGGTTTGAACTTT 59.171 42.857 1.90 0.00 41.21 2.66
3570 3649 1.930503 GCCGGTTTGGTTTGAACTTTG 59.069 47.619 1.90 0.00 41.21 2.77
3571 3650 2.417515 GCCGGTTTGGTTTGAACTTTGA 60.418 45.455 1.90 0.00 41.21 2.69
3572 3651 3.851098 CCGGTTTGGTTTGAACTTTGAA 58.149 40.909 0.00 0.00 0.00 2.69
3573 3652 4.438148 CCGGTTTGGTTTGAACTTTGAAT 58.562 39.130 0.00 0.00 0.00 2.57
3632 3714 3.582647 TCTTCTTGGATTACTCTGGCACA 59.417 43.478 0.00 0.00 0.00 4.57
3638 3720 2.536997 ATTACTCTGGCACACCGGGC 62.537 60.000 6.32 0.00 43.29 6.13
3658 3740 1.743321 CGGAGAAGCCTGGCCTCTAG 61.743 65.000 19.39 12.74 28.61 2.43
3767 3849 0.391966 GCCTCGGGGTAATGGTCTAC 59.608 60.000 1.62 0.00 34.45 2.59
3804 3886 5.533903 GGCTAGCTGTACTTACCATGTAGTA 59.466 44.000 15.72 0.00 0.00 1.82
3838 3921 6.207417 TCCCATGTGAAAAGAAAACATCTCTC 59.793 38.462 0.00 0.00 37.42 3.20
3880 3963 4.379813 CGGTGAGGTTTGGATCTTCATTTG 60.380 45.833 0.00 0.00 0.00 2.32
3897 3981 5.198207 TCATTTGAGGTAGATACACCGAGA 58.802 41.667 0.00 0.00 43.84 4.04
3938 4022 1.607713 CTCACGCAACGTCTACTCAG 58.392 55.000 0.00 0.00 38.32 3.35
3983 4067 5.526846 CCTACATCTCCAGAAATGAAGAAGC 59.473 44.000 0.00 0.00 0.00 3.86
4057 4143 5.239744 TCAGGCTTTAACAAAACGCATAGAA 59.760 36.000 0.00 0.00 0.00 2.10
4075 4161 3.458189 AGAACGTCAAACAGAGGAGTTG 58.542 45.455 0.00 0.00 36.06 3.16
4076 4162 3.132289 AGAACGTCAAACAGAGGAGTTGA 59.868 43.478 0.00 0.00 36.06 3.18
4077 4163 3.536956 ACGTCAAACAGAGGAGTTGAA 57.463 42.857 0.00 0.00 36.06 2.69
4078 4164 3.869065 ACGTCAAACAGAGGAGTTGAAA 58.131 40.909 0.00 0.00 36.06 2.69
4079 4165 3.621715 ACGTCAAACAGAGGAGTTGAAAC 59.378 43.478 0.00 0.00 36.06 2.78
4080 4166 3.871594 CGTCAAACAGAGGAGTTGAAACT 59.128 43.478 0.00 0.00 43.16 2.66
4081 4167 4.332819 CGTCAAACAGAGGAGTTGAAACTT 59.667 41.667 0.00 0.00 39.88 2.66
4082 4168 5.573146 GTCAAACAGAGGAGTTGAAACTTG 58.427 41.667 0.00 0.00 39.88 3.16
4083 4169 4.640201 TCAAACAGAGGAGTTGAAACTTGG 59.360 41.667 0.00 0.00 39.88 3.61
4084 4170 3.933861 ACAGAGGAGTTGAAACTTGGT 57.066 42.857 0.00 0.00 39.88 3.67
4085 4171 3.545703 ACAGAGGAGTTGAAACTTGGTG 58.454 45.455 0.00 0.00 39.88 4.17
4086 4172 2.880890 CAGAGGAGTTGAAACTTGGTGG 59.119 50.000 0.00 0.00 39.88 4.61
4087 4173 2.158608 AGAGGAGTTGAAACTTGGTGGG 60.159 50.000 0.00 0.00 39.88 4.61
4088 4174 1.569072 AGGAGTTGAAACTTGGTGGGT 59.431 47.619 0.00 0.00 39.88 4.51
4089 4175 1.681264 GGAGTTGAAACTTGGTGGGTG 59.319 52.381 0.00 0.00 39.88 4.61
4090 4176 1.681264 GAGTTGAAACTTGGTGGGTGG 59.319 52.381 0.00 0.00 39.88 4.61
4091 4177 0.750249 GTTGAAACTTGGTGGGTGGG 59.250 55.000 0.00 0.00 0.00 4.61
4092 4178 0.336737 TTGAAACTTGGTGGGTGGGT 59.663 50.000 0.00 0.00 0.00 4.51
4093 4179 0.336737 TGAAACTTGGTGGGTGGGTT 59.663 50.000 0.00 0.00 0.00 4.11
4094 4180 0.750249 GAAACTTGGTGGGTGGGTTG 59.250 55.000 0.00 0.00 0.00 3.77
4095 4181 0.689412 AAACTTGGTGGGTGGGTTGG 60.689 55.000 0.00 0.00 0.00 3.77
4096 4182 1.881057 AACTTGGTGGGTGGGTTGGT 61.881 55.000 0.00 0.00 0.00 3.67
4097 4183 1.075600 CTTGGTGGGTGGGTTGGTT 60.076 57.895 0.00 0.00 0.00 3.67
4098 4184 0.689412 CTTGGTGGGTGGGTTGGTTT 60.689 55.000 0.00 0.00 0.00 3.27
4099 4185 0.978146 TTGGTGGGTGGGTTGGTTTG 60.978 55.000 0.00 0.00 0.00 2.93
4100 4186 1.382009 GGTGGGTGGGTTGGTTTGT 60.382 57.895 0.00 0.00 0.00 2.83
4101 4187 0.978667 GGTGGGTGGGTTGGTTTGTT 60.979 55.000 0.00 0.00 0.00 2.83
4102 4188 0.906066 GTGGGTGGGTTGGTTTGTTT 59.094 50.000 0.00 0.00 0.00 2.83
4103 4189 1.134640 GTGGGTGGGTTGGTTTGTTTC 60.135 52.381 0.00 0.00 0.00 2.78
4104 4190 1.196012 GGGTGGGTTGGTTTGTTTCA 58.804 50.000 0.00 0.00 0.00 2.69
4105 4191 1.555533 GGGTGGGTTGGTTTGTTTCAA 59.444 47.619 0.00 0.00 0.00 2.69
4106 4192 2.027100 GGGTGGGTTGGTTTGTTTCAAA 60.027 45.455 0.00 0.00 0.00 2.69
4107 4193 3.559384 GGGTGGGTTGGTTTGTTTCAAAA 60.559 43.478 0.00 0.00 0.00 2.44
4108 4194 4.072839 GGTGGGTTGGTTTGTTTCAAAAA 58.927 39.130 0.00 0.00 0.00 1.94
4147 4233 1.177401 GTTGGGGGTTCATCTTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
4152 4238 2.115291 GGTTCATCTTGCTCCGCCC 61.115 63.158 0.00 0.00 0.00 6.13
4153 4239 1.078143 GTTCATCTTGCTCCGCCCT 60.078 57.895 0.00 0.00 0.00 5.19
4176 4262 3.684788 GGTCCACACAAGTGCTACATAAG 59.315 47.826 0.00 0.00 44.53 1.73
4177 4263 4.562757 GGTCCACACAAGTGCTACATAAGA 60.563 45.833 0.00 0.00 44.53 2.10
4178 4264 4.627467 GTCCACACAAGTGCTACATAAGAG 59.373 45.833 0.00 0.00 44.53 2.85
4179 4265 3.372206 CCACACAAGTGCTACATAAGAGC 59.628 47.826 0.00 0.00 44.53 4.09
4188 4274 5.852282 TGCTACATAAGAGCAGACATACA 57.148 39.130 0.00 0.00 44.89 2.29
4189 4275 6.220726 TGCTACATAAGAGCAGACATACAA 57.779 37.500 0.00 0.00 44.89 2.41
4190 4276 6.639563 TGCTACATAAGAGCAGACATACAAA 58.360 36.000 0.00 0.00 44.89 2.83
4191 4277 7.275183 TGCTACATAAGAGCAGACATACAAAT 58.725 34.615 0.00 0.00 44.89 2.32
4192 4278 7.439356 TGCTACATAAGAGCAGACATACAAATC 59.561 37.037 0.00 0.00 44.89 2.17
4193 4279 7.095439 GCTACATAAGAGCAGACATACAAATCC 60.095 40.741 0.00 0.00 39.84 3.01
4194 4280 6.653020 ACATAAGAGCAGACATACAAATCCA 58.347 36.000 0.00 0.00 0.00 3.41
4195 4281 6.765036 ACATAAGAGCAGACATACAAATCCAG 59.235 38.462 0.00 0.00 0.00 3.86
4196 4282 4.148128 AGAGCAGACATACAAATCCAGG 57.852 45.455 0.00 0.00 0.00 4.45
4197 4283 2.615912 GAGCAGACATACAAATCCAGGC 59.384 50.000 0.00 0.00 0.00 4.85
4198 4284 1.678101 GCAGACATACAAATCCAGGCC 59.322 52.381 0.00 0.00 0.00 5.19
4199 4285 2.301346 CAGACATACAAATCCAGGCCC 58.699 52.381 0.00 0.00 0.00 5.80
4200 4286 2.092212 CAGACATACAAATCCAGGCCCT 60.092 50.000 0.00 0.00 0.00 5.19
4201 4287 2.173569 AGACATACAAATCCAGGCCCTC 59.826 50.000 0.00 0.00 0.00 4.30
4202 4288 1.922447 ACATACAAATCCAGGCCCTCA 59.078 47.619 0.00 0.00 0.00 3.86
4203 4289 2.311542 ACATACAAATCCAGGCCCTCAA 59.688 45.455 0.00 0.00 0.00 3.02
4204 4290 3.245586 ACATACAAATCCAGGCCCTCAAA 60.246 43.478 0.00 0.00 0.00 2.69
4205 4291 1.632589 ACAAATCCAGGCCCTCAAAC 58.367 50.000 0.00 0.00 0.00 2.93
4206 4292 0.527565 CAAATCCAGGCCCTCAAACG 59.472 55.000 0.00 0.00 0.00 3.60
4207 4293 1.250840 AAATCCAGGCCCTCAAACGC 61.251 55.000 0.00 0.00 0.00 4.84
4208 4294 3.645268 ATCCAGGCCCTCAAACGCC 62.645 63.158 0.00 0.00 46.09 5.68
4212 4298 2.274104 GGCCCTCAAACGCCCATA 59.726 61.111 0.00 0.00 39.39 2.74
4213 4299 1.823899 GGCCCTCAAACGCCCATAG 60.824 63.158 0.00 0.00 39.39 2.23
4214 4300 1.223487 GCCCTCAAACGCCCATAGA 59.777 57.895 0.00 0.00 0.00 1.98
4215 4301 1.095807 GCCCTCAAACGCCCATAGAC 61.096 60.000 0.00 0.00 0.00 2.59
4216 4302 0.810031 CCCTCAAACGCCCATAGACG 60.810 60.000 0.00 0.00 0.00 4.18
4217 4303 0.108329 CCTCAAACGCCCATAGACGT 60.108 55.000 0.00 0.00 46.07 4.34
4218 4304 0.999406 CTCAAACGCCCATAGACGTG 59.001 55.000 0.00 0.00 42.68 4.49
4219 4305 1.017177 TCAAACGCCCATAGACGTGC 61.017 55.000 0.00 0.00 42.68 5.34
4220 4306 1.743995 AAACGCCCATAGACGTGCC 60.744 57.895 0.00 0.00 42.68 5.01
4221 4307 2.180159 AAACGCCCATAGACGTGCCT 62.180 55.000 0.00 0.00 42.68 4.75
4222 4308 2.586079 CGCCCATAGACGTGCCTG 60.586 66.667 0.00 0.00 0.00 4.85
4223 4309 2.900273 GCCCATAGACGTGCCTGA 59.100 61.111 0.00 0.00 0.00 3.86
4224 4310 1.521681 GCCCATAGACGTGCCTGAC 60.522 63.158 0.00 0.00 0.00 3.51
4225 4311 1.897423 CCCATAGACGTGCCTGACA 59.103 57.895 0.00 0.00 0.00 3.58
4226 4312 0.465705 CCCATAGACGTGCCTGACAT 59.534 55.000 0.00 0.00 0.00 3.06
4227 4313 1.134401 CCCATAGACGTGCCTGACATT 60.134 52.381 0.00 0.00 0.00 2.71
4228 4314 1.935873 CCATAGACGTGCCTGACATTG 59.064 52.381 0.00 0.00 0.00 2.82
4229 4315 2.418609 CCATAGACGTGCCTGACATTGA 60.419 50.000 0.00 0.00 0.00 2.57
4230 4316 2.363788 TAGACGTGCCTGACATTGAC 57.636 50.000 0.00 0.00 0.00 3.18
4231 4317 0.320771 AGACGTGCCTGACATTGACC 60.321 55.000 0.00 0.00 0.00 4.02
4232 4318 1.626654 GACGTGCCTGACATTGACCG 61.627 60.000 0.00 0.00 0.00 4.79
4239 4325 0.523072 CTGACATTGACCGGGCTTTG 59.477 55.000 9.82 8.91 0.00 2.77
4304 4390 2.934107 TGCAAAGCTACGTAAACACG 57.066 45.000 0.00 0.00 39.31 4.49
4306 4392 3.379240 TGCAAAGCTACGTAAACACGTA 58.621 40.909 9.41 9.41 45.19 3.57
4307 4393 3.801050 TGCAAAGCTACGTAAACACGTAA 59.199 39.130 10.78 0.00 46.08 3.18
4309 4395 4.604368 GCAAAGCTACGTAAACACGTAAAC 59.396 41.667 10.78 6.68 46.08 2.01
4310 4396 5.726245 CAAAGCTACGTAAACACGTAAACA 58.274 37.500 10.78 0.00 46.08 2.83
4313 4399 4.803088 AGCTACGTAAACACGTAAACACAA 59.197 37.500 10.78 0.00 46.08 3.33
4314 4400 5.463061 AGCTACGTAAACACGTAAACACAAT 59.537 36.000 10.78 0.00 46.08 2.71
4315 4401 5.780269 GCTACGTAAACACGTAAACACAATC 59.220 40.000 10.78 0.00 46.08 2.67
4316 4402 5.715429 ACGTAAACACGTAAACACAATCA 57.285 34.783 0.21 0.00 45.19 2.57
4371 4457 3.057526 GCCGGACAAAAGAAGCATAGTTT 60.058 43.478 5.05 0.00 0.00 2.66
4461 4556 1.824852 GGCGGAGGAAATCACCATTTT 59.175 47.619 0.00 0.00 31.94 1.82
4495 4590 4.052229 CCTTCTGGTCGTCGGCGT 62.052 66.667 10.18 0.00 39.49 5.68
4518 4614 2.682494 TGCCCCTCCTCCGTGTAC 60.682 66.667 0.00 0.00 0.00 2.90
4524 4620 2.669229 TCCTCCGTGTACGCGTCA 60.669 61.111 25.62 11.51 38.18 4.35
4578 4674 2.711922 GGAGCCGTCCGTCATGTCT 61.712 63.158 0.00 0.00 31.37 3.41
4579 4675 1.381928 GGAGCCGTCCGTCATGTCTA 61.382 60.000 0.00 0.00 31.37 2.59
4600 4696 2.267006 CGGAGCTGCACCTCATGT 59.733 61.111 14.15 0.00 33.47 3.21
4611 4707 0.324368 ACCTCATGTCCGACAGCCTA 60.324 55.000 7.41 0.00 0.00 3.93
4613 4709 0.817654 CTCATGTCCGACAGCCTACA 59.182 55.000 7.41 0.00 0.00 2.74
4614 4710 1.204704 CTCATGTCCGACAGCCTACAA 59.795 52.381 7.41 0.00 0.00 2.41
4636 4732 3.706373 GGCGGTCCTGCTCCTTCA 61.706 66.667 5.82 0.00 34.52 3.02
4729 4825 0.682209 AAGCGCCATGGCATTCTTCT 60.682 50.000 34.93 17.88 42.06 2.85
4730 4826 0.181114 AGCGCCATGGCATTCTTCTA 59.819 50.000 34.93 0.00 42.06 2.10
4733 4829 1.683943 GCCATGGCATTCTTCTAGCA 58.316 50.000 32.08 0.00 41.49 3.49
4759 4855 3.060000 ACGCATCCGTCTCCGTCA 61.060 61.111 0.00 0.00 46.39 4.35
4771 4867 1.066071 TCTCCGTCATCGTCAGAGAGT 60.066 52.381 0.00 0.00 31.83 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.678336 GTCCTTCCTATGAACAAAGGCG 59.322 50.000 0.00 0.00 38.52 5.52
8 9 2.354704 CCAGCGTCCTTCCTATGAACAA 60.355 50.000 0.00 0.00 0.00 2.83
26 27 0.108138 CTCTAAGACCGTTGCCCCAG 60.108 60.000 0.00 0.00 0.00 4.45
37 38 7.553334 TGTAACATCCACCATAACTCTAAGAC 58.447 38.462 0.00 0.00 0.00 3.01
38 39 7.727578 TGTAACATCCACCATAACTCTAAGA 57.272 36.000 0.00 0.00 0.00 2.10
41 42 9.391006 GATTTTGTAACATCCACCATAACTCTA 57.609 33.333 0.00 0.00 0.00 2.43
82 83 2.887568 CTAGCCGCTGCCACTTCG 60.888 66.667 2.16 0.00 38.69 3.79
87 88 2.265739 CAGAACTAGCCGCTGCCA 59.734 61.111 2.16 0.00 38.69 4.92
92 93 3.188786 CGGTGCAGAACTAGCCGC 61.189 66.667 0.00 0.00 35.90 6.53
93 94 3.188786 GCGGTGCAGAACTAGCCG 61.189 66.667 5.37 5.37 44.60 5.52
96 97 3.188786 GCCGCGGTGCAGAACTAG 61.189 66.667 28.70 0.00 0.00 2.57
120 121 1.739338 ATCGTGTCCATCGAGAGGCC 61.739 60.000 0.00 0.00 40.57 5.19
126 127 5.453567 AAGATCATTATCGTGTCCATCGA 57.546 39.130 0.00 0.00 41.45 3.59
130 131 4.875536 CACCAAAGATCATTATCGTGTCCA 59.124 41.667 0.00 0.00 37.19 4.02
132 133 4.273480 CCCACCAAAGATCATTATCGTGTC 59.727 45.833 0.00 0.00 37.19 3.67
133 134 4.199310 CCCACCAAAGATCATTATCGTGT 58.801 43.478 0.00 0.00 37.19 4.49
153 154 1.529244 GGGTGCAGGATGTATGCCC 60.529 63.158 0.00 0.00 43.18 5.36
165 166 1.195115 GACACTAGGAGATGGGTGCA 58.805 55.000 0.00 0.00 33.53 4.57
166 167 1.137872 CTGACACTAGGAGATGGGTGC 59.862 57.143 0.00 0.00 33.53 5.01
176 177 2.065899 AGGCTAGAGCTGACACTAGG 57.934 55.000 8.74 0.00 37.51 3.02
183 184 1.133356 TCCATGCTAGGCTAGAGCTGA 60.133 52.381 25.37 12.07 40.76 4.26
186 187 1.626686 TCTCCATGCTAGGCTAGAGC 58.373 55.000 25.37 14.03 40.53 4.09
191 192 0.749649 CGAGTTCTCCATGCTAGGCT 59.250 55.000 0.00 0.00 0.00 4.58
209 210 2.095212 TCTTCCGACAGTCACATCTTCG 60.095 50.000 0.41 0.00 0.00 3.79
211 212 3.511540 TGATCTTCCGACAGTCACATCTT 59.488 43.478 0.41 0.00 0.00 2.40
221 222 0.684535 TGGCAACTGATCTTCCGACA 59.315 50.000 0.00 0.00 37.61 4.35
250 251 1.593006 CCGGATATGAAGCGTGTTGAC 59.407 52.381 0.00 0.00 0.00 3.18
258 260 2.222027 CTTTCACCCCGGATATGAAGC 58.778 52.381 0.73 0.00 34.04 3.86
279 281 1.007387 GCAAACGCCAGAACAAGGG 60.007 57.895 0.00 0.00 0.00 3.95
283 285 1.444119 GACCAGCAAACGCCAGAACA 61.444 55.000 0.00 0.00 0.00 3.18
304 306 2.126071 GTTCGCCGCTGCTGAGTA 60.126 61.111 0.00 0.00 34.43 2.59
324 326 7.537306 ACAATGTGTTTAACAAGATAATGACGC 59.463 33.333 0.00 0.00 43.61 5.19
325 327 8.948853 ACAATGTGTTTAACAAGATAATGACG 57.051 30.769 0.00 0.00 43.61 4.35
340 342 1.603802 CACCGCAGAGACAATGTGTTT 59.396 47.619 0.00 0.00 0.00 2.83
343 345 1.395954 CATCACCGCAGAGACAATGTG 59.604 52.381 0.00 0.00 0.00 3.21
354 356 1.955495 ATCACGCTACCATCACCGCA 61.955 55.000 0.00 0.00 0.00 5.69
356 358 0.875908 CCATCACGCTACCATCACCG 60.876 60.000 0.00 0.00 0.00 4.94
358 360 1.490693 CGCCATCACGCTACCATCAC 61.491 60.000 0.00 0.00 0.00 3.06
362 364 0.246910 TAAACGCCATCACGCTACCA 59.753 50.000 0.00 0.00 36.19 3.25
363 365 1.525619 GATAAACGCCATCACGCTACC 59.474 52.381 0.00 0.00 36.19 3.18
369 371 4.870426 TCAAGAAGAGATAAACGCCATCAC 59.130 41.667 0.00 0.00 0.00 3.06
372 374 4.878397 CCTTCAAGAAGAGATAAACGCCAT 59.122 41.667 11.25 0.00 40.79 4.40
373 375 4.253685 CCTTCAAGAAGAGATAAACGCCA 58.746 43.478 11.25 0.00 40.79 5.69
377 379 5.622378 CAACGCCTTCAAGAAGAGATAAAC 58.378 41.667 11.25 0.00 40.79 2.01
382 384 1.070758 AGCAACGCCTTCAAGAAGAGA 59.929 47.619 11.25 0.00 40.79 3.10
384 386 1.229428 CAGCAACGCCTTCAAGAAGA 58.771 50.000 11.25 0.00 40.79 2.87
396 398 0.449507 CGACTTCTTTCGCAGCAACG 60.450 55.000 0.00 0.00 31.03 4.10
404 406 4.358494 AGGACTATGTCGACTTCTTTCG 57.642 45.455 17.92 1.02 40.53 3.46
406 408 5.125739 CACCTAGGACTATGTCGACTTCTTT 59.874 44.000 17.98 0.00 32.65 2.52
431 433 9.934190 CAGATATCGAGACAAGATATGATGTAG 57.066 37.037 3.75 0.00 40.30 2.74
437 439 9.934190 CTATGACAGATATCGAGACAAGATATG 57.066 37.037 3.75 0.00 40.30 1.78
438 440 9.679661 ACTATGACAGATATCGAGACAAGATAT 57.320 33.333 0.00 0.00 42.20 1.63
439 441 9.508642 AACTATGACAGATATCGAGACAAGATA 57.491 33.333 0.00 0.00 35.36 1.98
440 442 7.994425 ACTATGACAGATATCGAGACAAGAT 57.006 36.000 0.00 0.00 0.00 2.40
441 443 7.643579 CAACTATGACAGATATCGAGACAAGA 58.356 38.462 0.00 0.00 0.00 3.02
442 444 6.362016 GCAACTATGACAGATATCGAGACAAG 59.638 42.308 0.00 4.88 0.00 3.16
443 445 6.039829 AGCAACTATGACAGATATCGAGACAA 59.960 38.462 0.00 0.00 0.00 3.18
445 447 6.007936 AGCAACTATGACAGATATCGAGAC 57.992 41.667 0.00 0.00 0.00 3.36
446 448 6.641169 AAGCAACTATGACAGATATCGAGA 57.359 37.500 0.00 0.00 0.00 4.04
447 449 8.026026 ACATAAGCAACTATGACAGATATCGAG 58.974 37.037 7.30 0.00 34.07 4.04
448 450 7.886338 ACATAAGCAACTATGACAGATATCGA 58.114 34.615 7.30 0.00 34.07 3.59
449 451 8.526218 AACATAAGCAACTATGACAGATATCG 57.474 34.615 7.30 0.00 34.07 2.92
505 507 8.362639 AGCCATTTTTATTAAATGATGCGAGAT 58.637 29.630 10.84 0.00 39.36 2.75
529 531 3.948851 CATCAACTGATGCACACATAGC 58.051 45.455 6.76 0.00 44.44 2.97
544 546 1.144936 CTCCGGCCTCTCCATCAAC 59.855 63.158 0.00 0.00 34.01 3.18
600 603 5.186996 AGTTTCAACAATGAATCAAGCGT 57.813 34.783 0.00 0.00 44.70 5.07
631 634 9.454859 ACACAATTAAATGAAAAACCCTTCAAA 57.545 25.926 0.00 0.00 38.75 2.69
632 635 9.103861 GACACAATTAAATGAAAAACCCTTCAA 57.896 29.630 0.00 0.00 38.75 2.69
633 636 7.713073 GGACACAATTAAATGAAAAACCCTTCA 59.287 33.333 0.00 0.00 39.56 3.02
634 637 7.931407 AGGACACAATTAAATGAAAAACCCTTC 59.069 33.333 0.00 0.00 0.00 3.46
635 638 7.801104 AGGACACAATTAAATGAAAAACCCTT 58.199 30.769 0.00 0.00 0.00 3.95
636 639 7.373617 AGGACACAATTAAATGAAAAACCCT 57.626 32.000 0.00 0.00 0.00 4.34
637 640 6.364976 CGAGGACACAATTAAATGAAAAACCC 59.635 38.462 0.00 0.00 0.00 4.11
638 641 6.128929 GCGAGGACACAATTAAATGAAAAACC 60.129 38.462 0.00 0.00 0.00 3.27
639 642 6.398517 CGCGAGGACACAATTAAATGAAAAAC 60.399 38.462 0.00 0.00 0.00 2.43
640 643 5.627367 CGCGAGGACACAATTAAATGAAAAA 59.373 36.000 0.00 0.00 0.00 1.94
641 644 5.150683 CGCGAGGACACAATTAAATGAAAA 58.849 37.500 0.00 0.00 0.00 2.29
642 645 4.717991 CGCGAGGACACAATTAAATGAAA 58.282 39.130 0.00 0.00 0.00 2.69
643 646 3.425625 GCGCGAGGACACAATTAAATGAA 60.426 43.478 12.10 0.00 0.00 2.57
644 647 2.095213 GCGCGAGGACACAATTAAATGA 59.905 45.455 12.10 0.00 0.00 2.57
645 648 2.440501 GCGCGAGGACACAATTAAATG 58.559 47.619 12.10 0.00 0.00 2.32
646 649 1.062002 CGCGCGAGGACACAATTAAAT 59.938 47.619 28.94 0.00 0.00 1.40
647 650 0.440758 CGCGCGAGGACACAATTAAA 59.559 50.000 28.94 0.00 0.00 1.52
648 651 1.355796 CCGCGCGAGGACACAATTAA 61.356 55.000 34.63 0.00 0.00 1.40
649 652 1.807981 CCGCGCGAGGACACAATTA 60.808 57.895 34.63 0.00 0.00 1.40
650 653 3.118454 CCGCGCGAGGACACAATT 61.118 61.111 34.63 0.00 0.00 2.32
654 657 4.814294 AATCCCGCGCGAGGACAC 62.814 66.667 32.58 0.00 35.85 3.67
655 658 4.812476 CAATCCCGCGCGAGGACA 62.812 66.667 32.58 16.63 35.85 4.02
656 659 4.508128 TCAATCCCGCGCGAGGAC 62.508 66.667 32.58 0.00 35.85 3.85
657 660 3.765578 TTCAATCCCGCGCGAGGA 61.766 61.111 32.20 32.20 37.93 3.71
658 661 3.564027 GTTCAATCCCGCGCGAGG 61.564 66.667 34.63 29.17 0.00 4.63
659 662 3.564027 GGTTCAATCCCGCGCGAG 61.564 66.667 34.63 20.97 0.00 5.03
660 663 4.380781 TGGTTCAATCCCGCGCGA 62.381 61.111 34.63 13.72 0.00 5.87
661 664 4.160635 GTGGTTCAATCCCGCGCG 62.161 66.667 25.67 25.67 0.00 6.86
662 665 2.746277 AGTGGTTCAATCCCGCGC 60.746 61.111 0.00 0.00 37.56 6.86
663 666 3.039202 GCAGTGGTTCAATCCCGCG 62.039 63.158 0.00 0.00 37.56 6.46
664 667 1.315257 ATGCAGTGGTTCAATCCCGC 61.315 55.000 0.00 0.00 0.00 6.13
665 668 2.036958 TATGCAGTGGTTCAATCCCG 57.963 50.000 0.00 0.00 0.00 5.14
666 669 4.402155 TGATTTATGCAGTGGTTCAATCCC 59.598 41.667 0.00 0.00 0.00 3.85
667 670 5.343249 GTGATTTATGCAGTGGTTCAATCC 58.657 41.667 0.00 0.00 0.00 3.01
668 671 5.030295 CGTGATTTATGCAGTGGTTCAATC 58.970 41.667 0.00 0.00 0.00 2.67
669 672 4.142403 CCGTGATTTATGCAGTGGTTCAAT 60.142 41.667 0.00 0.00 0.00 2.57
670 673 3.190327 CCGTGATTTATGCAGTGGTTCAA 59.810 43.478 0.00 0.00 0.00 2.69
671 674 2.746904 CCGTGATTTATGCAGTGGTTCA 59.253 45.455 0.00 0.00 0.00 3.18
672 675 2.097466 CCCGTGATTTATGCAGTGGTTC 59.903 50.000 0.00 0.00 0.00 3.62
673 676 2.091541 CCCGTGATTTATGCAGTGGTT 58.908 47.619 0.00 0.00 0.00 3.67
674 677 1.681780 CCCCGTGATTTATGCAGTGGT 60.682 52.381 0.00 0.00 0.00 4.16
675 678 1.024271 CCCCGTGATTTATGCAGTGG 58.976 55.000 0.00 0.00 0.00 4.00
676 679 0.381801 GCCCCGTGATTTATGCAGTG 59.618 55.000 0.00 0.00 0.00 3.66
677 680 0.034574 TGCCCCGTGATTTATGCAGT 60.035 50.000 0.00 0.00 0.00 4.40
678 681 1.102154 TTGCCCCGTGATTTATGCAG 58.898 50.000 0.00 0.00 0.00 4.41
679 682 1.550327 TTTGCCCCGTGATTTATGCA 58.450 45.000 0.00 0.00 0.00 3.96
680 683 2.663826 TTTTGCCCCGTGATTTATGC 57.336 45.000 0.00 0.00 0.00 3.14
681 684 4.744631 GCTTATTTTGCCCCGTGATTTATG 59.255 41.667 0.00 0.00 0.00 1.90
682 685 4.499019 CGCTTATTTTGCCCCGTGATTTAT 60.499 41.667 0.00 0.00 0.00 1.40
683 686 3.181495 CGCTTATTTTGCCCCGTGATTTA 60.181 43.478 0.00 0.00 0.00 1.40
684 687 2.416701 CGCTTATTTTGCCCCGTGATTT 60.417 45.455 0.00 0.00 0.00 2.17
685 688 1.134175 CGCTTATTTTGCCCCGTGATT 59.866 47.619 0.00 0.00 0.00 2.57
686 689 0.738389 CGCTTATTTTGCCCCGTGAT 59.262 50.000 0.00 0.00 0.00 3.06
687 690 1.309499 CCGCTTATTTTGCCCCGTGA 61.309 55.000 0.00 0.00 0.00 4.35
688 691 1.138671 CCGCTTATTTTGCCCCGTG 59.861 57.895 0.00 0.00 0.00 4.94
689 692 2.049767 CCCGCTTATTTTGCCCCGT 61.050 57.895 0.00 0.00 0.00 5.28
690 693 2.804856 CCCGCTTATTTTGCCCCG 59.195 61.111 0.00 0.00 0.00 5.73
691 694 2.499205 GCCCGCTTATTTTGCCCC 59.501 61.111 0.00 0.00 0.00 5.80
692 695 2.104132 CGCCCGCTTATTTTGCCC 59.896 61.111 0.00 0.00 0.00 5.36
693 696 1.226575 GTCGCCCGCTTATTTTGCC 60.227 57.895 0.00 0.00 0.00 4.52
694 697 1.582680 CGTCGCCCGCTTATTTTGC 60.583 57.895 0.00 0.00 0.00 3.68
695 698 1.061887 CCGTCGCCCGCTTATTTTG 59.938 57.895 0.00 0.00 34.38 2.44
696 699 2.110352 CCCGTCGCCCGCTTATTTT 61.110 57.895 0.00 0.00 34.38 1.82
697 700 2.512974 CCCGTCGCCCGCTTATTT 60.513 61.111 0.00 0.00 34.38 1.40
698 701 3.463585 TCCCGTCGCCCGCTTATT 61.464 61.111 0.00 0.00 34.38 1.40
699 702 4.217159 GTCCCGTCGCCCGCTTAT 62.217 66.667 0.00 0.00 34.38 1.73
712 715 3.291101 TACTCGCGTGCCAAGTCCC 62.291 63.158 5.77 0.00 0.00 4.46
713 716 2.092882 GTACTCGCGTGCCAAGTCC 61.093 63.158 5.77 0.00 0.00 3.85
714 717 2.092882 GGTACTCGCGTGCCAAGTC 61.093 63.158 7.86 0.00 44.40 3.01
715 718 2.048503 GGTACTCGCGTGCCAAGT 60.049 61.111 7.86 4.02 44.40 3.16
716 719 2.813908 GGGTACTCGCGTGCCAAG 60.814 66.667 14.73 0.00 46.53 3.61
717 720 4.382320 GGGGTACTCGCGTGCCAA 62.382 66.667 14.73 0.00 46.53 4.52
719 722 4.814294 CAGGGGTACTCGCGTGCC 62.814 72.222 5.77 3.82 44.29 5.01
724 727 4.530857 ATGCGCAGGGGTACTCGC 62.531 66.667 18.32 0.00 42.26 5.03
725 728 1.429148 GAAATGCGCAGGGGTACTCG 61.429 60.000 18.32 0.00 0.00 4.18
726 729 0.107654 AGAAATGCGCAGGGGTACTC 60.108 55.000 18.32 4.21 0.00 2.59
727 730 0.392998 CAGAAATGCGCAGGGGTACT 60.393 55.000 18.32 6.37 0.00 2.73
728 731 1.993369 GCAGAAATGCGCAGGGGTAC 61.993 60.000 18.32 3.99 0.00 3.34
729 732 1.748879 GCAGAAATGCGCAGGGGTA 60.749 57.895 18.32 0.00 0.00 3.69
730 733 3.064324 GCAGAAATGCGCAGGGGT 61.064 61.111 18.32 0.00 0.00 4.95
731 734 3.830192 GGCAGAAATGCGCAGGGG 61.830 66.667 18.32 4.53 35.24 4.79
732 735 4.183686 CGGCAGAAATGCGCAGGG 62.184 66.667 18.32 4.13 35.24 4.45
733 736 2.981560 AACGGCAGAAATGCGCAGG 61.982 57.895 18.32 3.75 35.24 4.85
734 737 1.798725 CAACGGCAGAAATGCGCAG 60.799 57.895 18.32 2.01 35.24 5.18
735 738 1.585267 ATCAACGGCAGAAATGCGCA 61.585 50.000 14.96 14.96 35.24 6.09
736 739 0.456653 AATCAACGGCAGAAATGCGC 60.457 50.000 0.00 0.00 35.24 6.09
737 740 1.135717 TGAATCAACGGCAGAAATGCG 60.136 47.619 0.00 0.00 35.24 4.73
738 741 2.095059 AGTGAATCAACGGCAGAAATGC 60.095 45.455 0.00 0.00 0.00 3.56
739 742 3.837213 AGTGAATCAACGGCAGAAATG 57.163 42.857 0.00 0.00 0.00 2.32
740 743 3.057315 CCAAGTGAATCAACGGCAGAAAT 60.057 43.478 0.00 0.00 0.00 2.17
741 744 2.293122 CCAAGTGAATCAACGGCAGAAA 59.707 45.455 0.00 0.00 0.00 2.52
742 745 1.879380 CCAAGTGAATCAACGGCAGAA 59.121 47.619 0.00 0.00 0.00 3.02
743 746 1.202758 ACCAAGTGAATCAACGGCAGA 60.203 47.619 0.00 0.00 0.00 4.26
744 747 1.197721 GACCAAGTGAATCAACGGCAG 59.802 52.381 0.00 0.00 0.00 4.85
745 748 1.202758 AGACCAAGTGAATCAACGGCA 60.203 47.619 0.00 0.00 0.00 5.69
746 749 1.464997 GAGACCAAGTGAATCAACGGC 59.535 52.381 0.00 0.00 0.00 5.68
747 750 2.996621 GAGAGACCAAGTGAATCAACGG 59.003 50.000 0.00 0.00 0.00 4.44
748 751 3.919216 AGAGAGACCAAGTGAATCAACG 58.081 45.455 0.00 0.00 0.00 4.10
749 752 4.887748 TGAGAGAGACCAAGTGAATCAAC 58.112 43.478 0.00 0.00 0.00 3.18
750 753 5.551305 TTGAGAGAGACCAAGTGAATCAA 57.449 39.130 0.00 0.00 0.00 2.57
751 754 5.483231 AGATTGAGAGAGACCAAGTGAATCA 59.517 40.000 0.00 0.00 0.00 2.57
752 755 5.976458 AGATTGAGAGAGACCAAGTGAATC 58.024 41.667 0.00 0.00 0.00 2.52
753 756 5.721000 AGAGATTGAGAGAGACCAAGTGAAT 59.279 40.000 0.00 0.00 0.00 2.57
754 757 5.083122 AGAGATTGAGAGAGACCAAGTGAA 58.917 41.667 0.00 0.00 0.00 3.18
755 758 4.671831 AGAGATTGAGAGAGACCAAGTGA 58.328 43.478 0.00 0.00 0.00 3.41
756 759 5.652014 AGTAGAGATTGAGAGAGACCAAGTG 59.348 44.000 0.00 0.00 0.00 3.16
757 760 5.826643 AGTAGAGATTGAGAGAGACCAAGT 58.173 41.667 0.00 0.00 0.00 3.16
788 791 2.563179 AGCTAGTTACCATGGGCTATCG 59.437 50.000 18.09 6.03 0.00 2.92
827 830 3.010696 TGCCCAATTATAACCTGTGGTGA 59.989 43.478 0.00 0.00 35.34 4.02
922 925 1.915614 GAAGGTCGACGTCGTGCCTA 61.916 60.000 36.57 20.60 41.71 3.93
1105 1108 1.122019 GGAGATGGAGGCGGGTACAT 61.122 60.000 0.00 0.00 0.00 2.29
1125 1132 4.266976 GCATGCAAAGAAATTGATCGGAAG 59.733 41.667 14.21 0.00 41.85 3.46
1200 1207 3.705638 CGATGCATGCTACGGCGG 61.706 66.667 20.33 0.00 42.25 6.13
1352 1359 4.500116 GAGTCGGTGAGGAGCGCC 62.500 72.222 2.29 0.00 42.92 6.53
1468 1475 9.219603 TCCTGTAAATTAAATCACAACTCAGAG 57.780 33.333 0.00 0.00 0.00 3.35
1475 1482 8.584157 AGCAATGTCCTGTAAATTAAATCACAA 58.416 29.630 0.00 0.00 0.00 3.33
1487 1494 2.167693 CCCTCGTAGCAATGTCCTGTAA 59.832 50.000 0.00 0.00 0.00 2.41
1600 1607 2.202851 ATCTTCTGCAGCGCCTCG 60.203 61.111 9.47 0.00 0.00 4.63
1686 1693 4.466828 CTGAACTTGCCTGAAATTACACG 58.533 43.478 0.00 0.00 0.00 4.49
1927 1946 7.974504 ACCTTATTCGTTTGATAGGGATGTAT 58.025 34.615 0.00 0.00 0.00 2.29
2141 2184 0.530650 CGCTGCGATCACAACCCTAT 60.531 55.000 18.66 0.00 0.00 2.57
2238 2281 1.452108 GAGGATGCCCCGAGGTTTG 60.452 63.158 0.00 0.00 40.87 2.93
2273 2316 3.228749 CACAACGAAATAGCACTGCAAG 58.771 45.455 3.30 0.00 42.29 4.01
2274 2317 2.604373 GCACAACGAAATAGCACTGCAA 60.604 45.455 3.30 0.00 0.00 4.08
2275 2318 1.069296 GCACAACGAAATAGCACTGCA 60.069 47.619 3.30 0.00 0.00 4.41
2276 2319 1.197721 AGCACAACGAAATAGCACTGC 59.802 47.619 0.00 0.00 0.00 4.40
2282 2325 6.920210 TCTGATCATCTAGCACAACGAAATAG 59.080 38.462 0.00 0.00 0.00 1.73
2283 2326 6.805713 TCTGATCATCTAGCACAACGAAATA 58.194 36.000 0.00 0.00 0.00 1.40
2289 2332 4.749099 GGTCATCTGATCATCTAGCACAAC 59.251 45.833 0.00 0.00 0.00 3.32
2295 2338 7.095732 CGAACAAATGGTCATCTGATCATCTAG 60.096 40.741 6.41 3.15 44.55 2.43
2296 2339 6.703165 CGAACAAATGGTCATCTGATCATCTA 59.297 38.462 6.41 0.00 44.55 1.98
2301 2344 5.352569 AGAACGAACAAATGGTCATCTGATC 59.647 40.000 0.00 0.00 29.71 2.92
2303 2346 4.641396 AGAACGAACAAATGGTCATCTGA 58.359 39.130 0.00 0.00 29.71 3.27
2304 2347 4.692625 AGAGAACGAACAAATGGTCATCTG 59.307 41.667 8.10 0.00 30.63 2.90
2305 2348 4.899502 AGAGAACGAACAAATGGTCATCT 58.100 39.130 4.07 4.07 32.40 2.90
2308 2351 4.703897 AGAAGAGAACGAACAAATGGTCA 58.296 39.130 0.00 0.00 0.00 4.02
2309 2352 5.674933 AAGAAGAGAACGAACAAATGGTC 57.325 39.130 0.00 0.00 0.00 4.02
2310 2353 6.265577 CAAAAGAAGAGAACGAACAAATGGT 58.734 36.000 0.00 0.00 0.00 3.55
2311 2354 5.173854 GCAAAAGAAGAGAACGAACAAATGG 59.826 40.000 0.00 0.00 0.00 3.16
2312 2355 5.973565 AGCAAAAGAAGAGAACGAACAAATG 59.026 36.000 0.00 0.00 0.00 2.32
2313 2356 5.973565 CAGCAAAAGAAGAGAACGAACAAAT 59.026 36.000 0.00 0.00 0.00 2.32
2318 2361 4.201910 CCAACAGCAAAAGAAGAGAACGAA 60.202 41.667 0.00 0.00 0.00 3.85
2320 2363 3.621794 CCAACAGCAAAAGAAGAGAACG 58.378 45.455 0.00 0.00 0.00 3.95
2321 2364 3.375642 GCCAACAGCAAAAGAAGAGAAC 58.624 45.455 0.00 0.00 42.97 3.01
2335 2378 2.671596 CCCGTAATTTGTTGCCAACAG 58.328 47.619 10.58 0.00 43.27 3.16
2345 2388 0.239879 AACTGCACGCCCGTAATTTG 59.760 50.000 0.00 0.00 0.00 2.32
2346 2389 0.519961 GAACTGCACGCCCGTAATTT 59.480 50.000 0.00 0.00 0.00 1.82
2347 2390 0.321298 AGAACTGCACGCCCGTAATT 60.321 50.000 0.00 0.00 0.00 1.40
2348 2391 0.533491 TAGAACTGCACGCCCGTAAT 59.467 50.000 0.00 0.00 0.00 1.89
2349 2392 0.108992 CTAGAACTGCACGCCCGTAA 60.109 55.000 0.00 0.00 0.00 3.18
2363 2406 6.612863 TCATTCTCATCAAGATGTCCCTAGAA 59.387 38.462 9.66 10.58 39.72 2.10
2366 2409 6.294955 CGATCATTCTCATCAAGATGTCCCTA 60.295 42.308 9.66 0.00 39.72 3.53
2393 2436 1.045911 AGTCTGCGGGGAGATTCCTC 61.046 60.000 0.00 0.00 36.57 3.71
2399 2442 2.283529 GGTTGAGTCTGCGGGGAGA 61.284 63.158 0.00 0.00 0.00 3.71
2405 2448 1.071471 AACAGGGGTTGAGTCTGCG 59.929 57.895 0.00 0.00 35.46 5.18
2420 2463 4.264253 CAATGCCATCTACCTTCTCAACA 58.736 43.478 0.00 0.00 0.00 3.33
2423 2466 2.507058 AGCAATGCCATCTACCTTCTCA 59.493 45.455 0.00 0.00 0.00 3.27
2437 2480 2.259618 CTGCATGAAACTCAGCAATGC 58.740 47.619 0.00 0.00 32.90 3.56
2444 2487 2.259266 TGTCTGCTGCATGAAACTCA 57.741 45.000 1.31 0.00 0.00 3.41
2445 2488 3.189910 TCATTGTCTGCTGCATGAAACTC 59.810 43.478 1.31 0.00 0.00 3.01
2446 2489 3.151554 TCATTGTCTGCTGCATGAAACT 58.848 40.909 1.31 0.00 0.00 2.66
2447 2490 3.564235 TCATTGTCTGCTGCATGAAAC 57.436 42.857 1.31 0.25 0.00 2.78
2448 2491 3.119280 CCATCATTGTCTGCTGCATGAAA 60.119 43.478 1.31 0.00 0.00 2.69
2449 2492 2.425668 CCATCATTGTCTGCTGCATGAA 59.574 45.455 1.31 0.00 0.00 2.57
2450 2493 2.021457 CCATCATTGTCTGCTGCATGA 58.979 47.619 1.31 3.82 0.00 3.07
2451 2494 2.021457 TCCATCATTGTCTGCTGCATG 58.979 47.619 1.31 0.00 0.00 4.06
2452 2495 2.430248 TCCATCATTGTCTGCTGCAT 57.570 45.000 1.31 0.00 0.00 3.96
2453 2496 2.089201 CTTCCATCATTGTCTGCTGCA 58.911 47.619 0.88 0.88 0.00 4.41
2456 2499 2.803030 AGCTTCCATCATTGTCTGCT 57.197 45.000 0.00 0.00 0.00 4.24
2457 2500 3.539604 AGTAGCTTCCATCATTGTCTGC 58.460 45.455 0.00 0.00 0.00 4.26
2459 2502 5.426689 TTGAGTAGCTTCCATCATTGTCT 57.573 39.130 0.00 0.00 0.00 3.41
2461 2504 5.106555 CGTTTTGAGTAGCTTCCATCATTGT 60.107 40.000 0.00 0.00 0.00 2.71
2462 2505 5.106555 ACGTTTTGAGTAGCTTCCATCATTG 60.107 40.000 0.00 0.00 0.00 2.82
2463 2506 5.003804 ACGTTTTGAGTAGCTTCCATCATT 58.996 37.500 0.00 0.00 0.00 2.57
2478 2543 9.923143 CCTATAGGTGAATCATATACGTTTTGA 57.077 33.333 10.96 0.00 0.00 2.69
2500 2565 4.289934 TCCGGATCTAGAGTCATGACCTAT 59.710 45.833 22.21 10.86 0.00 2.57
2501 2566 3.651423 TCCGGATCTAGAGTCATGACCTA 59.349 47.826 22.21 19.46 0.00 3.08
2515 2580 2.279517 GTCGCGCATTCCGGATCT 60.280 61.111 4.15 0.00 37.44 2.75
2623 2691 7.044798 GCCATTTCTCTTCTACTGAACATAGT 58.955 38.462 0.00 0.00 34.71 2.12
2629 2697 5.869579 AGTTGCCATTTCTCTTCTACTGAA 58.130 37.500 0.00 0.00 0.00 3.02
2630 2698 5.489792 AGTTGCCATTTCTCTTCTACTGA 57.510 39.130 0.00 0.00 0.00 3.41
2631 2699 5.471456 ACAAGTTGCCATTTCTCTTCTACTG 59.529 40.000 1.81 0.00 0.00 2.74
2667 2735 9.871299 GTGAAAACAAAACACAAACTTTATGTT 57.129 25.926 0.00 0.00 41.29 2.71
2673 2741 5.051153 ACGGTGAAAACAAAACACAAACTT 58.949 33.333 0.00 0.00 36.42 2.66
2675 2743 4.682401 AGACGGTGAAAACAAAACACAAAC 59.318 37.500 0.00 0.00 36.42 2.93
2683 2751 4.238514 CCAAAACAGACGGTGAAAACAAA 58.761 39.130 0.00 0.00 0.00 2.83
2712 2780 1.546923 ACGATACACACGATGGAACCA 59.453 47.619 0.00 0.00 34.70 3.67
2803 2872 3.506810 GAGACATCTCGACCAACTCAAG 58.493 50.000 0.00 0.00 32.78 3.02
2836 2908 5.118990 GCTGCTCTCAACCTATACATTTGA 58.881 41.667 0.00 0.00 0.00 2.69
2838 2910 4.122776 CGCTGCTCTCAACCTATACATTT 58.877 43.478 0.00 0.00 0.00 2.32
2880 2957 4.039004 CAGAACCTCTGGATCATCGAGATT 59.961 45.833 0.00 0.00 40.71 2.40
2929 3006 1.630148 GTTTCGGTCTCGTCATCCAG 58.370 55.000 0.00 0.00 37.69 3.86
2983 3060 4.562963 GGTCGCCTCCTTCTCTAAAAGAAA 60.563 45.833 0.00 0.00 43.39 2.52
2986 3063 2.233922 TGGTCGCCTCCTTCTCTAAAAG 59.766 50.000 0.00 0.00 0.00 2.27
2987 3064 2.233922 CTGGTCGCCTCCTTCTCTAAAA 59.766 50.000 0.00 0.00 0.00 1.52
2988 3065 1.825474 CTGGTCGCCTCCTTCTCTAAA 59.175 52.381 0.00 0.00 0.00 1.85
2989 3066 1.475403 CTGGTCGCCTCCTTCTCTAA 58.525 55.000 0.00 0.00 0.00 2.10
2990 3067 0.395862 CCTGGTCGCCTCCTTCTCTA 60.396 60.000 0.00 0.00 0.00 2.43
2991 3068 1.684049 CCTGGTCGCCTCCTTCTCT 60.684 63.158 0.00 0.00 0.00 3.10
2992 3069 1.950973 GACCTGGTCGCCTCCTTCTC 61.951 65.000 11.71 0.00 0.00 2.87
2993 3070 1.985116 GACCTGGTCGCCTCCTTCT 60.985 63.158 11.71 0.00 0.00 2.85
2994 3071 2.579738 GACCTGGTCGCCTCCTTC 59.420 66.667 11.71 0.00 0.00 3.46
2995 3072 3.003763 GGACCTGGTCGCCTCCTT 61.004 66.667 19.98 0.00 32.65 3.36
2998 3075 3.775654 CTGGGACCTGGTCGCCTC 61.776 72.222 32.87 17.59 43.42 4.70
2999 3076 4.640690 ACTGGGACCTGGTCGCCT 62.641 66.667 32.87 19.58 43.42 5.52
3000 3077 3.192103 AAACTGGGACCTGGTCGCC 62.192 63.158 32.87 26.63 43.42 5.54
3001 3078 1.671379 GAAACTGGGACCTGGTCGC 60.671 63.158 30.62 30.62 44.15 5.19
3002 3079 0.396811 AAGAAACTGGGACCTGGTCG 59.603 55.000 19.98 9.47 32.65 4.79
3003 3080 2.658807 AAAGAAACTGGGACCTGGTC 57.341 50.000 18.65 18.65 0.00 4.02
3004 3081 3.720002 TCTAAAAGAAACTGGGACCTGGT 59.280 43.478 0.00 0.00 0.00 4.00
3005 3082 4.041691 TCTCTAAAAGAAACTGGGACCTGG 59.958 45.833 0.00 0.00 0.00 4.45
3006 3083 5.228945 TCTCTAAAAGAAACTGGGACCTG 57.771 43.478 0.00 0.00 0.00 4.00
3007 3084 5.221945 CCTTCTCTAAAAGAAACTGGGACCT 60.222 44.000 0.00 0.00 43.39 3.85
3008 3085 5.004448 CCTTCTCTAAAAGAAACTGGGACC 58.996 45.833 0.00 0.00 43.39 4.46
3009 3086 5.866207 TCCTTCTCTAAAAGAAACTGGGAC 58.134 41.667 0.00 0.00 43.39 4.46
3010 3087 6.509523 TTCCTTCTCTAAAAGAAACTGGGA 57.490 37.500 0.00 0.00 43.39 4.37
3011 3088 5.182190 GCTTCCTTCTCTAAAAGAAACTGGG 59.818 44.000 0.00 0.00 43.39 4.45
3012 3089 5.106908 CGCTTCCTTCTCTAAAAGAAACTGG 60.107 44.000 0.00 0.00 43.39 4.00
3013 3090 5.696724 TCGCTTCCTTCTCTAAAAGAAACTG 59.303 40.000 0.00 0.00 43.39 3.16
3014 3091 5.697178 GTCGCTTCCTTCTCTAAAAGAAACT 59.303 40.000 0.00 0.00 43.39 2.66
3015 3092 5.107026 GGTCGCTTCCTTCTCTAAAAGAAAC 60.107 44.000 0.00 0.00 43.39 2.78
3016 3093 4.995487 GGTCGCTTCCTTCTCTAAAAGAAA 59.005 41.667 0.00 0.00 43.39 2.52
3017 3094 4.039973 TGGTCGCTTCCTTCTCTAAAAGAA 59.960 41.667 0.00 0.00 41.81 2.52
3018 3095 3.576982 TGGTCGCTTCCTTCTCTAAAAGA 59.423 43.478 0.00 0.00 0.00 2.52
3019 3096 3.926616 TGGTCGCTTCCTTCTCTAAAAG 58.073 45.455 0.00 0.00 0.00 2.27
3024 3101 0.543174 ACCTGGTCGCTTCCTTCTCT 60.543 55.000 0.00 0.00 0.00 3.10
3027 3104 1.079057 GGACCTGGTCGCTTCCTTC 60.079 63.158 19.98 0.38 32.65 3.46
3033 3110 2.039624 ATCTGGGACCTGGTCGCT 59.960 61.111 34.54 18.78 44.20 4.93
3037 3114 1.207791 GACATCATCTGGGACCTGGT 58.792 55.000 0.00 0.00 0.00 4.00
3060 3137 4.148825 GCCGCCTCGTGGATGACT 62.149 66.667 7.92 0.00 34.74 3.41
3178 3255 4.054825 GGGGGCGAACACGTACGA 62.055 66.667 24.41 0.00 0.00 3.43
3182 3259 0.956902 GTTAATGGGGGCGAACACGT 60.957 55.000 0.00 0.00 0.00 4.49
3183 3260 1.650314 GGTTAATGGGGGCGAACACG 61.650 60.000 0.00 0.00 0.00 4.49
3185 3262 1.000646 GGGTTAATGGGGGCGAACA 60.001 57.895 0.00 0.00 0.00 3.18
3203 3282 1.881709 ATGCAGACGATGAGCAGCG 60.882 57.895 6.59 6.59 46.76 5.18
3207 3286 0.041224 CATGCATGCAGACGATGAGC 60.041 55.000 26.69 0.00 0.00 4.26
3338 3417 1.728425 CATCATCACATGTATCCCGCG 59.272 52.381 0.00 0.00 0.00 6.46
3339 3418 3.044235 TCATCATCACATGTATCCCGC 57.956 47.619 0.00 0.00 0.00 6.13
3404 3483 0.435008 CGTCTTCGTACTGCAAGCAC 59.565 55.000 0.00 0.00 37.60 4.40
3425 3504 2.203938 ACCACCATGTCCCGGTCT 60.204 61.111 0.00 0.00 33.25 3.85
3525 3604 5.357878 TGAAGAGAACAAGTTTTGTGATGCT 59.642 36.000 0.00 0.00 44.59 3.79
3533 3612 2.618709 CCGGCTGAAGAGAACAAGTTTT 59.381 45.455 0.00 0.00 0.00 2.43
3544 3623 1.028905 CAAACCAAACCGGCTGAAGA 58.971 50.000 0.00 0.00 39.03 2.87
3545 3624 1.028905 TCAAACCAAACCGGCTGAAG 58.971 50.000 0.00 0.00 39.03 3.02
3638 3720 4.168291 GAGGCCAGGCTTCTCCGG 62.168 72.222 16.42 0.00 40.77 5.14
3653 3735 0.167470 TCGTCGTTCCGTTGCTAGAG 59.833 55.000 0.00 0.00 0.00 2.43
3658 3740 2.084681 ATCGTCGTCGTTCCGTTGC 61.085 57.895 1.33 0.00 38.33 4.17
3804 3886 5.092968 TCTTTTCACATGGGAATGGGATTT 58.907 37.500 12.06 0.00 33.42 2.17
3838 3921 3.374058 ACCGTGCAGATTAAAGATTTCCG 59.626 43.478 0.00 0.00 0.00 4.30
3880 3963 5.007528 GTGTTACTCTCGGTGTATCTACCTC 59.992 48.000 0.00 0.00 38.62 3.85
3897 3981 0.394938 TGTGTCATGCCCGTGTTACT 59.605 50.000 0.00 0.00 0.00 2.24
3960 4044 5.526846 GGCTTCTTCATTTCTGGAGATGTAG 59.473 44.000 1.96 2.41 36.86 2.74
3993 4077 0.109086 ATGTTCTCGTCGTCTGCCAG 60.109 55.000 0.00 0.00 0.00 4.85
4057 4143 3.536956 TTCAACTCCTCTGTTTGACGT 57.463 42.857 0.00 0.00 0.00 4.34
4075 4161 0.750249 CAACCCACCCACCAAGTTTC 59.250 55.000 0.00 0.00 0.00 2.78
4076 4162 0.689412 CCAACCCACCCACCAAGTTT 60.689 55.000 0.00 0.00 0.00 2.66
4077 4163 1.075600 CCAACCCACCCACCAAGTT 60.076 57.895 0.00 0.00 0.00 2.66
4078 4164 1.881057 AACCAACCCACCCACCAAGT 61.881 55.000 0.00 0.00 0.00 3.16
4079 4165 0.689412 AAACCAACCCACCCACCAAG 60.689 55.000 0.00 0.00 0.00 3.61
4080 4166 0.978146 CAAACCAACCCACCCACCAA 60.978 55.000 0.00 0.00 0.00 3.67
4081 4167 1.381872 CAAACCAACCCACCCACCA 60.382 57.895 0.00 0.00 0.00 4.17
4082 4168 0.978667 AACAAACCAACCCACCCACC 60.979 55.000 0.00 0.00 0.00 4.61
4083 4169 0.906066 AAACAAACCAACCCACCCAC 59.094 50.000 0.00 0.00 0.00 4.61
4084 4170 1.196012 GAAACAAACCAACCCACCCA 58.804 50.000 0.00 0.00 0.00 4.51
4085 4171 1.196012 TGAAACAAACCAACCCACCC 58.804 50.000 0.00 0.00 0.00 4.61
4086 4172 3.336138 TTTGAAACAAACCAACCCACC 57.664 42.857 0.00 0.00 0.00 4.61
4111 4197 3.005367 CCCAACGCACCAAGTATCTTTTT 59.995 43.478 0.00 0.00 0.00 1.94
4112 4198 2.556622 CCCAACGCACCAAGTATCTTTT 59.443 45.455 0.00 0.00 0.00 2.27
4113 4199 2.159382 CCCAACGCACCAAGTATCTTT 58.841 47.619 0.00 0.00 0.00 2.52
4114 4200 1.613255 CCCCAACGCACCAAGTATCTT 60.613 52.381 0.00 0.00 0.00 2.40
4115 4201 0.035439 CCCCAACGCACCAAGTATCT 60.035 55.000 0.00 0.00 0.00 1.98
4147 4233 4.263572 TTGTGTGGACCAGGGCGG 62.264 66.667 0.00 0.00 42.50 6.13
4152 4238 1.202639 TGTAGCACTTGTGTGGACCAG 60.203 52.381 0.00 0.00 43.97 4.00
4153 4239 0.833949 TGTAGCACTTGTGTGGACCA 59.166 50.000 0.00 0.00 43.97 4.02
4176 4262 2.615912 GCCTGGATTTGTATGTCTGCTC 59.384 50.000 0.00 0.00 0.00 4.26
4177 4263 2.648059 GCCTGGATTTGTATGTCTGCT 58.352 47.619 0.00 0.00 0.00 4.24
4178 4264 1.678101 GGCCTGGATTTGTATGTCTGC 59.322 52.381 0.00 0.00 0.00 4.26
4179 4265 2.092212 AGGGCCTGGATTTGTATGTCTG 60.092 50.000 4.50 0.00 0.00 3.51
4180 4266 2.173569 GAGGGCCTGGATTTGTATGTCT 59.826 50.000 12.95 0.00 0.00 3.41
4181 4267 2.092429 TGAGGGCCTGGATTTGTATGTC 60.092 50.000 12.95 0.00 0.00 3.06
4182 4268 1.922447 TGAGGGCCTGGATTTGTATGT 59.078 47.619 12.95 0.00 0.00 2.29
4183 4269 2.734755 TGAGGGCCTGGATTTGTATG 57.265 50.000 12.95 0.00 0.00 2.39
4184 4270 3.365472 GTTTGAGGGCCTGGATTTGTAT 58.635 45.455 12.95 0.00 0.00 2.29
4185 4271 2.802719 GTTTGAGGGCCTGGATTTGTA 58.197 47.619 12.95 0.00 0.00 2.41
4186 4272 1.632589 GTTTGAGGGCCTGGATTTGT 58.367 50.000 12.95 0.00 0.00 2.83
4187 4273 0.527565 CGTTTGAGGGCCTGGATTTG 59.472 55.000 12.95 0.00 0.00 2.32
4188 4274 1.250840 GCGTTTGAGGGCCTGGATTT 61.251 55.000 12.95 0.00 0.00 2.17
4189 4275 1.678970 GCGTTTGAGGGCCTGGATT 60.679 57.895 12.95 0.00 0.00 3.01
4190 4276 2.044946 GCGTTTGAGGGCCTGGAT 60.045 61.111 12.95 0.00 0.00 3.41
4191 4277 4.344865 GGCGTTTGAGGGCCTGGA 62.345 66.667 12.95 0.00 45.93 3.86
4196 4282 1.095807 GTCTATGGGCGTTTGAGGGC 61.096 60.000 0.00 0.00 0.00 5.19
4197 4283 0.810031 CGTCTATGGGCGTTTGAGGG 60.810 60.000 0.00 0.00 0.00 4.30
4198 4284 0.108329 ACGTCTATGGGCGTTTGAGG 60.108 55.000 1.65 0.00 38.21 3.86
4199 4285 0.999406 CACGTCTATGGGCGTTTGAG 59.001 55.000 5.79 0.00 39.48 3.02
4200 4286 1.017177 GCACGTCTATGGGCGTTTGA 61.017 55.000 5.79 0.00 39.48 2.69
4201 4287 1.423845 GCACGTCTATGGGCGTTTG 59.576 57.895 5.79 0.00 39.48 2.93
4202 4288 1.743995 GGCACGTCTATGGGCGTTT 60.744 57.895 5.79 0.00 39.48 3.60
4203 4289 2.125269 GGCACGTCTATGGGCGTT 60.125 61.111 5.79 0.00 39.48 4.84
4204 4290 3.075005 AGGCACGTCTATGGGCGT 61.075 61.111 1.65 1.65 42.45 5.68
4205 4291 2.586079 CAGGCACGTCTATGGGCG 60.586 66.667 0.00 0.00 0.00 6.13
4206 4292 1.521681 GTCAGGCACGTCTATGGGC 60.522 63.158 0.00 0.00 0.00 5.36
4207 4293 0.465705 ATGTCAGGCACGTCTATGGG 59.534 55.000 0.00 0.00 0.00 4.00
4208 4294 1.935873 CAATGTCAGGCACGTCTATGG 59.064 52.381 0.00 0.00 0.00 2.74
4209 4295 2.604914 GTCAATGTCAGGCACGTCTATG 59.395 50.000 0.00 0.00 0.00 2.23
4210 4296 2.418746 GGTCAATGTCAGGCACGTCTAT 60.419 50.000 0.00 0.00 0.00 1.98
4211 4297 1.067142 GGTCAATGTCAGGCACGTCTA 60.067 52.381 0.00 0.00 0.00 2.59
4212 4298 0.320771 GGTCAATGTCAGGCACGTCT 60.321 55.000 0.00 0.00 0.00 4.18
4213 4299 1.626654 CGGTCAATGTCAGGCACGTC 61.627 60.000 0.00 0.00 0.00 4.34
4214 4300 1.667830 CGGTCAATGTCAGGCACGT 60.668 57.895 0.00 0.00 0.00 4.49
4215 4301 2.390599 CCGGTCAATGTCAGGCACG 61.391 63.158 0.00 0.00 0.00 5.34
4216 4302 2.040544 CCCGGTCAATGTCAGGCAC 61.041 63.158 0.00 0.00 0.00 5.01
4217 4303 2.350895 CCCGGTCAATGTCAGGCA 59.649 61.111 0.00 0.00 0.00 4.75
4218 4304 3.134127 GCCCGGTCAATGTCAGGC 61.134 66.667 0.00 0.00 0.00 4.85
4219 4305 0.609131 AAAGCCCGGTCAATGTCAGG 60.609 55.000 0.00 0.00 0.00 3.86
4220 4306 0.523072 CAAAGCCCGGTCAATGTCAG 59.477 55.000 0.00 0.00 0.00 3.51
4221 4307 0.109532 TCAAAGCCCGGTCAATGTCA 59.890 50.000 0.00 0.00 0.00 3.58
4222 4308 0.521735 GTCAAAGCCCGGTCAATGTC 59.478 55.000 0.00 0.00 0.00 3.06
4223 4309 0.179004 TGTCAAAGCCCGGTCAATGT 60.179 50.000 0.00 0.00 0.00 2.71
4224 4310 0.240945 GTGTCAAAGCCCGGTCAATG 59.759 55.000 0.00 0.00 0.00 2.82
4225 4311 0.893727 GGTGTCAAAGCCCGGTCAAT 60.894 55.000 0.00 0.00 0.00 2.57
4226 4312 1.527380 GGTGTCAAAGCCCGGTCAA 60.527 57.895 0.00 0.00 0.00 3.18
4227 4313 2.112297 GGTGTCAAAGCCCGGTCA 59.888 61.111 0.00 0.00 0.00 4.02
4228 4314 2.671963 GGGTGTCAAAGCCCGGTC 60.672 66.667 0.00 0.00 40.90 4.79
4239 4325 2.108278 ATATAAGGGGCGCGGGTGTC 62.108 60.000 8.83 0.00 0.00 3.67
4249 4335 4.699925 TTGAGGGTTCGAATATAAGGGG 57.300 45.455 0.00 0.00 0.00 4.79
4254 4340 6.770303 TGCATGATTTTGAGGGTTCGAATATA 59.230 34.615 0.00 0.00 0.00 0.86
4304 4390 3.686128 TGCGTGTGTTGATTGTGTTTAC 58.314 40.909 0.00 0.00 0.00 2.01
4305 4391 3.375610 ACTGCGTGTGTTGATTGTGTTTA 59.624 39.130 0.00 0.00 0.00 2.01
4306 4392 2.163412 ACTGCGTGTGTTGATTGTGTTT 59.837 40.909 0.00 0.00 0.00 2.83
4307 4393 1.742831 ACTGCGTGTGTTGATTGTGTT 59.257 42.857 0.00 0.00 0.00 3.32
4309 4395 2.473530 AACTGCGTGTGTTGATTGTG 57.526 45.000 0.00 0.00 0.00 3.33
4310 4396 4.610456 CGATAAACTGCGTGTGTTGATTGT 60.610 41.667 0.00 0.00 0.00 2.71
4313 4399 2.415168 CCGATAAACTGCGTGTGTTGAT 59.585 45.455 0.00 0.00 0.00 2.57
4314 4400 1.795872 CCGATAAACTGCGTGTGTTGA 59.204 47.619 0.00 0.00 0.00 3.18
4315 4401 1.795872 TCCGATAAACTGCGTGTGTTG 59.204 47.619 0.00 0.00 0.00 3.33
4316 4402 2.157834 TCCGATAAACTGCGTGTGTT 57.842 45.000 0.00 0.00 0.00 3.32
4371 4457 2.459060 TTTGCCGTTGAACTCCGATA 57.541 45.000 0.00 0.00 0.00 2.92
4427 4522 2.900337 CGCCCTTCCCCGTTATGC 60.900 66.667 0.00 0.00 0.00 3.14
4461 4556 2.768344 GGGAAGGGGCCGATGAGA 60.768 66.667 0.00 0.00 0.00 3.27
4465 4560 3.097162 GAAGGGGAAGGGGCCGAT 61.097 66.667 0.00 0.00 0.00 4.18
4544 4640 2.997315 CCACCTCCAGCTCCGACA 60.997 66.667 0.00 0.00 0.00 4.35
4578 4674 0.898326 TGAGGTGCAGCTCCGACTTA 60.898 55.000 35.89 18.46 0.00 2.24
4579 4675 1.548357 ATGAGGTGCAGCTCCGACTT 61.548 55.000 35.89 17.09 0.00 3.01
4600 4696 0.037326 CTGCTTTGTAGGCTGTCGGA 60.037 55.000 0.00 0.00 0.00 4.55
4729 4825 2.578163 GATGCGTGGTGCCTCTGCTA 62.578 60.000 0.00 0.00 45.60 3.49
4730 4826 3.965539 GATGCGTGGTGCCTCTGCT 62.966 63.158 0.00 0.00 45.60 4.24
4733 4829 4.457496 CGGATGCGTGGTGCCTCT 62.457 66.667 0.00 0.00 45.60 3.69
4759 4855 1.378646 TCCGCCACTCTCTGACGAT 60.379 57.895 0.00 0.00 0.00 3.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.