Multiple sequence alignment - TraesCS5A01G208100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G208100 chr5A 100.000 2984 0 0 1 2984 420240643 420237660 0.000000e+00 5511.0
1 TraesCS5A01G208100 chr5B 90.130 1611 91 41 488 2061 375457718 375456139 0.000000e+00 2032.0
2 TraesCS5A01G208100 chr5B 92.213 244 14 4 2657 2897 375454360 375454119 1.020000e-89 340.0
3 TraesCS5A01G208100 chr5B 87.624 202 17 5 2065 2259 375456163 375455963 8.320000e-56 228.0
4 TraesCS5A01G208100 chr5B 85.484 186 17 7 2311 2491 375454954 375454774 5.080000e-43 185.0
5 TraesCS5A01G208100 chr5D 94.418 1057 55 2 997 2053 323853039 323851987 0.000000e+00 1622.0
6 TraesCS5A01G208100 chr5D 90.431 418 30 5 2480 2897 323850076 323849669 2.620000e-150 542.0
7 TraesCS5A01G208100 chr5D 84.944 538 14 22 457 960 323853547 323853043 1.610000e-132 483.0
8 TraesCS5A01G208100 chr5D 88.452 407 32 5 2065 2461 323852001 323851600 7.480000e-131 477.0
9 TraesCS5A01G208100 chr1D 89.157 415 36 5 1 414 110895809 110896215 2.650000e-140 508.0
10 TraesCS5A01G208100 chr6B 86.506 415 39 8 1 414 293136713 293137111 9.820000e-120 440.0
11 TraesCS5A01G208100 chr2B 84.211 418 57 8 1 414 462956948 462957360 5.990000e-107 398.0
12 TraesCS5A01G208100 chr2B 82.857 420 62 6 1 414 34256671 34256256 4.700000e-98 368.0
13 TraesCS5A01G208100 chr2B 92.135 89 7 0 2894 2982 717213942 717214030 3.120000e-25 126.0
14 TraesCS5A01G208100 chr3A 78.222 225 39 9 2531 2749 475740159 475739939 5.190000e-28 135.0
15 TraesCS5A01G208100 chr3A 91.860 86 7 0 2897 2982 566936201 566936116 1.450000e-23 121.0
16 TraesCS5A01G208100 chr7A 94.186 86 5 0 2897 2982 503449071 503448986 6.710000e-27 132.0
17 TraesCS5A01G208100 chr7A 93.182 88 6 0 2895 2982 175240530 175240617 2.410000e-26 130.0
18 TraesCS5A01G208100 chr7A 93.023 86 6 0 2897 2982 732467285 732467200 3.120000e-25 126.0
19 TraesCS5A01G208100 chr7A 91.860 86 7 0 2897 2982 516145586 516145671 1.450000e-23 121.0
20 TraesCS5A01G208100 chr1B 94.118 85 5 0 2898 2982 161567247 161567163 2.410000e-26 130.0
21 TraesCS5A01G208100 chr2D 89.796 98 9 1 2880 2977 473721118 473721022 1.120000e-24 124.0
22 TraesCS5A01G208100 chr6A 89.888 89 9 0 2894 2982 554824469 554824557 6.760000e-22 115.0
23 TraesCS5A01G208100 chr2A 100.000 33 0 0 2394 2426 777533885 777533917 8.930000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G208100 chr5A 420237660 420240643 2983 True 5511.00 5511 100.00000 1 2984 1 chr5A.!!$R1 2983
1 TraesCS5A01G208100 chr5B 375454119 375457718 3599 True 696.25 2032 88.86275 488 2897 4 chr5B.!!$R1 2409
2 TraesCS5A01G208100 chr5D 323849669 323853547 3878 True 781.00 1622 89.56125 457 2897 4 chr5D.!!$R1 2440

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
166 167 0.032678 ACAACAGAGTCTCAGCGGTG 59.967 55.0 8.67 8.67 0.00 4.94 F
405 406 0.111253 CCAGGTTTGCTGGTCTTCCT 59.889 55.0 0.00 0.00 37.22 3.36 F
618 619 0.253894 CACTCAGTGATCCATGCCCA 59.746 55.0 0.00 0.00 35.23 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1341 1411 0.965866 TGTAGCTGGAGGTGGAGTCG 60.966 60.000 0.00 0.0 0.00 4.18 R
1383 1453 1.006102 GGACTCAGTGTCGGTGGTG 60.006 63.158 0.00 0.0 46.24 4.17 R
2545 5281 0.659427 TTCACGCTCGAGTATACGGG 59.341 55.000 15.13 10.2 36.78 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.601664 TTGCTTGGCAAAACCCAGT 58.398 47.368 0.00 0.00 45.96 4.00
22 23 1.781786 TTGCTTGGCAAAACCCAGTA 58.218 45.000 0.00 0.00 45.96 2.74
23 24 1.781786 TGCTTGGCAAAACCCAGTAA 58.218 45.000 0.00 0.00 34.76 2.24
24 25 1.686052 TGCTTGGCAAAACCCAGTAAG 59.314 47.619 0.00 0.00 34.76 2.34
25 26 1.605457 GCTTGGCAAAACCCAGTAAGC 60.605 52.381 0.00 0.00 37.83 3.09
26 27 1.963515 CTTGGCAAAACCCAGTAAGCT 59.036 47.619 0.00 0.00 37.83 3.74
27 28 1.616159 TGGCAAAACCCAGTAAGCTC 58.384 50.000 0.00 0.00 37.83 4.09
28 29 1.133637 TGGCAAAACCCAGTAAGCTCA 60.134 47.619 0.00 0.00 37.83 4.26
29 30 1.960689 GGCAAAACCCAGTAAGCTCAA 59.039 47.619 0.00 0.00 0.00 3.02
30 31 2.364002 GGCAAAACCCAGTAAGCTCAAA 59.636 45.455 0.00 0.00 0.00 2.69
31 32 3.181470 GGCAAAACCCAGTAAGCTCAAAA 60.181 43.478 0.00 0.00 0.00 2.44
32 33 4.051237 GCAAAACCCAGTAAGCTCAAAAG 58.949 43.478 0.00 0.00 0.00 2.27
33 34 4.202111 GCAAAACCCAGTAAGCTCAAAAGA 60.202 41.667 0.00 0.00 0.00 2.52
34 35 5.523369 CAAAACCCAGTAAGCTCAAAAGAG 58.477 41.667 0.00 0.00 0.00 2.85
35 36 4.706842 AACCCAGTAAGCTCAAAAGAGA 57.293 40.909 0.00 0.00 0.00 3.10
36 37 4.917906 ACCCAGTAAGCTCAAAAGAGAT 57.082 40.909 0.00 0.00 0.00 2.75
37 38 4.583871 ACCCAGTAAGCTCAAAAGAGATG 58.416 43.478 0.00 0.00 0.00 2.90
38 39 4.042187 ACCCAGTAAGCTCAAAAGAGATGT 59.958 41.667 0.00 0.00 0.00 3.06
39 40 4.394300 CCCAGTAAGCTCAAAAGAGATGTG 59.606 45.833 0.00 0.00 0.00 3.21
40 41 4.394300 CCAGTAAGCTCAAAAGAGATGTGG 59.606 45.833 0.00 0.00 0.00 4.17
41 42 5.240891 CAGTAAGCTCAAAAGAGATGTGGA 58.759 41.667 0.00 0.00 0.00 4.02
42 43 5.879223 CAGTAAGCTCAAAAGAGATGTGGAT 59.121 40.000 0.00 0.00 0.00 3.41
43 44 7.044181 CAGTAAGCTCAAAAGAGATGTGGATA 58.956 38.462 0.00 0.00 0.00 2.59
44 45 7.714377 CAGTAAGCTCAAAAGAGATGTGGATAT 59.286 37.037 0.00 0.00 0.00 1.63
45 46 7.930865 AGTAAGCTCAAAAGAGATGTGGATATC 59.069 37.037 0.00 0.00 0.00 1.63
46 47 6.244552 AGCTCAAAAGAGATGTGGATATCA 57.755 37.500 4.83 0.00 0.00 2.15
47 48 6.656902 AGCTCAAAAGAGATGTGGATATCAA 58.343 36.000 4.83 0.00 0.00 2.57
48 49 7.288560 AGCTCAAAAGAGATGTGGATATCAAT 58.711 34.615 4.83 0.00 0.00 2.57
49 50 7.444792 AGCTCAAAAGAGATGTGGATATCAATC 59.555 37.037 4.83 4.82 0.00 2.67
50 51 7.570875 GCTCAAAAGAGATGTGGATATCAATCG 60.571 40.741 4.83 0.00 32.44 3.34
51 52 7.275183 TCAAAAGAGATGTGGATATCAATCGT 58.725 34.615 4.83 0.00 32.44 3.73
52 53 7.439356 TCAAAAGAGATGTGGATATCAATCGTC 59.561 37.037 4.83 5.32 32.44 4.20
53 54 6.662865 AAGAGATGTGGATATCAATCGTCT 57.337 37.500 4.83 9.64 32.44 4.18
54 55 6.266168 AGAGATGTGGATATCAATCGTCTC 57.734 41.667 21.97 21.97 32.73 3.36
55 56 5.184864 AGAGATGTGGATATCAATCGTCTCC 59.815 44.000 23.81 14.59 32.84 3.71
56 57 4.835056 AGATGTGGATATCAATCGTCTCCA 59.165 41.667 4.83 0.00 33.70 3.86
57 58 5.305386 AGATGTGGATATCAATCGTCTCCAA 59.695 40.000 4.83 0.00 37.72 3.53
58 59 4.948847 TGTGGATATCAATCGTCTCCAAG 58.051 43.478 4.83 0.00 37.72 3.61
59 60 4.649218 TGTGGATATCAATCGTCTCCAAGA 59.351 41.667 4.83 0.00 37.72 3.02
60 61 4.985409 GTGGATATCAATCGTCTCCAAGAC 59.015 45.833 4.83 0.00 41.71 3.01
67 68 2.342648 GTCTCCAAGACGGCGGTT 59.657 61.111 13.24 0.44 35.28 4.44
68 69 2.027625 GTCTCCAAGACGGCGGTTG 61.028 63.158 13.24 14.35 35.28 3.77
69 70 2.204461 TCTCCAAGACGGCGGTTGA 61.204 57.895 21.42 9.75 33.14 3.18
70 71 1.301401 CTCCAAGACGGCGGTTGAA 60.301 57.895 21.42 4.63 33.14 2.69
71 72 1.566018 CTCCAAGACGGCGGTTGAAC 61.566 60.000 21.42 0.00 33.14 3.18
72 73 1.890041 CCAAGACGGCGGTTGAACA 60.890 57.895 21.42 0.00 0.00 3.18
73 74 1.440938 CCAAGACGGCGGTTGAACAA 61.441 55.000 21.42 0.00 0.00 2.83
74 75 0.378962 CAAGACGGCGGTTGAACAAA 59.621 50.000 13.24 0.00 0.00 2.83
75 76 1.096416 AAGACGGCGGTTGAACAAAA 58.904 45.000 13.24 0.00 0.00 2.44
76 77 0.661020 AGACGGCGGTTGAACAAAAG 59.339 50.000 13.24 0.00 0.00 2.27
77 78 0.658897 GACGGCGGTTGAACAAAAGA 59.341 50.000 13.24 0.00 0.00 2.52
78 79 1.064357 GACGGCGGTTGAACAAAAGAA 59.936 47.619 13.24 0.00 0.00 2.52
79 80 1.473278 ACGGCGGTTGAACAAAAGAAA 59.527 42.857 13.24 0.00 0.00 2.52
80 81 2.116366 CGGCGGTTGAACAAAAGAAAG 58.884 47.619 0.00 0.00 0.00 2.62
81 82 2.469826 GGCGGTTGAACAAAAGAAAGG 58.530 47.619 0.00 0.00 0.00 3.11
82 83 2.100087 GGCGGTTGAACAAAAGAAAGGA 59.900 45.455 0.00 0.00 0.00 3.36
83 84 3.429684 GGCGGTTGAACAAAAGAAAGGAA 60.430 43.478 0.00 0.00 0.00 3.36
84 85 4.368315 GCGGTTGAACAAAAGAAAGGAAT 58.632 39.130 0.00 0.00 0.00 3.01
85 86 4.444388 GCGGTTGAACAAAAGAAAGGAATC 59.556 41.667 0.00 0.00 0.00 2.52
86 87 5.587289 CGGTTGAACAAAAGAAAGGAATCA 58.413 37.500 0.00 0.00 0.00 2.57
87 88 6.039616 CGGTTGAACAAAAGAAAGGAATCAA 58.960 36.000 0.00 0.00 0.00 2.57
88 89 6.533367 CGGTTGAACAAAAGAAAGGAATCAAA 59.467 34.615 0.00 0.00 0.00 2.69
89 90 7.224557 CGGTTGAACAAAAGAAAGGAATCAAAT 59.775 33.333 0.00 0.00 0.00 2.32
90 91 8.551205 GGTTGAACAAAAGAAAGGAATCAAATC 58.449 33.333 0.00 0.00 0.00 2.17
91 92 9.097257 GTTGAACAAAAGAAAGGAATCAAATCA 57.903 29.630 0.00 0.00 0.00 2.57
92 93 9.664332 TTGAACAAAAGAAAGGAATCAAATCAA 57.336 25.926 0.00 0.00 0.00 2.57
93 94 9.835389 TGAACAAAAGAAAGGAATCAAATCAAT 57.165 25.926 0.00 0.00 0.00 2.57
95 96 9.835389 AACAAAAGAAAGGAATCAAATCAATGA 57.165 25.926 0.00 0.00 0.00 2.57
110 111 3.889815 TCAATGATGATTCTGGTGTCCC 58.110 45.455 0.00 0.00 0.00 4.46
111 112 2.615447 CAATGATGATTCTGGTGTCCCG 59.385 50.000 0.00 0.00 0.00 5.14
112 113 0.541392 TGATGATTCTGGTGTCCCGG 59.459 55.000 0.00 0.00 38.61 5.73
113 114 0.830648 GATGATTCTGGTGTCCCGGA 59.169 55.000 0.73 0.00 44.74 5.14
114 115 0.833287 ATGATTCTGGTGTCCCGGAG 59.167 55.000 0.73 0.00 46.89 4.63
115 116 0.252057 TGATTCTGGTGTCCCGGAGA 60.252 55.000 0.73 0.00 46.89 3.71
116 117 0.902531 GATTCTGGTGTCCCGGAGAA 59.097 55.000 0.73 2.66 46.89 2.87
117 118 1.486726 GATTCTGGTGTCCCGGAGAAT 59.513 52.381 12.29 12.29 46.89 2.40
118 119 2.241281 TTCTGGTGTCCCGGAGAATA 57.759 50.000 0.73 0.00 46.89 1.75
119 120 2.471815 TCTGGTGTCCCGGAGAATAT 57.528 50.000 0.73 0.00 41.42 1.28
120 121 2.039418 TCTGGTGTCCCGGAGAATATG 58.961 52.381 0.73 0.00 41.42 1.78
121 122 1.070758 CTGGTGTCCCGGAGAATATGG 59.929 57.143 0.73 0.00 39.78 2.74
122 123 0.250338 GGTGTCCCGGAGAATATGGC 60.250 60.000 0.73 0.00 0.00 4.40
123 124 0.759346 GTGTCCCGGAGAATATGGCT 59.241 55.000 0.73 0.00 0.00 4.75
124 125 1.141053 GTGTCCCGGAGAATATGGCTT 59.859 52.381 0.73 0.00 0.00 4.35
125 126 1.140852 TGTCCCGGAGAATATGGCTTG 59.859 52.381 0.73 0.00 0.00 4.01
126 127 1.416401 GTCCCGGAGAATATGGCTTGA 59.584 52.381 0.73 0.00 0.00 3.02
127 128 2.123589 TCCCGGAGAATATGGCTTGAA 58.876 47.619 0.73 0.00 0.00 2.69
128 129 2.158813 TCCCGGAGAATATGGCTTGAAC 60.159 50.000 0.73 0.00 0.00 3.18
129 130 1.867233 CCGGAGAATATGGCTTGAACG 59.133 52.381 0.00 0.00 0.00 3.95
130 131 1.867233 CGGAGAATATGGCTTGAACGG 59.133 52.381 0.00 0.00 0.00 4.44
131 132 2.483013 CGGAGAATATGGCTTGAACGGA 60.483 50.000 0.00 0.00 0.00 4.69
132 133 3.541632 GGAGAATATGGCTTGAACGGAA 58.458 45.455 0.00 0.00 0.00 4.30
133 134 3.312697 GGAGAATATGGCTTGAACGGAAC 59.687 47.826 0.00 0.00 0.00 3.62
134 135 3.938963 GAGAATATGGCTTGAACGGAACA 59.061 43.478 0.00 0.00 0.00 3.18
135 136 4.331968 AGAATATGGCTTGAACGGAACAA 58.668 39.130 0.00 0.00 0.00 2.83
136 137 4.156008 AGAATATGGCTTGAACGGAACAAC 59.844 41.667 0.00 0.00 0.00 3.32
137 138 1.686355 ATGGCTTGAACGGAACAACA 58.314 45.000 0.00 0.00 0.00 3.33
138 139 1.021202 TGGCTTGAACGGAACAACAG 58.979 50.000 0.00 0.00 0.00 3.16
139 140 1.305201 GGCTTGAACGGAACAACAGA 58.695 50.000 0.00 0.00 0.00 3.41
140 141 1.673920 GGCTTGAACGGAACAACAGAA 59.326 47.619 0.00 0.00 0.00 3.02
141 142 2.293399 GGCTTGAACGGAACAACAGAAT 59.707 45.455 0.00 0.00 0.00 2.40
142 143 3.555518 GCTTGAACGGAACAACAGAATC 58.444 45.455 0.00 0.00 0.00 2.52
143 144 3.251004 GCTTGAACGGAACAACAGAATCT 59.749 43.478 0.00 0.00 0.00 2.40
144 145 4.261197 GCTTGAACGGAACAACAGAATCTT 60.261 41.667 0.00 0.00 0.00 2.40
145 146 5.418310 TTGAACGGAACAACAGAATCTTC 57.582 39.130 0.00 0.00 0.00 2.87
146 147 4.447290 TGAACGGAACAACAGAATCTTCA 58.553 39.130 0.00 0.00 0.00 3.02
147 148 4.878971 TGAACGGAACAACAGAATCTTCAA 59.121 37.500 0.00 0.00 0.00 2.69
148 149 4.813296 ACGGAACAACAGAATCTTCAAC 57.187 40.909 0.00 0.00 0.00 3.18
149 150 4.196193 ACGGAACAACAGAATCTTCAACA 58.804 39.130 0.00 0.00 0.00 3.33
150 151 4.638421 ACGGAACAACAGAATCTTCAACAA 59.362 37.500 0.00 0.00 0.00 2.83
151 152 4.970003 CGGAACAACAGAATCTTCAACAAC 59.030 41.667 0.00 0.00 0.00 3.32
152 153 5.448496 CGGAACAACAGAATCTTCAACAACA 60.448 40.000 0.00 0.00 0.00 3.33
153 154 5.973565 GGAACAACAGAATCTTCAACAACAG 59.026 40.000 0.00 0.00 0.00 3.16
154 155 6.183360 GGAACAACAGAATCTTCAACAACAGA 60.183 38.462 0.00 0.00 0.00 3.41
155 156 6.369059 ACAACAGAATCTTCAACAACAGAG 57.631 37.500 0.00 0.00 0.00 3.35
156 157 5.882557 ACAACAGAATCTTCAACAACAGAGT 59.117 36.000 0.00 0.00 0.00 3.24
157 158 6.037610 ACAACAGAATCTTCAACAACAGAGTC 59.962 38.462 0.00 0.00 34.92 3.36
158 159 5.923204 ACAGAATCTTCAACAACAGAGTCT 58.077 37.500 0.00 0.00 43.53 3.24
159 160 5.988561 ACAGAATCTTCAACAACAGAGTCTC 59.011 40.000 0.00 0.00 41.40 3.36
160 161 5.987953 CAGAATCTTCAACAACAGAGTCTCA 59.012 40.000 1.94 0.00 41.40 3.27
161 162 6.145858 CAGAATCTTCAACAACAGAGTCTCAG 59.854 42.308 1.94 0.00 41.40 3.35
162 163 3.722147 TCTTCAACAACAGAGTCTCAGC 58.278 45.455 1.94 0.00 0.00 4.26
163 164 2.140065 TCAACAACAGAGTCTCAGCG 57.860 50.000 1.94 0.00 0.00 5.18
164 165 1.143305 CAACAACAGAGTCTCAGCGG 58.857 55.000 1.94 0.00 0.00 5.52
165 166 0.753262 AACAACAGAGTCTCAGCGGT 59.247 50.000 1.94 0.00 0.00 5.68
166 167 0.032678 ACAACAGAGTCTCAGCGGTG 59.967 55.000 8.67 8.67 0.00 4.94
167 168 0.668706 CAACAGAGTCTCAGCGGTGG 60.669 60.000 15.67 5.76 0.00 4.61
168 169 0.827925 AACAGAGTCTCAGCGGTGGA 60.828 55.000 15.67 8.20 0.00 4.02
169 170 0.827925 ACAGAGTCTCAGCGGTGGAA 60.828 55.000 15.67 0.00 0.00 3.53
170 171 0.318441 CAGAGTCTCAGCGGTGGAAA 59.682 55.000 15.67 0.00 0.00 3.13
171 172 0.318762 AGAGTCTCAGCGGTGGAAAC 59.681 55.000 15.67 10.40 0.00 2.78
172 173 0.318762 GAGTCTCAGCGGTGGAAACT 59.681 55.000 15.67 14.87 0.00 2.66
173 174 1.544691 GAGTCTCAGCGGTGGAAACTA 59.455 52.381 15.67 0.00 0.00 2.24
174 175 1.272769 AGTCTCAGCGGTGGAAACTAC 59.727 52.381 15.67 4.54 0.00 2.73
175 176 1.000506 GTCTCAGCGGTGGAAACTACA 59.999 52.381 15.67 0.00 0.00 2.74
176 177 1.899814 TCTCAGCGGTGGAAACTACAT 59.100 47.619 15.67 0.00 0.00 2.29
177 178 2.301870 TCTCAGCGGTGGAAACTACATT 59.698 45.455 15.67 0.00 0.00 2.71
178 179 3.512329 TCTCAGCGGTGGAAACTACATTA 59.488 43.478 15.67 0.00 0.00 1.90
179 180 4.020928 TCTCAGCGGTGGAAACTACATTAA 60.021 41.667 15.67 0.00 0.00 1.40
180 181 4.643463 TCAGCGGTGGAAACTACATTAAA 58.357 39.130 15.67 0.00 0.00 1.52
181 182 4.693566 TCAGCGGTGGAAACTACATTAAAG 59.306 41.667 15.67 0.00 0.00 1.85
182 183 4.007659 AGCGGTGGAAACTACATTAAAGG 58.992 43.478 0.00 0.00 0.00 3.11
183 184 4.004982 GCGGTGGAAACTACATTAAAGGA 58.995 43.478 0.00 0.00 0.00 3.36
184 185 4.094442 GCGGTGGAAACTACATTAAAGGAG 59.906 45.833 0.00 0.00 0.00 3.69
185 186 5.484715 CGGTGGAAACTACATTAAAGGAGA 58.515 41.667 0.00 0.00 0.00 3.71
186 187 6.113411 CGGTGGAAACTACATTAAAGGAGAT 58.887 40.000 0.00 0.00 0.00 2.75
187 188 6.598064 CGGTGGAAACTACATTAAAGGAGATT 59.402 38.462 0.00 0.00 0.00 2.40
188 189 7.201617 CGGTGGAAACTACATTAAAGGAGATTC 60.202 40.741 4.76 4.76 0.00 2.52
189 190 7.201617 GGTGGAAACTACATTAAAGGAGATTCG 60.202 40.741 6.79 0.00 0.00 3.34
190 191 7.548075 GTGGAAACTACATTAAAGGAGATTCGA 59.452 37.037 6.79 1.36 0.00 3.71
191 192 7.764443 TGGAAACTACATTAAAGGAGATTCGAG 59.236 37.037 6.79 0.00 0.00 4.04
192 193 7.224949 GGAAACTACATTAAAGGAGATTCGAGG 59.775 40.741 6.79 0.00 0.00 4.63
193 194 7.419711 AACTACATTAAAGGAGATTCGAGGA 57.580 36.000 0.00 0.00 0.00 3.71
194 195 7.045126 ACTACATTAAAGGAGATTCGAGGAG 57.955 40.000 0.00 0.00 0.00 3.69
195 196 6.834451 ACTACATTAAAGGAGATTCGAGGAGA 59.166 38.462 0.00 0.00 0.00 3.71
196 197 5.908341 ACATTAAAGGAGATTCGAGGAGAC 58.092 41.667 0.00 0.00 0.00 3.36
198 199 6.155393 ACATTAAAGGAGATTCGAGGAGACTT 59.845 38.462 0.00 0.00 44.43 3.01
199 200 4.464069 AAAGGAGATTCGAGGAGACTTG 57.536 45.455 0.00 0.00 44.43 3.16
200 201 2.383855 AGGAGATTCGAGGAGACTTGG 58.616 52.381 0.00 0.00 44.43 3.61
201 202 2.024846 AGGAGATTCGAGGAGACTTGGA 60.025 50.000 0.00 0.00 44.43 3.53
202 203 2.962421 GGAGATTCGAGGAGACTTGGAT 59.038 50.000 0.00 0.00 43.32 3.41
203 204 4.141135 AGGAGATTCGAGGAGACTTGGATA 60.141 45.833 0.00 0.00 40.45 2.59
204 205 4.770010 GGAGATTCGAGGAGACTTGGATAT 59.230 45.833 0.00 0.00 40.45 1.63
205 206 5.336372 GGAGATTCGAGGAGACTTGGATATG 60.336 48.000 0.00 0.00 40.45 1.78
206 207 5.144100 AGATTCGAGGAGACTTGGATATGT 58.856 41.667 0.00 0.00 40.45 2.29
207 208 4.655762 TTCGAGGAGACTTGGATATGTG 57.344 45.455 0.00 0.00 44.43 3.21
208 209 2.959030 TCGAGGAGACTTGGATATGTGG 59.041 50.000 0.00 0.00 44.43 4.17
209 210 2.959030 CGAGGAGACTTGGATATGTGGA 59.041 50.000 0.00 0.00 44.43 4.02
210 211 3.005261 CGAGGAGACTTGGATATGTGGAG 59.995 52.174 0.00 0.00 44.43 3.86
211 212 4.219115 GAGGAGACTTGGATATGTGGAGA 58.781 47.826 0.00 0.00 44.43 3.71
212 213 3.964031 AGGAGACTTGGATATGTGGAGAC 59.036 47.826 0.00 0.00 37.44 3.36
213 214 3.964031 GGAGACTTGGATATGTGGAGACT 59.036 47.826 0.00 0.00 0.00 3.24
214 215 4.202202 GGAGACTTGGATATGTGGAGACTG 60.202 50.000 0.00 0.00 0.00 3.51
215 216 3.708631 AGACTTGGATATGTGGAGACTGG 59.291 47.826 0.00 0.00 0.00 4.00
216 217 2.774234 ACTTGGATATGTGGAGACTGGG 59.226 50.000 0.00 0.00 0.00 4.45
217 218 1.806496 TGGATATGTGGAGACTGGGG 58.194 55.000 0.00 0.00 0.00 4.96
218 219 1.059913 GGATATGTGGAGACTGGGGG 58.940 60.000 0.00 0.00 0.00 5.40
232 233 3.782443 GGGGGTGCGACCTACCAG 61.782 72.222 5.48 0.00 40.03 4.00
233 234 3.001406 GGGGTGCGACCTACCAGT 61.001 66.667 5.48 0.00 40.03 4.00
234 235 2.590114 GGGGTGCGACCTACCAGTT 61.590 63.158 5.48 0.00 40.03 3.16
235 236 1.375523 GGGTGCGACCTACCAGTTG 60.376 63.158 5.48 0.00 40.03 3.16
236 237 1.370064 GGTGCGACCTACCAGTTGT 59.630 57.895 0.00 0.00 38.12 3.32
237 238 0.669625 GGTGCGACCTACCAGTTGTC 60.670 60.000 0.00 0.00 38.12 3.18
239 240 4.164252 CGACCTACCAGTTGTCGC 57.836 61.111 8.84 0.00 44.29 5.19
240 241 1.445582 CGACCTACCAGTTGTCGCC 60.446 63.158 8.84 0.00 44.29 5.54
241 242 1.079336 GACCTACCAGTTGTCGCCC 60.079 63.158 0.00 0.00 0.00 6.13
242 243 1.535687 ACCTACCAGTTGTCGCCCT 60.536 57.895 0.00 0.00 0.00 5.19
243 244 1.125711 ACCTACCAGTTGTCGCCCTT 61.126 55.000 0.00 0.00 0.00 3.95
244 245 0.391263 CCTACCAGTTGTCGCCCTTC 60.391 60.000 0.00 0.00 0.00 3.46
245 246 0.736325 CTACCAGTTGTCGCCCTTCG 60.736 60.000 0.00 0.00 40.15 3.79
246 247 2.162338 TACCAGTTGTCGCCCTTCGG 62.162 60.000 0.00 0.00 39.05 4.30
263 264 4.779733 GGGACCCAGGCCGAGAGA 62.780 72.222 5.33 0.00 0.00 3.10
264 265 2.444895 GGACCCAGGCCGAGAGAT 60.445 66.667 0.00 0.00 0.00 2.75
265 266 2.066999 GGACCCAGGCCGAGAGATT 61.067 63.158 0.00 0.00 0.00 2.40
266 267 1.627297 GGACCCAGGCCGAGAGATTT 61.627 60.000 0.00 0.00 0.00 2.17
267 268 0.179070 GACCCAGGCCGAGAGATTTC 60.179 60.000 0.00 0.00 0.00 2.17
268 269 1.227380 CCCAGGCCGAGAGATTTCG 60.227 63.158 0.00 0.00 40.18 3.46
269 270 1.884926 CCAGGCCGAGAGATTTCGC 60.885 63.158 0.00 0.00 39.19 4.70
270 271 1.884926 CAGGCCGAGAGATTTCGCC 60.885 63.158 0.00 0.00 39.19 5.54
271 272 2.589159 GGCCGAGAGATTTCGCCC 60.589 66.667 0.00 0.00 39.19 6.13
272 273 2.962253 GCCGAGAGATTTCGCCCG 60.962 66.667 0.00 0.00 39.19 6.13
273 274 2.494918 CCGAGAGATTTCGCCCGT 59.505 61.111 0.00 0.00 39.19 5.28
274 275 1.878522 CCGAGAGATTTCGCCCGTG 60.879 63.158 0.00 0.00 39.19 4.94
275 276 1.878522 CGAGAGATTTCGCCCGTGG 60.879 63.158 0.00 0.00 33.39 4.94
276 277 1.521681 GAGAGATTTCGCCCGTGGG 60.522 63.158 0.00 0.00 38.57 4.61
277 278 2.240162 GAGAGATTTCGCCCGTGGGT 62.240 60.000 6.82 0.00 37.65 4.51
278 279 1.376812 GAGATTTCGCCCGTGGGTT 60.377 57.895 6.82 0.00 37.65 4.11
279 280 0.958876 GAGATTTCGCCCGTGGGTTT 60.959 55.000 6.82 0.00 37.65 3.27
280 281 0.538746 AGATTTCGCCCGTGGGTTTT 60.539 50.000 6.82 0.00 37.65 2.43
281 282 0.315886 GATTTCGCCCGTGGGTTTTT 59.684 50.000 6.82 0.00 37.65 1.94
282 283 0.315886 ATTTCGCCCGTGGGTTTTTC 59.684 50.000 6.82 0.00 37.65 2.29
283 284 0.752376 TTTCGCCCGTGGGTTTTTCT 60.752 50.000 6.82 0.00 37.65 2.52
284 285 1.167781 TTCGCCCGTGGGTTTTTCTC 61.168 55.000 6.82 0.00 37.65 2.87
285 286 2.622962 CGCCCGTGGGTTTTTCTCC 61.623 63.158 6.82 0.00 37.65 3.71
286 287 2.273179 GCCCGTGGGTTTTTCTCCC 61.273 63.158 6.82 0.00 44.81 4.30
287 288 1.605451 CCCGTGGGTTTTTCTCCCC 60.605 63.158 0.00 0.00 44.00 4.81
288 289 1.458927 CCGTGGGTTTTTCTCCCCT 59.541 57.895 0.00 0.00 44.00 4.79
289 290 0.178973 CCGTGGGTTTTTCTCCCCTT 60.179 55.000 0.00 0.00 44.00 3.95
290 291 1.699730 CGTGGGTTTTTCTCCCCTTT 58.300 50.000 0.00 0.00 44.00 3.11
291 292 1.611977 CGTGGGTTTTTCTCCCCTTTC 59.388 52.381 0.00 0.00 44.00 2.62
292 293 1.968493 GTGGGTTTTTCTCCCCTTTCC 59.032 52.381 0.00 0.00 44.00 3.13
293 294 1.863581 TGGGTTTTTCTCCCCTTTCCT 59.136 47.619 0.00 0.00 44.00 3.36
294 295 2.248950 TGGGTTTTTCTCCCCTTTCCTT 59.751 45.455 0.00 0.00 44.00 3.36
295 296 3.311028 TGGGTTTTTCTCCCCTTTCCTTT 60.311 43.478 0.00 0.00 44.00 3.11
296 297 3.714798 GGGTTTTTCTCCCCTTTCCTTTT 59.285 43.478 0.00 0.00 39.08 2.27
297 298 4.165372 GGGTTTTTCTCCCCTTTCCTTTTT 59.835 41.667 0.00 0.00 39.08 1.94
298 299 5.365619 GGTTTTTCTCCCCTTTCCTTTTTC 58.634 41.667 0.00 0.00 0.00 2.29
299 300 5.130477 GGTTTTTCTCCCCTTTCCTTTTTCT 59.870 40.000 0.00 0.00 0.00 2.52
300 301 6.352737 GGTTTTTCTCCCCTTTCCTTTTTCTT 60.353 38.462 0.00 0.00 0.00 2.52
301 302 6.884472 TTTTCTCCCCTTTCCTTTTTCTTT 57.116 33.333 0.00 0.00 0.00 2.52
302 303 6.884472 TTTCTCCCCTTTCCTTTTTCTTTT 57.116 33.333 0.00 0.00 0.00 2.27
303 304 6.479972 TTCTCCCCTTTCCTTTTTCTTTTC 57.520 37.500 0.00 0.00 0.00 2.29
304 305 4.899457 TCTCCCCTTTCCTTTTTCTTTTCC 59.101 41.667 0.00 0.00 0.00 3.13
305 306 4.890988 TCCCCTTTCCTTTTTCTTTTCCT 58.109 39.130 0.00 0.00 0.00 3.36
306 307 5.285401 TCCCCTTTCCTTTTTCTTTTCCTT 58.715 37.500 0.00 0.00 0.00 3.36
307 308 5.729229 TCCCCTTTCCTTTTTCTTTTCCTTT 59.271 36.000 0.00 0.00 0.00 3.11
308 309 6.904093 TCCCCTTTCCTTTTTCTTTTCCTTTA 59.096 34.615 0.00 0.00 0.00 1.85
309 310 7.070696 TCCCCTTTCCTTTTTCTTTTCCTTTAG 59.929 37.037 0.00 0.00 0.00 1.85
310 311 7.147549 CCCCTTTCCTTTTTCTTTTCCTTTAGT 60.148 37.037 0.00 0.00 0.00 2.24
311 312 8.265055 CCCTTTCCTTTTTCTTTTCCTTTAGTT 58.735 33.333 0.00 0.00 0.00 2.24
312 313 9.667107 CCTTTCCTTTTTCTTTTCCTTTAGTTT 57.333 29.630 0.00 0.00 0.00 2.66
314 315 9.661563 TTTCCTTTTTCTTTTCCTTTAGTTTCC 57.338 29.630 0.00 0.00 0.00 3.13
315 316 8.603898 TCCTTTTTCTTTTCCTTTAGTTTCCT 57.396 30.769 0.00 0.00 0.00 3.36
316 317 8.692710 TCCTTTTTCTTTTCCTTTAGTTTCCTC 58.307 33.333 0.00 0.00 0.00 3.71
317 318 8.696374 CCTTTTTCTTTTCCTTTAGTTTCCTCT 58.304 33.333 0.00 0.00 0.00 3.69
326 327 9.877222 TTTCCTTTAGTTTCCTCTTATTTTCCT 57.123 29.630 0.00 0.00 0.00 3.36
327 328 9.516546 TTCCTTTAGTTTCCTCTTATTTTCCTC 57.483 33.333 0.00 0.00 0.00 3.71
328 329 8.665906 TCCTTTAGTTTCCTCTTATTTTCCTCA 58.334 33.333 0.00 0.00 0.00 3.86
329 330 9.467796 CCTTTAGTTTCCTCTTATTTTCCTCAT 57.532 33.333 0.00 0.00 0.00 2.90
336 337 8.980481 TTCCTCTTATTTTCCTCATTATGACC 57.020 34.615 0.00 0.00 0.00 4.02
337 338 7.217200 TCCTCTTATTTTCCTCATTATGACCG 58.783 38.462 0.00 0.00 0.00 4.79
338 339 7.070696 TCCTCTTATTTTCCTCATTATGACCGA 59.929 37.037 0.00 0.00 0.00 4.69
339 340 7.880195 CCTCTTATTTTCCTCATTATGACCGAT 59.120 37.037 0.00 0.00 0.00 4.18
340 341 9.277783 CTCTTATTTTCCTCATTATGACCGATT 57.722 33.333 0.00 0.00 0.00 3.34
341 342 9.627123 TCTTATTTTCCTCATTATGACCGATTT 57.373 29.630 0.00 0.00 0.00 2.17
344 345 6.449635 TTTCCTCATTATGACCGATTTTGG 57.550 37.500 0.00 0.00 0.00 3.28
354 355 2.264813 ACCGATTTTGGTCGATGTACG 58.735 47.619 0.00 0.00 44.06 3.67
355 356 2.264813 CCGATTTTGGTCGATGTACGT 58.735 47.619 0.00 0.00 44.06 3.57
356 357 3.119531 ACCGATTTTGGTCGATGTACGTA 60.120 43.478 0.00 0.00 44.06 3.57
357 358 4.046462 CCGATTTTGGTCGATGTACGTAT 58.954 43.478 0.00 0.00 44.06 3.06
358 359 4.505191 CCGATTTTGGTCGATGTACGTATT 59.495 41.667 0.00 0.00 44.06 1.89
359 360 5.420366 CGATTTTGGTCGATGTACGTATTG 58.580 41.667 0.00 0.00 44.06 1.90
360 361 4.587211 TTTTGGTCGATGTACGTATTGC 57.413 40.909 0.00 0.00 43.13 3.56
361 362 3.513680 TTGGTCGATGTACGTATTGCT 57.486 42.857 0.00 0.00 43.13 3.91
362 363 3.074504 TGGTCGATGTACGTATTGCTC 57.925 47.619 0.00 0.00 43.13 4.26
363 364 2.223641 TGGTCGATGTACGTATTGCTCC 60.224 50.000 0.00 0.00 43.13 4.70
364 365 2.391879 GTCGATGTACGTATTGCTCCC 58.608 52.381 0.00 0.00 43.13 4.30
365 366 2.034305 GTCGATGTACGTATTGCTCCCT 59.966 50.000 0.00 0.00 43.13 4.20
366 367 2.691526 TCGATGTACGTATTGCTCCCTT 59.308 45.455 0.00 0.00 43.13 3.95
367 368 3.050619 CGATGTACGTATTGCTCCCTTC 58.949 50.000 0.00 0.00 37.22 3.46
368 369 2.973694 TGTACGTATTGCTCCCTTCC 57.026 50.000 0.00 0.00 0.00 3.46
369 370 2.463752 TGTACGTATTGCTCCCTTCCT 58.536 47.619 0.00 0.00 0.00 3.36
370 371 3.634504 TGTACGTATTGCTCCCTTCCTA 58.365 45.455 0.00 0.00 0.00 2.94
371 372 4.220724 TGTACGTATTGCTCCCTTCCTAT 58.779 43.478 0.00 0.00 0.00 2.57
372 373 4.280174 TGTACGTATTGCTCCCTTCCTATC 59.720 45.833 0.00 0.00 0.00 2.08
373 374 3.305720 ACGTATTGCTCCCTTCCTATCA 58.694 45.455 0.00 0.00 0.00 2.15
374 375 3.904339 ACGTATTGCTCCCTTCCTATCAT 59.096 43.478 0.00 0.00 0.00 2.45
375 376 5.084519 ACGTATTGCTCCCTTCCTATCATA 58.915 41.667 0.00 0.00 0.00 2.15
376 377 5.542635 ACGTATTGCTCCCTTCCTATCATAA 59.457 40.000 0.00 0.00 0.00 1.90
377 378 6.213600 ACGTATTGCTCCCTTCCTATCATAAT 59.786 38.462 0.00 0.00 0.00 1.28
378 379 6.536582 CGTATTGCTCCCTTCCTATCATAATG 59.463 42.308 0.00 0.00 0.00 1.90
379 380 6.708885 ATTGCTCCCTTCCTATCATAATGA 57.291 37.500 0.00 0.00 0.00 2.57
380 381 6.514012 TTGCTCCCTTCCTATCATAATGAA 57.486 37.500 0.00 0.00 0.00 2.57
381 382 6.514012 TGCTCCCTTCCTATCATAATGAAA 57.486 37.500 0.00 0.00 0.00 2.69
382 383 6.910191 TGCTCCCTTCCTATCATAATGAAAA 58.090 36.000 0.00 0.00 0.00 2.29
383 384 7.353525 TGCTCCCTTCCTATCATAATGAAAAA 58.646 34.615 0.00 0.00 0.00 1.94
384 385 7.503566 TGCTCCCTTCCTATCATAATGAAAAAG 59.496 37.037 0.00 0.00 0.00 2.27
385 386 7.522889 GCTCCCTTCCTATCATAATGAAAAAGC 60.523 40.741 0.00 0.00 0.00 3.51
386 387 6.777580 TCCCTTCCTATCATAATGAAAAAGCC 59.222 38.462 0.00 0.00 0.00 4.35
387 388 6.015095 CCCTTCCTATCATAATGAAAAAGCCC 60.015 42.308 0.00 0.00 0.00 5.19
388 389 6.550854 CCTTCCTATCATAATGAAAAAGCCCA 59.449 38.462 0.00 0.00 0.00 5.36
389 390 7.255730 CCTTCCTATCATAATGAAAAAGCCCAG 60.256 40.741 0.00 0.00 0.00 4.45
390 391 6.070656 TCCTATCATAATGAAAAAGCCCAGG 58.929 40.000 0.00 0.00 0.00 4.45
391 392 5.835280 CCTATCATAATGAAAAAGCCCAGGT 59.165 40.000 0.00 0.00 0.00 4.00
392 393 6.324770 CCTATCATAATGAAAAAGCCCAGGTT 59.675 38.462 0.00 0.00 0.00 3.50
393 394 6.625532 ATCATAATGAAAAAGCCCAGGTTT 57.374 33.333 0.00 0.00 34.60 3.27
394 395 5.792741 TCATAATGAAAAAGCCCAGGTTTG 58.207 37.500 0.00 0.00 33.41 2.93
395 396 2.549064 ATGAAAAAGCCCAGGTTTGC 57.451 45.000 0.00 0.00 33.41 3.68
396 397 1.494960 TGAAAAAGCCCAGGTTTGCT 58.505 45.000 0.00 0.00 40.17 3.91
397 398 1.138661 TGAAAAAGCCCAGGTTTGCTG 59.861 47.619 0.00 0.00 38.00 4.41
398 399 0.469494 AAAAAGCCCAGGTTTGCTGG 59.531 50.000 0.00 0.00 38.00 4.85
399 400 0.690744 AAAAGCCCAGGTTTGCTGGT 60.691 50.000 0.00 0.00 40.23 4.00
400 401 1.115326 AAAGCCCAGGTTTGCTGGTC 61.115 55.000 0.00 0.00 40.23 4.02
401 402 2.011617 AAGCCCAGGTTTGCTGGTCT 62.012 55.000 0.00 0.00 40.23 3.85
402 403 1.531602 GCCCAGGTTTGCTGGTCTT 60.532 57.895 0.00 0.00 40.23 3.01
403 404 1.527433 GCCCAGGTTTGCTGGTCTTC 61.527 60.000 0.00 0.00 40.23 2.87
404 405 0.895559 CCCAGGTTTGCTGGTCTTCC 60.896 60.000 0.00 0.00 40.23 3.46
405 406 0.111253 CCAGGTTTGCTGGTCTTCCT 59.889 55.000 0.00 0.00 37.22 3.36
406 407 1.479389 CCAGGTTTGCTGGTCTTCCTT 60.479 52.381 0.00 0.00 37.22 3.36
407 408 1.882623 CAGGTTTGCTGGTCTTCCTTC 59.117 52.381 0.00 0.00 34.23 3.46
408 409 1.494721 AGGTTTGCTGGTCTTCCTTCA 59.505 47.619 0.00 0.00 34.23 3.02
409 410 2.091885 AGGTTTGCTGGTCTTCCTTCAA 60.092 45.455 0.00 0.00 34.23 2.69
410 411 2.693074 GGTTTGCTGGTCTTCCTTCAAA 59.307 45.455 0.00 0.00 35.29 2.69
411 412 3.132111 GGTTTGCTGGTCTTCCTTCAAAA 59.868 43.478 0.00 0.00 37.37 2.44
412 413 4.382577 GGTTTGCTGGTCTTCCTTCAAAAA 60.383 41.667 0.00 0.00 37.37 1.94
450 451 5.938438 TTTTTGTTTTGAGCAAAGCAACT 57.062 30.435 19.94 0.00 46.16 3.16
452 453 7.608308 TTTTTGTTTTGAGCAAAGCAACTAT 57.392 28.000 19.94 0.00 46.16 2.12
453 454 6.826893 TTTGTTTTGAGCAAAGCAACTATC 57.173 33.333 19.94 0.00 46.16 2.08
454 455 4.870363 TGTTTTGAGCAAAGCAACTATCC 58.130 39.130 9.55 0.00 38.31 2.59
455 456 4.340666 TGTTTTGAGCAAAGCAACTATCCA 59.659 37.500 9.55 0.00 38.31 3.41
456 457 5.010922 TGTTTTGAGCAAAGCAACTATCCAT 59.989 36.000 9.55 0.00 38.31 3.41
457 458 6.208402 TGTTTTGAGCAAAGCAACTATCCATA 59.792 34.615 9.55 0.00 38.31 2.74
458 459 6.441093 TTTGAGCAAAGCAACTATCCATAG 57.559 37.500 0.00 0.00 36.46 2.23
459 460 3.879295 TGAGCAAAGCAACTATCCATAGC 59.121 43.478 0.00 0.00 33.68 2.97
460 461 4.133078 GAGCAAAGCAACTATCCATAGCT 58.867 43.478 0.00 0.00 37.08 3.32
461 462 4.530875 AGCAAAGCAACTATCCATAGCTT 58.469 39.130 0.00 0.00 46.49 3.74
462 463 5.684704 AGCAAAGCAACTATCCATAGCTTA 58.315 37.500 0.00 0.00 44.03 3.09
473 474 3.581101 TCCATAGCTTAGCTGGATGACT 58.419 45.455 17.97 0.00 40.10 3.41
474 475 3.969976 TCCATAGCTTAGCTGGATGACTT 59.030 43.478 17.97 0.00 40.10 3.01
480 481 3.443037 CTTAGCTGGATGACTTGACTCG 58.557 50.000 0.00 0.00 0.00 4.18
616 617 0.543277 TCCACTCAGTGATCCATGCC 59.457 55.000 6.30 0.00 35.23 4.40
617 618 0.465097 CCACTCAGTGATCCATGCCC 60.465 60.000 6.30 0.00 35.23 5.36
618 619 0.253894 CACTCAGTGATCCATGCCCA 59.746 55.000 0.00 0.00 35.23 5.36
619 620 1.133884 CACTCAGTGATCCATGCCCAT 60.134 52.381 0.00 0.00 35.23 4.00
620 621 1.133884 ACTCAGTGATCCATGCCCATG 60.134 52.381 0.00 1.28 38.51 3.66
621 622 0.466739 TCAGTGATCCATGCCCATGC 60.467 55.000 2.75 0.00 37.49 4.06
668 686 3.986374 CAAATAATGCACGACGCCA 57.014 47.368 0.00 0.00 41.33 5.69
669 687 2.254918 CAAATAATGCACGACGCCAA 57.745 45.000 0.00 0.00 41.33 4.52
670 688 2.796304 CAAATAATGCACGACGCCAAT 58.204 42.857 0.00 0.00 41.33 3.16
739 784 2.285220 CAGGCGACCTTGATAATTCACG 59.715 50.000 0.00 0.00 0.00 4.35
807 870 4.666253 AAGCCACATGCCACCGCT 62.666 61.111 0.00 0.00 42.71 5.52
811 874 4.409218 CACATGCCACCGCTGCAC 62.409 66.667 0.00 0.00 42.38 4.57
919 986 4.530857 CGATCCCACTCCCACGCC 62.531 72.222 0.00 0.00 0.00 5.68
920 987 3.399181 GATCCCACTCCCACGCCA 61.399 66.667 0.00 0.00 0.00 5.69
921 988 3.682292 GATCCCACTCCCACGCCAC 62.682 68.421 0.00 0.00 0.00 5.01
1149 1216 1.892862 CTACCGCTCCCTCGACGAT 60.893 63.158 0.00 0.00 0.00 3.73
1150 1217 2.119147 CTACCGCTCCCTCGACGATG 62.119 65.000 0.00 0.00 0.00 3.84
1151 1218 4.271816 CCGCTCCCTCGACGATGG 62.272 72.222 12.50 12.50 0.00 3.51
1395 1465 3.626924 GCCTCCACCACCGACACT 61.627 66.667 0.00 0.00 0.00 3.55
1533 1603 2.597510 AAGGGCAGGCCGTGTTTC 60.598 61.111 7.51 0.00 36.85 2.78
1562 1632 4.681978 GCACCGGCCAAGAGACGT 62.682 66.667 0.00 0.00 0.00 4.34
1563 1633 2.030562 CACCGGCCAAGAGACGTT 59.969 61.111 0.00 0.00 0.00 3.99
1665 1735 3.787001 CCGAGGAAGCCCAGGACC 61.787 72.222 0.00 0.00 35.38 4.46
1707 1777 3.291101 GACGTTGCCGGAGCTACCA 62.291 63.158 5.05 0.00 41.06 3.25
1987 2058 1.002502 GCCACGGTTTTCTAGCCCT 60.003 57.895 0.00 0.00 0.00 5.19
2025 2097 9.632807 AAAAAGGGCAAAAGTTGTAAAAATTTC 57.367 25.926 0.00 0.00 0.00 2.17
2037 2109 7.230712 AGTTGTAAAAATTTCGAAGGACCTGAT 59.769 33.333 0.00 0.00 0.00 2.90
2038 2110 8.508875 GTTGTAAAAATTTCGAAGGACCTGATA 58.491 33.333 0.00 0.00 0.00 2.15
2039 2111 8.624367 TGTAAAAATTTCGAAGGACCTGATAA 57.376 30.769 0.00 0.00 0.00 1.75
2040 2112 8.508875 TGTAAAAATTTCGAAGGACCTGATAAC 58.491 33.333 0.00 0.00 0.00 1.89
2041 2113 7.761038 AAAAATTTCGAAGGACCTGATAACT 57.239 32.000 0.00 0.00 0.00 2.24
2042 2114 8.857694 AAAAATTTCGAAGGACCTGATAACTA 57.142 30.769 0.00 0.00 0.00 2.24
2043 2115 8.857694 AAAATTTCGAAGGACCTGATAACTAA 57.142 30.769 0.00 0.00 0.00 2.24
2044 2116 8.857694 AAATTTCGAAGGACCTGATAACTAAA 57.142 30.769 0.00 0.00 0.00 1.85
2045 2117 8.857694 AATTTCGAAGGACCTGATAACTAAAA 57.142 30.769 0.00 0.00 0.00 1.52
2046 2118 9.462606 AATTTCGAAGGACCTGATAACTAAAAT 57.537 29.630 0.00 0.00 0.00 1.82
2047 2119 7.843490 TTCGAAGGACCTGATAACTAAAATG 57.157 36.000 0.00 0.00 0.00 2.32
2048 2120 6.942976 TCGAAGGACCTGATAACTAAAATGT 58.057 36.000 0.00 0.00 0.00 2.71
2049 2121 7.391620 TCGAAGGACCTGATAACTAAAATGTT 58.608 34.615 0.00 0.00 0.00 2.71
2050 2122 7.548075 TCGAAGGACCTGATAACTAAAATGTTC 59.452 37.037 0.00 0.00 0.00 3.18
2051 2123 7.549488 CGAAGGACCTGATAACTAAAATGTTCT 59.451 37.037 0.00 0.00 0.00 3.01
2052 2124 9.232473 GAAGGACCTGATAACTAAAATGTTCTT 57.768 33.333 0.00 0.00 0.00 2.52
2053 2125 9.588096 AAGGACCTGATAACTAAAATGTTCTTT 57.412 29.630 0.00 0.00 0.00 2.52
2054 2126 9.588096 AGGACCTGATAACTAAAATGTTCTTTT 57.412 29.630 0.00 0.00 0.00 2.27
2091 2163 6.439675 AAAATGTTCTTGTTGCTTGCATTT 57.560 29.167 0.00 0.00 36.87 2.32
2132 2204 9.539825 TGTTTGTATTATGTGCAAAATTTGTCT 57.460 25.926 7.60 0.00 42.74 3.41
2168 2240 5.609423 TGGTTGTCCAAAATCAATTTCAGG 58.391 37.500 0.00 0.00 41.25 3.86
2175 2247 6.642540 GTCCAAAATCAATTTCAGGTTCTCAC 59.357 38.462 6.74 0.00 0.00 3.51
2181 2253 2.839486 TTTCAGGTTCTCACGCAGAT 57.161 45.000 0.00 0.00 0.00 2.90
2259 2339 2.301870 ACGTACCAGTTCACATGGACAT 59.698 45.455 0.00 0.00 40.51 3.06
2292 3345 4.864704 AACCAACGGAGCATTTGTTAAT 57.135 36.364 0.00 0.00 0.00 1.40
2384 3447 9.840427 AAAAGAGAAAATATCAATGTTGGTACG 57.160 29.630 0.00 0.00 0.00 3.67
2385 3448 8.561738 AAGAGAAAATATCAATGTTGGTACGT 57.438 30.769 0.00 0.00 0.00 3.57
2446 3509 5.919348 AGATAGAATGTTGATGGTGGGAT 57.081 39.130 0.00 0.00 0.00 3.85
2461 3524 3.314357 GGTGGGATGCGGATTTAGTAAAC 59.686 47.826 0.00 0.00 0.00 2.01
2462 3525 3.942748 GTGGGATGCGGATTTAGTAAACA 59.057 43.478 0.00 0.00 0.00 2.83
2468 5036 5.968528 TGCGGATTTAGTAAACATGGTTT 57.031 34.783 0.00 0.00 0.00 3.27
2471 5039 6.151985 TGCGGATTTAGTAAACATGGTTTCAT 59.848 34.615 0.00 0.00 0.00 2.57
2545 5281 9.731819 TGATCTCTTTTAACATACATAGTCGAC 57.268 33.333 7.70 7.70 0.00 4.20
2547 5283 7.486647 TCTCTTTTAACATACATAGTCGACCC 58.513 38.462 13.01 0.00 0.00 4.46
2557 5293 3.243873 ACATAGTCGACCCGTATACTCGA 60.244 47.826 13.01 10.62 34.14 4.04
2559 5295 0.234365 GTCGACCCGTATACTCGAGC 59.766 60.000 13.61 7.50 37.12 5.03
2565 5301 1.064505 CCCGTATACTCGAGCGTGAAA 59.935 52.381 13.61 0.00 0.00 2.69
2607 5345 8.543774 ACATATGTGGTATTTTGGGCAAAAATA 58.456 29.630 14.42 14.42 44.84 1.40
2654 5393 8.424274 AAAACTTTTCATGAACAATGAGAACC 57.576 30.769 7.89 0.00 46.01 3.62
2808 5624 3.319238 GATGCGTCCATCCGTTAAAAG 57.681 47.619 0.00 0.00 41.62 2.27
2897 5715 0.242286 CGATGAGATACCCGGCTGAG 59.758 60.000 0.00 0.00 0.00 3.35
2898 5716 0.605589 GATGAGATACCCGGCTGAGG 59.394 60.000 0.00 0.00 0.00 3.86
2899 5717 1.476007 ATGAGATACCCGGCTGAGGC 61.476 60.000 0.00 0.00 37.82 4.70
2909 5727 2.759795 GCTGAGGCCTCCTTTGGT 59.240 61.111 29.95 0.00 31.76 3.67
2910 5728 1.075659 GCTGAGGCCTCCTTTGGTT 59.924 57.895 29.95 0.00 31.76 3.67
2911 5729 0.540597 GCTGAGGCCTCCTTTGGTTT 60.541 55.000 29.95 0.00 31.76 3.27
2912 5730 1.251251 CTGAGGCCTCCTTTGGTTTG 58.749 55.000 29.95 5.07 31.76 2.93
2913 5731 0.555769 TGAGGCCTCCTTTGGTTTGT 59.444 50.000 29.95 0.00 31.76 2.83
2914 5732 1.777878 TGAGGCCTCCTTTGGTTTGTA 59.222 47.619 29.95 3.38 31.76 2.41
2915 5733 2.224769 TGAGGCCTCCTTTGGTTTGTAG 60.225 50.000 29.95 0.00 31.76 2.74
2916 5734 1.075536 AGGCCTCCTTTGGTTTGTAGG 59.924 52.381 0.00 0.00 0.00 3.18
2917 5735 1.074889 GGCCTCCTTTGGTTTGTAGGA 59.925 52.381 0.00 0.00 36.65 2.94
2918 5736 2.490168 GGCCTCCTTTGGTTTGTAGGAA 60.490 50.000 0.00 0.00 37.61 3.36
2919 5737 3.431415 GCCTCCTTTGGTTTGTAGGAAT 58.569 45.455 0.00 0.00 37.61 3.01
2920 5738 3.444034 GCCTCCTTTGGTTTGTAGGAATC 59.556 47.826 0.00 0.00 37.61 2.52
2921 5739 4.811063 GCCTCCTTTGGTTTGTAGGAATCT 60.811 45.833 0.00 0.00 37.61 2.40
2922 5740 5.325239 CCTCCTTTGGTTTGTAGGAATCTT 58.675 41.667 0.00 0.00 37.61 2.40
2923 5741 5.183904 CCTCCTTTGGTTTGTAGGAATCTTG 59.816 44.000 0.00 0.00 37.61 3.02
2924 5742 5.701224 TCCTTTGGTTTGTAGGAATCTTGT 58.299 37.500 0.00 0.00 35.20 3.16
2925 5743 6.843752 TCCTTTGGTTTGTAGGAATCTTGTA 58.156 36.000 0.00 0.00 35.20 2.41
2926 5744 7.291566 TCCTTTGGTTTGTAGGAATCTTGTAA 58.708 34.615 0.00 0.00 35.20 2.41
2927 5745 7.447238 TCCTTTGGTTTGTAGGAATCTTGTAAG 59.553 37.037 0.00 0.00 35.20 2.34
2928 5746 7.447238 CCTTTGGTTTGTAGGAATCTTGTAAGA 59.553 37.037 0.00 0.00 39.78 2.10
2929 5747 8.754991 TTTGGTTTGTAGGAATCTTGTAAGAA 57.245 30.769 0.00 0.00 38.77 2.52
2930 5748 8.934023 TTGGTTTGTAGGAATCTTGTAAGAAT 57.066 30.769 0.00 0.00 38.77 2.40
2931 5749 8.934023 TGGTTTGTAGGAATCTTGTAAGAATT 57.066 30.769 0.00 0.00 38.77 2.17
2932 5750 9.362151 TGGTTTGTAGGAATCTTGTAAGAATTT 57.638 29.630 0.00 0.00 38.77 1.82
2933 5751 9.841880 GGTTTGTAGGAATCTTGTAAGAATTTC 57.158 33.333 0.00 0.00 38.77 2.17
2979 5797 5.734031 AAATTCCTATGGAGCCCTTTAGT 57.266 39.130 0.00 0.00 31.21 2.24
2980 5798 5.734031 AATTCCTATGGAGCCCTTTAGTT 57.266 39.130 0.00 0.00 31.21 2.24
2981 5799 5.734031 ATTCCTATGGAGCCCTTTAGTTT 57.266 39.130 0.00 0.00 31.21 2.66
2982 5800 6.841781 ATTCCTATGGAGCCCTTTAGTTTA 57.158 37.500 0.00 0.00 31.21 2.01
2983 5801 6.841781 TTCCTATGGAGCCCTTTAGTTTAT 57.158 37.500 0.00 0.00 31.21 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.605457 GCTTACTGGGTTTTGCCAAGC 60.605 52.381 0.00 0.00 42.33 4.01
6 7 1.963515 AGCTTACTGGGTTTTGCCAAG 59.036 47.619 0.00 0.00 44.25 3.61
7 8 1.960689 GAGCTTACTGGGTTTTGCCAA 59.039 47.619 0.00 0.00 39.65 4.52
8 9 1.133637 TGAGCTTACTGGGTTTTGCCA 60.134 47.619 0.00 0.00 39.65 4.92
9 10 1.616159 TGAGCTTACTGGGTTTTGCC 58.384 50.000 0.00 0.00 0.00 4.52
10 11 3.726291 TTTGAGCTTACTGGGTTTTGC 57.274 42.857 0.00 0.00 0.00 3.68
11 12 5.299279 TCTCTTTTGAGCTTACTGGGTTTTG 59.701 40.000 0.00 0.00 45.83 2.44
12 13 5.445964 TCTCTTTTGAGCTTACTGGGTTTT 58.554 37.500 0.00 0.00 45.83 2.43
13 14 5.048846 TCTCTTTTGAGCTTACTGGGTTT 57.951 39.130 0.00 0.00 45.83 3.27
14 15 4.706842 TCTCTTTTGAGCTTACTGGGTT 57.293 40.909 0.00 0.00 45.83 4.11
15 16 4.042187 ACATCTCTTTTGAGCTTACTGGGT 59.958 41.667 0.00 0.00 45.83 4.51
16 17 4.394300 CACATCTCTTTTGAGCTTACTGGG 59.606 45.833 0.00 0.00 45.83 4.45
17 18 4.394300 CCACATCTCTTTTGAGCTTACTGG 59.606 45.833 0.00 0.00 45.83 4.00
18 19 5.240891 TCCACATCTCTTTTGAGCTTACTG 58.759 41.667 0.00 0.00 45.83 2.74
19 20 5.489792 TCCACATCTCTTTTGAGCTTACT 57.510 39.130 0.00 0.00 45.83 2.24
20 21 7.712639 TGATATCCACATCTCTTTTGAGCTTAC 59.287 37.037 0.00 0.00 45.83 2.34
21 22 7.795047 TGATATCCACATCTCTTTTGAGCTTA 58.205 34.615 0.00 0.00 45.83 3.09
22 23 6.656902 TGATATCCACATCTCTTTTGAGCTT 58.343 36.000 0.00 0.00 45.83 3.74
23 24 6.244552 TGATATCCACATCTCTTTTGAGCT 57.755 37.500 0.00 0.00 45.83 4.09
24 25 6.932356 TTGATATCCACATCTCTTTTGAGC 57.068 37.500 0.00 0.00 45.83 4.26
26 27 7.275183 ACGATTGATATCCACATCTCTTTTGA 58.725 34.615 0.00 0.00 0.00 2.69
27 28 7.440556 AGACGATTGATATCCACATCTCTTTTG 59.559 37.037 0.00 0.00 0.00 2.44
28 29 7.504403 AGACGATTGATATCCACATCTCTTTT 58.496 34.615 0.00 0.00 0.00 2.27
29 30 7.060383 AGACGATTGATATCCACATCTCTTT 57.940 36.000 0.00 0.00 0.00 2.52
30 31 6.295011 GGAGACGATTGATATCCACATCTCTT 60.295 42.308 15.21 0.05 0.00 2.85
31 32 5.184864 GGAGACGATTGATATCCACATCTCT 59.815 44.000 15.21 11.20 0.00 3.10
32 33 5.047731 TGGAGACGATTGATATCCACATCTC 60.048 44.000 0.00 6.44 35.16 2.75
33 34 4.835056 TGGAGACGATTGATATCCACATCT 59.165 41.667 0.00 0.00 35.16 2.90
34 35 5.139435 TGGAGACGATTGATATCCACATC 57.861 43.478 0.00 0.00 35.16 3.06
35 36 5.305386 TCTTGGAGACGATTGATATCCACAT 59.695 40.000 0.00 0.00 39.70 3.21
36 37 4.649218 TCTTGGAGACGATTGATATCCACA 59.351 41.667 0.00 0.00 39.70 4.17
37 38 4.985409 GTCTTGGAGACGATTGATATCCAC 59.015 45.833 0.00 0.00 39.70 4.02
38 39 5.201713 GTCTTGGAGACGATTGATATCCA 57.798 43.478 0.00 0.00 35.28 3.41
50 51 2.027625 CAACCGCCGTCTTGGAGAC 61.028 63.158 0.00 0.00 40.56 3.36
51 52 1.750341 TTCAACCGCCGTCTTGGAGA 61.750 55.000 0.00 0.00 40.56 3.71
52 53 1.301401 TTCAACCGCCGTCTTGGAG 60.301 57.895 0.00 0.00 42.00 3.86
53 54 1.595929 GTTCAACCGCCGTCTTGGA 60.596 57.895 0.00 0.00 42.00 3.53
54 55 1.440938 TTGTTCAACCGCCGTCTTGG 61.441 55.000 0.00 0.00 42.50 3.61
55 56 0.378962 TTTGTTCAACCGCCGTCTTG 59.621 50.000 0.00 0.00 0.00 3.02
56 57 1.064952 CTTTTGTTCAACCGCCGTCTT 59.935 47.619 0.00 0.00 0.00 3.01
57 58 0.661020 CTTTTGTTCAACCGCCGTCT 59.339 50.000 0.00 0.00 0.00 4.18
58 59 0.658897 TCTTTTGTTCAACCGCCGTC 59.341 50.000 0.00 0.00 0.00 4.79
59 60 1.096416 TTCTTTTGTTCAACCGCCGT 58.904 45.000 0.00 0.00 0.00 5.68
60 61 2.116366 CTTTCTTTTGTTCAACCGCCG 58.884 47.619 0.00 0.00 0.00 6.46
61 62 2.100087 TCCTTTCTTTTGTTCAACCGCC 59.900 45.455 0.00 0.00 0.00 6.13
62 63 3.430333 TCCTTTCTTTTGTTCAACCGC 57.570 42.857 0.00 0.00 0.00 5.68
63 64 5.587289 TGATTCCTTTCTTTTGTTCAACCG 58.413 37.500 0.00 0.00 0.00 4.44
64 65 7.841915 TTTGATTCCTTTCTTTTGTTCAACC 57.158 32.000 0.00 0.00 0.00 3.77
65 66 9.097257 TGATTTGATTCCTTTCTTTTGTTCAAC 57.903 29.630 0.00 0.00 0.00 3.18
66 67 9.664332 TTGATTTGATTCCTTTCTTTTGTTCAA 57.336 25.926 0.00 0.00 0.00 2.69
67 68 9.835389 ATTGATTTGATTCCTTTCTTTTGTTCA 57.165 25.926 0.00 0.00 0.00 3.18
69 70 9.835389 TCATTGATTTGATTCCTTTCTTTTGTT 57.165 25.926 0.00 0.00 0.00 2.83
84 85 8.767438 GGGACACCAGAATCATCATTGATTTGA 61.767 40.741 0.00 0.00 43.31 2.69
85 86 6.682113 GGGACACCAGAATCATCATTGATTTG 60.682 42.308 0.00 0.95 43.31 2.32
86 87 5.361857 GGGACACCAGAATCATCATTGATTT 59.638 40.000 0.00 0.00 43.31 2.17
87 88 4.891756 GGGACACCAGAATCATCATTGATT 59.108 41.667 0.00 1.02 44.61 2.57
88 89 4.467769 GGGACACCAGAATCATCATTGAT 58.532 43.478 0.00 0.00 39.48 2.57
89 90 3.682436 CGGGACACCAGAATCATCATTGA 60.682 47.826 0.00 0.00 36.13 2.57
90 91 2.615447 CGGGACACCAGAATCATCATTG 59.385 50.000 0.00 0.00 36.13 2.82
91 92 2.421952 CCGGGACACCAGAATCATCATT 60.422 50.000 0.00 0.00 36.13 2.57
92 93 1.141657 CCGGGACACCAGAATCATCAT 59.858 52.381 0.00 0.00 36.13 2.45
93 94 0.541392 CCGGGACACCAGAATCATCA 59.459 55.000 0.00 0.00 36.13 3.07
94 95 0.830648 TCCGGGACACCAGAATCATC 59.169 55.000 0.00 0.00 36.13 2.92
95 96 0.833287 CTCCGGGACACCAGAATCAT 59.167 55.000 0.00 0.00 36.13 2.45
96 97 0.252057 TCTCCGGGACACCAGAATCA 60.252 55.000 0.00 0.00 36.13 2.57
97 98 0.902531 TTCTCCGGGACACCAGAATC 59.097 55.000 0.00 0.00 36.13 2.52
98 99 1.584724 ATTCTCCGGGACACCAGAAT 58.415 50.000 0.00 4.67 35.67 2.40
99 100 2.241281 TATTCTCCGGGACACCAGAA 57.759 50.000 0.00 1.96 34.43 3.02
100 101 2.039418 CATATTCTCCGGGACACCAGA 58.961 52.381 0.00 0.00 36.13 3.86
101 102 1.070758 CCATATTCTCCGGGACACCAG 59.929 57.143 0.00 0.00 36.13 4.00
102 103 1.128200 CCATATTCTCCGGGACACCA 58.872 55.000 0.00 0.00 36.13 4.17
103 104 0.250338 GCCATATTCTCCGGGACACC 60.250 60.000 0.00 0.00 0.00 4.16
104 105 0.759346 AGCCATATTCTCCGGGACAC 59.241 55.000 0.00 0.00 0.00 3.67
105 106 1.140852 CAAGCCATATTCTCCGGGACA 59.859 52.381 0.00 0.00 0.00 4.02
106 107 1.416401 TCAAGCCATATTCTCCGGGAC 59.584 52.381 0.00 0.00 0.00 4.46
107 108 1.801242 TCAAGCCATATTCTCCGGGA 58.199 50.000 0.00 0.00 0.00 5.14
108 109 2.222027 GTTCAAGCCATATTCTCCGGG 58.778 52.381 0.00 0.00 0.00 5.73
109 110 1.867233 CGTTCAAGCCATATTCTCCGG 59.133 52.381 0.00 0.00 0.00 5.14
110 111 1.867233 CCGTTCAAGCCATATTCTCCG 59.133 52.381 0.00 0.00 0.00 4.63
111 112 3.194005 TCCGTTCAAGCCATATTCTCC 57.806 47.619 0.00 0.00 0.00 3.71
112 113 3.938963 TGTTCCGTTCAAGCCATATTCTC 59.061 43.478 0.00 0.00 0.00 2.87
113 114 3.950397 TGTTCCGTTCAAGCCATATTCT 58.050 40.909 0.00 0.00 0.00 2.40
114 115 4.083003 TGTTGTTCCGTTCAAGCCATATTC 60.083 41.667 0.00 0.00 0.00 1.75
115 116 3.823873 TGTTGTTCCGTTCAAGCCATATT 59.176 39.130 0.00 0.00 0.00 1.28
116 117 3.417101 TGTTGTTCCGTTCAAGCCATAT 58.583 40.909 0.00 0.00 0.00 1.78
117 118 2.811431 CTGTTGTTCCGTTCAAGCCATA 59.189 45.455 0.00 0.00 0.00 2.74
118 119 1.608590 CTGTTGTTCCGTTCAAGCCAT 59.391 47.619 0.00 0.00 0.00 4.40
119 120 1.021202 CTGTTGTTCCGTTCAAGCCA 58.979 50.000 0.00 0.00 0.00 4.75
120 121 1.305201 TCTGTTGTTCCGTTCAAGCC 58.695 50.000 0.00 0.00 0.00 4.35
121 122 3.251004 AGATTCTGTTGTTCCGTTCAAGC 59.749 43.478 0.00 0.00 0.00 4.01
122 123 5.007626 TGAAGATTCTGTTGTTCCGTTCAAG 59.992 40.000 0.00 0.00 0.00 3.02
123 124 4.878971 TGAAGATTCTGTTGTTCCGTTCAA 59.121 37.500 0.00 0.00 0.00 2.69
124 125 4.447290 TGAAGATTCTGTTGTTCCGTTCA 58.553 39.130 0.00 0.00 0.00 3.18
125 126 5.205565 GTTGAAGATTCTGTTGTTCCGTTC 58.794 41.667 0.00 0.00 0.00 3.95
126 127 4.638421 TGTTGAAGATTCTGTTGTTCCGTT 59.362 37.500 0.00 0.00 0.00 4.44
127 128 4.196193 TGTTGAAGATTCTGTTGTTCCGT 58.804 39.130 0.00 0.00 0.00 4.69
128 129 4.811555 TGTTGAAGATTCTGTTGTTCCG 57.188 40.909 0.00 0.00 0.00 4.30
129 130 5.890334 TGTTGTTGAAGATTCTGTTGTTCC 58.110 37.500 0.00 0.00 0.00 3.62
130 131 6.785191 TCTGTTGTTGAAGATTCTGTTGTTC 58.215 36.000 0.00 0.00 0.00 3.18
131 132 6.375455 ACTCTGTTGTTGAAGATTCTGTTGTT 59.625 34.615 0.00 0.00 0.00 2.83
132 133 5.882557 ACTCTGTTGTTGAAGATTCTGTTGT 59.117 36.000 0.00 0.00 0.00 3.32
133 134 6.259608 AGACTCTGTTGTTGAAGATTCTGTTG 59.740 38.462 0.00 0.00 32.86 3.33
134 135 6.352516 AGACTCTGTTGTTGAAGATTCTGTT 58.647 36.000 0.00 0.00 32.86 3.16
135 136 5.923204 AGACTCTGTTGTTGAAGATTCTGT 58.077 37.500 0.00 0.00 32.86 3.41
136 137 5.987953 TGAGACTCTGTTGTTGAAGATTCTG 59.012 40.000 3.68 0.00 33.88 3.02
137 138 6.166984 TGAGACTCTGTTGTTGAAGATTCT 57.833 37.500 3.68 0.00 35.74 2.40
138 139 5.107143 GCTGAGACTCTGTTGTTGAAGATTC 60.107 44.000 10.64 0.00 0.00 2.52
139 140 4.754114 GCTGAGACTCTGTTGTTGAAGATT 59.246 41.667 10.64 0.00 0.00 2.40
140 141 4.314121 GCTGAGACTCTGTTGTTGAAGAT 58.686 43.478 10.64 0.00 0.00 2.40
141 142 3.722147 GCTGAGACTCTGTTGTTGAAGA 58.278 45.455 10.64 0.00 0.00 2.87
142 143 2.474359 CGCTGAGACTCTGTTGTTGAAG 59.526 50.000 10.64 0.00 0.00 3.02
143 144 2.473816 CGCTGAGACTCTGTTGTTGAA 58.526 47.619 10.64 0.00 0.00 2.69
144 145 1.269778 CCGCTGAGACTCTGTTGTTGA 60.270 52.381 10.64 0.00 0.00 3.18
145 146 1.143305 CCGCTGAGACTCTGTTGTTG 58.857 55.000 10.64 0.00 0.00 3.33
146 147 0.753262 ACCGCTGAGACTCTGTTGTT 59.247 50.000 10.64 0.00 0.00 2.83
147 148 0.032678 CACCGCTGAGACTCTGTTGT 59.967 55.000 10.64 5.84 0.00 3.32
148 149 0.668706 CCACCGCTGAGACTCTGTTG 60.669 60.000 10.64 6.14 0.00 3.33
149 150 0.827925 TCCACCGCTGAGACTCTGTT 60.828 55.000 10.64 0.00 0.00 3.16
150 151 0.827925 TTCCACCGCTGAGACTCTGT 60.828 55.000 10.64 0.00 0.00 3.41
151 152 0.318441 TTTCCACCGCTGAGACTCTG 59.682 55.000 3.68 4.41 0.00 3.35
152 153 0.318762 GTTTCCACCGCTGAGACTCT 59.681 55.000 3.68 0.00 0.00 3.24
153 154 0.318762 AGTTTCCACCGCTGAGACTC 59.681 55.000 0.00 0.00 0.00 3.36
154 155 1.272769 GTAGTTTCCACCGCTGAGACT 59.727 52.381 0.00 0.00 32.56 3.24
155 156 1.000506 TGTAGTTTCCACCGCTGAGAC 59.999 52.381 0.00 0.00 0.00 3.36
156 157 1.334160 TGTAGTTTCCACCGCTGAGA 58.666 50.000 0.00 0.00 0.00 3.27
157 158 2.386661 ATGTAGTTTCCACCGCTGAG 57.613 50.000 0.00 0.00 0.00 3.35
158 159 2.851263 AATGTAGTTTCCACCGCTGA 57.149 45.000 0.00 0.00 0.00 4.26
159 160 4.142687 CCTTTAATGTAGTTTCCACCGCTG 60.143 45.833 0.00 0.00 0.00 5.18
160 161 4.007659 CCTTTAATGTAGTTTCCACCGCT 58.992 43.478 0.00 0.00 0.00 5.52
161 162 4.004982 TCCTTTAATGTAGTTTCCACCGC 58.995 43.478 0.00 0.00 0.00 5.68
162 163 5.484715 TCTCCTTTAATGTAGTTTCCACCG 58.515 41.667 0.00 0.00 0.00 4.94
163 164 7.201617 CGAATCTCCTTTAATGTAGTTTCCACC 60.202 40.741 0.00 0.00 0.00 4.61
164 165 7.548075 TCGAATCTCCTTTAATGTAGTTTCCAC 59.452 37.037 0.00 0.00 0.00 4.02
165 166 7.617225 TCGAATCTCCTTTAATGTAGTTTCCA 58.383 34.615 0.00 0.00 0.00 3.53
166 167 7.224949 CCTCGAATCTCCTTTAATGTAGTTTCC 59.775 40.741 0.00 0.00 0.00 3.13
167 168 7.980099 TCCTCGAATCTCCTTTAATGTAGTTTC 59.020 37.037 0.00 0.00 0.00 2.78
168 169 7.848128 TCCTCGAATCTCCTTTAATGTAGTTT 58.152 34.615 0.00 0.00 0.00 2.66
169 170 7.342284 TCTCCTCGAATCTCCTTTAATGTAGTT 59.658 37.037 0.00 0.00 0.00 2.24
170 171 6.834451 TCTCCTCGAATCTCCTTTAATGTAGT 59.166 38.462 0.00 0.00 0.00 2.73
171 172 7.013846 AGTCTCCTCGAATCTCCTTTAATGTAG 59.986 40.741 0.00 0.00 0.00 2.74
172 173 6.834451 AGTCTCCTCGAATCTCCTTTAATGTA 59.166 38.462 0.00 0.00 0.00 2.29
173 174 5.659079 AGTCTCCTCGAATCTCCTTTAATGT 59.341 40.000 0.00 0.00 0.00 2.71
174 175 6.155475 AGTCTCCTCGAATCTCCTTTAATG 57.845 41.667 0.00 0.00 0.00 1.90
175 176 6.407525 CCAAGTCTCCTCGAATCTCCTTTAAT 60.408 42.308 0.00 0.00 0.00 1.40
176 177 5.105310 CCAAGTCTCCTCGAATCTCCTTTAA 60.105 44.000 0.00 0.00 0.00 1.52
177 178 4.402793 CCAAGTCTCCTCGAATCTCCTTTA 59.597 45.833 0.00 0.00 0.00 1.85
178 179 3.196685 CCAAGTCTCCTCGAATCTCCTTT 59.803 47.826 0.00 0.00 0.00 3.11
179 180 2.763448 CCAAGTCTCCTCGAATCTCCTT 59.237 50.000 0.00 0.00 0.00 3.36
180 181 2.024846 TCCAAGTCTCCTCGAATCTCCT 60.025 50.000 0.00 0.00 0.00 3.69
181 182 2.379972 TCCAAGTCTCCTCGAATCTCC 58.620 52.381 0.00 0.00 0.00 3.71
182 183 5.242838 ACATATCCAAGTCTCCTCGAATCTC 59.757 44.000 0.00 0.00 0.00 2.75
183 184 5.010516 CACATATCCAAGTCTCCTCGAATCT 59.989 44.000 0.00 0.00 0.00 2.40
184 185 5.226396 CACATATCCAAGTCTCCTCGAATC 58.774 45.833 0.00 0.00 0.00 2.52
185 186 4.039730 CCACATATCCAAGTCTCCTCGAAT 59.960 45.833 0.00 0.00 0.00 3.34
186 187 3.384789 CCACATATCCAAGTCTCCTCGAA 59.615 47.826 0.00 0.00 0.00 3.71
187 188 2.959030 CCACATATCCAAGTCTCCTCGA 59.041 50.000 0.00 0.00 0.00 4.04
188 189 2.959030 TCCACATATCCAAGTCTCCTCG 59.041 50.000 0.00 0.00 0.00 4.63
189 190 4.038642 GTCTCCACATATCCAAGTCTCCTC 59.961 50.000 0.00 0.00 0.00 3.71
190 191 3.964031 GTCTCCACATATCCAAGTCTCCT 59.036 47.826 0.00 0.00 0.00 3.69
191 192 3.964031 AGTCTCCACATATCCAAGTCTCC 59.036 47.826 0.00 0.00 0.00 3.71
192 193 4.202202 CCAGTCTCCACATATCCAAGTCTC 60.202 50.000 0.00 0.00 0.00 3.36
193 194 3.708631 CCAGTCTCCACATATCCAAGTCT 59.291 47.826 0.00 0.00 0.00 3.24
194 195 3.181461 CCCAGTCTCCACATATCCAAGTC 60.181 52.174 0.00 0.00 0.00 3.01
195 196 2.774234 CCCAGTCTCCACATATCCAAGT 59.226 50.000 0.00 0.00 0.00 3.16
196 197 2.105477 CCCCAGTCTCCACATATCCAAG 59.895 54.545 0.00 0.00 0.00 3.61
197 198 2.126882 CCCCAGTCTCCACATATCCAA 58.873 52.381 0.00 0.00 0.00 3.53
198 199 1.695664 CCCCCAGTCTCCACATATCCA 60.696 57.143 0.00 0.00 0.00 3.41
199 200 1.059913 CCCCCAGTCTCCACATATCC 58.940 60.000 0.00 0.00 0.00 2.59
215 216 3.782443 CTGGTAGGTCGCACCCCC 61.782 72.222 2.18 3.96 39.75 5.40
216 217 2.590114 AACTGGTAGGTCGCACCCC 61.590 63.158 2.18 0.00 39.75 4.95
217 218 1.375523 CAACTGGTAGGTCGCACCC 60.376 63.158 2.18 0.00 39.75 4.61
218 219 0.669625 GACAACTGGTAGGTCGCACC 60.670 60.000 0.00 0.00 38.99 5.01
219 220 1.007336 CGACAACTGGTAGGTCGCAC 61.007 60.000 12.36 0.00 46.25 5.34
220 221 1.287815 CGACAACTGGTAGGTCGCA 59.712 57.895 12.36 0.00 46.25 5.10
221 222 4.164252 CGACAACTGGTAGGTCGC 57.836 61.111 12.36 0.00 46.25 5.19
223 224 1.079336 GGGCGACAACTGGTAGGTC 60.079 63.158 0.00 0.00 0.00 3.85
224 225 1.125711 AAGGGCGACAACTGGTAGGT 61.126 55.000 0.00 0.00 0.00 3.08
225 226 0.391263 GAAGGGCGACAACTGGTAGG 60.391 60.000 0.00 0.00 0.00 3.18
226 227 0.736325 CGAAGGGCGACAACTGGTAG 60.736 60.000 0.00 0.00 44.57 3.18
227 228 1.290955 CGAAGGGCGACAACTGGTA 59.709 57.895 0.00 0.00 44.57 3.25
228 229 2.030562 CGAAGGGCGACAACTGGT 59.969 61.111 0.00 0.00 44.57 4.00
246 247 4.779733 TCTCTCGGCCTGGGTCCC 62.780 72.222 0.00 0.00 0.00 4.46
247 248 1.627297 AAATCTCTCGGCCTGGGTCC 61.627 60.000 0.00 0.00 0.00 4.46
248 249 0.179070 GAAATCTCTCGGCCTGGGTC 60.179 60.000 0.00 0.00 0.00 4.46
249 250 1.908483 GAAATCTCTCGGCCTGGGT 59.092 57.895 0.00 0.00 0.00 4.51
250 251 1.227380 CGAAATCTCTCGGCCTGGG 60.227 63.158 0.00 0.00 35.14 4.45
251 252 1.884926 GCGAAATCTCTCGGCCTGG 60.885 63.158 0.00 0.00 39.27 4.45
252 253 3.711348 GCGAAATCTCTCGGCCTG 58.289 61.111 0.00 0.00 39.27 4.85
256 257 1.878522 CACGGGCGAAATCTCTCGG 60.879 63.158 0.00 0.00 39.27 4.63
257 258 1.878522 CCACGGGCGAAATCTCTCG 60.879 63.158 0.00 0.00 41.84 4.04
258 259 1.521681 CCCACGGGCGAAATCTCTC 60.522 63.158 0.00 0.00 0.00 3.20
259 260 1.838073 AACCCACGGGCGAAATCTCT 61.838 55.000 0.69 0.00 39.32 3.10
260 261 0.958876 AAACCCACGGGCGAAATCTC 60.959 55.000 0.69 0.00 39.32 2.75
261 262 0.538746 AAAACCCACGGGCGAAATCT 60.539 50.000 0.69 0.00 39.32 2.40
262 263 0.315886 AAAAACCCACGGGCGAAATC 59.684 50.000 0.69 0.00 39.32 2.17
263 264 0.315886 GAAAAACCCACGGGCGAAAT 59.684 50.000 0.69 0.00 39.32 2.17
264 265 0.752376 AGAAAAACCCACGGGCGAAA 60.752 50.000 0.69 0.00 39.32 3.46
265 266 1.152922 AGAAAAACCCACGGGCGAA 60.153 52.632 0.69 0.00 39.32 4.70
266 267 1.598685 GAGAAAAACCCACGGGCGA 60.599 57.895 0.69 0.00 39.32 5.54
267 268 2.622962 GGAGAAAAACCCACGGGCG 61.623 63.158 0.69 0.00 39.32 6.13
268 269 2.273179 GGGAGAAAAACCCACGGGC 61.273 63.158 0.69 0.00 46.05 6.13
269 270 4.090723 GGGAGAAAAACCCACGGG 57.909 61.111 0.00 0.00 46.05 5.28
275 276 5.130477 AGAAAAAGGAAAGGGGAGAAAAACC 59.870 40.000 0.00 0.00 0.00 3.27
276 277 6.235231 AGAAAAAGGAAAGGGGAGAAAAAC 57.765 37.500 0.00 0.00 0.00 2.43
277 278 6.884472 AAGAAAAAGGAAAGGGGAGAAAAA 57.116 33.333 0.00 0.00 0.00 1.94
278 279 6.884472 AAAGAAAAAGGAAAGGGGAGAAAA 57.116 33.333 0.00 0.00 0.00 2.29
279 280 6.126883 GGAAAAGAAAAAGGAAAGGGGAGAAA 60.127 38.462 0.00 0.00 0.00 2.52
280 281 5.365605 GGAAAAGAAAAAGGAAAGGGGAGAA 59.634 40.000 0.00 0.00 0.00 2.87
281 282 4.899457 GGAAAAGAAAAAGGAAAGGGGAGA 59.101 41.667 0.00 0.00 0.00 3.71
282 283 4.901849 AGGAAAAGAAAAAGGAAAGGGGAG 59.098 41.667 0.00 0.00 0.00 4.30
283 284 4.890988 AGGAAAAGAAAAAGGAAAGGGGA 58.109 39.130 0.00 0.00 0.00 4.81
284 285 5.630415 AAGGAAAAGAAAAAGGAAAGGGG 57.370 39.130 0.00 0.00 0.00 4.79
285 286 7.792032 ACTAAAGGAAAAGAAAAAGGAAAGGG 58.208 34.615 0.00 0.00 0.00 3.95
286 287 9.667107 AAACTAAAGGAAAAGAAAAAGGAAAGG 57.333 29.630 0.00 0.00 0.00 3.11
288 289 9.661563 GGAAACTAAAGGAAAAGAAAAAGGAAA 57.338 29.630 0.00 0.00 0.00 3.13
289 290 9.042450 AGGAAACTAAAGGAAAAGAAAAAGGAA 57.958 29.630 0.00 0.00 40.61 3.36
290 291 8.603898 AGGAAACTAAAGGAAAAGAAAAAGGA 57.396 30.769 0.00 0.00 40.61 3.36
291 292 8.696374 AGAGGAAACTAAAGGAAAAGAAAAAGG 58.304 33.333 0.00 0.00 44.43 3.11
300 301 9.877222 AGGAAAATAAGAGGAAACTAAAGGAAA 57.123 29.630 0.00 0.00 44.43 3.13
301 302 9.516546 GAGGAAAATAAGAGGAAACTAAAGGAA 57.483 33.333 0.00 0.00 44.43 3.36
302 303 8.665906 TGAGGAAAATAAGAGGAAACTAAAGGA 58.334 33.333 0.00 0.00 44.43 3.36
303 304 8.863872 TGAGGAAAATAAGAGGAAACTAAAGG 57.136 34.615 0.00 0.00 44.43 3.11
310 311 9.408648 GGTCATAATGAGGAAAATAAGAGGAAA 57.591 33.333 0.00 0.00 0.00 3.13
311 312 7.715249 CGGTCATAATGAGGAAAATAAGAGGAA 59.285 37.037 0.00 0.00 0.00 3.36
312 313 7.070696 TCGGTCATAATGAGGAAAATAAGAGGA 59.929 37.037 0.00 0.00 0.00 3.71
313 314 7.217200 TCGGTCATAATGAGGAAAATAAGAGG 58.783 38.462 0.00 0.00 0.00 3.69
314 315 8.839310 ATCGGTCATAATGAGGAAAATAAGAG 57.161 34.615 0.00 0.00 0.00 2.85
315 316 9.627123 AAATCGGTCATAATGAGGAAAATAAGA 57.373 29.630 0.00 0.00 0.00 2.10
318 319 8.629158 CCAAAATCGGTCATAATGAGGAAAATA 58.371 33.333 0.00 0.00 0.00 1.40
319 320 7.124147 ACCAAAATCGGTCATAATGAGGAAAAT 59.876 33.333 0.00 0.00 32.11 1.82
320 321 6.435904 ACCAAAATCGGTCATAATGAGGAAAA 59.564 34.615 0.00 0.00 32.11 2.29
321 322 5.949354 ACCAAAATCGGTCATAATGAGGAAA 59.051 36.000 0.00 0.00 32.11 3.13
322 323 5.505780 ACCAAAATCGGTCATAATGAGGAA 58.494 37.500 0.00 0.00 32.11 3.36
323 324 5.110814 ACCAAAATCGGTCATAATGAGGA 57.889 39.130 0.00 0.00 32.11 3.71
334 335 2.264813 CGTACATCGACCAAAATCGGT 58.735 47.619 0.00 0.00 43.91 4.69
335 336 2.264813 ACGTACATCGACCAAAATCGG 58.735 47.619 0.00 0.00 42.50 4.18
336 337 5.420366 CAATACGTACATCGACCAAAATCG 58.580 41.667 0.00 0.00 43.63 3.34
337 338 5.006358 AGCAATACGTACATCGACCAAAATC 59.994 40.000 0.00 0.00 42.86 2.17
338 339 4.873827 AGCAATACGTACATCGACCAAAAT 59.126 37.500 0.00 0.00 42.86 1.82
339 340 4.247258 AGCAATACGTACATCGACCAAAA 58.753 39.130 0.00 0.00 42.86 2.44
340 341 3.852286 AGCAATACGTACATCGACCAAA 58.148 40.909 0.00 0.00 42.86 3.28
341 342 3.441163 GAGCAATACGTACATCGACCAA 58.559 45.455 0.00 0.00 42.86 3.67
342 343 2.223641 GGAGCAATACGTACATCGACCA 60.224 50.000 0.00 0.00 42.86 4.02
343 344 2.391879 GGAGCAATACGTACATCGACC 58.608 52.381 0.00 0.00 42.86 4.79
344 345 2.034305 AGGGAGCAATACGTACATCGAC 59.966 50.000 0.00 0.00 42.86 4.20
345 346 2.304092 AGGGAGCAATACGTACATCGA 58.696 47.619 0.00 0.00 42.86 3.59
346 347 2.795175 AGGGAGCAATACGTACATCG 57.205 50.000 0.00 0.00 46.00 3.84
347 348 3.069729 AGGAAGGGAGCAATACGTACATC 59.930 47.826 0.00 0.00 0.00 3.06
348 349 3.039011 AGGAAGGGAGCAATACGTACAT 58.961 45.455 0.00 0.00 0.00 2.29
349 350 2.463752 AGGAAGGGAGCAATACGTACA 58.536 47.619 0.00 0.00 0.00 2.90
350 351 4.280174 TGATAGGAAGGGAGCAATACGTAC 59.720 45.833 0.00 0.00 0.00 3.67
351 352 4.476297 TGATAGGAAGGGAGCAATACGTA 58.524 43.478 0.00 0.00 0.00 3.57
352 353 3.305720 TGATAGGAAGGGAGCAATACGT 58.694 45.455 0.00 0.00 0.00 3.57
353 354 4.543590 ATGATAGGAAGGGAGCAATACG 57.456 45.455 0.00 0.00 0.00 3.06
354 355 7.624549 TCATTATGATAGGAAGGGAGCAATAC 58.375 38.462 0.00 0.00 0.00 1.89
355 356 7.813087 TCATTATGATAGGAAGGGAGCAATA 57.187 36.000 0.00 0.00 0.00 1.90
356 357 6.708885 TCATTATGATAGGAAGGGAGCAAT 57.291 37.500 0.00 0.00 0.00 3.56
357 358 6.514012 TTCATTATGATAGGAAGGGAGCAA 57.486 37.500 0.00 0.00 0.00 3.91
358 359 6.514012 TTTCATTATGATAGGAAGGGAGCA 57.486 37.500 0.00 0.00 0.00 4.26
359 360 7.522889 GCTTTTTCATTATGATAGGAAGGGAGC 60.523 40.741 0.00 0.00 0.00 4.70
360 361 7.040132 GGCTTTTTCATTATGATAGGAAGGGAG 60.040 40.741 0.00 0.00 0.00 4.30
361 362 6.777580 GGCTTTTTCATTATGATAGGAAGGGA 59.222 38.462 0.00 0.00 0.00 4.20
362 363 6.015095 GGGCTTTTTCATTATGATAGGAAGGG 60.015 42.308 0.00 0.00 0.00 3.95
363 364 6.550854 TGGGCTTTTTCATTATGATAGGAAGG 59.449 38.462 0.00 0.00 0.00 3.46
364 365 7.255730 CCTGGGCTTTTTCATTATGATAGGAAG 60.256 40.741 0.00 0.31 0.00 3.46
365 366 6.550854 CCTGGGCTTTTTCATTATGATAGGAA 59.449 38.462 0.00 0.00 0.00 3.36
366 367 6.070656 CCTGGGCTTTTTCATTATGATAGGA 58.929 40.000 0.00 0.00 0.00 2.94
367 368 5.835280 ACCTGGGCTTTTTCATTATGATAGG 59.165 40.000 0.00 0.00 0.00 2.57
368 369 6.966534 ACCTGGGCTTTTTCATTATGATAG 57.033 37.500 0.00 0.00 0.00 2.08
369 370 7.555087 CAAACCTGGGCTTTTTCATTATGATA 58.445 34.615 0.00 0.00 0.00 2.15
370 371 6.408869 CAAACCTGGGCTTTTTCATTATGAT 58.591 36.000 0.00 0.00 0.00 2.45
371 372 5.792741 CAAACCTGGGCTTTTTCATTATGA 58.207 37.500 0.00 0.00 0.00 2.15
372 373 4.392754 GCAAACCTGGGCTTTTTCATTATG 59.607 41.667 0.00 0.00 0.00 1.90
373 374 4.286808 AGCAAACCTGGGCTTTTTCATTAT 59.713 37.500 0.00 0.00 36.92 1.28
374 375 3.645687 AGCAAACCTGGGCTTTTTCATTA 59.354 39.130 0.00 0.00 36.92 1.90
375 376 2.439135 AGCAAACCTGGGCTTTTTCATT 59.561 40.909 0.00 0.00 36.92 2.57
376 377 2.049372 AGCAAACCTGGGCTTTTTCAT 58.951 42.857 0.00 0.00 36.92 2.57
377 378 1.138661 CAGCAAACCTGGGCTTTTTCA 59.861 47.619 0.00 0.00 38.56 2.69
378 379 1.869774 CAGCAAACCTGGGCTTTTTC 58.130 50.000 0.00 0.00 38.56 2.29
387 388 1.882623 GAAGGAAGACCAGCAAACCTG 59.117 52.381 0.00 0.00 41.41 4.00
388 389 1.494721 TGAAGGAAGACCAGCAAACCT 59.505 47.619 0.00 0.00 38.94 3.50
389 390 1.981256 TGAAGGAAGACCAGCAAACC 58.019 50.000 0.00 0.00 38.94 3.27
390 391 4.385358 TTTTGAAGGAAGACCAGCAAAC 57.615 40.909 0.00 0.00 39.37 2.93
428 429 5.938438 AGTTGCTTTGCTCAAAACAAAAA 57.062 30.435 11.34 0.00 37.88 1.94
429 430 6.257630 GGATAGTTGCTTTGCTCAAAACAAAA 59.742 34.615 11.34 5.46 37.88 2.44
430 431 5.752955 GGATAGTTGCTTTGCTCAAAACAAA 59.247 36.000 11.34 0.77 37.88 2.83
431 432 5.163468 TGGATAGTTGCTTTGCTCAAAACAA 60.163 36.000 6.98 6.98 34.98 2.83
432 433 4.340666 TGGATAGTTGCTTTGCTCAAAACA 59.659 37.500 0.00 0.00 0.00 2.83
433 434 4.870363 TGGATAGTTGCTTTGCTCAAAAC 58.130 39.130 0.00 0.00 0.00 2.43
434 435 5.726980 ATGGATAGTTGCTTTGCTCAAAA 57.273 34.783 0.00 0.00 0.00 2.44
435 436 5.163622 GCTATGGATAGTTGCTTTGCTCAAA 60.164 40.000 0.00 0.00 32.96 2.69
436 437 4.336433 GCTATGGATAGTTGCTTTGCTCAA 59.664 41.667 0.00 0.00 32.96 3.02
437 438 3.879295 GCTATGGATAGTTGCTTTGCTCA 59.121 43.478 0.00 0.00 32.96 4.26
438 439 4.133078 AGCTATGGATAGTTGCTTTGCTC 58.867 43.478 0.00 0.00 32.96 4.26
439 440 4.162040 AGCTATGGATAGTTGCTTTGCT 57.838 40.909 0.00 0.00 32.96 3.91
440 441 4.907879 AAGCTATGGATAGTTGCTTTGC 57.092 40.909 0.00 0.00 40.51 3.68
441 442 5.762218 AGCTAAGCTATGGATAGTTGCTTTG 59.238 40.000 3.89 3.86 42.81 2.77
442 443 5.762218 CAGCTAAGCTATGGATAGTTGCTTT 59.238 40.000 3.89 0.00 42.81 3.51
443 444 5.303971 CAGCTAAGCTATGGATAGTTGCTT 58.696 41.667 0.00 0.00 44.65 3.91
444 445 4.262808 CCAGCTAAGCTATGGATAGTTGCT 60.263 45.833 1.89 0.00 36.40 3.91
445 446 3.999663 CCAGCTAAGCTATGGATAGTTGC 59.000 47.826 1.89 0.00 36.40 4.17
446 447 5.474578 TCCAGCTAAGCTATGGATAGTTG 57.525 43.478 5.93 3.26 36.40 3.16
447 448 5.782331 TCATCCAGCTAAGCTATGGATAGTT 59.218 40.000 17.50 0.00 38.74 2.24
448 449 5.186797 GTCATCCAGCTAAGCTATGGATAGT 59.813 44.000 17.50 0.96 38.74 2.12
449 450 5.421693 AGTCATCCAGCTAAGCTATGGATAG 59.578 44.000 17.50 13.40 38.74 2.08
450 451 5.336945 AGTCATCCAGCTAAGCTATGGATA 58.663 41.667 17.50 8.01 38.74 2.59
451 452 4.166539 AGTCATCCAGCTAAGCTATGGAT 58.833 43.478 13.95 13.95 40.55 3.41
452 453 3.581101 AGTCATCCAGCTAAGCTATGGA 58.419 45.455 11.08 11.08 36.40 3.41
453 454 4.063689 CAAGTCATCCAGCTAAGCTATGG 58.936 47.826 0.00 0.00 36.40 2.74
454 455 4.749099 GTCAAGTCATCCAGCTAAGCTATG 59.251 45.833 0.00 0.00 36.40 2.23
455 456 4.653341 AGTCAAGTCATCCAGCTAAGCTAT 59.347 41.667 0.00 0.00 36.40 2.97
456 457 4.026744 AGTCAAGTCATCCAGCTAAGCTA 58.973 43.478 0.00 0.00 36.40 3.32
457 458 2.836981 AGTCAAGTCATCCAGCTAAGCT 59.163 45.455 0.00 0.00 40.77 3.74
458 459 3.194062 GAGTCAAGTCATCCAGCTAAGC 58.806 50.000 0.00 0.00 0.00 3.09
459 460 3.443037 CGAGTCAAGTCATCCAGCTAAG 58.557 50.000 0.00 0.00 0.00 2.18
460 461 2.417379 GCGAGTCAAGTCATCCAGCTAA 60.417 50.000 0.00 0.00 0.00 3.09
461 462 1.135139 GCGAGTCAAGTCATCCAGCTA 59.865 52.381 0.00 0.00 0.00 3.32
462 463 0.108424 GCGAGTCAAGTCATCCAGCT 60.108 55.000 0.00 0.00 0.00 4.24
473 474 1.078918 CTGGCCTGATGCGAGTCAA 60.079 57.895 3.32 0.00 40.60 3.18
474 475 2.580815 CTGGCCTGATGCGAGTCA 59.419 61.111 3.32 0.00 40.60 3.41
665 683 2.185867 CCTGTGCATGGCATTGGC 59.814 61.111 0.00 2.73 41.91 4.52
666 684 1.514087 GTCCTGTGCATGGCATTGG 59.486 57.895 0.00 0.39 41.91 3.16
667 685 1.514087 GGTCCTGTGCATGGCATTG 59.486 57.895 0.00 0.00 41.91 2.82
668 686 2.048023 CGGTCCTGTGCATGGCATT 61.048 57.895 0.00 0.00 41.91 3.56
669 687 2.438975 CGGTCCTGTGCATGGCAT 60.439 61.111 0.00 0.00 41.91 4.40
715 733 0.546122 ATTATCAAGGTCGCCTGGCA 59.454 50.000 20.29 2.90 32.13 4.92
719 764 2.550978 CGTGAATTATCAAGGTCGCCT 58.449 47.619 0.00 0.00 37.30 5.52
817 880 3.964875 GTGGTGGTGGCGTTGCTG 61.965 66.667 0.00 0.00 0.00 4.41
818 881 4.189580 AGTGGTGGTGGCGTTGCT 62.190 61.111 0.00 0.00 0.00 3.91
819 882 3.660111 GAGTGGTGGTGGCGTTGC 61.660 66.667 0.00 0.00 0.00 4.17
820 883 2.978010 GGAGTGGTGGTGGCGTTG 60.978 66.667 0.00 0.00 0.00 4.10
821 884 4.265056 GGGAGTGGTGGTGGCGTT 62.265 66.667 0.00 0.00 0.00 4.84
923 990 1.474143 GGGGAAGAAGAGGATGCGAAG 60.474 57.143 0.00 0.00 0.00 3.79
928 995 0.105778 GAGCGGGGAAGAAGAGGATG 59.894 60.000 0.00 0.00 0.00 3.51
985 1052 3.803082 CATGCCAGGGAACGCGTG 61.803 66.667 14.98 0.00 35.81 5.34
990 1057 1.225704 CCTCTCCATGCCAGGGAAC 59.774 63.158 0.00 0.00 33.11 3.62
1341 1411 0.965866 TGTAGCTGGAGGTGGAGTCG 60.966 60.000 0.00 0.00 0.00 4.18
1365 1435 3.760035 GAGGCGGACGAGCAGGAA 61.760 66.667 0.00 0.00 39.27 3.36
1383 1453 1.006102 GGACTCAGTGTCGGTGGTG 60.006 63.158 0.00 0.00 46.24 4.17
1434 1504 3.672295 GAACTCCTCCAGCTGGCGG 62.672 68.421 32.40 32.40 41.41 6.13
1707 1777 2.738521 GACACGCACGATGGCTGT 60.739 61.111 0.00 0.00 0.00 4.40
1809 1879 4.154347 CTCCGCACCAGCTCCTCC 62.154 72.222 0.00 0.00 39.10 4.30
1971 2041 1.463444 CGAAAGGGCTAGAAAACCGTG 59.537 52.381 0.00 0.00 0.00 4.94
2024 2096 6.942976 ACATTTTAGTTATCAGGTCCTTCGA 58.057 36.000 0.00 0.00 0.00 3.71
2025 2097 7.549488 AGAACATTTTAGTTATCAGGTCCTTCG 59.451 37.037 0.00 0.00 0.00 3.79
2063 2135 6.255453 TGCAAGCAACAAGAACATTTTAGTTC 59.745 34.615 0.00 0.00 46.35 3.01
2076 2148 5.766222 ACTAGAAGAAATGCAAGCAACAAG 58.234 37.500 0.00 0.00 0.00 3.16
2132 2204 5.667539 TGGACAACCAAACTTTGAATTCA 57.332 34.783 3.38 3.38 43.91 2.57
2168 2240 5.291858 TCACATATTGAATCTGCGTGAGAAC 59.708 40.000 0.00 0.00 33.12 3.01
2228 2308 5.163468 TGTGAACTGGTACGTAAAGGTTACA 60.163 40.000 14.55 14.55 0.00 2.41
2233 2313 3.682858 CCATGTGAACTGGTACGTAAAGG 59.317 47.826 0.00 0.00 0.00 3.11
2234 2314 4.387862 GTCCATGTGAACTGGTACGTAAAG 59.612 45.833 0.00 0.45 35.19 1.85
2259 2339 4.312443 CTCCGTTGGTTTTAGCTAACTGA 58.688 43.478 5.45 0.00 0.00 3.41
2319 3378 9.865321 ATGCTAATCTAAAGTAAAACTCGTACA 57.135 29.630 0.00 0.00 0.00 2.90
2361 3424 9.832445 ATACGTACCAACATTGATATTTTCTCT 57.168 29.630 0.00 0.00 0.00 3.10
2381 3444 7.756722 GGAACACTTGCTCTAAACTTATACGTA 59.243 37.037 0.00 0.00 0.00 3.57
2382 3445 6.589139 GGAACACTTGCTCTAAACTTATACGT 59.411 38.462 0.00 0.00 0.00 3.57
2383 3446 6.812160 AGGAACACTTGCTCTAAACTTATACG 59.188 38.462 0.00 0.00 0.00 3.06
2384 3447 8.549338 AAGGAACACTTGCTCTAAACTTATAC 57.451 34.615 0.00 0.00 38.21 1.47
2446 3509 5.473846 TGAAACCATGTTTACTAAATCCGCA 59.526 36.000 0.00 0.00 0.00 5.69
2461 3524 6.453926 TCATAATGGACACATGAAACCATG 57.546 37.500 17.49 4.07 45.21 3.66
2462 3525 7.664552 ATTCATAATGGACACATGAAACCAT 57.335 32.000 0.00 8.02 40.86 3.55
2523 5259 6.417044 CGGGTCGACTATGTATGTTAAAAGAG 59.583 42.308 16.46 0.00 0.00 2.85
2524 5260 6.127647 ACGGGTCGACTATGTATGTTAAAAGA 60.128 38.462 16.46 0.00 0.00 2.52
2545 5281 0.659427 TTCACGCTCGAGTATACGGG 59.341 55.000 15.13 10.20 36.78 5.28
2547 5283 4.497966 TGAAATTTCACGCTCGAGTATACG 59.502 41.667 16.91 11.35 31.01 3.06
2583 5321 9.389755 GTTATTTTTGCCCAAAATACCACATAT 57.610 29.630 6.98 0.00 43.93 1.78
2584 5322 8.375506 TGTTATTTTTGCCCAAAATACCACATA 58.624 29.630 6.98 0.00 43.93 2.29
2638 5377 6.225318 ACAATTTGGGTTCTCATTGTTCATG 58.775 36.000 0.78 0.00 36.64 3.07
2646 5385 8.869109 TGAAGAAAATACAATTTGGGTTCTCAT 58.131 29.630 0.78 0.00 0.00 2.90
2648 5387 8.360390 AGTGAAGAAAATACAATTTGGGTTCTC 58.640 33.333 0.78 0.00 0.00 2.87
2677 5493 5.046878 TGAAGTATTGACCACCGTGATACTT 60.047 40.000 17.14 17.14 0.00 2.24
2808 5624 3.503748 CCTTGGACTCATCTTGTGTTTCC 59.496 47.826 0.00 0.00 33.21 3.13
2897 5715 1.074889 TCCTACAAACCAAAGGAGGCC 59.925 52.381 0.00 0.00 34.46 5.19
2898 5716 2.579410 TCCTACAAACCAAAGGAGGC 57.421 50.000 0.00 0.00 34.46 4.70
2899 5717 4.923415 AGATTCCTACAAACCAAAGGAGG 58.077 43.478 0.00 0.00 40.43 4.30
2900 5718 5.770162 ACAAGATTCCTACAAACCAAAGGAG 59.230 40.000 0.00 0.00 40.43 3.69
2901 5719 5.701224 ACAAGATTCCTACAAACCAAAGGA 58.299 37.500 0.00 0.00 37.64 3.36
2902 5720 7.447238 TCTTACAAGATTCCTACAAACCAAAGG 59.553 37.037 0.00 0.00 0.00 3.11
2903 5721 8.391075 TCTTACAAGATTCCTACAAACCAAAG 57.609 34.615 0.00 0.00 0.00 2.77
2904 5722 8.754991 TTCTTACAAGATTCCTACAAACCAAA 57.245 30.769 0.00 0.00 34.49 3.28
2905 5723 8.934023 ATTCTTACAAGATTCCTACAAACCAA 57.066 30.769 0.00 0.00 34.49 3.67
2906 5724 8.934023 AATTCTTACAAGATTCCTACAAACCA 57.066 30.769 0.00 0.00 34.49 3.67
2907 5725 9.841880 GAAATTCTTACAAGATTCCTACAAACC 57.158 33.333 0.00 0.00 34.49 3.27
2955 5773 6.503041 ACTAAAGGGCTCCATAGGAATTTTT 58.497 36.000 0.00 0.00 0.00 1.94
2956 5774 6.092346 ACTAAAGGGCTCCATAGGAATTTT 57.908 37.500 0.00 0.00 0.00 1.82
2957 5775 5.734031 ACTAAAGGGCTCCATAGGAATTT 57.266 39.130 0.00 0.00 0.00 1.82
2958 5776 5.734031 AACTAAAGGGCTCCATAGGAATT 57.266 39.130 0.00 0.00 0.00 2.17
2959 5777 5.734031 AAACTAAAGGGCTCCATAGGAAT 57.266 39.130 0.00 0.00 0.00 3.01
2960 5778 6.841781 ATAAACTAAAGGGCTCCATAGGAA 57.158 37.500 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.