Multiple sequence alignment - TraesCS5A01G204500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G204500 chr5A 100.000 2878 0 0 1 2878 414097724 414094847 0.000000e+00 5315.0
1 TraesCS5A01G204500 chr5A 89.354 263 24 4 1801 2059 476018563 476018825 7.690000e-86 327.0
2 TraesCS5A01G204500 chr5A 84.653 202 21 5 3 196 632173176 632172977 2.930000e-45 193.0
3 TraesCS5A01G204500 chr1A 97.538 528 8 4 434 957 309789093 309788567 0.000000e+00 898.0
4 TraesCS5A01G204500 chr1A 90.769 260 21 3 1802 2059 522463383 522463125 7.630000e-91 344.0
5 TraesCS5A01G204500 chr6B 89.524 525 48 5 434 953 423012616 423013138 0.000000e+00 658.0
6 TraesCS5A01G204500 chr6B 91.903 247 18 2 1814 2059 4952997 4953242 7.630000e-91 344.0
7 TraesCS5A01G204500 chr6B 91.903 247 18 2 1814 2059 4975379 4975624 7.630000e-91 344.0
8 TraesCS5A01G204500 chr6B 91.093 247 20 2 1814 2059 5032774 5033019 1.650000e-87 333.0
9 TraesCS5A01G204500 chr2B 88.381 525 53 6 434 952 531995476 531994954 2.430000e-175 625.0
10 TraesCS5A01G204500 chr2B 83.495 515 73 11 443 953 174368212 174367706 1.210000e-128 470.0
11 TraesCS5A01G204500 chr5D 83.739 658 44 21 2231 2876 320370705 320371311 5.380000e-157 564.0
12 TraesCS5A01G204500 chr5D 88.976 381 25 9 952 1320 320368815 320369190 3.380000e-124 455.0
13 TraesCS5A01G204500 chr5D 86.223 421 27 11 1364 1768 320369292 320369697 7.370000e-116 427.0
14 TraesCS5A01G204500 chr5D 90.417 240 23 0 193 432 320368586 320368825 1.660000e-82 316.0
15 TraesCS5A01G204500 chr5D 79.739 153 23 7 2069 2218 514151701 514151554 1.410000e-18 104.0
16 TraesCS5A01G204500 chr5D 97.727 44 1 0 1324 1367 320369227 320369270 3.080000e-10 76.8
17 TraesCS5A01G204500 chr3B 86.992 492 57 7 465 952 696667867 696667379 5.420000e-152 547.0
18 TraesCS5A01G204500 chr3B 84.069 521 77 6 434 951 737658859 737659376 5.540000e-137 497.0
19 TraesCS5A01G204500 chr3B 82.432 148 24 2 2057 2204 449977660 449977515 8.370000e-26 128.0
20 TraesCS5A01G204500 chr3B 90.909 44 2 1 152 193 21193348 21193305 1.110000e-04 58.4
21 TraesCS5A01G204500 chr7B 84.130 523 76 7 434 952 112637694 112637175 1.540000e-137 499.0
22 TraesCS5A01G204500 chr7B 83.694 509 68 12 449 952 329927640 329927142 1.560000e-127 466.0
23 TraesCS5A01G204500 chr7B 95.238 42 2 0 152 193 44617257 44617298 1.850000e-07 67.6
24 TraesCS5A01G204500 chr5B 83.206 524 81 7 434 953 648175450 648175970 9.330000e-130 473.0
25 TraesCS5A01G204500 chr5B 83.885 453 37 17 2231 2674 371291659 371292084 1.610000e-107 399.0
26 TraesCS5A01G204500 chr5B 82.723 382 27 18 952 1319 371269906 371270262 1.300000e-78 303.0
27 TraesCS5A01G204500 chr5B 88.186 237 12 4 1364 1600 371270370 371270590 4.730000e-68 268.0
28 TraesCS5A01G204500 chr5B 84.490 245 16 2 192 436 371269698 371269920 3.730000e-54 222.0
29 TraesCS5A01G204500 chr5B 84.896 192 20 4 1592 1779 371270666 371270852 4.900000e-43 185.0
30 TraesCS5A01G204500 chr5B 94.792 96 2 1 2784 2876 371305763 371305858 2.310000e-31 147.0
31 TraesCS5A01G204500 chr5B 100.000 44 0 0 1324 1367 371270305 371270348 6.610000e-12 82.4
32 TraesCS5A01G204500 chr5B 89.394 66 3 1 2733 2798 371305687 371305748 2.380000e-11 80.5
33 TraesCS5A01G204500 chr2D 89.552 268 22 4 1800 2063 37526611 37526876 4.590000e-88 335.0
34 TraesCS5A01G204500 chr2D 88.158 152 16 1 3 154 573907728 573907877 2.280000e-41 180.0
35 TraesCS5A01G204500 chr1B 89.734 263 21 3 1803 2059 12835103 12835365 5.940000e-87 331.0
36 TraesCS5A01G204500 chr7D 89.434 265 23 3 1802 2062 41057519 41057256 2.140000e-86 329.0
37 TraesCS5A01G204500 chr7D 89.362 47 3 2 152 196 18757052 18757098 1.110000e-04 58.4
38 TraesCS5A01G204500 chr6A 89.575 259 26 1 1802 2060 35955227 35955484 7.690000e-86 327.0
39 TraesCS5A01G204500 chr4A 92.208 154 12 0 1 154 235650630 235650477 4.830000e-53 219.0
40 TraesCS5A01G204500 chr4A 90.909 154 14 0 1 154 477917279 477917126 1.050000e-49 207.0
41 TraesCS5A01G204500 chr4A 82.716 162 27 1 2057 2218 90504626 90504466 2.990000e-30 143.0
42 TraesCS5A01G204500 chr2A 92.157 153 12 0 2 154 678197841 678197993 1.740000e-52 217.0
43 TraesCS5A01G204500 chr2A 82.993 147 22 3 2058 2203 612412773 612412917 2.330000e-26 130.0
44 TraesCS5A01G204500 chr7A 91.558 154 13 0 1 154 639593031 639593184 2.250000e-51 213.0
45 TraesCS5A01G204500 chr7A 90.260 154 15 0 1 154 162520403 162520556 4.860000e-48 202.0
46 TraesCS5A01G204500 chr7A 90.132 152 13 1 3 154 107597918 107598067 2.260000e-46 196.0
47 TraesCS5A01G204500 chr7A 89.542 153 13 2 3 155 282363277 282363128 1.050000e-44 191.0
48 TraesCS5A01G204500 chr7A 86.395 147 19 1 2057 2203 383096029 383096174 2.970000e-35 159.0
49 TraesCS5A01G204500 chr4B 87.075 147 18 1 2057 2203 216861097 216861242 6.380000e-37 165.0
50 TraesCS5A01G204500 chr3D 82.099 162 28 1 2057 2218 246180484 246180324 1.390000e-28 137.0
51 TraesCS5A01G204500 chr6D 82.550 149 22 4 2056 2203 99800567 99800422 8.370000e-26 128.0
52 TraesCS5A01G204500 chr6D 77.301 163 27 8 41 195 7038384 7038224 1.420000e-13 87.9
53 TraesCS5A01G204500 chr1D 80.537 149 24 5 2057 2203 456160118 456159973 3.030000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G204500 chr5A 414094847 414097724 2877 True 5315.00 5315 100.0000 1 2878 1 chr5A.!!$R1 2877
1 TraesCS5A01G204500 chr1A 309788567 309789093 526 True 898.00 898 97.5380 434 957 1 chr1A.!!$R1 523
2 TraesCS5A01G204500 chr6B 423012616 423013138 522 False 658.00 658 89.5240 434 953 1 chr6B.!!$F4 519
3 TraesCS5A01G204500 chr2B 531994954 531995476 522 True 625.00 625 88.3810 434 952 1 chr2B.!!$R2 518
4 TraesCS5A01G204500 chr2B 174367706 174368212 506 True 470.00 470 83.4950 443 953 1 chr2B.!!$R1 510
5 TraesCS5A01G204500 chr5D 320368586 320371311 2725 False 367.76 564 89.4164 193 2876 5 chr5D.!!$F1 2683
6 TraesCS5A01G204500 chr3B 737658859 737659376 517 False 497.00 497 84.0690 434 951 1 chr3B.!!$F1 517
7 TraesCS5A01G204500 chr7B 112637175 112637694 519 True 499.00 499 84.1300 434 952 1 chr7B.!!$R1 518
8 TraesCS5A01G204500 chr5B 648175450 648175970 520 False 473.00 473 83.2060 434 953 1 chr5B.!!$F2 519
9 TraesCS5A01G204500 chr5B 371269698 371270852 1154 False 212.08 303 88.0590 192 1779 5 chr5B.!!$F3 1587

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
971 978 0.175989 GGTTAGGCAGGAGAAGACGG 59.824 60.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2494 3368 0.033405 CACGGGGTAGAGGAGAGGAA 60.033 60.0 0.0 0.0 0.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.873739 TTGATGAACTATGTAGTATGCGATG 57.126 36.000 0.00 0.00 34.99 3.84
26 27 7.214467 TGATGAACTATGTAGTATGCGATGA 57.786 36.000 0.00 0.00 34.99 2.92
27 28 7.657336 TGATGAACTATGTAGTATGCGATGAA 58.343 34.615 0.00 0.00 34.99 2.57
28 29 7.595130 TGATGAACTATGTAGTATGCGATGAAC 59.405 37.037 0.00 0.00 34.99 3.18
29 30 6.801575 TGAACTATGTAGTATGCGATGAACA 58.198 36.000 0.00 0.00 34.99 3.18
30 31 7.262048 TGAACTATGTAGTATGCGATGAACAA 58.738 34.615 0.00 0.00 34.99 2.83
31 32 7.926018 TGAACTATGTAGTATGCGATGAACAAT 59.074 33.333 0.00 0.00 34.99 2.71
32 33 7.643528 ACTATGTAGTATGCGATGAACAATG 57.356 36.000 0.00 0.00 34.13 2.82
33 34 7.210174 ACTATGTAGTATGCGATGAACAATGT 58.790 34.615 0.00 0.00 34.13 2.71
34 35 8.357402 ACTATGTAGTATGCGATGAACAATGTA 58.643 33.333 0.00 0.00 34.13 2.29
35 36 7.643528 ATGTAGTATGCGATGAACAATGTAG 57.356 36.000 0.00 0.00 0.00 2.74
36 37 6.569780 TGTAGTATGCGATGAACAATGTAGT 58.430 36.000 0.00 0.00 0.00 2.73
37 38 7.708998 TGTAGTATGCGATGAACAATGTAGTA 58.291 34.615 0.00 0.00 0.00 1.82
38 39 8.357402 TGTAGTATGCGATGAACAATGTAGTAT 58.643 33.333 0.00 0.00 0.00 2.12
39 40 7.643528 AGTATGCGATGAACAATGTAGTATG 57.356 36.000 0.00 0.00 0.00 2.39
40 41 7.210174 AGTATGCGATGAACAATGTAGTATGT 58.790 34.615 0.00 0.00 0.00 2.29
41 42 5.717038 TGCGATGAACAATGTAGTATGTG 57.283 39.130 0.00 0.00 0.00 3.21
42 43 5.175127 TGCGATGAACAATGTAGTATGTGT 58.825 37.500 0.00 0.00 0.00 3.72
43 44 5.063312 TGCGATGAACAATGTAGTATGTGTG 59.937 40.000 0.00 0.00 0.00 3.82
44 45 5.290885 GCGATGAACAATGTAGTATGTGTGA 59.709 40.000 0.00 0.00 0.00 3.58
45 46 6.018751 GCGATGAACAATGTAGTATGTGTGAT 60.019 38.462 0.00 0.00 0.00 3.06
46 47 7.339953 CGATGAACAATGTAGTATGTGTGATG 58.660 38.462 0.00 0.00 0.00 3.07
47 48 7.222611 CGATGAACAATGTAGTATGTGTGATGA 59.777 37.037 0.00 0.00 0.00 2.92
48 49 8.791327 ATGAACAATGTAGTATGTGTGATGAA 57.209 30.769 0.00 0.00 0.00 2.57
49 50 8.028540 TGAACAATGTAGTATGTGTGATGAAC 57.971 34.615 0.00 0.00 0.00 3.18
50 51 7.877612 TGAACAATGTAGTATGTGTGATGAACT 59.122 33.333 0.00 0.00 0.00 3.01
51 52 7.601073 ACAATGTAGTATGTGTGATGAACTG 57.399 36.000 0.00 0.00 0.00 3.16
52 53 7.161404 ACAATGTAGTATGTGTGATGAACTGT 58.839 34.615 0.00 0.00 0.00 3.55
53 54 7.118245 ACAATGTAGTATGTGTGATGAACTGTG 59.882 37.037 0.00 0.00 0.00 3.66
54 55 6.096673 TGTAGTATGTGTGATGAACTGTGT 57.903 37.500 0.00 0.00 0.00 3.72
55 56 6.521162 TGTAGTATGTGTGATGAACTGTGTT 58.479 36.000 0.00 0.00 0.00 3.32
56 57 6.989759 TGTAGTATGTGTGATGAACTGTGTTT 59.010 34.615 0.00 0.00 0.00 2.83
57 58 6.304356 AGTATGTGTGATGAACTGTGTTTG 57.696 37.500 0.00 0.00 0.00 2.93
58 59 3.419264 TGTGTGATGAACTGTGTTTGC 57.581 42.857 0.00 0.00 0.00 3.68
59 60 2.223226 TGTGTGATGAACTGTGTTTGCG 60.223 45.455 0.00 0.00 0.00 4.85
60 61 1.268488 TGTGATGAACTGTGTTTGCGC 60.268 47.619 0.00 0.00 0.00 6.09
61 62 1.020437 TGATGAACTGTGTTTGCGCA 58.980 45.000 5.66 5.66 0.00 6.09
62 63 1.403323 TGATGAACTGTGTTTGCGCAA 59.597 42.857 21.02 21.02 34.39 4.85
63 64 1.780860 GATGAACTGTGTTTGCGCAAC 59.219 47.619 24.99 18.04 34.39 4.17
64 65 0.808125 TGAACTGTGTTTGCGCAACT 59.192 45.000 24.99 0.97 36.21 3.16
65 66 1.201181 TGAACTGTGTTTGCGCAACTT 59.799 42.857 24.99 3.47 36.21 2.66
66 67 1.846175 GAACTGTGTTTGCGCAACTTC 59.154 47.619 24.99 16.36 36.21 3.01
67 68 1.094785 ACTGTGTTTGCGCAACTTCT 58.905 45.000 24.99 0.00 36.21 2.85
68 69 1.064060 ACTGTGTTTGCGCAACTTCTC 59.936 47.619 24.99 16.36 36.21 2.87
69 70 0.380378 TGTGTTTGCGCAACTTCTCC 59.620 50.000 24.99 8.30 36.21 3.71
70 71 0.317854 GTGTTTGCGCAACTTCTCCC 60.318 55.000 24.99 5.42 36.21 4.30
71 72 1.082104 GTTTGCGCAACTTCTCCCG 60.082 57.895 24.99 0.00 31.92 5.14
72 73 1.525077 TTTGCGCAACTTCTCCCGT 60.525 52.632 24.99 0.00 0.00 5.28
73 74 1.781025 TTTGCGCAACTTCTCCCGTG 61.781 55.000 24.99 0.00 0.00 4.94
74 75 2.357034 GCGCAACTTCTCCCGTGA 60.357 61.111 0.30 0.00 0.00 4.35
75 76 1.959226 GCGCAACTTCTCCCGTGAA 60.959 57.895 0.30 0.00 0.00 3.18
76 77 1.503818 GCGCAACTTCTCCCGTGAAA 61.504 55.000 0.30 0.00 0.00 2.69
77 78 0.941542 CGCAACTTCTCCCGTGAAAA 59.058 50.000 0.00 0.00 0.00 2.29
78 79 1.332375 CGCAACTTCTCCCGTGAAAAA 59.668 47.619 0.00 0.00 0.00 1.94
99 100 7.589574 AAAAAGTTTTTCAAGTTATGCACGT 57.410 28.000 7.79 0.00 0.00 4.49
100 101 7.589574 AAAAGTTTTTCAAGTTATGCACGTT 57.410 28.000 0.00 0.00 0.00 3.99
101 102 7.589574 AAAGTTTTTCAAGTTATGCACGTTT 57.410 28.000 0.00 0.00 0.00 3.60
102 103 8.690680 AAAGTTTTTCAAGTTATGCACGTTTA 57.309 26.923 0.00 0.00 0.00 2.01
103 104 7.908193 AGTTTTTCAAGTTATGCACGTTTAG 57.092 32.000 0.00 0.00 0.00 1.85
104 105 7.699566 AGTTTTTCAAGTTATGCACGTTTAGA 58.300 30.769 0.00 0.00 0.00 2.10
105 106 8.349983 AGTTTTTCAAGTTATGCACGTTTAGAT 58.650 29.630 0.00 0.00 0.00 1.98
106 107 9.601971 GTTTTTCAAGTTATGCACGTTTAGATA 57.398 29.630 0.00 0.00 0.00 1.98
107 108 9.601971 TTTTTCAAGTTATGCACGTTTAGATAC 57.398 29.630 0.00 0.00 0.00 2.24
108 109 6.563398 TCAAGTTATGCACGTTTAGATACG 57.437 37.500 0.00 0.00 46.52 3.06
109 110 5.005012 TCAAGTTATGCACGTTTAGATACGC 59.995 40.000 0.00 0.00 45.06 4.42
110 111 3.484649 AGTTATGCACGTTTAGATACGCG 59.515 43.478 3.53 3.53 45.06 6.01
111 112 1.917273 ATGCACGTTTAGATACGCGT 58.083 45.000 19.17 19.17 45.06 6.01
112 113 1.700523 TGCACGTTTAGATACGCGTT 58.299 45.000 20.78 5.14 45.06 4.84
113 114 1.650153 TGCACGTTTAGATACGCGTTC 59.350 47.619 20.78 15.05 45.06 3.95
114 115 1.916000 GCACGTTTAGATACGCGTTCT 59.084 47.619 20.78 21.33 45.06 3.01
115 116 2.284288 GCACGTTTAGATACGCGTTCTG 60.284 50.000 20.78 10.42 45.06 3.02
116 117 1.916000 ACGTTTAGATACGCGTTCTGC 59.084 47.619 20.78 12.91 45.06 4.26
117 118 2.182825 CGTTTAGATACGCGTTCTGCT 58.817 47.619 20.78 12.40 43.27 4.24
118 119 2.213575 CGTTTAGATACGCGTTCTGCTC 59.786 50.000 20.78 7.20 43.27 4.26
119 120 2.101053 TTAGATACGCGTTCTGCTCG 57.899 50.000 20.78 0.00 43.27 5.03
120 121 1.292992 TAGATACGCGTTCTGCTCGA 58.707 50.000 20.78 0.00 43.27 4.04
121 122 0.450583 AGATACGCGTTCTGCTCGAA 59.549 50.000 20.78 0.00 43.27 3.71
122 123 0.566593 GATACGCGTTCTGCTCGAAC 59.433 55.000 20.78 8.74 46.78 3.95
130 131 2.717580 TTCTGCTCGAACACGTATGT 57.282 45.000 0.00 0.00 42.46 2.29
146 147 8.964420 ACACGTATGTTTTTGATCCATAAAAG 57.036 30.769 0.00 0.00 34.46 2.27
147 148 7.540745 ACACGTATGTTTTTGATCCATAAAAGC 59.459 33.333 0.00 0.00 34.46 3.51
148 149 6.745450 ACGTATGTTTTTGATCCATAAAAGCG 59.255 34.615 0.00 0.00 32.91 4.68
149 150 6.964370 CGTATGTTTTTGATCCATAAAAGCGA 59.036 34.615 0.00 0.00 32.91 4.93
150 151 7.643764 CGTATGTTTTTGATCCATAAAAGCGAT 59.356 33.333 0.00 0.00 32.91 4.58
151 152 9.301153 GTATGTTTTTGATCCATAAAAGCGATT 57.699 29.630 0.00 0.00 32.91 3.34
152 153 8.776376 ATGTTTTTGATCCATAAAAGCGATTT 57.224 26.923 0.00 0.00 32.91 2.17
153 154 8.600449 TGTTTTTGATCCATAAAAGCGATTTT 57.400 26.923 16.41 16.41 32.91 1.82
154 155 9.050601 TGTTTTTGATCCATAAAAGCGATTTTT 57.949 25.926 17.42 9.71 41.68 1.94
157 158 7.962934 TTGATCCATAAAAGCGATTTTTACG 57.037 32.000 17.42 5.87 42.39 3.18
158 159 6.491394 TGATCCATAAAAGCGATTTTTACGG 58.509 36.000 17.42 14.27 42.93 4.02
159 160 5.238006 TCCATAAAAGCGATTTTTACGGG 57.762 39.130 17.42 12.82 42.23 5.28
160 161 4.701171 TCCATAAAAGCGATTTTTACGGGT 59.299 37.500 17.42 0.00 42.23 5.28
161 162 5.032220 CCATAAAAGCGATTTTTACGGGTC 58.968 41.667 17.42 0.00 42.39 4.46
162 163 2.886587 AAAGCGATTTTTACGGGTCG 57.113 45.000 0.00 0.00 37.17 4.79
163 164 1.799544 AAGCGATTTTTACGGGTCGT 58.200 45.000 0.00 0.00 44.35 4.34
164 165 2.652941 AGCGATTTTTACGGGTCGTA 57.347 45.000 0.00 0.00 41.54 3.43
165 166 3.169355 AGCGATTTTTACGGGTCGTAT 57.831 42.857 0.94 0.00 41.97 3.06
166 167 3.524541 AGCGATTTTTACGGGTCGTATT 58.475 40.909 0.94 0.00 41.97 1.89
167 168 3.934579 AGCGATTTTTACGGGTCGTATTT 59.065 39.130 0.94 0.00 41.97 1.40
168 169 4.392754 AGCGATTTTTACGGGTCGTATTTT 59.607 37.500 0.94 0.00 41.97 1.82
169 170 5.088068 GCGATTTTTACGGGTCGTATTTTT 58.912 37.500 0.94 0.00 41.97 1.94
170 171 5.002747 GCGATTTTTACGGGTCGTATTTTTG 59.997 40.000 0.94 0.00 41.97 2.44
171 172 5.002747 CGATTTTTACGGGTCGTATTTTTGC 59.997 40.000 0.94 0.00 41.97 3.68
172 173 3.452466 TTTACGGGTCGTATTTTTGCG 57.548 42.857 0.94 0.00 41.97 4.85
173 174 1.357907 TACGGGTCGTATTTTTGCGG 58.642 50.000 0.00 0.00 41.54 5.69
174 175 1.300266 ACGGGTCGTATTTTTGCGGG 61.300 55.000 0.00 0.00 38.73 6.13
175 176 1.804598 GGGTCGTATTTTTGCGGGG 59.195 57.895 0.00 0.00 0.00 5.73
176 177 0.961857 GGGTCGTATTTTTGCGGGGT 60.962 55.000 0.00 0.00 0.00 4.95
177 178 0.448990 GGTCGTATTTTTGCGGGGTC 59.551 55.000 0.00 0.00 0.00 4.46
178 179 1.445871 GTCGTATTTTTGCGGGGTCT 58.554 50.000 0.00 0.00 0.00 3.85
179 180 1.129811 GTCGTATTTTTGCGGGGTCTG 59.870 52.381 0.00 0.00 0.00 3.51
180 181 0.450184 CGTATTTTTGCGGGGTCTGG 59.550 55.000 0.00 0.00 0.00 3.86
181 182 1.541379 GTATTTTTGCGGGGTCTGGT 58.459 50.000 0.00 0.00 0.00 4.00
182 183 2.713877 GTATTTTTGCGGGGTCTGGTA 58.286 47.619 0.00 0.00 0.00 3.25
183 184 1.834188 ATTTTTGCGGGGTCTGGTAG 58.166 50.000 0.00 0.00 0.00 3.18
184 185 0.766131 TTTTTGCGGGGTCTGGTAGA 59.234 50.000 0.00 0.00 0.00 2.59
185 186 0.323629 TTTTGCGGGGTCTGGTAGAG 59.676 55.000 0.00 0.00 0.00 2.43
186 187 0.834687 TTTGCGGGGTCTGGTAGAGT 60.835 55.000 0.00 0.00 0.00 3.24
187 188 0.834687 TTGCGGGGTCTGGTAGAGTT 60.835 55.000 0.00 0.00 0.00 3.01
188 189 1.218316 GCGGGGTCTGGTAGAGTTG 59.782 63.158 0.00 0.00 0.00 3.16
189 190 1.218316 CGGGGTCTGGTAGAGTTGC 59.782 63.158 0.00 0.00 0.00 4.17
190 191 1.258445 CGGGGTCTGGTAGAGTTGCT 61.258 60.000 0.00 0.00 0.00 3.91
197 198 2.163815 TCTGGTAGAGTTGCTCTTACGC 59.836 50.000 3.87 0.00 41.50 4.42
208 209 3.782046 TGCTCTTACGCTGGTTTCTATC 58.218 45.455 0.00 0.00 0.00 2.08
247 248 4.355437 CACCAGCTTTCTATCGTCTAGTG 58.645 47.826 0.00 0.00 0.00 2.74
260 261 8.457261 TCTATCGTCTAGTGTAGAAAGGAAAAC 58.543 37.037 0.00 0.00 36.40 2.43
276 277 5.689819 AGGAAAACAAGATCATTTTCGTCG 58.310 37.500 16.95 0.00 42.98 5.12
278 279 3.471495 AACAAGATCATTTTCGTCGCC 57.529 42.857 0.00 0.00 0.00 5.54
336 337 4.727235 AAAGGATCACGAAGAAAACGAC 57.273 40.909 0.00 0.00 34.70 4.34
348 349 0.458025 AAAACGACCGATCTCTCGCC 60.458 55.000 8.39 0.00 43.66 5.54
393 394 1.142748 GGTGACGCCTCATCCTCAG 59.857 63.158 0.00 0.00 0.00 3.35
394 395 1.608717 GGTGACGCCTCATCCTCAGT 61.609 60.000 0.00 0.00 0.00 3.41
396 397 1.142748 GACGCCTCATCCTCAGTGG 59.857 63.158 0.00 0.00 37.10 4.00
432 433 2.273449 CAGGGCAGGTTAGGCAGG 59.727 66.667 0.00 0.00 35.46 4.85
503 504 4.132336 GAGCAATATTCTCATCCAGTGCA 58.868 43.478 8.95 0.00 33.21 4.57
544 545 4.253685 GGCACTACATGTTTGAGAAGCTA 58.746 43.478 2.30 0.00 0.00 3.32
625 626 2.868899 AGAGCAAACTTCAGGAAAGGG 58.131 47.619 0.00 0.00 39.47 3.95
942 949 7.916914 ATTAAGGTACGCTTTTGACATACTT 57.083 32.000 2.53 0.00 0.00 2.24
968 975 4.724279 AAAAAGGTTAGGCAGGAGAAGA 57.276 40.909 0.00 0.00 0.00 2.87
969 976 3.704800 AAAGGTTAGGCAGGAGAAGAC 57.295 47.619 0.00 0.00 0.00 3.01
970 977 1.187087 AGGTTAGGCAGGAGAAGACG 58.813 55.000 0.00 0.00 0.00 4.18
971 978 0.175989 GGTTAGGCAGGAGAAGACGG 59.824 60.000 0.00 0.00 0.00 4.79
972 979 0.896226 GTTAGGCAGGAGAAGACGGT 59.104 55.000 0.00 0.00 0.00 4.83
973 980 0.895530 TTAGGCAGGAGAAGACGGTG 59.104 55.000 0.00 0.00 0.00 4.94
974 981 1.605058 TAGGCAGGAGAAGACGGTGC 61.605 60.000 0.00 0.00 0.00 5.01
1008 1015 3.367395 GCCGAAGAAGAAAAATGGAAGGG 60.367 47.826 0.00 0.00 0.00 3.95
1013 1020 1.839424 AGAAAAATGGAAGGGAGGCG 58.161 50.000 0.00 0.00 0.00 5.52
1046 1067 2.413765 CGTAGCTCGAAGGAGGCC 59.586 66.667 0.00 0.00 42.86 5.19
1072 1093 1.114627 CACTGATGACATCCCCGAGA 58.885 55.000 12.90 0.00 0.00 4.04
1079 1100 1.152226 ACATCCCCGAGATCTCCCC 60.152 63.158 17.13 0.00 30.59 4.81
1245 1281 2.317609 CGTGTGCTCCTGGTTTCCG 61.318 63.158 0.00 0.00 0.00 4.30
1250 1286 1.301479 GCTCCTGGTTTCCGACGTT 60.301 57.895 0.00 0.00 0.00 3.99
1282 1318 1.214589 GGTCACAGGTATCGTGCGT 59.785 57.895 0.00 0.00 34.27 5.24
1315 1351 5.532025 GTCTTTTGACGTGGAAGGATAAG 57.468 43.478 0.00 0.00 39.89 1.73
1316 1352 5.235516 GTCTTTTGACGTGGAAGGATAAGA 58.764 41.667 0.00 0.00 39.89 2.10
1317 1353 5.875359 GTCTTTTGACGTGGAAGGATAAGAT 59.125 40.000 0.00 0.00 39.89 2.40
1320 1356 7.548075 TCTTTTGACGTGGAAGGATAAGATAAC 59.452 37.037 0.00 0.00 0.00 1.89
1321 1357 5.272283 TGACGTGGAAGGATAAGATAACC 57.728 43.478 0.00 0.00 0.00 2.85
1322 1358 4.712829 TGACGTGGAAGGATAAGATAACCA 59.287 41.667 0.00 0.00 0.00 3.67
1444 1547 2.178273 GGGCGGAATGTTTCGTGC 59.822 61.111 0.00 0.00 0.00 5.34
1457 1560 2.570468 TTCGTGCATCTTTTCGTTCG 57.430 45.000 0.00 0.00 0.00 3.95
1481 1584 2.748058 AATGGCGTGCCGTTCTTCCT 62.748 55.000 12.50 0.00 41.08 3.36
1482 1585 3.423154 GGCGTGCCGTTCTTCCTG 61.423 66.667 0.00 0.00 0.00 3.86
1483 1586 3.423154 GCGTGCCGTTCTTCCTGG 61.423 66.667 0.00 0.00 0.00 4.45
1484 1587 2.030562 CGTGCCGTTCTTCCTGGT 59.969 61.111 0.00 0.00 0.00 4.00
1485 1588 1.290955 CGTGCCGTTCTTCCTGGTA 59.709 57.895 0.00 0.00 0.00 3.25
1486 1589 0.736325 CGTGCCGTTCTTCCTGGTAG 60.736 60.000 0.00 0.00 0.00 3.18
1487 1590 0.606604 GTGCCGTTCTTCCTGGTAGA 59.393 55.000 0.00 0.00 0.00 2.59
1488 1591 0.606604 TGCCGTTCTTCCTGGTAGAC 59.393 55.000 2.13 0.00 0.00 2.59
1489 1592 0.896226 GCCGTTCTTCCTGGTAGACT 59.104 55.000 2.13 0.00 0.00 3.24
1510 1613 2.061773 CTTGCGTGATCTTCGTGACTT 58.938 47.619 11.15 0.00 0.00 3.01
1581 1684 1.300853 CCTTTTGCCTTTGCGTGGG 60.301 57.895 0.00 0.00 41.78 4.61
1604 1790 2.359900 CTAGTCAAGCACATCCAACCC 58.640 52.381 0.00 0.00 0.00 4.11
1609 1795 0.322187 AAGCACATCCAACCCCGTAC 60.322 55.000 0.00 0.00 0.00 3.67
1646 1832 1.745489 GCAACCACGGTCTGGATCC 60.745 63.158 4.20 4.20 43.95 3.36
1667 1853 0.464036 TCGATCCCTGTGATTTCGGG 59.536 55.000 0.00 0.00 39.41 5.14
1669 1855 0.107214 GATCCCTGTGATTTCGGGCA 60.107 55.000 0.00 0.00 37.89 5.36
1675 1861 2.098117 CCTGTGATTTCGGGCAATCTTC 59.902 50.000 0.00 0.00 34.66 2.87
1679 1865 2.239654 TGATTTCGGGCAATCTTCCTCT 59.760 45.455 0.00 0.00 34.66 3.69
1682 1868 1.821332 CGGGCAATCTTCCTCTGGC 60.821 63.158 0.00 0.00 35.03 4.85
1764 1955 3.596310 TTTATGCAGCGTGGTAGTACA 57.404 42.857 2.06 0.00 0.00 2.90
1781 1972 5.557891 AGTACAACTACTACATCCGTGTC 57.442 43.478 0.00 0.00 39.77 3.67
1782 1973 5.005740 AGTACAACTACTACATCCGTGTCA 58.994 41.667 0.00 0.00 39.77 3.58
1783 1974 5.651139 AGTACAACTACTACATCCGTGTCAT 59.349 40.000 0.00 0.00 39.77 3.06
1784 1975 4.744570 ACAACTACTACATCCGTGTCATG 58.255 43.478 0.00 0.00 39.77 3.07
1786 1977 5.168569 CAACTACTACATCCGTGTCATGTT 58.831 41.667 0.00 0.00 39.77 2.71
1787 1978 5.401531 ACTACTACATCCGTGTCATGTTT 57.598 39.130 0.00 0.00 39.77 2.83
1789 1980 7.108841 ACTACTACATCCGTGTCATGTTTAT 57.891 36.000 0.00 0.00 39.77 1.40
1790 1981 7.553334 ACTACTACATCCGTGTCATGTTTATT 58.447 34.615 0.00 0.00 39.77 1.40
1792 1983 9.181805 CTACTACATCCGTGTCATGTTTATTAG 57.818 37.037 0.00 0.00 39.77 1.73
1793 1984 7.553334 ACTACATCCGTGTCATGTTTATTAGT 58.447 34.615 0.00 0.00 39.77 2.24
1794 1985 6.903883 ACATCCGTGTCATGTTTATTAGTC 57.096 37.500 0.00 0.00 31.41 2.59
1795 1986 6.640518 ACATCCGTGTCATGTTTATTAGTCT 58.359 36.000 0.00 0.00 31.41 3.24
1796 1987 7.103641 ACATCCGTGTCATGTTTATTAGTCTT 58.896 34.615 0.00 0.00 31.41 3.01
1797 1988 7.606456 ACATCCGTGTCATGTTTATTAGTCTTT 59.394 33.333 0.00 0.00 31.41 2.52
1798 1989 7.972832 TCCGTGTCATGTTTATTAGTCTTTT 57.027 32.000 0.00 0.00 0.00 2.27
1799 1990 8.385898 TCCGTGTCATGTTTATTAGTCTTTTT 57.614 30.769 0.00 0.00 0.00 1.94
1820 2011 6.693315 TTTTGTACTCCCTCAGTTTTTCAG 57.307 37.500 0.00 0.00 36.43 3.02
1821 2012 5.367945 TTGTACTCCCTCAGTTTTTCAGT 57.632 39.130 0.00 0.00 36.43 3.41
1822 2013 4.957296 TGTACTCCCTCAGTTTTTCAGTC 58.043 43.478 0.00 0.00 36.43 3.51
1823 2014 4.654262 TGTACTCCCTCAGTTTTTCAGTCT 59.346 41.667 0.00 0.00 36.43 3.24
1824 2015 4.779993 ACTCCCTCAGTTTTTCAGTCTT 57.220 40.909 0.00 0.00 26.56 3.01
1825 2016 4.709250 ACTCCCTCAGTTTTTCAGTCTTC 58.291 43.478 0.00 0.00 26.56 2.87
1826 2017 4.164221 ACTCCCTCAGTTTTTCAGTCTTCA 59.836 41.667 0.00 0.00 26.56 3.02
1827 2018 5.163152 ACTCCCTCAGTTTTTCAGTCTTCAT 60.163 40.000 0.00 0.00 26.56 2.57
1828 2019 6.043243 ACTCCCTCAGTTTTTCAGTCTTCATA 59.957 38.462 0.00 0.00 26.56 2.15
1829 2020 7.020827 TCCCTCAGTTTTTCAGTCTTCATAT 57.979 36.000 0.00 0.00 0.00 1.78
1830 2021 8.146053 TCCCTCAGTTTTTCAGTCTTCATATA 57.854 34.615 0.00 0.00 0.00 0.86
1832 2023 8.887717 CCCTCAGTTTTTCAGTCTTCATATAAG 58.112 37.037 0.00 0.00 0.00 1.73
1833 2024 9.658799 CCTCAGTTTTTCAGTCTTCATATAAGA 57.341 33.333 0.00 0.00 0.00 2.10
1839 2030 9.739276 TTTTTCAGTCTTCATATAAGATGTGGT 57.261 29.630 0.00 0.00 0.00 4.16
1840 2031 9.739276 TTTTCAGTCTTCATATAAGATGTGGTT 57.261 29.630 0.00 0.00 0.00 3.67
1904 2095 9.853555 AAAAATATCAACATCTGCAATACGAAA 57.146 25.926 0.00 0.00 0.00 3.46
1905 2096 9.507280 AAAATATCAACATCTGCAATACGAAAG 57.493 29.630 0.00 0.00 0.00 2.62
1906 2097 4.340894 TCAACATCTGCAATACGAAAGC 57.659 40.909 0.00 0.00 0.00 3.51
1907 2098 4.002982 TCAACATCTGCAATACGAAAGCT 58.997 39.130 0.00 0.00 0.00 3.74
1908 2099 5.175127 TCAACATCTGCAATACGAAAGCTA 58.825 37.500 0.00 0.00 0.00 3.32
1909 2100 5.817296 TCAACATCTGCAATACGAAAGCTAT 59.183 36.000 0.00 0.00 0.00 2.97
1910 2101 6.983890 TCAACATCTGCAATACGAAAGCTATA 59.016 34.615 0.00 0.00 0.00 1.31
1911 2102 7.657354 TCAACATCTGCAATACGAAAGCTATAT 59.343 33.333 0.00 0.00 0.00 0.86
1912 2103 7.356641 ACATCTGCAATACGAAAGCTATATG 57.643 36.000 0.00 0.00 0.00 1.78
1914 2105 7.442364 ACATCTGCAATACGAAAGCTATATGTT 59.558 33.333 0.00 0.00 0.00 2.71
1915 2106 8.925700 CATCTGCAATACGAAAGCTATATGTTA 58.074 33.333 0.00 0.00 0.00 2.41
1917 2108 8.925700 TCTGCAATACGAAAGCTATATGTTATG 58.074 33.333 0.00 0.00 0.00 1.90
1919 2110 9.267084 TGCAATACGAAAGCTATATGTTATGAA 57.733 29.630 0.00 0.00 0.00 2.57
1957 2794 8.909923 TGATGCATCTAACAATCTTGATTTCAT 58.090 29.630 26.32 0.00 0.00 2.57
2033 2870 9.118236 GTTTGACTTTGACTAAATCTTATGTGC 57.882 33.333 0.00 0.00 0.00 4.57
2034 2871 7.977789 TGACTTTGACTAAATCTTATGTGCA 57.022 32.000 0.00 0.00 0.00 4.57
2035 2872 8.032952 TGACTTTGACTAAATCTTATGTGCAG 57.967 34.615 0.00 0.00 0.00 4.41
2036 2873 7.877612 TGACTTTGACTAAATCTTATGTGCAGA 59.122 33.333 0.00 0.00 0.00 4.26
2037 2874 8.034058 ACTTTGACTAAATCTTATGTGCAGAC 57.966 34.615 0.00 0.00 0.00 3.51
2038 2875 7.880195 ACTTTGACTAAATCTTATGTGCAGACT 59.120 33.333 0.00 0.00 0.00 3.24
2039 2876 9.371136 CTTTGACTAAATCTTATGTGCAGACTA 57.629 33.333 0.00 0.00 0.00 2.59
2040 2877 9.719355 TTTGACTAAATCTTATGTGCAGACTAA 57.281 29.630 0.00 0.00 0.00 2.24
2041 2878 9.719355 TTGACTAAATCTTATGTGCAGACTAAA 57.281 29.630 0.00 0.00 0.00 1.85
2042 2879 9.719355 TGACTAAATCTTATGTGCAGACTAAAA 57.281 29.630 0.00 0.00 0.00 1.52
2048 2885 9.899226 AATCTTATGTGCAGACTAAAAAGAAAC 57.101 29.630 0.00 0.00 0.00 2.78
2049 2886 8.445275 TCTTATGTGCAGACTAAAAAGAAACA 57.555 30.769 0.00 0.00 0.00 2.83
2050 2887 8.559536 TCTTATGTGCAGACTAAAAAGAAACAG 58.440 33.333 0.00 0.00 0.00 3.16
2051 2888 6.942532 ATGTGCAGACTAAAAAGAAACAGA 57.057 33.333 0.00 0.00 0.00 3.41
2052 2889 6.363577 TGTGCAGACTAAAAAGAAACAGAG 57.636 37.500 0.00 0.00 0.00 3.35
2053 2890 5.296780 TGTGCAGACTAAAAAGAAACAGAGG 59.703 40.000 0.00 0.00 0.00 3.69
2054 2891 4.821805 TGCAGACTAAAAAGAAACAGAGGG 59.178 41.667 0.00 0.00 0.00 4.30
2055 2892 5.063880 GCAGACTAAAAAGAAACAGAGGGA 58.936 41.667 0.00 0.00 0.00 4.20
2056 2893 5.180304 GCAGACTAAAAAGAAACAGAGGGAG 59.820 44.000 0.00 0.00 0.00 4.30
2057 2894 6.292150 CAGACTAAAAAGAAACAGAGGGAGT 58.708 40.000 0.00 0.00 0.00 3.85
2058 2895 7.442656 CAGACTAAAAAGAAACAGAGGGAGTA 58.557 38.462 0.00 0.00 0.00 2.59
2059 2896 7.931948 CAGACTAAAAAGAAACAGAGGGAGTAA 59.068 37.037 0.00 0.00 0.00 2.24
2060 2897 8.661345 AGACTAAAAAGAAACAGAGGGAGTAAT 58.339 33.333 0.00 0.00 0.00 1.89
2061 2898 9.286170 GACTAAAAAGAAACAGAGGGAGTAATT 57.714 33.333 0.00 0.00 0.00 1.40
2062 2899 9.642343 ACTAAAAAGAAACAGAGGGAGTAATTT 57.358 29.630 0.00 0.00 0.00 1.82
2063 2900 9.899226 CTAAAAAGAAACAGAGGGAGTAATTTG 57.101 33.333 0.00 0.00 0.00 2.32
2064 2901 7.898014 AAAAGAAACAGAGGGAGTAATTTGT 57.102 32.000 0.00 0.00 0.00 2.83
2065 2902 6.884280 AAGAAACAGAGGGAGTAATTTGTG 57.116 37.500 0.00 0.00 0.00 3.33
2066 2903 5.941788 AGAAACAGAGGGAGTAATTTGTGT 58.058 37.500 0.00 0.00 0.00 3.72
2067 2904 5.998363 AGAAACAGAGGGAGTAATTTGTGTC 59.002 40.000 0.00 0.00 0.00 3.67
2068 2905 4.974645 ACAGAGGGAGTAATTTGTGTCA 57.025 40.909 0.00 0.00 0.00 3.58
2069 2906 5.304686 ACAGAGGGAGTAATTTGTGTCAA 57.695 39.130 0.00 0.00 0.00 3.18
2070 2907 5.690865 ACAGAGGGAGTAATTTGTGTCAAA 58.309 37.500 0.00 0.00 0.00 2.69
2071 2908 6.306987 ACAGAGGGAGTAATTTGTGTCAAAT 58.693 36.000 2.42 2.42 0.00 2.32
2072 2909 6.777580 ACAGAGGGAGTAATTTGTGTCAAATT 59.222 34.615 19.42 19.42 34.55 1.82
2073 2910 7.287696 ACAGAGGGAGTAATTTGTGTCAAATTT 59.712 33.333 20.29 8.24 32.64 1.82
2074 2911 8.143835 CAGAGGGAGTAATTTGTGTCAAATTTT 58.856 33.333 20.29 12.27 32.64 1.82
2075 2912 8.143835 AGAGGGAGTAATTTGTGTCAAATTTTG 58.856 33.333 20.29 2.59 32.64 2.44
2076 2913 8.017418 AGGGAGTAATTTGTGTCAAATTTTGA 57.983 30.769 20.29 7.74 37.33 2.69
2118 2955 9.823647 AACAAATTGTAAATACATGTCCACAAA 57.176 25.926 0.00 0.00 35.89 2.83
2119 2956 9.823647 ACAAATTGTAAATACATGTCCACAAAA 57.176 25.926 0.00 0.00 35.89 2.44
2292 3166 2.558359 AGCTGTGAAAGAATTTTCCCGG 59.442 45.455 0.00 0.00 39.27 5.73
2316 3190 6.263516 GGGACCACCAAAAGTAAAGTTATC 57.736 41.667 0.00 0.00 39.85 1.75
2319 3193 5.960704 ACCACCAAAAGTAAAGTTATCCCT 58.039 37.500 0.00 0.00 0.00 4.20
2323 3197 7.201965 CCACCAAAAGTAAAGTTATCCCTGTTT 60.202 37.037 0.00 0.00 0.00 2.83
2324 3198 7.865889 CACCAAAAGTAAAGTTATCCCTGTTTC 59.134 37.037 0.00 0.00 0.00 2.78
2341 3215 3.500680 TGTTTCTTCTTTACATCGTGGGC 59.499 43.478 0.00 0.00 0.00 5.36
2342 3216 2.004583 TCTTCTTTACATCGTGGGCG 57.995 50.000 0.00 0.00 39.92 6.13
2343 3217 1.006832 CTTCTTTACATCGTGGGCGG 58.993 55.000 0.00 0.00 38.89 6.13
2344 3218 0.391927 TTCTTTACATCGTGGGCGGG 60.392 55.000 0.00 0.00 38.89 6.13
2345 3219 2.437002 TTTACATCGTGGGCGGGC 60.437 61.111 0.00 0.00 38.89 6.13
2346 3220 4.823419 TTACATCGTGGGCGGGCG 62.823 66.667 0.00 0.00 38.89 6.13
2388 3262 5.440234 TGATAAGCAGCTACTACTAGTGC 57.560 43.478 5.39 0.00 31.95 4.40
2389 3263 4.887655 TGATAAGCAGCTACTACTAGTGCA 59.112 41.667 5.39 0.00 33.17 4.57
2390 3264 3.512033 AAGCAGCTACTACTAGTGCAC 57.488 47.619 9.40 9.40 33.17 4.57
2394 3268 2.425312 CAGCTACTACTAGTGCACAGCT 59.575 50.000 21.04 18.79 37.01 4.24
2395 3269 3.628032 CAGCTACTACTAGTGCACAGCTA 59.372 47.826 21.01 4.91 35.03 3.32
2396 3270 4.277174 CAGCTACTACTAGTGCACAGCTAT 59.723 45.833 21.01 3.23 35.03 2.97
2397 3271 4.277174 AGCTACTACTAGTGCACAGCTATG 59.723 45.833 20.34 8.56 35.37 2.23
2398 3272 4.276183 GCTACTACTAGTGCACAGCTATGA 59.724 45.833 21.04 0.00 0.00 2.15
2399 3273 5.221067 GCTACTACTAGTGCACAGCTATGAA 60.221 44.000 21.04 0.00 0.00 2.57
2400 3274 5.661056 ACTACTAGTGCACAGCTATGAAA 57.339 39.130 21.04 0.00 0.00 2.69
2401 3275 6.227298 ACTACTAGTGCACAGCTATGAAAT 57.773 37.500 21.04 0.00 0.00 2.17
2423 3297 1.478105 TCACAGTCCGATGGATCACAG 59.522 52.381 0.00 0.00 32.73 3.66
2435 3309 0.457851 GATCACAGTCGGACCCTCTG 59.542 60.000 4.14 8.48 35.60 3.35
2449 3323 1.648720 CTCTGCACCCACACAAACG 59.351 57.895 0.00 0.00 0.00 3.60
2453 3327 2.781158 GCACCCACACAAACGCCTT 61.781 57.895 0.00 0.00 0.00 4.35
2455 3329 2.184167 ACCCACACAAACGCCTTCG 61.184 57.895 0.00 0.00 42.43 3.79
2484 3358 2.113986 GCCACAGGCCACAAGTCT 59.886 61.111 5.01 0.00 44.06 3.24
2485 3359 1.968540 GCCACAGGCCACAAGTCTC 60.969 63.158 5.01 0.00 44.06 3.36
2486 3360 1.669115 CCACAGGCCACAAGTCTCG 60.669 63.158 5.01 0.00 0.00 4.04
2487 3361 2.031163 ACAGGCCACAAGTCTCGC 59.969 61.111 5.01 0.00 0.00 5.03
2488 3362 3.114616 CAGGCCACAAGTCTCGCG 61.115 66.667 5.01 0.00 0.00 5.87
2492 3366 3.470567 CCACAAGTCTCGCGCGTC 61.471 66.667 30.98 20.25 0.00 5.19
2493 3367 3.470567 CACAAGTCTCGCGCGTCC 61.471 66.667 30.98 18.02 0.00 4.79
2494 3368 3.671411 ACAAGTCTCGCGCGTCCT 61.671 61.111 30.98 20.01 0.00 3.85
2495 3369 2.430921 CAAGTCTCGCGCGTCCTT 60.431 61.111 30.98 24.27 0.00 3.36
2507 3381 1.026584 GCGTCCTTCCTCTCCTCTAC 58.973 60.000 0.00 0.00 0.00 2.59
2510 3384 0.935194 TCCTTCCTCTCCTCTACCCC 59.065 60.000 0.00 0.00 0.00 4.95
2566 3444 3.186047 GAACCCATCGCGTCACCG 61.186 66.667 5.77 0.00 37.07 4.94
2628 3506 4.409570 CAACATAGCAGCAAGTTGACATC 58.590 43.478 15.61 0.00 42.87 3.06
2629 3507 3.947868 ACATAGCAGCAAGTTGACATCT 58.052 40.909 7.16 0.14 0.00 2.90
2630 3508 4.330250 ACATAGCAGCAAGTTGACATCTT 58.670 39.130 7.16 0.00 0.00 2.40
2631 3509 4.394300 ACATAGCAGCAAGTTGACATCTTC 59.606 41.667 7.16 0.00 0.00 2.87
2649 3527 3.586039 CGTCCGTTCACGTACGTAT 57.414 52.632 22.34 0.00 44.60 3.06
2657 3535 3.723542 CGTTCACGTACGTATGTTCGGTA 60.724 47.826 22.34 0.00 42.38 4.02
2672 3550 7.925043 ATGTTCGGTAGTTCGATCTATCTAT 57.075 36.000 11.12 0.26 39.03 1.98
2682 3560 7.907389 AGTTCGATCTATCTATATGGCCAAAA 58.093 34.615 10.96 0.12 0.00 2.44
2726 3604 3.564027 CGATCAACCGCCGCCTTC 61.564 66.667 0.00 0.00 0.00 3.46
2751 3629 1.458639 AACAACAGAAGCAGCTGCCC 61.459 55.000 34.39 25.43 43.38 5.36
2752 3630 2.670934 AACAGAAGCAGCTGCCCG 60.671 61.111 34.39 21.71 43.38 6.13
2819 3697 0.248417 CTGACCAGAGCAGATCGACG 60.248 60.000 0.00 0.00 35.39 5.12
2827 3705 0.395311 AGCAGATCGACGGGAGGTTA 60.395 55.000 0.00 0.00 0.00 2.85
2842 3727 3.373130 GGAGGTTAAATGTTCGGTGCTAC 59.627 47.826 0.00 0.00 0.00 3.58
2843 3728 4.251268 GAGGTTAAATGTTCGGTGCTACT 58.749 43.478 0.00 0.00 0.00 2.57
2844 3729 4.251268 AGGTTAAATGTTCGGTGCTACTC 58.749 43.478 0.00 0.00 0.00 2.59
2845 3730 3.373130 GGTTAAATGTTCGGTGCTACTCC 59.627 47.826 0.00 0.00 0.00 3.85
2876 3761 1.864176 CGGAAAAGCACCGTGTACC 59.136 57.895 0.00 0.00 44.57 3.34
2877 3762 1.864176 GGAAAAGCACCGTGTACCG 59.136 57.895 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.141268 TCATCGCATACTACATAGTTCATCAAA 58.859 33.333 0.00 0.00 37.73 2.69
1 2 7.657336 TCATCGCATACTACATAGTTCATCAA 58.343 34.615 0.00 0.00 37.73 2.57
2 3 7.214467 TCATCGCATACTACATAGTTCATCA 57.786 36.000 0.00 0.00 37.73 3.07
3 4 7.595130 TGTTCATCGCATACTACATAGTTCATC 59.405 37.037 0.00 0.00 37.73 2.92
4 5 7.433680 TGTTCATCGCATACTACATAGTTCAT 58.566 34.615 0.00 0.00 37.73 2.57
5 6 6.801575 TGTTCATCGCATACTACATAGTTCA 58.198 36.000 0.00 0.00 37.73 3.18
6 7 7.694388 TTGTTCATCGCATACTACATAGTTC 57.306 36.000 0.00 0.00 37.73 3.01
7 8 7.710907 ACATTGTTCATCGCATACTACATAGTT 59.289 33.333 0.00 0.00 37.73 2.24
8 9 7.210174 ACATTGTTCATCGCATACTACATAGT 58.790 34.615 0.00 0.00 40.24 2.12
9 10 7.643528 ACATTGTTCATCGCATACTACATAG 57.356 36.000 0.00 0.00 0.00 2.23
10 11 8.357402 ACTACATTGTTCATCGCATACTACATA 58.643 33.333 0.00 0.00 0.00 2.29
11 12 7.210174 ACTACATTGTTCATCGCATACTACAT 58.790 34.615 0.00 0.00 0.00 2.29
12 13 6.569780 ACTACATTGTTCATCGCATACTACA 58.430 36.000 0.00 0.00 0.00 2.74
13 14 8.639428 CATACTACATTGTTCATCGCATACTAC 58.361 37.037 0.00 0.00 0.00 2.73
14 15 8.357402 ACATACTACATTGTTCATCGCATACTA 58.643 33.333 0.00 0.00 0.00 1.82
15 16 7.169813 CACATACTACATTGTTCATCGCATACT 59.830 37.037 0.00 0.00 0.00 2.12
16 17 7.042725 ACACATACTACATTGTTCATCGCATAC 60.043 37.037 0.00 0.00 0.00 2.39
17 18 6.983890 ACACATACTACATTGTTCATCGCATA 59.016 34.615 0.00 0.00 0.00 3.14
18 19 5.817296 ACACATACTACATTGTTCATCGCAT 59.183 36.000 0.00 0.00 0.00 4.73
19 20 5.063312 CACACATACTACATTGTTCATCGCA 59.937 40.000 0.00 0.00 0.00 5.10
20 21 5.290885 TCACACATACTACATTGTTCATCGC 59.709 40.000 0.00 0.00 0.00 4.58
21 22 6.885735 TCACACATACTACATTGTTCATCG 57.114 37.500 0.00 0.00 0.00 3.84
22 23 8.424274 TCATCACACATACTACATTGTTCATC 57.576 34.615 0.00 0.00 0.00 2.92
23 24 8.668353 GTTCATCACACATACTACATTGTTCAT 58.332 33.333 0.00 0.00 0.00 2.57
24 25 7.877612 AGTTCATCACACATACTACATTGTTCA 59.122 33.333 0.00 0.00 0.00 3.18
25 26 8.171196 CAGTTCATCACACATACTACATTGTTC 58.829 37.037 0.00 0.00 0.00 3.18
26 27 7.661437 ACAGTTCATCACACATACTACATTGTT 59.339 33.333 0.00 0.00 0.00 2.83
27 28 7.118245 CACAGTTCATCACACATACTACATTGT 59.882 37.037 0.00 0.00 0.00 2.71
28 29 7.118245 ACACAGTTCATCACACATACTACATTG 59.882 37.037 0.00 0.00 0.00 2.82
29 30 7.161404 ACACAGTTCATCACACATACTACATT 58.839 34.615 0.00 0.00 0.00 2.71
30 31 6.701340 ACACAGTTCATCACACATACTACAT 58.299 36.000 0.00 0.00 0.00 2.29
31 32 6.096673 ACACAGTTCATCACACATACTACA 57.903 37.500 0.00 0.00 0.00 2.74
32 33 7.290842 CAAACACAGTTCATCACACATACTAC 58.709 38.462 0.00 0.00 0.00 2.73
33 34 6.073276 GCAAACACAGTTCATCACACATACTA 60.073 38.462 0.00 0.00 0.00 1.82
34 35 5.277974 GCAAACACAGTTCATCACACATACT 60.278 40.000 0.00 0.00 0.00 2.12
35 36 4.911610 GCAAACACAGTTCATCACACATAC 59.088 41.667 0.00 0.00 0.00 2.39
36 37 4.319405 CGCAAACACAGTTCATCACACATA 60.319 41.667 0.00 0.00 0.00 2.29
37 38 3.548616 CGCAAACACAGTTCATCACACAT 60.549 43.478 0.00 0.00 0.00 3.21
38 39 2.223226 CGCAAACACAGTTCATCACACA 60.223 45.455 0.00 0.00 0.00 3.72
39 40 2.375110 CGCAAACACAGTTCATCACAC 58.625 47.619 0.00 0.00 0.00 3.82
40 41 1.268488 GCGCAAACACAGTTCATCACA 60.268 47.619 0.30 0.00 0.00 3.58
41 42 1.268488 TGCGCAAACACAGTTCATCAC 60.268 47.619 8.16 0.00 0.00 3.06
42 43 1.020437 TGCGCAAACACAGTTCATCA 58.980 45.000 8.16 0.00 0.00 3.07
43 44 1.780860 GTTGCGCAAACACAGTTCATC 59.219 47.619 26.87 3.57 38.75 2.92
44 45 1.405105 AGTTGCGCAAACACAGTTCAT 59.595 42.857 26.87 0.00 41.61 2.57
45 46 0.808125 AGTTGCGCAAACACAGTTCA 59.192 45.000 26.87 0.00 41.61 3.18
46 47 1.846175 GAAGTTGCGCAAACACAGTTC 59.154 47.619 26.87 17.01 41.61 3.01
47 48 1.472480 AGAAGTTGCGCAAACACAGTT 59.528 42.857 26.87 11.93 41.61 3.16
48 49 1.064060 GAGAAGTTGCGCAAACACAGT 59.936 47.619 26.87 7.57 41.61 3.55
49 50 1.597937 GGAGAAGTTGCGCAAACACAG 60.598 52.381 26.87 0.00 41.61 3.66
50 51 0.380378 GGAGAAGTTGCGCAAACACA 59.620 50.000 26.87 0.00 41.61 3.72
51 52 0.317854 GGGAGAAGTTGCGCAAACAC 60.318 55.000 26.87 14.11 41.61 3.32
52 53 1.781025 CGGGAGAAGTTGCGCAAACA 61.781 55.000 26.87 0.00 41.61 2.83
53 54 1.082104 CGGGAGAAGTTGCGCAAAC 60.082 57.895 26.87 18.51 39.24 2.93
54 55 1.525077 ACGGGAGAAGTTGCGCAAA 60.525 52.632 26.87 6.26 0.00 3.68
55 56 2.110213 ACGGGAGAAGTTGCGCAA 59.890 55.556 21.02 21.02 0.00 4.85
56 57 2.652382 TTCACGGGAGAAGTTGCGCA 62.652 55.000 5.66 5.66 0.00 6.09
57 58 1.503818 TTTCACGGGAGAAGTTGCGC 61.504 55.000 0.00 0.00 0.00 6.09
58 59 0.941542 TTTTCACGGGAGAAGTTGCG 59.058 50.000 0.00 0.00 0.00 4.85
75 76 7.589574 ACGTGCATAACTTGAAAAACTTTTT 57.410 28.000 0.00 0.00 0.00 1.94
76 77 7.589574 AACGTGCATAACTTGAAAAACTTTT 57.410 28.000 0.00 0.00 0.00 2.27
77 78 7.589574 AAACGTGCATAACTTGAAAAACTTT 57.410 28.000 0.00 0.00 0.00 2.66
78 79 8.185505 TCTAAACGTGCATAACTTGAAAAACTT 58.814 29.630 0.00 0.00 0.00 2.66
79 80 7.699566 TCTAAACGTGCATAACTTGAAAAACT 58.300 30.769 0.00 0.00 0.00 2.66
80 81 7.901874 TCTAAACGTGCATAACTTGAAAAAC 57.098 32.000 0.00 0.00 0.00 2.43
81 82 9.601971 GTATCTAAACGTGCATAACTTGAAAAA 57.398 29.630 0.00 0.00 0.00 1.94
82 83 7.953173 CGTATCTAAACGTGCATAACTTGAAAA 59.047 33.333 0.00 0.00 38.07 2.29
83 84 7.449827 CGTATCTAAACGTGCATAACTTGAAA 58.550 34.615 0.00 0.00 38.07 2.69
84 85 6.454583 GCGTATCTAAACGTGCATAACTTGAA 60.455 38.462 0.00 0.00 44.64 2.69
85 86 5.005012 GCGTATCTAAACGTGCATAACTTGA 59.995 40.000 0.00 0.00 44.64 3.02
86 87 5.188194 GCGTATCTAAACGTGCATAACTTG 58.812 41.667 0.00 0.00 44.64 3.16
87 88 4.027132 CGCGTATCTAAACGTGCATAACTT 60.027 41.667 0.00 0.00 45.12 2.66
88 89 3.484649 CGCGTATCTAAACGTGCATAACT 59.515 43.478 0.00 0.00 45.12 2.24
89 90 3.769058 CGCGTATCTAAACGTGCATAAC 58.231 45.455 0.00 0.00 45.12 1.89
96 97 1.916000 GCAGAACGCGTATCTAAACGT 59.084 47.619 14.46 0.00 44.64 3.99
97 98 2.605849 GCAGAACGCGTATCTAAACG 57.394 50.000 14.46 7.09 45.58 3.60
111 112 2.717580 ACATACGTGTTCGAGCAGAA 57.282 45.000 0.73 0.00 40.62 3.02
112 113 2.717580 AACATACGTGTTCGAGCAGA 57.282 45.000 0.73 0.00 45.14 4.26
121 122 7.540745 GCTTTTATGGATCAAAAACATACGTGT 59.459 33.333 0.00 0.00 41.28 4.49
122 123 7.253288 CGCTTTTATGGATCAAAAACATACGTG 60.253 37.037 0.00 0.00 0.00 4.49
123 124 6.745450 CGCTTTTATGGATCAAAAACATACGT 59.255 34.615 0.00 0.00 0.00 3.57
124 125 6.964370 TCGCTTTTATGGATCAAAAACATACG 59.036 34.615 0.00 0.00 0.00 3.06
125 126 8.856490 ATCGCTTTTATGGATCAAAAACATAC 57.144 30.769 0.00 0.00 0.00 2.39
126 127 9.868277 AAATCGCTTTTATGGATCAAAAACATA 57.132 25.926 0.00 0.00 0.00 2.29
127 128 8.776376 AAATCGCTTTTATGGATCAAAAACAT 57.224 26.923 0.00 0.00 0.00 2.71
128 129 8.600449 AAAATCGCTTTTATGGATCAAAAACA 57.400 26.923 0.00 0.00 32.81 2.83
131 132 8.855279 CGTAAAAATCGCTTTTATGGATCAAAA 58.145 29.630 0.00 0.00 40.68 2.44
132 133 8.388319 CGTAAAAATCGCTTTTATGGATCAAA 57.612 30.769 0.00 0.00 40.68 2.69
133 134 7.962934 CGTAAAAATCGCTTTTATGGATCAA 57.037 32.000 0.00 0.00 40.68 2.57
139 140 4.726704 CGACCCGTAAAAATCGCTTTTATG 59.273 41.667 0.00 6.20 42.52 1.90
140 141 4.392754 ACGACCCGTAAAAATCGCTTTTAT 59.607 37.500 0.00 0.00 40.68 1.40
141 142 3.745458 ACGACCCGTAAAAATCGCTTTTA 59.255 39.130 0.00 0.00 38.73 1.52
142 143 2.549329 ACGACCCGTAAAAATCGCTTTT 59.451 40.909 0.00 0.00 38.73 2.27
143 144 2.145536 ACGACCCGTAAAAATCGCTTT 58.854 42.857 0.00 0.00 38.73 3.51
144 145 1.799544 ACGACCCGTAAAAATCGCTT 58.200 45.000 0.00 0.00 38.73 4.68
145 146 2.652941 TACGACCCGTAAAAATCGCT 57.347 45.000 0.00 0.00 39.44 4.93
146 147 3.931285 AATACGACCCGTAAAAATCGC 57.069 42.857 3.27 0.00 45.39 4.58
147 148 5.002747 GCAAAAATACGACCCGTAAAAATCG 59.997 40.000 3.27 0.00 45.39 3.34
148 149 5.002747 CGCAAAAATACGACCCGTAAAAATC 59.997 40.000 3.27 0.00 45.39 2.17
149 150 4.852650 CGCAAAAATACGACCCGTAAAAAT 59.147 37.500 3.27 0.00 45.39 1.82
150 151 4.217497 CGCAAAAATACGACCCGTAAAAA 58.783 39.130 3.27 0.00 45.39 1.94
151 152 3.364764 CCGCAAAAATACGACCCGTAAAA 60.365 43.478 3.27 0.00 45.39 1.52
152 153 2.159234 CCGCAAAAATACGACCCGTAAA 59.841 45.455 3.27 0.00 45.39 2.01
153 154 1.731160 CCGCAAAAATACGACCCGTAA 59.269 47.619 3.27 0.00 45.39 3.18
154 155 1.357907 CCGCAAAAATACGACCCGTA 58.642 50.000 1.58 1.58 46.28 4.02
155 156 1.300266 CCCGCAAAAATACGACCCGT 61.300 55.000 0.00 0.00 44.35 5.28
156 157 1.426223 CCCGCAAAAATACGACCCG 59.574 57.895 0.00 0.00 0.00 5.28
157 158 0.961857 ACCCCGCAAAAATACGACCC 60.962 55.000 0.00 0.00 0.00 4.46
158 159 0.448990 GACCCCGCAAAAATACGACC 59.551 55.000 0.00 0.00 0.00 4.79
159 160 1.129811 CAGACCCCGCAAAAATACGAC 59.870 52.381 0.00 0.00 0.00 4.34
160 161 1.444836 CAGACCCCGCAAAAATACGA 58.555 50.000 0.00 0.00 0.00 3.43
161 162 0.450184 CCAGACCCCGCAAAAATACG 59.550 55.000 0.00 0.00 0.00 3.06
162 163 1.541379 ACCAGACCCCGCAAAAATAC 58.459 50.000 0.00 0.00 0.00 1.89
163 164 2.572556 TCTACCAGACCCCGCAAAAATA 59.427 45.455 0.00 0.00 0.00 1.40
164 165 1.353022 TCTACCAGACCCCGCAAAAAT 59.647 47.619 0.00 0.00 0.00 1.82
165 166 0.766131 TCTACCAGACCCCGCAAAAA 59.234 50.000 0.00 0.00 0.00 1.94
166 167 0.323629 CTCTACCAGACCCCGCAAAA 59.676 55.000 0.00 0.00 0.00 2.44
167 168 0.834687 ACTCTACCAGACCCCGCAAA 60.835 55.000 0.00 0.00 0.00 3.68
168 169 0.834687 AACTCTACCAGACCCCGCAA 60.835 55.000 0.00 0.00 0.00 4.85
169 170 1.229082 AACTCTACCAGACCCCGCA 60.229 57.895 0.00 0.00 0.00 5.69
170 171 1.218316 CAACTCTACCAGACCCCGC 59.782 63.158 0.00 0.00 0.00 6.13
171 172 1.218316 GCAACTCTACCAGACCCCG 59.782 63.158 0.00 0.00 0.00 5.73
172 173 0.537653 GAGCAACTCTACCAGACCCC 59.462 60.000 0.00 0.00 0.00 4.95
173 174 1.562783 AGAGCAACTCTACCAGACCC 58.437 55.000 0.00 0.00 39.28 4.46
174 175 3.427773 CGTAAGAGCAACTCTACCAGACC 60.428 52.174 0.00 0.00 40.28 3.85
175 176 3.760537 CGTAAGAGCAACTCTACCAGAC 58.239 50.000 0.00 0.00 40.28 3.51
176 177 2.163815 GCGTAAGAGCAACTCTACCAGA 59.836 50.000 0.00 0.00 40.28 3.86
177 178 2.164624 AGCGTAAGAGCAACTCTACCAG 59.835 50.000 0.00 0.00 40.28 4.00
178 179 2.094700 CAGCGTAAGAGCAACTCTACCA 60.095 50.000 0.00 0.00 40.28 3.25
179 180 2.531206 CAGCGTAAGAGCAACTCTACC 58.469 52.381 0.00 0.00 40.28 3.18
180 181 2.094649 ACCAGCGTAAGAGCAACTCTAC 60.095 50.000 0.00 0.00 40.28 2.59
181 182 2.168496 ACCAGCGTAAGAGCAACTCTA 58.832 47.619 0.00 0.00 40.28 2.43
182 183 0.969894 ACCAGCGTAAGAGCAACTCT 59.030 50.000 0.00 0.00 43.37 3.24
183 184 1.797025 AACCAGCGTAAGAGCAACTC 58.203 50.000 0.00 0.00 40.15 3.01
184 185 2.143925 GAAACCAGCGTAAGAGCAACT 58.856 47.619 0.00 0.00 40.15 3.16
185 186 2.143925 AGAAACCAGCGTAAGAGCAAC 58.856 47.619 0.00 0.00 40.15 4.17
186 187 2.543777 AGAAACCAGCGTAAGAGCAA 57.456 45.000 0.00 0.00 40.15 3.91
187 188 3.733988 CGATAGAAACCAGCGTAAGAGCA 60.734 47.826 0.00 0.00 37.84 4.26
188 189 2.789893 CGATAGAAACCAGCGTAAGAGC 59.210 50.000 0.00 0.00 38.01 4.09
189 190 3.791887 CACGATAGAAACCAGCGTAAGAG 59.208 47.826 0.00 0.00 39.41 2.85
190 191 3.766151 CACGATAGAAACCAGCGTAAGA 58.234 45.455 0.00 0.00 39.41 2.10
197 198 4.142816 CCTTCTTTGCACGATAGAAACCAG 60.143 45.833 0.00 0.00 41.38 4.00
208 209 0.040958 GTGCTGACCTTCTTTGCACG 60.041 55.000 0.00 0.00 43.19 5.34
247 248 9.118236 CGAAAATGATCTTGTTTTCCTTTCTAC 57.882 33.333 17.72 0.00 39.81 2.59
260 261 3.469899 TTGGCGACGAAAATGATCTTG 57.530 42.857 0.00 0.00 0.00 3.02
278 279 6.808008 ATGATCCGTATAGGCAATTCTTTG 57.192 37.500 0.00 0.00 40.77 2.77
336 337 1.238625 GGAGTAGGGCGAGAGATCGG 61.239 65.000 0.00 0.00 0.00 4.18
348 349 1.797211 GCGTCCATCGAGGGAGTAGG 61.797 65.000 21.06 10.32 42.86 3.18
388 389 2.949106 CACGCTTTGCCACTGAGG 59.051 61.111 0.00 0.00 41.84 3.86
432 433 0.674895 AGCAAGCGGATGGTTCACTC 60.675 55.000 0.00 0.00 32.39 3.51
503 504 2.614259 CCACACCTCCCTAGCATAGAT 58.386 52.381 0.00 0.00 42.77 1.98
544 545 1.575447 GGATGGAGCCCCTCAGGTTT 61.575 60.000 0.00 0.00 38.26 3.27
625 626 2.315901 GTGTCAAAACCACGCTTATGC 58.684 47.619 0.00 0.00 0.00 3.14
955 962 1.605058 GCACCGTCTTCTCCTGCCTA 61.605 60.000 0.00 0.00 0.00 3.93
956 963 2.948720 GCACCGTCTTCTCCTGCCT 61.949 63.158 0.00 0.00 0.00 4.75
957 964 2.435059 GCACCGTCTTCTCCTGCC 60.435 66.667 0.00 0.00 0.00 4.85
958 965 2.811317 CGCACCGTCTTCTCCTGC 60.811 66.667 0.00 0.00 0.00 4.85
959 966 0.600255 AAACGCACCGTCTTCTCCTG 60.600 55.000 0.00 0.00 39.99 3.86
960 967 0.600255 CAAACGCACCGTCTTCTCCT 60.600 55.000 0.00 0.00 39.99 3.69
961 968 0.878961 ACAAACGCACCGTCTTCTCC 60.879 55.000 0.00 0.00 39.99 3.71
962 969 0.232303 CACAAACGCACCGTCTTCTC 59.768 55.000 0.00 0.00 39.99 2.87
963 970 0.461339 ACACAAACGCACCGTCTTCT 60.461 50.000 0.00 0.00 39.99 2.85
964 971 0.315869 CACACAAACGCACCGTCTTC 60.316 55.000 0.00 0.00 39.99 2.87
965 972 1.711060 CCACACAAACGCACCGTCTT 61.711 55.000 0.00 0.00 39.99 3.01
966 973 2.177580 CCACACAAACGCACCGTCT 61.178 57.895 0.00 0.00 39.99 4.18
967 974 2.326550 CCACACAAACGCACCGTC 59.673 61.111 0.00 0.00 39.99 4.79
968 975 3.883180 GCCACACAAACGCACCGT 61.883 61.111 0.00 0.00 43.97 4.83
969 976 4.954680 CGCCACACAAACGCACCG 62.955 66.667 0.00 0.00 0.00 4.94
974 981 3.855209 CTTCGGCGCCACACAAACG 62.855 63.158 28.98 9.88 0.00 3.60
1020 1027 0.656259 TTCGAGCTACGTGATCTCCG 59.344 55.000 0.00 0.00 43.13 4.63
1027 1046 1.226717 GCCTCCTTCGAGCTACGTG 60.227 63.158 0.00 0.00 43.13 4.49
1062 1083 2.279069 CGGGGAGATCTCGGGGATG 61.279 68.421 16.46 0.00 34.33 3.51
1072 1093 2.519780 GAGTCCGAGCGGGGAGAT 60.520 66.667 9.29 0.00 36.58 2.75
1134 1155 3.630148 CCGATGATCCGCGTGCAC 61.630 66.667 6.82 6.82 0.00 4.57
1224 1260 4.643387 AACCAGGAGCACACGGCC 62.643 66.667 0.00 0.00 46.50 6.13
1225 1261 2.594592 AAACCAGGAGCACACGGC 60.595 61.111 0.00 0.00 45.30 5.68
1226 1262 1.966451 GGAAACCAGGAGCACACGG 60.966 63.158 0.00 0.00 0.00 4.94
1227 1263 2.317609 CGGAAACCAGGAGCACACG 61.318 63.158 0.00 0.00 0.00 4.49
1228 1264 1.070786 TCGGAAACCAGGAGCACAC 59.929 57.895 0.00 0.00 0.00 3.82
1231 1267 2.035237 AACGTCGGAAACCAGGAGCA 62.035 55.000 0.00 0.00 0.00 4.26
1245 1281 1.810030 GTGAGCCCCGATGAACGTC 60.810 63.158 0.00 0.00 40.78 4.34
1250 1286 3.458163 GACCGTGAGCCCCGATGA 61.458 66.667 0.00 0.00 0.00 2.92
1257 1293 0.179108 GATACCTGTGACCGTGAGCC 60.179 60.000 0.00 0.00 0.00 4.70
1282 1318 2.557317 GTCAAAAGACTCCGGTTGACA 58.443 47.619 21.88 0.00 45.87 3.58
1308 1344 2.223971 CGGTGCGTGGTTATCTTATCCT 60.224 50.000 0.00 0.00 0.00 3.24
1314 1350 0.248907 CGATCGGTGCGTGGTTATCT 60.249 55.000 7.38 0.00 0.00 1.98
1315 1351 0.248743 TCGATCGGTGCGTGGTTATC 60.249 55.000 16.41 0.00 0.00 1.75
1316 1352 0.173935 TTCGATCGGTGCGTGGTTAT 59.826 50.000 16.41 0.00 0.00 1.89
1317 1353 0.038435 TTTCGATCGGTGCGTGGTTA 60.038 50.000 16.41 0.00 0.00 2.85
1320 1356 3.081133 CTTTCGATCGGTGCGTGG 58.919 61.111 16.41 0.00 0.00 4.94
1321 1357 1.626654 AAGCTTTCGATCGGTGCGTG 61.627 55.000 16.41 1.54 0.00 5.34
1322 1358 0.949105 AAAGCTTTCGATCGGTGCGT 60.949 50.000 16.41 12.14 0.00 5.24
1444 1547 3.426159 CCATTGACCCGAACGAAAAGATG 60.426 47.826 0.00 0.00 0.00 2.90
1481 1584 2.447443 AGATCACGCAAGAGTCTACCA 58.553 47.619 0.00 0.00 43.62 3.25
1482 1585 3.440228 GAAGATCACGCAAGAGTCTACC 58.560 50.000 0.00 0.00 43.62 3.18
1483 1586 3.102276 CGAAGATCACGCAAGAGTCTAC 58.898 50.000 0.00 0.00 43.62 2.59
1484 1587 2.747989 ACGAAGATCACGCAAGAGTCTA 59.252 45.455 11.20 0.00 43.62 2.59
1485 1588 1.542030 ACGAAGATCACGCAAGAGTCT 59.458 47.619 11.20 0.00 43.62 3.24
1486 1589 1.651138 CACGAAGATCACGCAAGAGTC 59.349 52.381 11.20 0.00 43.62 3.36
1487 1590 1.269723 TCACGAAGATCACGCAAGAGT 59.730 47.619 11.20 0.00 43.62 3.24
1488 1591 1.651138 GTCACGAAGATCACGCAAGAG 59.349 52.381 11.20 0.00 43.62 2.85
1489 1592 1.269723 AGTCACGAAGATCACGCAAGA 59.730 47.619 11.20 5.74 43.62 3.02
1555 1658 1.257750 AAAGGCAAAAGGGGGCGATC 61.258 55.000 0.00 0.00 35.71 3.69
1593 1696 1.078001 GGGTACGGGGTTGGATGTG 60.078 63.158 0.00 0.00 0.00 3.21
1599 1785 3.828694 TTGCACGGGTACGGGGTTG 62.829 63.158 0.00 0.00 45.61 3.77
1600 1786 3.540367 CTTGCACGGGTACGGGGTT 62.540 63.158 0.00 0.00 45.61 4.11
1604 1790 1.736645 CACTCTTGCACGGGTACGG 60.737 63.158 0.00 0.00 46.48 4.02
1624 1810 1.961277 CCAGACCGTGGTTGCACTC 60.961 63.158 0.00 0.00 42.17 3.51
1633 1819 0.676184 ATCGATGGATCCAGACCGTG 59.324 55.000 21.33 6.01 0.00 4.94
1634 1820 0.962489 GATCGATGGATCCAGACCGT 59.038 55.000 21.33 12.90 42.72 4.83
1635 1821 3.802613 GATCGATGGATCCAGACCG 57.197 57.895 21.33 21.21 42.72 4.79
1646 1832 2.138320 CCGAAATCACAGGGATCGATG 58.862 52.381 0.54 0.00 34.28 3.84
1667 1853 1.078143 ACGGCCAGAGGAAGATTGC 60.078 57.895 2.24 0.00 0.00 3.56
1669 1855 1.078143 GCACGGCCAGAGGAAGATT 60.078 57.895 2.24 0.00 0.00 2.40
1764 1955 5.401531 AACATGACACGGATGTAGTAGTT 57.598 39.130 0.00 0.00 39.95 2.24
1771 1962 6.640518 AGACTAATAAACATGACACGGATGT 58.359 36.000 0.00 0.00 43.71 3.06
1796 1987 6.661805 ACTGAAAAACTGAGGGAGTACAAAAA 59.338 34.615 0.00 0.00 33.09 1.94
1797 1988 6.184789 ACTGAAAAACTGAGGGAGTACAAAA 58.815 36.000 0.00 0.00 33.09 2.44
1798 1989 5.751586 ACTGAAAAACTGAGGGAGTACAAA 58.248 37.500 0.00 0.00 33.09 2.83
1799 1990 5.130477 AGACTGAAAAACTGAGGGAGTACAA 59.870 40.000 0.00 0.00 33.09 2.41
1800 1991 4.654262 AGACTGAAAAACTGAGGGAGTACA 59.346 41.667 0.00 0.00 33.09 2.90
1802 1993 5.365605 TGAAGACTGAAAAACTGAGGGAGTA 59.634 40.000 0.00 0.00 33.09 2.59
1805 1996 4.771114 TGAAGACTGAAAAACTGAGGGA 57.229 40.909 0.00 0.00 0.00 4.20
1806 1997 8.792830 TTATATGAAGACTGAAAAACTGAGGG 57.207 34.615 0.00 0.00 0.00 4.30
1812 2003 9.994432 CCACATCTTATATGAAGACTGAAAAAC 57.006 33.333 0.00 0.00 0.00 2.43
1813 2004 9.739276 ACCACATCTTATATGAAGACTGAAAAA 57.261 29.630 0.00 0.00 0.00 1.94
1814 2005 9.739276 AACCACATCTTATATGAAGACTGAAAA 57.261 29.630 0.00 0.00 0.00 2.29
1878 2069 9.853555 TTTCGTATTGCAGATGTTGATATTTTT 57.146 25.926 0.00 0.00 0.00 1.94
1879 2070 9.507280 CTTTCGTATTGCAGATGTTGATATTTT 57.493 29.630 0.00 0.00 0.00 1.82
1880 2071 7.645340 GCTTTCGTATTGCAGATGTTGATATTT 59.355 33.333 0.00 0.00 0.00 1.40
1881 2072 7.012704 AGCTTTCGTATTGCAGATGTTGATATT 59.987 33.333 0.00 0.00 0.00 1.28
1882 2073 6.484643 AGCTTTCGTATTGCAGATGTTGATAT 59.515 34.615 0.00 0.00 0.00 1.63
1883 2074 5.817296 AGCTTTCGTATTGCAGATGTTGATA 59.183 36.000 0.00 0.00 0.00 2.15
1884 2075 4.637534 AGCTTTCGTATTGCAGATGTTGAT 59.362 37.500 0.00 0.00 0.00 2.57
1885 2076 4.002982 AGCTTTCGTATTGCAGATGTTGA 58.997 39.130 0.00 0.00 0.00 3.18
1886 2077 4.346734 AGCTTTCGTATTGCAGATGTTG 57.653 40.909 0.00 0.00 0.00 3.33
1890 2081 7.969536 AACATATAGCTTTCGTATTGCAGAT 57.030 32.000 0.00 0.00 0.00 2.90
1891 2082 8.925700 CATAACATATAGCTTTCGTATTGCAGA 58.074 33.333 0.00 0.00 0.00 4.26
1893 2084 8.825667 TCATAACATATAGCTTTCGTATTGCA 57.174 30.769 0.00 0.00 0.00 4.08
1930 2121 8.909923 TGAAATCAAGATTGTTAGATGCATCAT 58.090 29.630 27.81 12.51 0.00 2.45
1931 2122 8.283699 TGAAATCAAGATTGTTAGATGCATCA 57.716 30.769 27.81 11.65 0.00 3.07
1992 2829 7.637709 AAAGTCAAACTTTGTCAACTTTGAC 57.362 32.000 24.90 24.90 45.83 3.18
2007 2844 9.118236 GCACATAAGATTTAGTCAAAGTCAAAC 57.882 33.333 0.00 0.00 0.00 2.93
2008 2845 8.845227 TGCACATAAGATTTAGTCAAAGTCAAA 58.155 29.630 0.00 0.00 0.00 2.69
2009 2846 8.389779 TGCACATAAGATTTAGTCAAAGTCAA 57.610 30.769 0.00 0.00 0.00 3.18
2010 2847 7.877612 TCTGCACATAAGATTTAGTCAAAGTCA 59.122 33.333 0.00 0.00 0.00 3.41
2011 2848 8.171840 GTCTGCACATAAGATTTAGTCAAAGTC 58.828 37.037 0.00 0.00 0.00 3.01
2012 2849 7.880195 AGTCTGCACATAAGATTTAGTCAAAGT 59.120 33.333 0.00 0.00 0.00 2.66
2013 2850 8.261492 AGTCTGCACATAAGATTTAGTCAAAG 57.739 34.615 0.00 0.00 0.00 2.77
2014 2851 9.719355 TTAGTCTGCACATAAGATTTAGTCAAA 57.281 29.630 0.00 0.00 0.00 2.69
2015 2852 9.719355 TTTAGTCTGCACATAAGATTTAGTCAA 57.281 29.630 0.00 0.00 0.00 3.18
2016 2853 9.719355 TTTTAGTCTGCACATAAGATTTAGTCA 57.281 29.630 0.00 0.00 0.00 3.41
2022 2859 9.899226 GTTTCTTTTTAGTCTGCACATAAGATT 57.101 29.630 0.00 0.00 0.00 2.40
2023 2860 9.066892 TGTTTCTTTTTAGTCTGCACATAAGAT 57.933 29.630 0.00 0.00 0.00 2.40
2024 2861 8.445275 TGTTTCTTTTTAGTCTGCACATAAGA 57.555 30.769 0.00 0.00 0.00 2.10
2025 2862 8.559536 TCTGTTTCTTTTTAGTCTGCACATAAG 58.440 33.333 0.00 0.00 0.00 1.73
2026 2863 8.445275 TCTGTTTCTTTTTAGTCTGCACATAA 57.555 30.769 0.00 0.00 0.00 1.90
2027 2864 7.173218 CCTCTGTTTCTTTTTAGTCTGCACATA 59.827 37.037 0.00 0.00 0.00 2.29
2028 2865 6.016777 CCTCTGTTTCTTTTTAGTCTGCACAT 60.017 38.462 0.00 0.00 0.00 3.21
2029 2866 5.296780 CCTCTGTTTCTTTTTAGTCTGCACA 59.703 40.000 0.00 0.00 0.00 4.57
2030 2867 5.278022 CCCTCTGTTTCTTTTTAGTCTGCAC 60.278 44.000 0.00 0.00 0.00 4.57
2031 2868 4.821805 CCCTCTGTTTCTTTTTAGTCTGCA 59.178 41.667 0.00 0.00 0.00 4.41
2032 2869 5.063880 TCCCTCTGTTTCTTTTTAGTCTGC 58.936 41.667 0.00 0.00 0.00 4.26
2033 2870 6.292150 ACTCCCTCTGTTTCTTTTTAGTCTG 58.708 40.000 0.00 0.00 0.00 3.51
2034 2871 6.502074 ACTCCCTCTGTTTCTTTTTAGTCT 57.498 37.500 0.00 0.00 0.00 3.24
2035 2872 8.850007 ATTACTCCCTCTGTTTCTTTTTAGTC 57.150 34.615 0.00 0.00 0.00 2.59
2036 2873 9.642343 AAATTACTCCCTCTGTTTCTTTTTAGT 57.358 29.630 0.00 0.00 0.00 2.24
2037 2874 9.899226 CAAATTACTCCCTCTGTTTCTTTTTAG 57.101 33.333 0.00 0.00 0.00 1.85
2038 2875 9.416284 ACAAATTACTCCCTCTGTTTCTTTTTA 57.584 29.630 0.00 0.00 0.00 1.52
2039 2876 8.197439 CACAAATTACTCCCTCTGTTTCTTTTT 58.803 33.333 0.00 0.00 0.00 1.94
2040 2877 7.342026 ACACAAATTACTCCCTCTGTTTCTTTT 59.658 33.333 0.00 0.00 0.00 2.27
2041 2878 6.833933 ACACAAATTACTCCCTCTGTTTCTTT 59.166 34.615 0.00 0.00 0.00 2.52
2042 2879 6.365520 ACACAAATTACTCCCTCTGTTTCTT 58.634 36.000 0.00 0.00 0.00 2.52
2043 2880 5.941788 ACACAAATTACTCCCTCTGTTTCT 58.058 37.500 0.00 0.00 0.00 2.52
2044 2881 5.763204 TGACACAAATTACTCCCTCTGTTTC 59.237 40.000 0.00 0.00 0.00 2.78
2045 2882 5.690865 TGACACAAATTACTCCCTCTGTTT 58.309 37.500 0.00 0.00 0.00 2.83
2046 2883 5.304686 TGACACAAATTACTCCCTCTGTT 57.695 39.130 0.00 0.00 0.00 3.16
2047 2884 4.974645 TGACACAAATTACTCCCTCTGT 57.025 40.909 0.00 0.00 0.00 3.41
2048 2885 6.824305 ATTTGACACAAATTACTCCCTCTG 57.176 37.500 4.22 0.00 0.00 3.35
2049 2886 7.839680 AAATTTGACACAAATTACTCCCTCT 57.160 32.000 18.37 3.05 30.38 3.69
2050 2887 8.141268 TCAAAATTTGACACAAATTACTCCCTC 58.859 33.333 18.37 0.00 34.08 4.30
2051 2888 8.017418 TCAAAATTTGACACAAATTACTCCCT 57.983 30.769 18.37 4.17 34.08 4.20
2092 2929 9.823647 TTTGTGGACATGTATTTACAATTTGTT 57.176 25.926 7.45 0.00 39.99 2.83
2093 2930 9.823647 TTTTGTGGACATGTATTTACAATTTGT 57.176 25.926 7.30 7.30 39.99 2.83
2202 3039 7.125053 GGGTCCCCATGAACTTTTGATTATTTA 59.875 37.037 0.00 0.00 35.81 1.40
2203 3040 6.070251 GGGTCCCCATGAACTTTTGATTATTT 60.070 38.462 0.00 0.00 35.81 1.40
2204 3041 5.425217 GGGTCCCCATGAACTTTTGATTATT 59.575 40.000 0.00 0.00 35.81 1.40
2205 3042 4.962362 GGGTCCCCATGAACTTTTGATTAT 59.038 41.667 0.00 0.00 35.81 1.28
2206 3043 4.349365 GGGTCCCCATGAACTTTTGATTA 58.651 43.478 0.00 0.00 35.81 1.75
2207 3044 3.173151 GGGTCCCCATGAACTTTTGATT 58.827 45.455 0.00 0.00 35.81 2.57
2210 3047 1.266178 GGGGTCCCCATGAACTTTTG 58.734 55.000 23.53 0.00 44.65 2.44
2211 3048 3.786495 GGGGTCCCCATGAACTTTT 57.214 52.632 23.53 0.00 44.65 2.27
2223 3060 4.340246 GGTCACGGTTGGGGGTCC 62.340 72.222 0.00 0.00 0.00 4.46
2224 3061 3.562232 TGGTCACGGTTGGGGGTC 61.562 66.667 0.00 0.00 0.00 4.46
2225 3062 3.881104 GTGGTCACGGTTGGGGGT 61.881 66.667 0.00 0.00 0.00 4.95
2227 3064 4.653888 GGGTGGTCACGGTTGGGG 62.654 72.222 0.00 0.00 0.00 4.96
2228 3065 3.423253 TTGGGTGGTCACGGTTGGG 62.423 63.158 0.00 0.00 0.00 4.12
2229 3066 1.896660 CTTGGGTGGTCACGGTTGG 60.897 63.158 0.00 0.00 0.00 3.77
2253 3127 0.595588 CTCACTCACAGTGCGTCTCT 59.404 55.000 0.00 0.00 45.54 3.10
2254 3128 1.006314 GCTCACTCACAGTGCGTCTC 61.006 60.000 0.00 0.00 45.54 3.36
2263 3137 3.541996 TTCTTTCACAGCTCACTCACA 57.458 42.857 0.00 0.00 0.00 3.58
2266 3140 5.456265 GGAAAATTCTTTCACAGCTCACTC 58.544 41.667 0.00 0.00 42.44 3.51
2267 3141 4.279420 GGGAAAATTCTTTCACAGCTCACT 59.721 41.667 0.00 0.00 43.40 3.41
2292 3166 2.953453 ACTTTACTTTTGGTGGTCCCC 58.047 47.619 0.00 0.00 0.00 4.81
2301 3175 9.678941 GAAGAAACAGGGATAACTTTACTTTTG 57.321 33.333 0.00 0.00 0.00 2.44
2316 3190 4.154195 CCACGATGTAAAGAAGAAACAGGG 59.846 45.833 0.00 0.00 0.00 4.45
2319 3193 3.500680 GCCCACGATGTAAAGAAGAAACA 59.499 43.478 0.00 0.00 0.00 2.83
2323 3197 1.404986 CCGCCCACGATGTAAAGAAGA 60.405 52.381 0.00 0.00 43.93 2.87
2324 3198 1.006832 CCGCCCACGATGTAAAGAAG 58.993 55.000 0.00 0.00 43.93 2.85
2347 3221 2.885676 GCATCCTGCGCCACATACG 61.886 63.158 4.18 0.00 31.71 3.06
2366 3240 4.887655 TGCACTAGTAGTAGCTGCTTATCA 59.112 41.667 10.41 0.00 35.76 2.15
2379 3253 6.511416 AGATTTCATAGCTGTGCACTAGTAG 58.489 40.000 19.41 8.02 0.00 2.57
2381 3255 5.105187 TGAGATTTCATAGCTGTGCACTAGT 60.105 40.000 19.41 4.51 0.00 2.57
2383 3257 5.111989 GTGAGATTTCATAGCTGTGCACTA 58.888 41.667 19.41 2.18 35.39 2.74
2385 3259 3.686241 TGTGAGATTTCATAGCTGTGCAC 59.314 43.478 10.75 10.75 35.39 4.57
2387 3261 3.937706 ACTGTGAGATTTCATAGCTGTGC 59.062 43.478 9.56 0.00 43.96 4.57
2388 3262 4.569966 GGACTGTGAGATTTCATAGCTGTG 59.430 45.833 9.56 3.68 43.96 3.66
2389 3263 4.679106 CGGACTGTGAGATTTCATAGCTGT 60.679 45.833 9.56 0.00 43.96 4.40
2390 3264 3.801050 CGGACTGTGAGATTTCATAGCTG 59.199 47.826 9.56 4.90 43.96 4.24
2394 3268 4.649218 TCCATCGGACTGTGAGATTTCATA 59.351 41.667 0.00 0.00 35.39 2.15
2395 3269 3.452264 TCCATCGGACTGTGAGATTTCAT 59.548 43.478 0.00 0.00 35.39 2.57
2396 3270 2.831526 TCCATCGGACTGTGAGATTTCA 59.168 45.455 0.00 0.00 0.00 2.69
2397 3271 3.526931 TCCATCGGACTGTGAGATTTC 57.473 47.619 0.00 0.00 0.00 2.17
2398 3272 3.452264 TGATCCATCGGACTGTGAGATTT 59.548 43.478 0.00 0.00 32.98 2.17
2399 3273 3.033909 TGATCCATCGGACTGTGAGATT 58.966 45.455 0.00 0.00 32.98 2.40
2400 3274 2.363680 GTGATCCATCGGACTGTGAGAT 59.636 50.000 0.00 0.00 32.98 2.75
2401 3275 1.751351 GTGATCCATCGGACTGTGAGA 59.249 52.381 0.00 0.00 32.98 3.27
2423 3297 4.083862 GGGTGCAGAGGGTCCGAC 62.084 72.222 0.00 0.00 0.00 4.79
2435 3309 2.677573 GAAGGCGTTTGTGTGGGTGC 62.678 60.000 0.00 0.00 0.00 5.01
2449 3323 1.629345 GCCATTGCAAAAGCGAAGGC 61.629 55.000 1.71 8.04 37.47 4.35
2453 3327 1.006337 GTGGCCATTGCAAAAGCGA 60.006 52.632 9.72 10.47 40.13 4.93
2455 3329 0.952010 CCTGTGGCCATTGCAAAAGC 60.952 55.000 9.72 14.02 40.13 3.51
2468 3342 1.669115 CGAGACTTGTGGCCTGTGG 60.669 63.158 3.32 0.00 0.00 4.17
2479 3353 2.126424 GAAGGACGCGCGAGACTT 60.126 61.111 39.36 32.22 0.00 3.01
2482 3356 3.812019 GAGGAAGGACGCGCGAGA 61.812 66.667 39.36 0.00 0.00 4.04
2483 3357 3.743091 GAGAGGAAGGACGCGCGAG 62.743 68.421 39.36 10.29 0.00 5.03
2484 3358 3.812019 GAGAGGAAGGACGCGCGA 61.812 66.667 39.36 0.00 0.00 5.87
2485 3359 4.856607 GGAGAGGAAGGACGCGCG 62.857 72.222 30.96 30.96 0.00 6.86
2486 3360 3.418744 GAGGAGAGGAAGGACGCGC 62.419 68.421 5.73 0.00 0.00 6.86
2487 3361 0.464013 TAGAGGAGAGGAAGGACGCG 60.464 60.000 3.53 3.53 0.00 6.01
2488 3362 1.026584 GTAGAGGAGAGGAAGGACGC 58.973 60.000 0.00 0.00 0.00 5.19
2489 3363 1.682740 GGTAGAGGAGAGGAAGGACG 58.317 60.000 0.00 0.00 0.00 4.79
2490 3364 1.411930 GGGGTAGAGGAGAGGAAGGAC 60.412 61.905 0.00 0.00 0.00 3.85
2491 3365 0.935194 GGGGTAGAGGAGAGGAAGGA 59.065 60.000 0.00 0.00 0.00 3.36
2492 3366 0.468400 CGGGGTAGAGGAGAGGAAGG 60.468 65.000 0.00 0.00 0.00 3.46
2493 3367 0.259356 ACGGGGTAGAGGAGAGGAAG 59.741 60.000 0.00 0.00 0.00 3.46
2494 3368 0.033405 CACGGGGTAGAGGAGAGGAA 60.033 60.000 0.00 0.00 0.00 3.36
2495 3369 1.613610 CACGGGGTAGAGGAGAGGA 59.386 63.158 0.00 0.00 0.00 3.71
2597 3475 1.070577 GCTGCTATGTTGCCGTAATCG 60.071 52.381 0.00 0.00 0.00 3.34
2612 3490 1.802960 CGAAGATGTCAACTTGCTGCT 59.197 47.619 0.00 0.00 0.00 4.24
2649 3527 8.880750 CATATAGATAGATCGAACTACCGAACA 58.119 37.037 4.35 0.00 42.22 3.18
2657 3535 7.482169 TTTGGCCATATAGATAGATCGAACT 57.518 36.000 6.09 0.00 0.00 3.01
2691 3569 3.524759 GACGCACTCGCTCGTTCG 61.525 66.667 0.00 0.00 39.22 3.95
2697 3575 2.989881 TTGATCGGACGCACTCGCT 61.990 57.895 0.00 0.00 39.84 4.93
2699 3577 2.158959 GGTTGATCGGACGCACTCG 61.159 63.158 0.00 0.00 42.43 4.18
2701 3579 2.126071 CGGTTGATCGGACGCACT 60.126 61.111 0.00 0.00 0.00 4.40
2709 3587 3.564027 GAAGGCGGCGGTTGATCG 61.564 66.667 9.78 0.00 0.00 3.69
2711 3589 4.796495 GGGAAGGCGGCGGTTGAT 62.796 66.667 9.78 0.00 0.00 2.57
2726 3604 2.887152 AGCTGCTTCTGTTGTTAAAGGG 59.113 45.455 0.00 0.00 0.00 3.95
2774 3652 0.610232 ACAGGAATGCTGACAAGGGC 60.610 55.000 9.20 0.00 0.00 5.19
2799 3677 1.098869 GTCGATCTGCTCTGGTCAGA 58.901 55.000 0.45 0.45 43.79 3.27
2819 3697 1.471287 GCACCGAACATTTAACCTCCC 59.529 52.381 0.00 0.00 0.00 4.30
2843 3728 4.810491 GCTTTTCCGTTATTGTATACCGGA 59.190 41.667 9.46 13.98 45.21 5.14
2844 3729 4.571580 TGCTTTTCCGTTATTGTATACCGG 59.428 41.667 0.00 0.00 39.98 5.28
2845 3730 5.495502 GTGCTTTTCCGTTATTGTATACCG 58.504 41.667 0.00 0.00 0.00 4.02
2846 3731 5.502869 CGGTGCTTTTCCGTTATTGTATACC 60.503 44.000 0.00 0.00 42.62 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.