Multiple sequence alignment - TraesCS5A01G204400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G204400 chr5A 100.000 4126 0 0 1 4126 413844286 413848411 0.000000e+00 7620.0
1 TraesCS5A01G204400 chr5A 84.074 270 32 8 3391 3654 413888469 413888733 2.460000e-62 250.0
2 TraesCS5A01G204400 chr5D 85.496 1310 115 38 2284 3556 320410823 320409552 0.000000e+00 1297.0
3 TraesCS5A01G204400 chr5D 89.026 975 52 20 737 1670 320412488 320411528 0.000000e+00 1157.0
4 TraesCS5A01G204400 chr5D 84.820 639 58 20 13 648 320413245 320412643 1.270000e-169 606.0
5 TraesCS5A01G204400 chr5D 81.687 486 49 13 1665 2125 320411500 320411030 6.520000e-98 368.0
6 TraesCS5A01G204400 chr5D 84.175 297 36 9 3371 3658 320405894 320405600 1.130000e-70 278.0
7 TraesCS5A01G204400 chr5D 94.000 150 2 4 3677 3819 320409407 320409258 1.930000e-53 220.0
8 TraesCS5A01G204400 chr5D 88.043 92 6 4 3682 3770 320405538 320405449 2.030000e-18 104.0
9 TraesCS5A01G204400 chr5D 84.946 93 7 3 2144 2236 320410987 320410902 2.040000e-13 87.9
10 TraesCS5A01G204400 chr5B 89.253 977 43 17 743 1664 371790288 371789319 0.000000e+00 1166.0
11 TraesCS5A01G204400 chr5B 91.680 637 41 9 3047 3678 371787827 371787198 0.000000e+00 872.0
12 TraesCS5A01G204400 chr5B 82.939 803 71 34 2238 3019 371788583 371787826 0.000000e+00 664.0
13 TraesCS5A01G204400 chr5B 87.197 578 42 21 125 697 371790943 371790393 2.710000e-176 628.0
14 TraesCS5A01G204400 chr5B 86.327 373 39 6 1665 2034 371789279 371788916 2.990000e-106 396.0
15 TraesCS5A01G204400 chr5B 84.345 313 40 9 3369 3678 371773893 371773587 8.670000e-77 298.0
16 TraesCS5A01G204400 chr5B 89.404 151 6 3 3679 3819 371787150 371787000 9.110000e-42 182.0
17 TraesCS5A01G204400 chr5B 88.043 92 6 4 3682 3770 371773541 371773452 2.030000e-18 104.0
18 TraesCS5A01G204400 chr2A 98.561 278 4 0 3823 4100 559510 559233 3.710000e-135 492.0
19 TraesCS5A01G204400 chr7D 82.258 124 11 6 3823 3945 146996493 146996606 3.390000e-16 97.1
20 TraesCS5A01G204400 chr7B 81.579 114 10 2 3834 3946 109921273 109921376 2.640000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G204400 chr5A 413844286 413848411 4125 False 7620.000000 7620 100.000000 1 4126 1 chr5A.!!$F1 4125
1 TraesCS5A01G204400 chr5D 320405449 320413245 7796 True 514.737500 1297 86.524125 13 3819 8 chr5D.!!$R1 3806
2 TraesCS5A01G204400 chr5B 371787000 371790943 3943 True 651.333333 1166 87.800000 125 3819 6 chr5B.!!$R2 3694

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
920 1041 0.385751 TCCTCGCTGATCATCGGTTC 59.614 55.0 18.04 0.0 0.00 3.62 F
1706 1926 0.456653 GATCATTTGGCACCACGCAC 60.457 55.0 0.00 0.0 45.17 5.34 F
2902 3318 0.039165 CCTTCCCTTTCACGCAAAGC 60.039 55.0 2.53 0.0 40.40 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1724 1944 0.108207 CTGAGCCTAATGGAGCTGGG 59.892 60.0 0.00 0.0 40.11 4.45 R
2932 3348 0.169009 ATTCTCGGCGCTTTTCTTGC 59.831 50.0 7.64 0.0 0.00 4.01 R
4075 7412 0.243907 CGCCTATGTCCGGGATACTG 59.756 60.0 0.00 0.0 45.15 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.629043 ATCCACGGTACACTGACAGT 58.371 50.000 1.07 1.07 0.00 3.55
30 31 1.665161 CGGTACACTGACAGTTCGACC 60.665 57.143 5.04 12.06 0.00 4.79
35 36 1.200252 CACTGACAGTTCGACCGATCT 59.800 52.381 5.04 0.00 0.00 2.75
37 38 0.446616 TGACAGTTCGACCGATCTCG 59.553 55.000 0.00 0.00 39.44 4.04
56 57 5.717119 TCTCGTACCACCTTACTCAAAATC 58.283 41.667 0.00 0.00 0.00 2.17
83 84 6.305638 GGACGAAATCTTTTGCAGTTTGATAC 59.694 38.462 0.00 0.00 0.00 2.24
92 93 2.012673 GCAGTTTGATACAGGCCTCAG 58.987 52.381 0.00 0.00 0.00 3.35
137 138 8.481641 CACATTGATGTTTGATGTTAACACTTG 58.518 33.333 11.22 1.48 39.39 3.16
140 141 6.804677 TGATGTTTGATGTTAACACTTGCTT 58.195 32.000 11.22 0.00 38.23 3.91
141 142 7.264221 TGATGTTTGATGTTAACACTTGCTTT 58.736 30.769 11.22 0.00 38.23 3.51
142 143 8.409371 TGATGTTTGATGTTAACACTTGCTTTA 58.591 29.630 11.22 0.00 38.23 1.85
161 162 8.703604 TGCTTTATTAGTGTACTGAAAGCTAG 57.296 34.615 24.76 0.00 42.06 3.42
222 224 0.808755 GGCTTGGAAACCATGGTACG 59.191 55.000 20.12 0.60 31.53 3.67
223 225 1.530323 GCTTGGAAACCATGGTACGT 58.470 50.000 20.12 6.58 31.53 3.57
224 226 2.616001 GGCTTGGAAACCATGGTACGTA 60.616 50.000 20.12 2.53 31.53 3.57
225 227 2.417586 GCTTGGAAACCATGGTACGTAC 59.582 50.000 20.12 17.56 31.53 3.67
226 228 2.766345 TGGAAACCATGGTACGTACC 57.234 50.000 33.42 33.42 46.62 3.34
295 297 1.733912 TGACAATCTCAATGCGTGCTC 59.266 47.619 0.00 0.00 0.00 4.26
306 308 4.507756 TCAATGCGTGCTCTTACATCATAC 59.492 41.667 0.00 0.00 0.00 2.39
307 309 3.518634 TGCGTGCTCTTACATCATACA 57.481 42.857 0.00 0.00 0.00 2.29
308 310 4.058721 TGCGTGCTCTTACATCATACAT 57.941 40.909 0.00 0.00 0.00 2.29
309 311 3.803778 TGCGTGCTCTTACATCATACATG 59.196 43.478 0.00 0.00 0.00 3.21
310 312 3.363378 GCGTGCTCTTACATCATACATGC 60.363 47.826 0.00 0.00 0.00 4.06
311 313 3.803778 CGTGCTCTTACATCATACATGCA 59.196 43.478 0.00 0.00 0.00 3.96
312 314 4.084693 CGTGCTCTTACATCATACATGCAG 60.085 45.833 0.00 0.00 0.00 4.41
313 315 3.811497 TGCTCTTACATCATACATGCAGC 59.189 43.478 0.00 0.00 0.00 5.25
314 316 4.063689 GCTCTTACATCATACATGCAGCT 58.936 43.478 0.00 0.00 0.00 4.24
315 317 5.221501 TGCTCTTACATCATACATGCAGCTA 60.222 40.000 0.00 0.00 0.00 3.32
316 318 5.873712 GCTCTTACATCATACATGCAGCTAT 59.126 40.000 0.00 0.00 0.00 2.97
317 319 6.035866 GCTCTTACATCATACATGCAGCTATC 59.964 42.308 0.00 0.00 0.00 2.08
318 320 6.996509 TCTTACATCATACATGCAGCTATCA 58.003 36.000 0.00 0.00 0.00 2.15
319 321 7.444299 TCTTACATCATACATGCAGCTATCAA 58.556 34.615 0.00 0.00 0.00 2.57
320 322 8.098912 TCTTACATCATACATGCAGCTATCAAT 58.901 33.333 0.00 0.00 0.00 2.57
321 323 6.738832 ACATCATACATGCAGCTATCAATC 57.261 37.500 0.00 0.00 0.00 2.67
322 324 6.473758 ACATCATACATGCAGCTATCAATCT 58.526 36.000 0.00 0.00 0.00 2.40
336 338 0.531532 CAATCTCAAGATCGCGCCCT 60.532 55.000 0.00 0.00 32.75 5.19
342 344 1.344438 TCAAGATCGCGCCCTATCAAT 59.656 47.619 0.00 0.00 0.00 2.57
346 348 2.808543 AGATCGCGCCCTATCAATTTTC 59.191 45.455 0.00 0.00 0.00 2.29
366 368 6.421377 TTTCACAATATGACACAATCGAGG 57.579 37.500 0.00 0.00 36.92 4.63
374 376 4.742438 TGACACAATCGAGGTAAAAAGC 57.258 40.909 0.00 0.00 0.00 3.51
389 391 5.747197 GGTAAAAAGCAAGCAGATCATCATG 59.253 40.000 0.00 0.00 0.00 3.07
415 417 1.410517 CGTGGTGGAGCTCATGAGTAT 59.589 52.381 23.38 12.94 0.00 2.12
425 427 5.011533 GGAGCTCATGAGTATTATCCACTGT 59.988 44.000 23.38 0.00 0.00 3.55
426 428 6.095432 AGCTCATGAGTATTATCCACTGTC 57.905 41.667 23.38 2.13 0.00 3.51
429 431 7.452813 AGCTCATGAGTATTATCCACTGTCATA 59.547 37.037 23.38 0.00 0.00 2.15
478 482 1.560004 CGTGAATCAGCGCACACACT 61.560 55.000 11.47 0.00 34.78 3.55
479 483 1.428448 GTGAATCAGCGCACACACTA 58.572 50.000 11.47 0.00 35.19 2.74
490 494 2.725759 CGCACACACTAATCATGCACAC 60.726 50.000 0.00 0.00 36.02 3.82
504 508 0.385974 GCACACTGCGTTGGTGATTC 60.386 55.000 10.46 0.00 38.01 2.52
537 541 7.482654 TCACAGTGTGACATAAAGAAAGAAG 57.517 36.000 22.06 0.00 37.67 2.85
544 548 9.530129 GTGTGACATAAAGAAAGAAGAAATACG 57.470 33.333 0.00 0.00 0.00 3.06
545 549 9.483916 TGTGACATAAAGAAAGAAGAAATACGA 57.516 29.630 0.00 0.00 0.00 3.43
546 550 9.742552 GTGACATAAAGAAAGAAGAAATACGAC 57.257 33.333 0.00 0.00 0.00 4.34
547 551 9.706691 TGACATAAAGAAAGAAGAAATACGACT 57.293 29.630 0.00 0.00 0.00 4.18
560 564 9.931210 GAAGAAATACGACTTGAAGAAGAAAAA 57.069 29.630 0.00 0.00 32.98 1.94
580 584 2.401583 AAGTAGTGCGATCCATGCAA 57.598 45.000 0.00 0.00 45.23 4.08
581 585 1.656652 AGTAGTGCGATCCATGCAAC 58.343 50.000 0.00 0.00 45.23 4.17
620 625 4.437682 AGAGAAAAGTGGTGTGATCCAA 57.562 40.909 0.00 0.00 39.34 3.53
649 689 3.666902 CGTACGGAAAAGTTTCATGCTGG 60.667 47.826 7.57 0.00 38.92 4.85
650 690 1.000274 ACGGAAAAGTTTCATGCTGGC 60.000 47.619 6.15 0.00 38.92 4.85
686 727 6.185852 ACAAAAAGGAATACGGATTTACGG 57.814 37.500 0.00 0.00 38.39 4.02
782 894 3.604875 TTGAGTATTTGACCCCGAGAC 57.395 47.619 0.00 0.00 0.00 3.36
784 896 2.496070 TGAGTATTTGACCCCGAGACAG 59.504 50.000 0.00 0.00 0.00 3.51
808 925 3.429080 GAGCCTCCGAGCAGAGCAG 62.429 68.421 0.00 0.00 34.23 4.24
822 939 3.126831 CAGAGCAGCTTTATAACTCCCG 58.873 50.000 0.00 0.00 0.00 5.14
916 1037 1.372748 GGCTCCTCGCTGATCATCG 60.373 63.158 12.62 12.62 39.13 3.84
917 1038 1.372748 GCTCCTCGCTGATCATCGG 60.373 63.158 18.04 9.27 35.14 4.18
920 1041 0.385751 TCCTCGCTGATCATCGGTTC 59.614 55.000 18.04 0.00 0.00 3.62
972 1095 4.680237 CCTCGCACGGACAAGGCA 62.680 66.667 0.00 0.00 0.00 4.75
973 1096 2.664851 CTCGCACGGACAAGGCAA 60.665 61.111 0.00 0.00 0.00 4.52
977 1100 2.594303 CACGGACAAGGCAAGGCA 60.594 61.111 0.00 0.00 0.00 4.75
980 1103 2.629656 CGGACAAGGCAAGGCAAGG 61.630 63.158 0.00 0.00 0.00 3.61
981 1104 2.278330 GGACAAGGCAAGGCAAGGG 61.278 63.158 0.00 0.00 0.00 3.95
982 1105 1.531602 GACAAGGCAAGGCAAGGGT 60.532 57.895 0.00 0.00 0.00 4.34
983 1106 1.075301 ACAAGGCAAGGCAAGGGTT 60.075 52.632 0.00 0.00 0.00 4.11
1221 1363 1.479709 AGCTCTACTTCCTCGTGCAT 58.520 50.000 0.00 0.00 0.00 3.96
1608 1789 1.360192 GCTGTGCACCAACAAGACC 59.640 57.895 15.69 0.00 0.00 3.85
1630 1811 2.877300 GCCATGAAGAAAGAGGTGAGCA 60.877 50.000 0.00 0.00 0.00 4.26
1673 1861 4.367023 CCGCGACCTTCCGTCCAA 62.367 66.667 8.23 0.00 38.36 3.53
1675 1863 3.119096 GCGACCTTCCGTCCAAGC 61.119 66.667 0.00 0.00 38.36 4.01
1676 1864 2.657237 CGACCTTCCGTCCAAGCT 59.343 61.111 0.00 0.00 38.36 3.74
1681 1901 1.738099 CTTCCGTCCAAGCTCCGTG 60.738 63.158 0.00 0.00 0.00 4.94
1690 1910 0.721718 CAAGCTCCGTGGAAACGATC 59.278 55.000 0.00 0.00 34.64 3.69
1702 1922 2.595386 GAAACGATCATTTGGCACCAC 58.405 47.619 0.00 0.00 0.00 4.16
1705 1925 1.882311 GATCATTTGGCACCACGCA 59.118 52.632 0.00 0.00 45.17 5.24
1706 1926 0.456653 GATCATTTGGCACCACGCAC 60.457 55.000 0.00 0.00 45.17 5.34
1707 1927 2.198906 ATCATTTGGCACCACGCACG 62.199 55.000 0.00 0.00 45.17 5.34
1708 1928 4.341502 ATTTGGCACCACGCACGC 62.342 61.111 0.00 0.00 45.17 5.34
1741 1961 1.453669 CCCCAGCTCCATTAGGCTC 59.546 63.158 0.00 0.00 36.59 4.70
1767 1987 0.676782 CAAGGACGTCCCAATCCCAC 60.677 60.000 30.82 2.55 35.38 4.61
1774 1994 0.958822 GTCCCAATCCCACACACAAC 59.041 55.000 0.00 0.00 0.00 3.32
1775 1995 0.178975 TCCCAATCCCACACACAACC 60.179 55.000 0.00 0.00 0.00 3.77
1820 2040 1.908299 CCTCCCCCAACAAACAGCC 60.908 63.158 0.00 0.00 0.00 4.85
1821 2041 1.152567 CTCCCCCAACAAACAGCCA 60.153 57.895 0.00 0.00 0.00 4.75
1823 2043 2.736531 CCCCAACAAACAGCCAGC 59.263 61.111 0.00 0.00 0.00 4.85
1824 2044 2.336088 CCCAACAAACAGCCAGCG 59.664 61.111 0.00 0.00 0.00 5.18
1825 2045 2.355009 CCAACAAACAGCCAGCGC 60.355 61.111 0.00 0.00 0.00 5.92
1826 2046 2.412525 CAACAAACAGCCAGCGCA 59.587 55.556 11.47 0.00 37.52 6.09
1836 2056 3.876198 CCAGCGCACCGTAATGGC 61.876 66.667 11.47 0.00 43.94 4.40
1845 2065 0.672401 ACCGTAATGGCACGACAAGG 60.672 55.000 0.00 0.00 44.69 3.61
1852 2072 4.077188 GCACGACAAGGCGAGCAC 62.077 66.667 12.74 0.00 45.11 4.40
1892 2112 4.881850 GTGTCCAGATTCCCGTTTTATCAT 59.118 41.667 0.00 0.00 0.00 2.45
1894 2114 5.123227 GTCCAGATTCCCGTTTTATCATCA 58.877 41.667 0.00 0.00 0.00 3.07
1896 2116 4.023707 CCAGATTCCCGTTTTATCATCAGC 60.024 45.833 0.00 0.00 0.00 4.26
1907 2130 1.890552 ATCATCAGCAAGGGAGGAGT 58.109 50.000 0.00 0.00 0.00 3.85
1914 2137 2.093764 CAGCAAGGGAGGAGTAAGAGTG 60.094 54.545 0.00 0.00 0.00 3.51
1918 2141 3.094484 AGGGAGGAGTAAGAGTGTCAG 57.906 52.381 0.00 0.00 0.00 3.51
1937 2161 1.908066 GCAACACCGACGGAATGGAC 61.908 60.000 23.38 1.16 0.00 4.02
1938 2162 1.004200 AACACCGACGGAATGGACC 60.004 57.895 23.38 0.00 0.00 4.46
2065 2344 1.878102 CGTCCTTTCCACCTCCACTTG 60.878 57.143 0.00 0.00 0.00 3.16
2081 2360 1.480545 ACTTGGCTTTGTTGGTTGGTC 59.519 47.619 0.00 0.00 0.00 4.02
2139 2449 2.657143 CGAAGCTTCTCCTACCCTACT 58.343 52.381 23.50 0.00 0.00 2.57
2140 2450 3.818180 CGAAGCTTCTCCTACCCTACTA 58.182 50.000 23.50 0.00 0.00 1.82
2141 2451 3.565063 CGAAGCTTCTCCTACCCTACTAC 59.435 52.174 23.50 0.00 0.00 2.73
2142 2452 3.598693 AGCTTCTCCTACCCTACTACC 57.401 52.381 0.00 0.00 0.00 3.18
2171 2481 1.364171 CTCCGTCCGTCCCATCATC 59.636 63.158 0.00 0.00 0.00 2.92
2172 2482 1.380650 TCCGTCCGTCCCATCATCA 60.381 57.895 0.00 0.00 0.00 3.07
2173 2483 0.759060 TCCGTCCGTCCCATCATCAT 60.759 55.000 0.00 0.00 0.00 2.45
2180 2490 1.141657 CGTCCCATCATCATTCACCCT 59.858 52.381 0.00 0.00 0.00 4.34
2183 2493 2.173356 TCCCATCATCATTCACCCTGAC 59.827 50.000 0.00 0.00 0.00 3.51
2188 2498 2.577563 TCATCATTCACCCTGACACCAT 59.422 45.455 0.00 0.00 0.00 3.55
2260 2639 3.366374 GCCTTCTGCATGGTTGTTAACTC 60.366 47.826 7.22 0.24 40.77 3.01
2278 2657 1.136500 CTCGGCTCCAACCCTAACTAC 59.864 57.143 0.00 0.00 0.00 2.73
2289 2668 5.827267 CCAACCCTAACTACTACTCCTAGAC 59.173 48.000 0.00 0.00 0.00 2.59
2291 2670 7.147408 CCAACCCTAACTACTACTCCTAGACTA 60.147 44.444 0.00 0.00 0.00 2.59
2294 2673 8.018450 ACCCTAACTACTACTCCTAGACTAGAT 58.982 40.741 11.27 0.00 0.00 1.98
2295 2674 8.534496 CCCTAACTACTACTCCTAGACTAGATC 58.466 44.444 11.27 0.00 0.00 2.75
2296 2675 8.246180 CCTAACTACTACTCCTAGACTAGATCG 58.754 44.444 11.27 1.69 0.00 3.69
2297 2676 6.594788 ACTACTACTCCTAGACTAGATCGG 57.405 45.833 11.27 0.00 0.00 4.18
2298 2677 4.895668 ACTACTCCTAGACTAGATCGGG 57.104 50.000 11.27 0.00 0.00 5.14
2339 2718 3.877508 GGTCAAGTCAATTCCGGGATTAG 59.122 47.826 7.92 3.11 0.00 1.73
2340 2719 4.514401 GTCAAGTCAATTCCGGGATTAGT 58.486 43.478 7.92 0.00 0.00 2.24
2341 2720 5.395990 GGTCAAGTCAATTCCGGGATTAGTA 60.396 44.000 7.92 0.00 0.00 1.82
2354 2733 2.290641 GGATTAGTAATTGGCAGCGGTG 59.709 50.000 10.98 10.98 0.00 4.94
2427 2822 2.432628 GGACGTGAAGGTCGCCTG 60.433 66.667 0.00 0.00 37.82 4.85
2449 2844 2.557345 TGCATGTGCGGGAAAGATTCC 61.557 52.381 0.34 0.34 45.83 3.01
2517 2912 2.716864 GCGCTCTAGGTCGGAGTC 59.283 66.667 0.00 0.00 33.73 3.36
2533 2928 1.517257 GTCAGACCGATGCCAGACG 60.517 63.158 0.00 0.00 0.00 4.18
2552 2958 3.703420 ACGGCTCGTGAATGAATAGTAC 58.297 45.455 0.00 0.00 39.18 2.73
2556 2962 3.491267 GCTCGTGAATGAATAGTACAGCC 59.509 47.826 0.00 0.00 0.00 4.85
2561 2967 4.383052 GTGAATGAATAGTACAGCCGATCG 59.617 45.833 8.51 8.51 0.00 3.69
2587 2993 0.795735 ATCTACGTGTCGCGGTTTCG 60.796 55.000 6.13 9.23 46.52 3.46
2639 3045 4.552355 TCTGCAAAAATCATGAGCTTGTG 58.448 39.130 0.09 3.96 0.00 3.33
2661 3067 3.507009 GTCCCGTCCCTCGTCTCG 61.507 72.222 0.00 0.00 37.94 4.04
2675 3081 2.202492 CTCGACGTCTTGGGCTCG 60.202 66.667 14.70 0.00 0.00 5.03
2677 3083 2.805353 CGACGTCTTGGGCTCGTG 60.805 66.667 14.70 0.00 37.92 4.35
2698 3104 1.721926 GCTGAACTTGACGTACTGCTC 59.278 52.381 0.00 0.00 0.00 4.26
2709 3125 2.035066 ACGTACTGCTCGTGGTAGTTTT 59.965 45.455 7.08 0.00 41.08 2.43
2719 3135 2.742053 CGTGGTAGTTTTGTCCTGATGG 59.258 50.000 0.00 0.00 0.00 3.51
2723 3139 1.915141 AGTTTTGTCCTGATGGCCAG 58.085 50.000 13.05 0.00 42.55 4.85
2729 3145 1.344393 TGTCCTGATGGCCAGACCTAT 60.344 52.381 13.05 0.00 45.78 2.57
2740 3156 5.690865 TGGCCAGACCTATTTATTAACCTG 58.309 41.667 0.00 0.00 40.22 4.00
2782 3198 6.081693 CGTAGGTTGTTGGTGTTTAATTAGC 58.918 40.000 0.00 0.00 0.00 3.09
2785 3201 4.561938 GGTTGTTGGTGTTTAATTAGCCCC 60.562 45.833 0.00 0.00 0.00 5.80
2789 3205 1.667212 GGTGTTTAATTAGCCCCGACG 59.333 52.381 0.00 0.00 0.00 5.12
2846 3262 2.489938 TGGTACAGGATCCACAAAGC 57.510 50.000 15.82 6.59 0.00 3.51
2874 3290 6.841443 TCTTCGTAGTACTGTATAGAGTGC 57.159 41.667 12.62 11.12 0.00 4.40
2882 3298 2.159226 ACTGTATAGAGTGCCTCGCAAC 60.159 50.000 0.94 0.00 41.47 4.17
2902 3318 0.039165 CCTTCCCTTTCACGCAAAGC 60.039 55.000 2.53 0.00 40.40 3.51
2926 3342 2.332654 GCGCCCGAATGTCAAACCT 61.333 57.895 0.00 0.00 0.00 3.50
2932 3348 2.607771 CCCGAATGTCAAACCTTTGCTG 60.608 50.000 0.00 0.00 38.05 4.41
2933 3349 2.053627 CGAATGTCAAACCTTTGCTGC 58.946 47.619 0.00 0.00 38.05 5.25
2946 3362 2.802414 GCTGCAAGAAAAGCGCCG 60.802 61.111 2.29 0.00 34.07 6.46
2954 3373 1.363744 AGAAAAGCGCCGAGAATCTG 58.636 50.000 2.29 0.00 0.00 2.90
2959 3378 3.918220 CGCCGAGAATCTGTGCGC 61.918 66.667 0.00 0.00 38.69 6.09
2960 3379 3.918220 GCCGAGAATCTGTGCGCG 61.918 66.667 0.00 0.00 0.00 6.86
2988 3407 0.179029 ATGTTTATTCCGAGGCCCCG 60.179 55.000 0.00 0.00 0.00 5.73
2996 3415 2.895372 CGAGGCCCCGGAAATTCG 60.895 66.667 0.73 3.24 0.00 3.34
3010 3429 6.245724 CCGGAAATTCGTAGTGTAAATTGTC 58.754 40.000 0.00 0.00 0.00 3.18
3012 3431 7.171434 CGGAAATTCGTAGTGTAAATTGTCTC 58.829 38.462 0.00 0.00 0.00 3.36
3013 3432 7.063074 CGGAAATTCGTAGTGTAAATTGTCTCT 59.937 37.037 0.00 0.00 0.00 3.10
3014 3433 8.381387 GGAAATTCGTAGTGTAAATTGTCTCTC 58.619 37.037 0.00 0.00 0.00 3.20
3015 3434 9.141400 GAAATTCGTAGTGTAAATTGTCTCTCT 57.859 33.333 0.00 0.00 0.00 3.10
3016 3435 8.467402 AATTCGTAGTGTAAATTGTCTCTCTG 57.533 34.615 0.00 0.00 0.00 3.35
3017 3436 6.570672 TCGTAGTGTAAATTGTCTCTCTGT 57.429 37.500 0.00 0.00 0.00 3.41
3018 3437 6.379386 TCGTAGTGTAAATTGTCTCTCTGTG 58.621 40.000 0.00 0.00 0.00 3.66
3019 3438 6.016527 TCGTAGTGTAAATTGTCTCTCTGTGT 60.017 38.462 0.00 0.00 0.00 3.72
3029 3448 1.824852 TCTCTCTGTGTGTGTGTGTGT 59.175 47.619 0.00 0.00 0.00 3.72
3030 3449 1.929169 CTCTCTGTGTGTGTGTGTGTG 59.071 52.381 0.00 0.00 0.00 3.82
3047 3466 3.620821 TGTGTGTGTGTGTCAGTGTAATG 59.379 43.478 0.00 0.00 0.00 1.90
3083 3505 4.864247 GTCTTGCTCTTTTTGTTGCAGAAA 59.136 37.500 0.00 0.00 36.75 2.52
3101 3523 2.885644 CGGACGAGGTTCATGGCG 60.886 66.667 0.00 0.00 0.00 5.69
3169 3591 2.105006 GCATTCTTGCCTCTCTGTGA 57.895 50.000 0.00 0.00 43.38 3.58
3242 3664 3.633986 GGAAATGTTGGCTTCCTATCCTG 59.366 47.826 0.00 0.00 38.48 3.86
3285 3707 3.039202 GAACGGTGCCCATGAAGCG 62.039 63.158 11.38 11.38 42.67 4.68
3299 3721 1.068472 TGAAGCGACGACCTTTCTCTC 60.068 52.381 0.00 0.00 0.00 3.20
3338 3760 9.526713 CCTCTTATATATTGTAGCACTAGCATG 57.473 37.037 0.00 0.00 45.49 4.06
3387 3809 2.611225 ATCACTGTGCTTAGCTAGGC 57.389 50.000 20.24 20.24 0.00 3.93
3416 3838 7.934665 TGTAAATATTCCCGCTGCTTAATCTAA 59.065 33.333 0.00 0.00 0.00 2.10
3420 3842 3.728845 TCCCGCTGCTTAATCTAATGAC 58.271 45.455 0.00 0.00 0.00 3.06
3421 3843 3.388024 TCCCGCTGCTTAATCTAATGACT 59.612 43.478 0.00 0.00 0.00 3.41
3474 3902 0.040958 CCTCGCTCTGTGTTTTGTGC 60.041 55.000 0.00 0.00 0.00 4.57
3488 3916 1.754380 TTGTGCCTGTCGCTACCACT 61.754 55.000 0.00 0.00 38.78 4.00
3489 3917 1.738099 GTGCCTGTCGCTACCACTG 60.738 63.158 0.00 0.00 38.78 3.66
3559 3995 3.204827 TCCGCCGCCTACGACTAC 61.205 66.667 0.00 0.00 43.93 2.73
3653 4093 0.249699 TCGTCGCCTCTGCTTTTTGA 60.250 50.000 0.00 0.00 34.43 2.69
3654 4094 0.164647 CGTCGCCTCTGCTTTTTGAG 59.835 55.000 0.00 0.00 34.43 3.02
3667 4107 0.796312 TTTTGAGCGACGATCTTGCC 59.204 50.000 14.91 0.00 0.00 4.52
3730 4220 6.024049 GCTTTGTCTGTGTACTTAATCATGC 58.976 40.000 0.00 0.00 0.00 4.06
3819 4319 7.384115 CAGGGACGTACGTTCATGATTATTATT 59.616 37.037 32.06 0.00 37.58 1.40
3821 4321 9.362539 GGGACGTACGTTCATGATTATTATTAT 57.637 33.333 27.14 0.00 0.00 1.28
3824 4324 9.146984 ACGTACGTTCATGATTATTATTATGGG 57.853 33.333 16.72 0.00 30.76 4.00
3825 4325 9.361315 CGTACGTTCATGATTATTATTATGGGA 57.639 33.333 7.22 0.00 30.76 4.37
3861 4361 3.832527 ACCTTGTATTTGTGGAAGCAGT 58.167 40.909 0.00 0.00 0.00 4.40
3862 4362 3.821033 ACCTTGTATTTGTGGAAGCAGTC 59.179 43.478 0.00 0.00 0.00 3.51
3865 4365 4.350368 TGTATTTGTGGAAGCAGTCTGA 57.650 40.909 3.32 0.00 0.00 3.27
3867 4367 3.498774 ATTTGTGGAAGCAGTCTGAGT 57.501 42.857 3.32 0.00 0.00 3.41
3868 4368 3.281727 TTTGTGGAAGCAGTCTGAGTT 57.718 42.857 3.32 0.00 0.00 3.01
3869 4369 3.281727 TTGTGGAAGCAGTCTGAGTTT 57.718 42.857 3.32 0.00 0.00 2.66
3870 4370 4.415881 TTGTGGAAGCAGTCTGAGTTTA 57.584 40.909 3.32 0.00 0.00 2.01
3873 4373 3.498777 GTGGAAGCAGTCTGAGTTTAACC 59.501 47.826 3.32 0.00 0.00 2.85
3874 4374 3.075148 GGAAGCAGTCTGAGTTTAACCC 58.925 50.000 3.32 0.00 0.00 4.11
3875 4375 2.861147 AGCAGTCTGAGTTTAACCCC 57.139 50.000 3.32 0.00 0.00 4.95
3877 4377 1.001633 GCAGTCTGAGTTTAACCCCGA 59.998 52.381 3.32 0.00 0.00 5.14
3878 4378 2.354805 GCAGTCTGAGTTTAACCCCGAT 60.355 50.000 3.32 0.00 0.00 4.18
3879 4379 3.522553 CAGTCTGAGTTTAACCCCGATC 58.477 50.000 0.00 0.00 0.00 3.69
3880 4380 3.195825 CAGTCTGAGTTTAACCCCGATCT 59.804 47.826 0.00 0.00 0.00 2.75
3883 4383 3.700038 TCTGAGTTTAACCCCGATCTCTC 59.300 47.826 0.00 0.00 0.00 3.20
3884 4384 3.437213 TGAGTTTAACCCCGATCTCTCA 58.563 45.455 0.00 0.00 0.00 3.27
3885 4385 3.835978 TGAGTTTAACCCCGATCTCTCAA 59.164 43.478 0.00 0.00 0.00 3.02
3886 4386 4.469945 TGAGTTTAACCCCGATCTCTCAAT 59.530 41.667 0.00 0.00 0.00 2.57
3888 4388 4.127907 GTTTAACCCCGATCTCTCAATCC 58.872 47.826 0.00 0.00 0.00 3.01
3889 4389 1.879575 AACCCCGATCTCTCAATCCA 58.120 50.000 0.00 0.00 0.00 3.41
3890 4390 2.109229 ACCCCGATCTCTCAATCCAT 57.891 50.000 0.00 0.00 0.00 3.41
3891 4391 2.412591 ACCCCGATCTCTCAATCCATT 58.587 47.619 0.00 0.00 0.00 3.16
3892 4392 3.587498 ACCCCGATCTCTCAATCCATTA 58.413 45.455 0.00 0.00 0.00 1.90
3893 4393 3.973973 ACCCCGATCTCTCAATCCATTAA 59.026 43.478 0.00 0.00 0.00 1.40
3896 4396 6.006449 CCCCGATCTCTCAATCCATTAAATT 58.994 40.000 0.00 0.00 0.00 1.82
3898 4398 6.072286 CCCGATCTCTCAATCCATTAAATTGG 60.072 42.308 0.00 0.00 35.32 3.16
3899 4399 6.488006 CCGATCTCTCAATCCATTAAATTGGT 59.512 38.462 0.00 0.00 38.01 3.67
3900 4400 7.661437 CCGATCTCTCAATCCATTAAATTGGTA 59.339 37.037 0.00 0.00 38.01 3.25
3901 4401 8.499162 CGATCTCTCAATCCATTAAATTGGTAC 58.501 37.037 0.00 0.00 38.01 3.34
3903 4403 7.638444 TCTCTCAATCCATTAAATTGGTACCA 58.362 34.615 11.60 11.60 38.01 3.25
3904 4404 8.281531 TCTCTCAATCCATTAAATTGGTACCAT 58.718 33.333 17.17 3.16 38.01 3.55
3905 4405 9.573166 CTCTCAATCCATTAAATTGGTACCATA 57.427 33.333 17.17 7.34 38.01 2.74
3918 4418 8.747538 AATTGGTACCATAAACTTACTGATCC 57.252 34.615 17.17 0.00 0.00 3.36
3920 4420 5.727279 TGGTACCATAAACTTACTGATCCCA 59.273 40.000 11.60 0.00 0.00 4.37
3921 4421 6.126883 TGGTACCATAAACTTACTGATCCCAG 60.127 42.308 11.60 0.00 45.76 4.45
3934 4434 4.455606 CTGATCCCAGTCAATTCTAACCC 58.544 47.826 0.00 0.00 35.70 4.11
3935 4435 3.118408 TGATCCCAGTCAATTCTAACCCG 60.118 47.826 0.00 0.00 0.00 5.28
3936 4436 2.542550 TCCCAGTCAATTCTAACCCGA 58.457 47.619 0.00 0.00 0.00 5.14
3938 4438 3.134081 TCCCAGTCAATTCTAACCCGATC 59.866 47.826 0.00 0.00 0.00 3.69
3939 4439 3.467803 CCAGTCAATTCTAACCCGATCC 58.532 50.000 0.00 0.00 0.00 3.36
3944 7281 4.515567 GTCAATTCTAACCCGATCCCAATC 59.484 45.833 0.00 0.00 0.00 2.67
3954 7291 1.210478 CGATCCCAATCCTGGACTTGT 59.790 52.381 0.00 0.00 46.92 3.16
3955 7292 2.356125 CGATCCCAATCCTGGACTTGTT 60.356 50.000 0.00 0.00 46.92 2.83
3956 7293 3.701664 GATCCCAATCCTGGACTTGTTT 58.298 45.455 0.00 0.00 46.92 2.83
3957 7294 2.875296 TCCCAATCCTGGACTTGTTTG 58.125 47.619 0.00 0.00 46.92 2.93
3959 7296 2.558359 CCCAATCCTGGACTTGTTTGTC 59.442 50.000 0.00 0.00 46.92 3.18
3960 7297 3.221771 CCAATCCTGGACTTGTTTGTCA 58.778 45.455 0.00 0.00 46.92 3.58
3961 7298 3.004734 CCAATCCTGGACTTGTTTGTCAC 59.995 47.826 0.00 0.00 46.92 3.67
3962 7299 3.576078 ATCCTGGACTTGTTTGTCACA 57.424 42.857 0.00 0.00 38.61 3.58
3965 7302 2.364632 CTGGACTTGTTTGTCACACCA 58.635 47.619 0.00 0.00 38.61 4.17
3966 7303 2.355756 CTGGACTTGTTTGTCACACCAG 59.644 50.000 0.00 0.00 38.61 4.00
3967 7304 1.676006 GGACTTGTTTGTCACACCAGG 59.324 52.381 0.00 0.00 38.61 4.45
3968 7305 2.639065 GACTTGTTTGTCACACCAGGA 58.361 47.619 0.00 0.00 33.98 3.86
3969 7306 3.013921 GACTTGTTTGTCACACCAGGAA 58.986 45.455 0.00 0.00 33.98 3.36
3972 7309 3.358111 TGTTTGTCACACCAGGAAAGA 57.642 42.857 0.00 0.00 0.00 2.52
3973 7310 3.691575 TGTTTGTCACACCAGGAAAGAA 58.308 40.909 0.00 0.00 0.00 2.52
3974 7311 4.277476 TGTTTGTCACACCAGGAAAGAAT 58.723 39.130 0.00 0.00 0.00 2.40
3975 7312 5.441500 TGTTTGTCACACCAGGAAAGAATA 58.558 37.500 0.00 0.00 0.00 1.75
3976 7313 5.888724 TGTTTGTCACACCAGGAAAGAATAA 59.111 36.000 0.00 0.00 0.00 1.40
3977 7314 6.549364 TGTTTGTCACACCAGGAAAGAATAAT 59.451 34.615 0.00 0.00 0.00 1.28
3978 7315 7.069331 TGTTTGTCACACCAGGAAAGAATAATT 59.931 33.333 0.00 0.00 0.00 1.40
3979 7316 6.817765 TGTCACACCAGGAAAGAATAATTC 57.182 37.500 0.00 0.00 0.00 2.17
3980 7317 5.710099 TGTCACACCAGGAAAGAATAATTCC 59.290 40.000 0.00 0.00 45.50 3.01
3988 7325 4.524053 GGAAAGAATAATTCCGACTGGGT 58.476 43.478 0.00 0.00 37.22 4.51
3990 7327 5.066117 GGAAAGAATAATTCCGACTGGGTTC 59.934 44.000 0.00 0.00 37.22 3.62
3991 7328 4.837093 AGAATAATTCCGACTGGGTTCA 57.163 40.909 0.00 0.00 37.00 3.18
3992 7329 5.174037 AGAATAATTCCGACTGGGTTCAA 57.826 39.130 0.00 0.00 37.00 2.69
3994 7331 5.590259 AGAATAATTCCGACTGGGTTCAATG 59.410 40.000 0.00 0.00 37.00 2.82
3995 7332 1.463674 ATTCCGACTGGGTTCAATGC 58.536 50.000 0.00 0.00 37.00 3.56
3996 7333 0.400213 TTCCGACTGGGTTCAATGCT 59.600 50.000 0.00 0.00 37.00 3.79
3999 7336 1.238439 CGACTGGGTTCAATGCTTGT 58.762 50.000 0.00 0.00 0.00 3.16
4003 7340 2.158623 ACTGGGTTCAATGCTTGTCTCA 60.159 45.455 0.00 0.00 0.00 3.27
4004 7341 2.227388 CTGGGTTCAATGCTTGTCTCAC 59.773 50.000 0.00 0.00 0.00 3.51
4005 7342 2.158623 TGGGTTCAATGCTTGTCTCACT 60.159 45.455 0.00 0.00 0.00 3.41
4006 7343 3.072330 TGGGTTCAATGCTTGTCTCACTA 59.928 43.478 0.00 0.00 0.00 2.74
4008 7345 4.083271 GGGTTCAATGCTTGTCTCACTAAC 60.083 45.833 0.00 0.00 0.00 2.34
4011 7348 3.748048 TCAATGCTTGTCTCACTAACAGC 59.252 43.478 0.00 0.00 0.00 4.40
4012 7349 1.783284 TGCTTGTCTCACTAACAGCG 58.217 50.000 0.00 0.00 0.00 5.18
4014 7351 0.710567 CTTGTCTCACTAACAGCGCG 59.289 55.000 0.00 0.00 0.00 6.86
4015 7352 0.666274 TTGTCTCACTAACAGCGCGG 60.666 55.000 8.83 5.83 0.00 6.46
4016 7353 1.805945 GTCTCACTAACAGCGCGGG 60.806 63.158 13.26 6.53 0.00 6.13
4017 7354 3.188786 CTCACTAACAGCGCGGGC 61.189 66.667 17.92 17.92 40.37 6.13
4018 7355 4.752879 TCACTAACAGCGCGGGCC 62.753 66.667 22.01 0.00 41.24 5.80
4020 7357 3.072468 ACTAACAGCGCGGGCCTA 61.072 61.111 22.01 9.40 41.24 3.93
4021 7358 2.585247 CTAACAGCGCGGGCCTAC 60.585 66.667 22.01 0.00 41.24 3.18
4022 7359 3.365291 CTAACAGCGCGGGCCTACA 62.365 63.158 22.01 3.53 41.24 2.74
4023 7360 2.644555 CTAACAGCGCGGGCCTACAT 62.645 60.000 22.01 5.98 41.24 2.29
4024 7361 2.916502 TAACAGCGCGGGCCTACATG 62.917 60.000 22.01 14.64 41.24 3.21
4041 7378 6.344500 CCTACATGGCATATACATCTTCTCC 58.656 44.000 0.00 0.00 0.00 3.71
4043 7380 3.319137 TGGCATATACATCTTCTCCGC 57.681 47.619 0.00 0.00 0.00 5.54
4044 7381 2.028112 TGGCATATACATCTTCTCCGCC 60.028 50.000 0.00 0.00 37.52 6.13
4045 7382 2.028112 GGCATATACATCTTCTCCGCCA 60.028 50.000 0.00 0.00 36.99 5.69
4046 7383 3.557054 GGCATATACATCTTCTCCGCCAA 60.557 47.826 0.00 0.00 36.99 4.52
4048 7385 4.331168 GCATATACATCTTCTCCGCCAATC 59.669 45.833 0.00 0.00 0.00 2.67
4049 7386 5.728471 CATATACATCTTCTCCGCCAATCT 58.272 41.667 0.00 0.00 0.00 2.40
4051 7388 2.114616 ACATCTTCTCCGCCAATCTCT 58.885 47.619 0.00 0.00 0.00 3.10
4052 7389 2.158986 ACATCTTCTCCGCCAATCTCTG 60.159 50.000 0.00 0.00 0.00 3.35
4053 7390 1.561643 TCTTCTCCGCCAATCTCTGT 58.438 50.000 0.00 0.00 0.00 3.41
4055 7392 0.537188 TTCTCCGCCAATCTCTGTCC 59.463 55.000 0.00 0.00 0.00 4.02
4056 7393 1.144936 CTCCGCCAATCTCTGTCCC 59.855 63.158 0.00 0.00 0.00 4.46
4058 7395 2.370445 CCGCCAATCTCTGTCCCCT 61.370 63.158 0.00 0.00 0.00 4.79
4059 7396 1.144936 CGCCAATCTCTGTCCCCTC 59.855 63.158 0.00 0.00 0.00 4.30
4060 7397 1.333636 CGCCAATCTCTGTCCCCTCT 61.334 60.000 0.00 0.00 0.00 3.69
4062 7399 1.283321 GCCAATCTCTGTCCCCTCTTT 59.717 52.381 0.00 0.00 0.00 2.52
4064 7401 2.843113 CCAATCTCTGTCCCCTCTTTCT 59.157 50.000 0.00 0.00 0.00 2.52
4065 7402 4.033709 CCAATCTCTGTCCCCTCTTTCTA 58.966 47.826 0.00 0.00 0.00 2.10
4066 7403 4.657969 CCAATCTCTGTCCCCTCTTTCTAT 59.342 45.833 0.00 0.00 0.00 1.98
4067 7404 5.221621 CCAATCTCTGTCCCCTCTTTCTATC 60.222 48.000 0.00 0.00 0.00 2.08
4068 7405 4.890499 TCTCTGTCCCCTCTTTCTATCT 57.110 45.455 0.00 0.00 0.00 1.98
4069 7406 4.798882 TCTCTGTCCCCTCTTTCTATCTC 58.201 47.826 0.00 0.00 0.00 2.75
4070 7407 3.895041 CTCTGTCCCCTCTTTCTATCTCC 59.105 52.174 0.00 0.00 0.00 3.71
4071 7408 3.533907 TCTGTCCCCTCTTTCTATCTCCT 59.466 47.826 0.00 0.00 0.00 3.69
4072 7409 3.895041 CTGTCCCCTCTTTCTATCTCCTC 59.105 52.174 0.00 0.00 0.00 3.71
4073 7410 3.533907 TGTCCCCTCTTTCTATCTCCTCT 59.466 47.826 0.00 0.00 0.00 3.69
4074 7411 4.149598 GTCCCCTCTTTCTATCTCCTCTC 58.850 52.174 0.00 0.00 0.00 3.20
4075 7412 3.141272 TCCCCTCTTTCTATCTCCTCTCC 59.859 52.174 0.00 0.00 0.00 3.71
4076 7413 3.116939 CCCCTCTTTCTATCTCCTCTCCA 60.117 52.174 0.00 0.00 0.00 3.86
4077 7414 4.151883 CCCTCTTTCTATCTCCTCTCCAG 58.848 52.174 0.00 0.00 0.00 3.86
4079 7416 5.163034 CCCTCTTTCTATCTCCTCTCCAGTA 60.163 48.000 0.00 0.00 0.00 2.74
4080 7417 6.468651 CCCTCTTTCTATCTCCTCTCCAGTAT 60.469 46.154 0.00 0.00 0.00 2.12
4081 7418 6.659242 CCTCTTTCTATCTCCTCTCCAGTATC 59.341 46.154 0.00 0.00 0.00 2.24
4082 7419 6.548321 TCTTTCTATCTCCTCTCCAGTATCC 58.452 44.000 0.00 0.00 0.00 2.59
4084 7421 2.595750 ATCTCCTCTCCAGTATCCCG 57.404 55.000 0.00 0.00 0.00 5.14
4085 7422 0.478942 TCTCCTCTCCAGTATCCCGG 59.521 60.000 0.00 0.00 0.00 5.73
4086 7423 0.478942 CTCCTCTCCAGTATCCCGGA 59.521 60.000 0.73 0.00 0.00 5.14
4087 7424 0.185416 TCCTCTCCAGTATCCCGGAC 59.815 60.000 0.73 0.00 0.00 4.79
4088 7425 0.106167 CCTCTCCAGTATCCCGGACA 60.106 60.000 0.73 0.00 0.00 4.02
4091 7428 3.085533 CTCTCCAGTATCCCGGACATAG 58.914 54.545 0.73 0.00 0.00 2.23
4092 7429 2.171840 CTCCAGTATCCCGGACATAGG 58.828 57.143 0.73 0.00 0.00 2.57
4093 7430 0.608640 CCAGTATCCCGGACATAGGC 59.391 60.000 0.73 0.00 0.00 3.93
4094 7431 0.243907 CAGTATCCCGGACATAGGCG 59.756 60.000 0.73 0.00 0.00 5.52
4095 7432 1.080025 GTATCCCGGACATAGGCGC 60.080 63.158 0.73 0.00 0.00 6.53
4096 7433 2.280552 TATCCCGGACATAGGCGCC 61.281 63.158 21.89 21.89 0.00 6.53
4101 7438 4.203076 GGACATAGGCGCCGACGT 62.203 66.667 23.20 16.03 42.83 4.34
4102 7439 2.654404 GACATAGGCGCCGACGTC 60.654 66.667 19.57 19.57 46.74 4.34
4112 7449 4.477975 CCGACGTCTCGCTCACCC 62.478 72.222 14.70 0.00 38.70 4.61
4114 7451 2.126424 GACGTCTCGCTCACCCAC 60.126 66.667 8.70 0.00 0.00 4.61
4115 7452 3.628280 GACGTCTCGCTCACCCACC 62.628 68.421 8.70 0.00 0.00 4.61
4116 7453 4.436998 CGTCTCGCTCACCCACCC 62.437 72.222 0.00 0.00 0.00 4.61
4122 7459 4.083862 GCTCACCCACCCCGACTC 62.084 72.222 0.00 0.00 0.00 3.36
4123 7460 3.391382 CTCACCCACCCCGACTCC 61.391 72.222 0.00 0.00 0.00 3.85
4124 7461 4.242586 TCACCCACCCCGACTCCA 62.243 66.667 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.181464 TGTCAGTGTACCGTGGATTTTGA 60.181 43.478 0.00 0.00 0.00 2.69
1 2 3.135225 TGTCAGTGTACCGTGGATTTTG 58.865 45.455 0.00 0.00 0.00 2.44
3 4 2.367567 ACTGTCAGTGTACCGTGGATTT 59.632 45.455 4.21 0.00 0.00 2.17
5 6 1.629043 ACTGTCAGTGTACCGTGGAT 58.371 50.000 4.21 0.00 0.00 3.41
6 7 1.338973 GAACTGTCAGTGTACCGTGGA 59.661 52.381 6.18 0.00 0.00 4.02
7 8 1.779569 GAACTGTCAGTGTACCGTGG 58.220 55.000 6.18 0.00 0.00 4.94
8 9 1.002142 TCGAACTGTCAGTGTACCGTG 60.002 52.381 6.18 0.00 0.00 4.94
9 10 1.002033 GTCGAACTGTCAGTGTACCGT 60.002 52.381 6.18 0.00 0.00 4.83
10 11 1.665161 GGTCGAACTGTCAGTGTACCG 60.665 57.143 6.18 8.38 0.00 4.02
11 12 1.665161 CGGTCGAACTGTCAGTGTACC 60.665 57.143 6.18 12.85 0.00 3.34
12 13 1.265095 TCGGTCGAACTGTCAGTGTAC 59.735 52.381 6.18 5.27 0.00 2.90
13 14 1.596603 TCGGTCGAACTGTCAGTGTA 58.403 50.000 6.18 0.00 0.00 2.90
14 15 0.959553 ATCGGTCGAACTGTCAGTGT 59.040 50.000 6.18 0.00 0.00 3.55
15 16 1.200252 AGATCGGTCGAACTGTCAGTG 59.800 52.381 6.18 0.00 0.00 3.66
16 17 1.469308 GAGATCGGTCGAACTGTCAGT 59.531 52.381 7.83 0.00 0.00 3.41
17 18 1.530031 CGAGATCGGTCGAACTGTCAG 60.530 57.143 7.83 0.00 42.85 3.51
24 25 0.729116 GTGGTACGAGATCGGTCGAA 59.271 55.000 10.96 0.00 42.85 3.71
30 31 2.941064 TGAGTAAGGTGGTACGAGATCG 59.059 50.000 0.00 0.00 46.33 3.69
35 36 5.475719 CAGATTTTGAGTAAGGTGGTACGA 58.524 41.667 0.00 0.00 0.00 3.43
37 38 5.642491 GTCCAGATTTTGAGTAAGGTGGTAC 59.358 44.000 0.00 0.00 0.00 3.34
56 57 3.904136 ACTGCAAAAGATTTCGTCCAG 57.096 42.857 0.00 0.00 0.00 3.86
83 84 3.003689 CACACAACTAAAACTGAGGCCTG 59.996 47.826 12.00 0.00 0.00 4.85
92 93 3.157932 TGCCAAGCACACAACTAAAAC 57.842 42.857 0.00 0.00 31.71 2.43
137 138 8.705048 ACTAGCTTTCAGTACACTAATAAAGC 57.295 34.615 18.78 18.78 41.11 3.51
140 141 9.856488 CAGAACTAGCTTTCAGTACACTAATAA 57.144 33.333 0.00 0.00 0.00 1.40
141 142 9.021807 ACAGAACTAGCTTTCAGTACACTAATA 57.978 33.333 0.00 0.00 0.00 0.98
142 143 7.897864 ACAGAACTAGCTTTCAGTACACTAAT 58.102 34.615 0.00 0.00 0.00 1.73
161 162 0.784778 CTCGCGGAGTTCAACAGAAC 59.215 55.000 6.13 0.28 41.50 3.01
177 179 4.201783 CCTCGGTTAACCAAATAAAGCTCG 60.202 45.833 24.14 5.87 35.14 5.03
235 237 7.254658 CGCTAAGTTAAGTCAACCAGAAGAAAA 60.255 37.037 0.00 0.00 37.93 2.29
295 297 7.662604 TTGATAGCTGCATGTATGATGTAAG 57.337 36.000 1.02 0.00 0.00 2.34
306 308 5.163943 CGATCTTGAGATTGATAGCTGCATG 60.164 44.000 1.02 0.00 38.01 4.06
307 309 4.930405 CGATCTTGAGATTGATAGCTGCAT 59.070 41.667 1.02 0.00 38.01 3.96
308 310 4.304939 CGATCTTGAGATTGATAGCTGCA 58.695 43.478 1.02 0.00 38.01 4.41
309 311 3.123284 GCGATCTTGAGATTGATAGCTGC 59.877 47.826 11.58 0.00 38.01 5.25
310 312 3.364322 CGCGATCTTGAGATTGATAGCTG 59.636 47.826 0.00 0.00 38.53 4.24
311 313 3.573598 CGCGATCTTGAGATTGATAGCT 58.426 45.455 0.00 0.00 38.53 3.32
312 314 2.091899 GCGCGATCTTGAGATTGATAGC 59.908 50.000 12.10 9.24 38.01 2.97
313 315 2.665537 GGCGCGATCTTGAGATTGATAG 59.334 50.000 12.10 4.21 38.01 2.08
314 316 2.610479 GGGCGCGATCTTGAGATTGATA 60.610 50.000 12.10 0.00 38.01 2.15
315 317 1.506493 GGCGCGATCTTGAGATTGAT 58.494 50.000 12.10 0.00 38.01 2.57
316 318 0.530650 GGGCGCGATCTTGAGATTGA 60.531 55.000 12.10 0.00 38.01 2.57
317 319 0.531532 AGGGCGCGATCTTGAGATTG 60.532 55.000 12.10 4.20 38.64 2.67
318 320 1.040646 TAGGGCGCGATCTTGAGATT 58.959 50.000 12.10 0.00 34.37 2.40
319 321 1.203523 GATAGGGCGCGATCTTGAGAT 59.796 52.381 12.10 0.00 37.51 2.75
320 322 0.598562 GATAGGGCGCGATCTTGAGA 59.401 55.000 12.10 0.00 0.00 3.27
321 323 0.315251 TGATAGGGCGCGATCTTGAG 59.685 55.000 21.31 0.00 0.00 3.02
322 324 0.750249 TTGATAGGGCGCGATCTTGA 59.250 50.000 21.31 7.87 0.00 3.02
342 344 6.429692 ACCTCGATTGTGTCATATTGTGAAAA 59.570 34.615 0.00 0.00 38.90 2.29
346 348 6.902224 TTACCTCGATTGTGTCATATTGTG 57.098 37.500 0.00 0.00 0.00 3.33
366 368 6.558009 TCATGATGATCTGCTTGCTTTTTAC 58.442 36.000 0.00 0.00 0.00 2.01
374 376 2.290916 GGTGCTCATGATGATCTGCTTG 59.709 50.000 0.00 0.00 0.00 4.01
415 417 7.913789 AGTTAGGTGTTTATGACAGTGGATAA 58.086 34.615 0.00 0.00 39.39 1.75
425 427 4.020928 TGAAGGCGAGTTAGGTGTTTATGA 60.021 41.667 0.00 0.00 0.00 2.15
426 428 4.250464 TGAAGGCGAGTTAGGTGTTTATG 58.750 43.478 0.00 0.00 0.00 1.90
429 431 2.922740 TGAAGGCGAGTTAGGTGTTT 57.077 45.000 0.00 0.00 0.00 2.83
459 461 1.154599 GTGTGTGCGCTGATTCACG 60.155 57.895 9.73 4.85 36.06 4.35
460 462 1.428448 TAGTGTGTGCGCTGATTCAC 58.572 50.000 9.73 10.86 36.72 3.18
461 463 2.162319 TTAGTGTGTGCGCTGATTCA 57.838 45.000 9.73 0.00 36.72 2.57
462 464 2.672874 TGATTAGTGTGTGCGCTGATTC 59.327 45.455 9.73 0.00 36.72 2.52
464 466 2.385013 TGATTAGTGTGTGCGCTGAT 57.615 45.000 9.73 0.00 36.72 2.90
465 467 2.001872 CATGATTAGTGTGTGCGCTGA 58.998 47.619 9.73 0.00 36.72 4.26
466 468 1.530441 GCATGATTAGTGTGTGCGCTG 60.530 52.381 9.73 0.00 36.72 5.18
467 469 0.729116 GCATGATTAGTGTGTGCGCT 59.271 50.000 9.73 0.00 39.11 5.92
468 470 0.447406 TGCATGATTAGTGTGTGCGC 59.553 50.000 0.00 0.00 38.58 6.09
469 471 1.464219 TGTGCATGATTAGTGTGTGCG 59.536 47.619 0.00 0.00 38.58 5.34
472 474 2.485426 GCAGTGTGCATGATTAGTGTGT 59.515 45.455 0.00 0.00 44.26 3.72
478 482 1.468127 CCAACGCAGTGTGCATGATTA 59.532 47.619 2.91 0.00 45.00 1.75
479 483 0.241749 CCAACGCAGTGTGCATGATT 59.758 50.000 2.91 0.00 45.00 2.57
490 494 2.066262 AGTAACGAATCACCAACGCAG 58.934 47.619 0.00 0.00 0.00 5.18
504 508 7.806149 TTATGTCACACTGTGAATAGTAACG 57.194 36.000 15.86 0.00 44.49 3.18
560 564 2.401583 TGCATGGATCGCACTACTTT 57.598 45.000 0.00 0.00 33.55 2.66
591 595 9.220767 GATCACACCACTTTTCTCTTTAAGTAT 57.779 33.333 0.00 0.00 33.49 2.12
593 597 6.486993 GGATCACACCACTTTTCTCTTTAAGT 59.513 38.462 0.00 0.00 35.06 2.24
594 598 6.486657 TGGATCACACCACTTTTCTCTTTAAG 59.513 38.462 0.00 0.00 34.77 1.85
595 599 6.361433 TGGATCACACCACTTTTCTCTTTAA 58.639 36.000 0.00 0.00 34.77 1.52
596 600 5.935945 TGGATCACACCACTTTTCTCTTTA 58.064 37.500 0.00 0.00 34.77 1.85
624 629 3.304190 GCATGAAACTTTTCCGTACGGTT 60.304 43.478 32.16 18.84 36.36 4.44
625 630 2.224784 GCATGAAACTTTTCCGTACGGT 59.775 45.455 32.16 12.74 36.36 4.83
626 631 2.482721 AGCATGAAACTTTTCCGTACGG 59.517 45.455 28.66 28.66 36.36 4.02
627 632 3.479006 CAGCATGAAACTTTTCCGTACG 58.521 45.455 8.69 8.69 39.69 3.67
628 633 3.821841 CCAGCATGAAACTTTTCCGTAC 58.178 45.455 0.00 0.00 39.69 3.67
629 634 2.227865 GCCAGCATGAAACTTTTCCGTA 59.772 45.455 0.00 0.00 39.69 4.02
630 635 1.000274 GCCAGCATGAAACTTTTCCGT 60.000 47.619 0.00 0.00 39.69 4.69
631 636 1.000385 TGCCAGCATGAAACTTTTCCG 60.000 47.619 0.00 0.00 39.69 4.30
632 637 2.818130 TGCCAGCATGAAACTTTTCC 57.182 45.000 0.00 0.00 39.69 3.13
633 638 4.370917 TCTTTGCCAGCATGAAACTTTTC 58.629 39.130 0.00 0.00 39.69 2.29
649 689 3.975035 CCTTTTTGTACGCTTCTCTTTGC 59.025 43.478 0.00 0.00 0.00 3.68
650 690 5.418310 TCCTTTTTGTACGCTTCTCTTTG 57.582 39.130 0.00 0.00 0.00 2.77
717 758 7.446013 GGTGTTCCCATGGTCGAATTATATTAA 59.554 37.037 11.73 0.00 0.00 1.40
720 761 5.163141 TGGTGTTCCCATGGTCGAATTATAT 60.163 40.000 11.73 0.00 38.72 0.86
721 762 4.164413 TGGTGTTCCCATGGTCGAATTATA 59.836 41.667 11.73 0.00 38.72 0.98
747 859 1.064685 ACTCAAATGGATCCCCGTTCC 60.065 52.381 9.90 0.00 40.69 3.62
782 894 1.447317 GCTCGGAGGCTCTCTCTCTG 61.447 65.000 15.23 0.00 42.10 3.35
784 896 1.447317 CTGCTCGGAGGCTCTCTCTC 61.447 65.000 15.23 0.00 42.10 3.20
808 925 2.548280 GGAGAGCCGGGAGTTATAAAGC 60.548 54.545 2.18 0.00 0.00 3.51
822 939 1.518302 GAGAGGGAAACGGAGAGCC 59.482 63.158 0.00 0.00 0.00 4.70
877 998 3.654173 GACTGGCGGGGTCGGTTAC 62.654 68.421 0.00 0.00 36.79 2.50
878 999 3.384532 GACTGGCGGGGTCGGTTA 61.385 66.667 0.00 0.00 36.79 2.85
966 1089 1.368579 CAACCCTTGCCTTGCCTTG 59.631 57.895 0.00 0.00 0.00 3.61
967 1090 3.875390 CAACCCTTGCCTTGCCTT 58.125 55.556 0.00 0.00 0.00 4.35
1035 1177 0.736325 CGTCCACCGTCATCACCTTC 60.736 60.000 0.00 0.00 0.00 3.46
1128 1270 3.827898 CGCACCTCCTCCGACTCC 61.828 72.222 0.00 0.00 0.00 3.85
1608 1789 2.005451 CTCACCTCTTTCTTCATGGCG 58.995 52.381 0.00 0.00 0.00 5.69
1659 1847 2.837371 GGAGCTTGGACGGAAGGTCG 62.837 65.000 13.65 0.00 46.81 4.79
1670 1858 3.253955 CGTTTCCACGGAGCTTGG 58.746 61.111 0.00 0.00 43.16 3.61
1681 1901 1.543802 TGGTGCCAAATGATCGTTTCC 59.456 47.619 10.02 9.03 0.00 3.13
1690 1910 2.428902 CGTGCGTGGTGCCAAATG 60.429 61.111 0.00 0.00 45.60 2.32
1724 1944 0.108207 CTGAGCCTAATGGAGCTGGG 59.892 60.000 0.00 0.00 40.11 4.45
1727 1947 1.835693 GGCTGAGCCTAATGGAGCT 59.164 57.895 17.96 0.00 46.69 4.09
1741 1961 2.432628 GGACGTCCTTGTCGGCTG 60.433 66.667 27.64 0.00 39.83 4.85
1767 1987 2.253758 CGAGCTGGTGGGTTGTGTG 61.254 63.158 0.00 0.00 0.00 3.82
1820 2040 3.124270 TGCCATTACGGTGCGCTG 61.124 61.111 9.73 4.06 36.97 5.18
1821 2041 3.124921 GTGCCATTACGGTGCGCT 61.125 61.111 9.73 0.00 36.97 5.92
1823 2043 2.811747 TCGTGCCATTACGGTGCG 60.812 61.111 0.00 0.00 43.85 5.34
1824 2044 1.570347 TTGTCGTGCCATTACGGTGC 61.570 55.000 0.00 0.00 43.85 5.01
1825 2045 0.442310 CTTGTCGTGCCATTACGGTG 59.558 55.000 0.00 0.00 43.85 4.94
1826 2046 0.672401 CCTTGTCGTGCCATTACGGT 60.672 55.000 0.00 0.00 43.85 4.83
1836 2056 3.414700 GGTGCTCGCCTTGTCGTG 61.415 66.667 0.00 0.00 0.00 4.35
1868 2088 1.519408 AAAACGGGAATCTGGACACG 58.481 50.000 0.00 0.00 38.94 4.49
1869 2089 4.258543 TGATAAAACGGGAATCTGGACAC 58.741 43.478 0.00 0.00 0.00 3.67
1892 2112 2.225394 ACTCTTACTCCTCCCTTGCTGA 60.225 50.000 0.00 0.00 0.00 4.26
1894 2114 2.183679 CACTCTTACTCCTCCCTTGCT 58.816 52.381 0.00 0.00 0.00 3.91
1896 2116 3.165875 TGACACTCTTACTCCTCCCTTG 58.834 50.000 0.00 0.00 0.00 3.61
1918 2141 1.669760 TCCATTCCGTCGGTGTTGC 60.670 57.895 11.88 0.00 0.00 4.17
1942 2166 1.929836 CAAAGAAAGATCCTCTCGGCG 59.070 52.381 0.00 0.00 0.00 6.46
1949 2173 4.039609 CCAAACAAGGCAAAGAAAGATCCT 59.960 41.667 0.00 0.00 0.00 3.24
2008 2232 1.073199 ACTCCCCGAACAAGGCAAG 59.927 57.895 0.00 0.00 0.00 4.01
2053 2297 0.468029 ACAAAGCCAAGTGGAGGTGG 60.468 55.000 0.18 0.00 37.39 4.61
2054 2298 1.067516 CAACAAAGCCAAGTGGAGGTG 59.932 52.381 0.18 0.00 37.39 4.00
2065 2344 1.299850 GCGACCAACCAACAAAGCC 60.300 57.895 0.00 0.00 0.00 4.35
2113 2393 3.491652 GGAGAAGCTTCGCCACGC 61.492 66.667 35.77 14.87 45.20 5.34
2119 2399 2.657143 AGTAGGGTAGGAGAAGCTTCG 58.343 52.381 20.43 0.00 0.00 3.79
2137 2447 0.632294 GGAGGAGAGGAGGTGGTAGT 59.368 60.000 0.00 0.00 0.00 2.73
2138 2448 0.466555 CGGAGGAGAGGAGGTGGTAG 60.467 65.000 0.00 0.00 0.00 3.18
2139 2449 1.212934 ACGGAGGAGAGGAGGTGGTA 61.213 60.000 0.00 0.00 0.00 3.25
2140 2450 2.360980 CGGAGGAGAGGAGGTGGT 59.639 66.667 0.00 0.00 0.00 4.16
2141 2451 1.755008 GACGGAGGAGAGGAGGTGG 60.755 68.421 0.00 0.00 0.00 4.61
2142 2452 1.755008 GGACGGAGGAGAGGAGGTG 60.755 68.421 0.00 0.00 0.00 4.00
2171 2481 2.292267 GCTATGGTGTCAGGGTGAATG 58.708 52.381 0.00 0.00 0.00 2.67
2172 2482 1.915489 TGCTATGGTGTCAGGGTGAAT 59.085 47.619 0.00 0.00 0.00 2.57
2173 2483 1.278985 CTGCTATGGTGTCAGGGTGAA 59.721 52.381 0.00 0.00 0.00 3.18
2180 2490 2.113807 AGATGCTCTGCTATGGTGTCA 58.886 47.619 0.00 0.00 0.00 3.58
2204 2514 4.615815 GGCCGCGAGATGCAGGAT 62.616 66.667 8.23 0.00 46.97 3.24
2253 2632 0.323957 AGGGTTGGAGCCGAGTTAAC 59.676 55.000 0.00 0.00 41.56 2.01
2254 2633 1.941377 TAGGGTTGGAGCCGAGTTAA 58.059 50.000 0.00 0.00 41.56 2.01
2255 2634 1.551883 GTTAGGGTTGGAGCCGAGTTA 59.448 52.381 0.00 0.00 41.56 2.24
2260 2639 1.192428 AGTAGTTAGGGTTGGAGCCG 58.808 55.000 0.00 0.00 41.56 5.52
2278 2657 4.081309 CCTCCCGATCTAGTCTAGGAGTAG 60.081 54.167 7.05 3.71 40.68 2.57
2289 2668 3.435275 TCCATGATTCCTCCCGATCTAG 58.565 50.000 0.00 0.00 0.00 2.43
2291 2670 2.255406 CTCCATGATTCCTCCCGATCT 58.745 52.381 0.00 0.00 0.00 2.75
2294 2673 0.764369 CCCTCCATGATTCCTCCCGA 60.764 60.000 0.00 0.00 0.00 5.14
2295 2674 1.757306 CCCTCCATGATTCCTCCCG 59.243 63.158 0.00 0.00 0.00 5.14
2296 2675 1.458045 GCCCTCCATGATTCCTCCC 59.542 63.158 0.00 0.00 0.00 4.30
2297 2676 1.355718 TGGCCCTCCATGATTCCTCC 61.356 60.000 0.00 0.00 37.47 4.30
2298 2677 0.110104 CTGGCCCTCCATGATTCCTC 59.890 60.000 0.00 0.00 42.51 3.71
2339 2718 1.677633 ACCCACCGCTGCCAATTAC 60.678 57.895 0.00 0.00 0.00 1.89
2340 2719 1.677300 CACCCACCGCTGCCAATTA 60.677 57.895 0.00 0.00 0.00 1.40
2341 2720 2.990967 CACCCACCGCTGCCAATT 60.991 61.111 0.00 0.00 0.00 2.32
2354 2733 0.459759 GCTAGCTAACCACGTCACCC 60.460 60.000 7.70 0.00 0.00 4.61
2425 2820 2.203972 CTTTCCCGCACATGCACCAG 62.204 60.000 4.49 0.00 42.21 4.00
2427 2822 1.315257 ATCTTTCCCGCACATGCACC 61.315 55.000 4.49 0.00 42.21 5.01
2449 2844 1.201647 CACAGTACCACTCTGTACCCG 59.798 57.143 0.00 0.00 43.14 5.28
2501 2896 0.462225 TCTGACTCCGACCTAGAGCG 60.462 60.000 0.00 0.00 34.56 5.03
2517 2912 2.202797 CCGTCTGGCATCGGTCTG 60.203 66.667 18.66 0.00 41.58 3.51
2527 2922 0.389817 TTCATTCACGAGCCGTCTGG 60.390 55.000 0.00 0.00 38.32 3.86
2533 2928 3.491267 GCTGTACTATTCATTCACGAGCC 59.509 47.826 0.00 0.00 0.00 4.70
2535 2930 3.731216 CGGCTGTACTATTCATTCACGAG 59.269 47.826 0.00 0.00 0.00 4.18
2539 2934 4.546570 CGATCGGCTGTACTATTCATTCA 58.453 43.478 7.38 0.00 0.00 2.57
2540 2935 3.921021 CCGATCGGCTGTACTATTCATTC 59.079 47.826 23.37 0.00 0.00 2.67
2541 2936 3.572682 TCCGATCGGCTGTACTATTCATT 59.427 43.478 29.62 0.00 34.68 2.57
2542 2937 3.154710 TCCGATCGGCTGTACTATTCAT 58.845 45.455 29.62 0.00 34.68 2.57
2552 2958 2.160822 AGATTGATTCCGATCGGCTG 57.839 50.000 29.62 6.38 38.07 4.85
2556 2962 3.629058 ACACGTAGATTGATTCCGATCG 58.371 45.455 8.51 8.51 38.07 3.69
2561 2967 1.517276 CGCGACACGTAGATTGATTCC 59.483 52.381 0.00 0.00 36.87 3.01
2587 2993 1.429463 CGGAAGCAGACACCTACAAC 58.571 55.000 0.00 0.00 0.00 3.32
2639 3045 2.047560 CGAGGGACGGGACAAACC 60.048 66.667 0.00 0.00 38.46 3.27
2661 3067 2.432628 CCACGAGCCCAAGACGTC 60.433 66.667 7.70 7.70 38.18 4.34
2675 3081 1.792949 CAGTACGTCAAGTTCAGCCAC 59.207 52.381 0.00 0.00 0.00 5.01
2677 3083 0.790814 GCAGTACGTCAAGTTCAGCC 59.209 55.000 0.00 0.00 28.92 4.85
2698 3104 2.742053 CCATCAGGACAAAACTACCACG 59.258 50.000 0.00 0.00 36.89 4.94
2719 3135 8.919777 ATTACAGGTTAATAAATAGGTCTGGC 57.080 34.615 0.00 0.00 0.00 4.85
2729 3145 7.375808 CGTACGCGACTATTACAGGTTAATAAA 59.624 37.037 15.93 0.00 41.33 1.40
2769 3185 1.667212 CGTCGGGGCTAATTAAACACC 59.333 52.381 0.00 0.00 0.00 4.16
2782 3198 0.321298 AATCAACCACTTCGTCGGGG 60.321 55.000 0.00 0.00 0.00 5.73
2795 3211 0.935196 GATGACCGGCGGTAATCAAC 59.065 55.000 39.43 25.54 41.93 3.18
2803 3219 3.124921 AAAAGCGATGACCGGCGG 61.125 61.111 27.06 27.06 39.04 6.13
2874 3290 0.960861 GAAAGGGAAGGGTTGCGAGG 60.961 60.000 0.00 0.00 0.00 4.63
2882 3298 0.598065 CTTTGCGTGAAAGGGAAGGG 59.402 55.000 2.15 0.00 37.93 3.95
2904 3320 4.776322 TGACATTCGGGCGCCCTG 62.776 66.667 41.01 33.54 0.00 4.45
2906 3322 3.059386 TTTGACATTCGGGCGCCC 61.059 61.111 36.69 36.69 0.00 6.13
2907 3323 2.178273 GTTTGACATTCGGGCGCC 59.822 61.111 21.18 21.18 0.00 6.53
2926 3342 0.875474 GGCGCTTTTCTTGCAGCAAA 60.875 50.000 9.65 0.00 35.60 3.68
2932 3348 0.169009 ATTCTCGGCGCTTTTCTTGC 59.831 50.000 7.64 0.00 0.00 4.01
2933 3349 1.734465 AGATTCTCGGCGCTTTTCTTG 59.266 47.619 7.64 0.00 0.00 3.02
2943 3359 3.918220 CGCGCACAGATTCTCGGC 61.918 66.667 8.75 0.00 0.00 5.54
2946 3362 1.660607 TCATTTCGCGCACAGATTCTC 59.339 47.619 8.75 0.00 0.00 2.87
2954 3373 1.685302 AACATGTTCATTTCGCGCAC 58.315 45.000 8.75 0.00 0.00 5.34
2957 3376 4.202158 CGGAATAAACATGTTCATTTCGCG 59.798 41.667 19.69 17.14 0.00 5.87
2959 3378 5.965334 CCTCGGAATAAACATGTTCATTTCG 59.035 40.000 23.90 23.90 31.95 3.46
2960 3379 5.743872 GCCTCGGAATAAACATGTTCATTTC 59.256 40.000 12.39 7.14 0.00 2.17
2988 3407 8.252964 AGAGACAATTTACACTACGAATTTCC 57.747 34.615 0.00 0.00 0.00 3.13
2996 3415 6.924060 ACACACAGAGAGACAATTTACACTAC 59.076 38.462 0.00 0.00 0.00 2.73
3010 3429 1.929169 CACACACACACACACAGAGAG 59.071 52.381 0.00 0.00 0.00 3.20
3012 3431 1.394572 CACACACACACACACACAGAG 59.605 52.381 0.00 0.00 0.00 3.35
3013 3432 1.270571 ACACACACACACACACACAGA 60.271 47.619 0.00 0.00 0.00 3.41
3014 3433 1.136000 CACACACACACACACACACAG 60.136 52.381 0.00 0.00 0.00 3.66
3015 3434 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3016 3435 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3017 3436 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3018 3437 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3019 3438 1.152510 GACACACACACACACACACA 58.847 50.000 0.00 0.00 0.00 3.72
3029 3448 4.765273 ACTTCATTACACTGACACACACA 58.235 39.130 0.00 0.00 0.00 3.72
3030 3449 5.050490 AGACTTCATTACACTGACACACAC 58.950 41.667 0.00 0.00 0.00 3.82
3047 3466 2.920490 GAGCAAGACGATGTGAGACTTC 59.080 50.000 0.00 0.00 0.00 3.01
3083 3505 2.264794 GCCATGAACCTCGTCCGT 59.735 61.111 0.00 0.00 0.00 4.69
3101 3523 1.300233 GATGATCTCGTCCGGCACC 60.300 63.158 0.00 0.00 0.00 5.01
3159 3581 1.139308 CGCAGAGCTCACAGAGAGG 59.861 63.158 17.77 0.00 44.86 3.69
3167 3589 1.654220 GCCAAAAACGCAGAGCTCA 59.346 52.632 17.77 0.00 0.00 4.26
3168 3590 1.441016 CGCCAAAAACGCAGAGCTC 60.441 57.895 5.27 5.27 0.00 4.09
3169 3591 2.639286 CGCCAAAAACGCAGAGCT 59.361 55.556 0.00 0.00 0.00 4.09
3242 3664 3.071580 CAGAATTCGCTGGGGAGAC 57.928 57.895 0.00 0.00 32.26 3.36
3285 3707 0.818938 GGAGGGAGAGAAAGGTCGTC 59.181 60.000 0.00 0.00 0.00 4.20
3299 3721 0.326618 TAAGAGGAAGGCAGGGAGGG 60.327 60.000 0.00 0.00 0.00 4.30
3362 3784 5.293079 CCTAGCTAAGCACAGTGATTTCTTC 59.707 44.000 9.81 0.00 0.00 2.87
3365 3787 3.311048 GCCTAGCTAAGCACAGTGATTTC 59.689 47.826 9.81 2.52 0.00 2.17
3376 3798 2.304751 TTTACACGGCCTAGCTAAGC 57.695 50.000 5.73 5.73 0.00 3.09
3387 3809 1.263217 GCAGCGGGAATATTTACACGG 59.737 52.381 1.52 0.00 33.29 4.94
3416 3838 1.153289 GATGGCCACGCAGAGTCAT 60.153 57.895 8.16 0.00 33.04 3.06
3420 3842 4.457496 ACGGATGGCCACGCAGAG 62.457 66.667 8.16 0.00 0.00 3.35
3421 3843 4.451150 GACGGATGGCCACGCAGA 62.451 66.667 8.16 0.00 0.00 4.26
3474 3902 1.531149 CAAAACAGTGGTAGCGACAGG 59.469 52.381 0.00 0.00 0.00 4.00
3488 3916 1.271163 GGGAGATCACCGGTCAAAACA 60.271 52.381 2.59 0.00 0.00 2.83
3489 3917 1.271163 TGGGAGATCACCGGTCAAAAC 60.271 52.381 2.59 0.00 0.00 2.43
3518 3954 0.943673 TCGTGAAACTACGTCACCGA 59.056 50.000 0.00 0.00 42.00 4.69
3559 3995 2.186903 CTCCCGTTCACATCCCCG 59.813 66.667 0.00 0.00 0.00 5.73
3653 4093 2.501223 TTTCGGGCAAGATCGTCGCT 62.501 55.000 4.43 0.00 0.00 4.93
3654 4094 2.025359 CTTTCGGGCAAGATCGTCGC 62.025 60.000 0.00 0.00 0.00 5.19
3658 4098 1.438651 TTCACTTTCGGGCAAGATCG 58.561 50.000 0.00 0.00 0.00 3.69
3730 4220 1.876714 CGGCGGAACATCTACACGG 60.877 63.158 0.00 0.00 0.00 4.94
3782 4276 0.250166 ACGTCCCTGTTAAGCACACC 60.250 55.000 0.00 0.00 0.00 4.16
3836 4336 5.983540 TGCTTCCACAAATACAAGGTTTTT 58.016 33.333 0.00 0.00 0.00 1.94
3837 4337 5.128663 ACTGCTTCCACAAATACAAGGTTTT 59.871 36.000 0.00 0.00 0.00 2.43
3838 4338 4.649218 ACTGCTTCCACAAATACAAGGTTT 59.351 37.500 0.00 0.00 0.00 3.27
3839 4339 4.215109 ACTGCTTCCACAAATACAAGGTT 58.785 39.130 0.00 0.00 0.00 3.50
3842 4342 4.756642 TCAGACTGCTTCCACAAATACAAG 59.243 41.667 0.00 0.00 0.00 3.16
3843 4343 4.713553 TCAGACTGCTTCCACAAATACAA 58.286 39.130 0.00 0.00 0.00 2.41
3844 4344 4.202357 ACTCAGACTGCTTCCACAAATACA 60.202 41.667 0.00 0.00 0.00 2.29
3845 4345 4.319177 ACTCAGACTGCTTCCACAAATAC 58.681 43.478 0.00 0.00 0.00 1.89
3846 4346 4.623932 ACTCAGACTGCTTCCACAAATA 57.376 40.909 0.00 0.00 0.00 1.40
3848 4348 3.281727 AACTCAGACTGCTTCCACAAA 57.718 42.857 0.00 0.00 0.00 2.83
3850 4350 4.127171 GTTAAACTCAGACTGCTTCCACA 58.873 43.478 0.00 0.00 0.00 4.17
3851 4351 3.498777 GGTTAAACTCAGACTGCTTCCAC 59.501 47.826 0.00 0.00 0.00 4.02
3852 4352 3.496160 GGGTTAAACTCAGACTGCTTCCA 60.496 47.826 0.00 0.00 0.00 3.53
3855 4355 2.550208 CGGGGTTAAACTCAGACTGCTT 60.550 50.000 0.00 0.00 0.00 3.91
3856 4356 1.002087 CGGGGTTAAACTCAGACTGCT 59.998 52.381 0.00 0.00 0.00 4.24
3857 4357 1.001633 TCGGGGTTAAACTCAGACTGC 59.998 52.381 0.00 0.00 0.00 4.40
3858 4358 3.195825 AGATCGGGGTTAAACTCAGACTG 59.804 47.826 0.00 0.00 0.00 3.51
3861 4361 3.700038 GAGAGATCGGGGTTAAACTCAGA 59.300 47.826 0.00 0.00 0.00 3.27
3862 4362 3.447586 TGAGAGATCGGGGTTAAACTCAG 59.552 47.826 0.00 0.00 0.00 3.35
3865 4365 4.141688 GGATTGAGAGATCGGGGTTAAACT 60.142 45.833 0.00 0.00 0.00 2.66
3867 4367 3.778075 TGGATTGAGAGATCGGGGTTAAA 59.222 43.478 0.00 0.00 0.00 1.52
3868 4368 3.380393 TGGATTGAGAGATCGGGGTTAA 58.620 45.455 0.00 0.00 0.00 2.01
3869 4369 3.040655 TGGATTGAGAGATCGGGGTTA 57.959 47.619 0.00 0.00 0.00 2.85
3870 4370 1.879575 TGGATTGAGAGATCGGGGTT 58.120 50.000 0.00 0.00 0.00 4.11
3873 4373 6.072286 CCAATTTAATGGATTGAGAGATCGGG 60.072 42.308 0.79 0.00 43.54 5.14
3874 4374 6.488006 ACCAATTTAATGGATTGAGAGATCGG 59.512 38.462 2.02 0.00 43.54 4.18
3875 4375 7.502120 ACCAATTTAATGGATTGAGAGATCG 57.498 36.000 2.02 0.00 43.54 3.69
3877 4377 8.281531 TGGTACCAATTTAATGGATTGAGAGAT 58.718 33.333 13.60 0.00 43.54 2.75
3878 4378 7.638444 TGGTACCAATTTAATGGATTGAGAGA 58.362 34.615 13.60 0.00 43.54 3.10
3879 4379 7.880160 TGGTACCAATTTAATGGATTGAGAG 57.120 36.000 13.60 0.00 43.54 3.20
3880 4380 9.928618 TTATGGTACCAATTTAATGGATTGAGA 57.071 29.630 20.76 0.00 43.54 3.27
3892 4392 9.185680 GGATCAGTAAGTTTATGGTACCAATTT 57.814 33.333 20.76 8.34 0.00 1.82
3893 4393 7.778382 GGGATCAGTAAGTTTATGGTACCAATT 59.222 37.037 20.76 5.88 0.00 2.32
3896 4396 5.727279 TGGGATCAGTAAGTTTATGGTACCA 59.273 40.000 18.99 18.99 0.00 3.25
3913 4413 3.118408 CGGGTTAGAATTGACTGGGATCA 60.118 47.826 0.00 0.00 0.00 2.92
3914 4414 3.134081 TCGGGTTAGAATTGACTGGGATC 59.866 47.826 0.00 0.00 0.00 3.36
3915 4415 3.112263 TCGGGTTAGAATTGACTGGGAT 58.888 45.455 0.00 0.00 0.00 3.85
3916 4416 2.542550 TCGGGTTAGAATTGACTGGGA 58.457 47.619 0.00 0.00 0.00 4.37
3918 4418 3.467803 GGATCGGGTTAGAATTGACTGG 58.532 50.000 0.00 0.00 0.00 4.00
3920 4420 3.112263 TGGGATCGGGTTAGAATTGACT 58.888 45.455 0.00 0.00 0.00 3.41
3921 4421 3.553828 TGGGATCGGGTTAGAATTGAC 57.446 47.619 0.00 0.00 0.00 3.18
3922 4422 4.445735 GGATTGGGATCGGGTTAGAATTGA 60.446 45.833 0.00 0.00 32.84 2.57
3923 4423 3.821033 GGATTGGGATCGGGTTAGAATTG 59.179 47.826 0.00 0.00 32.84 2.32
3924 4424 3.722101 AGGATTGGGATCGGGTTAGAATT 59.278 43.478 0.00 0.00 32.84 2.17
3925 4425 3.073062 CAGGATTGGGATCGGGTTAGAAT 59.927 47.826 0.00 0.00 32.84 2.40
3926 4426 2.438021 CAGGATTGGGATCGGGTTAGAA 59.562 50.000 0.00 0.00 32.84 2.10
3928 4428 1.072331 CCAGGATTGGGATCGGGTTAG 59.928 57.143 0.00 0.00 41.05 2.34
3930 4430 0.623324 TCCAGGATTGGGATCGGGTT 60.623 55.000 0.00 0.00 45.10 4.11
3931 4431 1.004230 TCCAGGATTGGGATCGGGT 59.996 57.895 0.00 0.00 45.10 5.28
3932 4432 1.056700 AGTCCAGGATTGGGATCGGG 61.057 60.000 0.00 0.00 45.10 5.14
3933 4433 0.839946 AAGTCCAGGATTGGGATCGG 59.160 55.000 0.00 0.00 45.10 4.18
3934 4434 1.210478 ACAAGTCCAGGATTGGGATCG 59.790 52.381 13.24 0.00 45.10 3.69
3935 4435 3.372440 AACAAGTCCAGGATTGGGATC 57.628 47.619 13.24 0.00 45.10 3.36
3936 4436 3.181418 ACAAACAAGTCCAGGATTGGGAT 60.181 43.478 13.24 1.38 45.10 3.85
3938 4438 2.558359 GACAAACAAGTCCAGGATTGGG 59.442 50.000 13.24 0.96 45.10 4.12
3939 4439 3.004734 GTGACAAACAAGTCCAGGATTGG 59.995 47.826 13.24 1.37 46.49 3.16
3944 7281 1.676006 GGTGTGACAAACAAGTCCAGG 59.324 52.381 0.00 0.00 41.57 4.45
3954 7291 7.255801 GGAATTATTCTTTCCTGGTGTGACAAA 60.256 37.037 4.87 0.00 39.67 2.83
3955 7292 6.208599 GGAATTATTCTTTCCTGGTGTGACAA 59.791 38.462 4.87 0.00 39.67 3.18
3956 7293 5.710099 GGAATTATTCTTTCCTGGTGTGACA 59.290 40.000 4.87 0.00 39.67 3.58
3957 7294 5.163754 CGGAATTATTCTTTCCTGGTGTGAC 60.164 44.000 4.87 0.00 40.46 3.67
3959 7296 4.941263 TCGGAATTATTCTTTCCTGGTGTG 59.059 41.667 4.87 0.00 40.46 3.82
3960 7297 4.941873 GTCGGAATTATTCTTTCCTGGTGT 59.058 41.667 4.87 0.00 40.46 4.16
3961 7298 5.065218 CAGTCGGAATTATTCTTTCCTGGTG 59.935 44.000 4.87 0.00 40.46 4.17
3962 7299 5.186198 CAGTCGGAATTATTCTTTCCTGGT 58.814 41.667 4.87 0.00 40.46 4.00
3965 7302 4.227527 ACCCAGTCGGAATTATTCTTTCCT 59.772 41.667 4.87 0.00 40.46 3.36
3966 7303 4.524053 ACCCAGTCGGAATTATTCTTTCC 58.476 43.478 4.87 0.00 39.44 3.13
3967 7304 5.646360 TGAACCCAGTCGGAATTATTCTTTC 59.354 40.000 4.87 0.00 34.64 2.62
3968 7305 5.566469 TGAACCCAGTCGGAATTATTCTTT 58.434 37.500 4.87 0.00 34.64 2.52
3969 7306 5.174037 TGAACCCAGTCGGAATTATTCTT 57.826 39.130 4.87 0.00 34.64 2.52
3972 7309 4.097892 GCATTGAACCCAGTCGGAATTATT 59.902 41.667 0.00 0.00 34.64 1.40
3973 7310 3.632145 GCATTGAACCCAGTCGGAATTAT 59.368 43.478 0.00 0.00 34.64 1.28
3974 7311 3.013921 GCATTGAACCCAGTCGGAATTA 58.986 45.455 0.00 0.00 34.64 1.40
3975 7312 1.818674 GCATTGAACCCAGTCGGAATT 59.181 47.619 0.00 0.00 34.64 2.17
3976 7313 1.004745 AGCATTGAACCCAGTCGGAAT 59.995 47.619 0.00 0.00 34.64 3.01
3977 7314 0.400213 AGCATTGAACCCAGTCGGAA 59.600 50.000 0.00 0.00 34.64 4.30
3978 7315 0.400213 AAGCATTGAACCCAGTCGGA 59.600 50.000 0.00 0.00 34.64 4.55
3979 7316 2.946947 AAGCATTGAACCCAGTCGG 58.053 52.632 0.00 0.00 37.81 4.79
3991 7328 2.738846 CGCTGTTAGTGAGACAAGCATT 59.261 45.455 0.00 0.00 0.00 3.56
3992 7329 2.341257 CGCTGTTAGTGAGACAAGCAT 58.659 47.619 0.00 0.00 0.00 3.79
3994 7331 0.440371 GCGCTGTTAGTGAGACAAGC 59.560 55.000 0.00 0.00 0.00 4.01
3995 7332 0.710567 CGCGCTGTTAGTGAGACAAG 59.289 55.000 5.56 0.00 0.00 3.16
3996 7333 0.666274 CCGCGCTGTTAGTGAGACAA 60.666 55.000 5.56 0.00 0.00 3.18
3999 7336 2.571757 CCCGCGCTGTTAGTGAGA 59.428 61.111 5.56 0.00 0.00 3.27
4003 7340 3.072468 TAGGCCCGCGCTGTTAGT 61.072 61.111 5.56 0.00 34.44 2.24
4004 7341 2.585247 GTAGGCCCGCGCTGTTAG 60.585 66.667 5.56 0.00 34.44 2.34
4005 7342 2.727392 ATGTAGGCCCGCGCTGTTA 61.727 57.895 5.56 0.00 34.44 2.41
4006 7343 4.096003 ATGTAGGCCCGCGCTGTT 62.096 61.111 5.56 0.00 34.44 3.16
4017 7354 6.344500 GGAGAAGATGTATATGCCATGTAGG 58.656 44.000 0.00 0.00 41.84 3.18
4018 7355 6.038985 CGGAGAAGATGTATATGCCATGTAG 58.961 44.000 0.00 0.00 0.00 2.74
4020 7357 4.825422 CGGAGAAGATGTATATGCCATGT 58.175 43.478 0.00 0.00 0.00 3.21
4021 7358 3.620374 GCGGAGAAGATGTATATGCCATG 59.380 47.826 0.00 0.00 0.00 3.66
4022 7359 3.369892 GGCGGAGAAGATGTATATGCCAT 60.370 47.826 0.00 0.00 39.70 4.40
4023 7360 2.028112 GGCGGAGAAGATGTATATGCCA 60.028 50.000 0.00 0.00 39.70 4.92
4024 7361 2.028112 TGGCGGAGAAGATGTATATGCC 60.028 50.000 0.00 0.00 40.33 4.40
4025 7362 3.319137 TGGCGGAGAAGATGTATATGC 57.681 47.619 0.00 0.00 0.00 3.14
4026 7363 5.728471 AGATTGGCGGAGAAGATGTATATG 58.272 41.667 0.00 0.00 0.00 1.78
4027 7364 5.719085 AGAGATTGGCGGAGAAGATGTATAT 59.281 40.000 0.00 0.00 0.00 0.86
4029 7366 3.900601 AGAGATTGGCGGAGAAGATGTAT 59.099 43.478 0.00 0.00 0.00 2.29
4031 7368 2.114616 AGAGATTGGCGGAGAAGATGT 58.885 47.619 0.00 0.00 0.00 3.06
4032 7369 2.158986 ACAGAGATTGGCGGAGAAGATG 60.159 50.000 0.00 0.00 0.00 2.90
4033 7370 2.102252 GACAGAGATTGGCGGAGAAGAT 59.898 50.000 0.00 0.00 0.00 2.40
4035 7372 1.472376 GGACAGAGATTGGCGGAGAAG 60.472 57.143 0.00 0.00 34.72 2.85
4036 7373 0.537188 GGACAGAGATTGGCGGAGAA 59.463 55.000 0.00 0.00 34.72 2.87
4037 7374 1.330655 GGGACAGAGATTGGCGGAGA 61.331 60.000 0.00 0.00 34.72 3.71
4038 7375 1.144936 GGGACAGAGATTGGCGGAG 59.855 63.158 0.00 0.00 34.72 4.63
4039 7376 2.367202 GGGGACAGAGATTGGCGGA 61.367 63.158 0.00 0.00 34.72 5.54
4040 7377 2.190578 GGGGACAGAGATTGGCGG 59.809 66.667 0.00 0.00 34.72 6.13
4041 7378 1.144936 GAGGGGACAGAGATTGGCG 59.855 63.158 0.00 0.00 34.72 5.69
4043 7380 2.843113 AGAAAGAGGGGACAGAGATTGG 59.157 50.000 0.00 0.00 0.00 3.16
4044 7381 5.602145 AGATAGAAAGAGGGGACAGAGATTG 59.398 44.000 0.00 0.00 0.00 2.67
4045 7382 5.787327 AGATAGAAAGAGGGGACAGAGATT 58.213 41.667 0.00 0.00 0.00 2.40
4046 7383 5.393866 GAGATAGAAAGAGGGGACAGAGAT 58.606 45.833 0.00 0.00 0.00 2.75
4048 7385 3.895041 GGAGATAGAAAGAGGGGACAGAG 59.105 52.174 0.00 0.00 0.00 3.35
4049 7386 3.533907 AGGAGATAGAAAGAGGGGACAGA 59.466 47.826 0.00 0.00 0.00 3.41
4051 7388 3.533907 AGAGGAGATAGAAAGAGGGGACA 59.466 47.826 0.00 0.00 0.00 4.02
4052 7389 4.149598 GAGAGGAGATAGAAAGAGGGGAC 58.850 52.174 0.00 0.00 0.00 4.46
4053 7390 3.141272 GGAGAGGAGATAGAAAGAGGGGA 59.859 52.174 0.00 0.00 0.00 4.81
4055 7392 4.151883 CTGGAGAGGAGATAGAAAGAGGG 58.848 52.174 0.00 0.00 0.00 4.30
4056 7393 4.803452 ACTGGAGAGGAGATAGAAAGAGG 58.197 47.826 0.00 0.00 0.00 3.69
4058 7395 6.468066 GGGATACTGGAGAGGAGATAGAAAGA 60.468 46.154 0.00 0.00 0.00 2.52
4059 7396 5.714806 GGGATACTGGAGAGGAGATAGAAAG 59.285 48.000 0.00 0.00 0.00 2.62
4060 7397 5.646215 GGGATACTGGAGAGGAGATAGAAA 58.354 45.833 0.00 0.00 0.00 2.52
4062 7399 3.264706 CGGGATACTGGAGAGGAGATAGA 59.735 52.174 0.00 0.00 40.24 1.98
4064 7401 3.722908 CGGGATACTGGAGAGGAGATA 57.277 52.381 0.00 0.00 40.24 1.98
4065 7402 2.595750 CGGGATACTGGAGAGGAGAT 57.404 55.000 0.00 0.00 40.24 2.75
4075 7412 0.243907 CGCCTATGTCCGGGATACTG 59.756 60.000 0.00 0.00 45.15 2.74
4076 7413 1.533469 GCGCCTATGTCCGGGATACT 61.533 60.000 0.00 0.00 0.00 2.12
4077 7414 1.080025 GCGCCTATGTCCGGGATAC 60.080 63.158 0.00 0.00 0.00 2.24
4079 7416 3.626924 GGCGCCTATGTCCGGGAT 61.627 66.667 22.15 0.00 0.00 3.85
4082 7419 4.944372 GTCGGCGCCTATGTCCGG 62.944 72.222 26.68 6.06 43.10 5.14
4084 7421 4.203076 ACGTCGGCGCCTATGTCC 62.203 66.667 26.68 0.00 42.83 4.02
4085 7422 2.654404 GACGTCGGCGCCTATGTC 60.654 66.667 30.46 30.46 42.83 3.06
4086 7423 3.122250 GAGACGTCGGCGCCTATGT 62.122 63.158 24.47 24.47 42.83 2.29
4087 7424 2.353607 GAGACGTCGGCGCCTATG 60.354 66.667 26.68 22.03 42.83 2.23
4088 7425 3.950254 CGAGACGTCGGCGCCTAT 61.950 66.667 26.68 1.55 42.87 2.57
4095 7432 4.477975 GGGTGAGCGAGACGTCGG 62.478 72.222 10.46 7.62 46.91 4.79
4098 7435 3.681835 GGTGGGTGAGCGAGACGT 61.682 66.667 0.00 0.00 0.00 4.34
4100 7437 4.083862 GGGGTGGGTGAGCGAGAC 62.084 72.222 0.00 0.00 0.00 3.36
4106 7443 3.391382 GGAGTCGGGGTGGGTGAG 61.391 72.222 0.00 0.00 0.00 3.51
4107 7444 3.556038 ATGGAGTCGGGGTGGGTGA 62.556 63.158 0.00 0.00 0.00 4.02
4108 7445 3.009115 ATGGAGTCGGGGTGGGTG 61.009 66.667 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.