Multiple sequence alignment - TraesCS5A01G199100
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS5A01G199100
chr5A
100.000
6802
0
0
1
6802
403895920
403902721
0.000000e+00
12562.0
1
TraesCS5A01G199100
chr5A
91.778
450
34
3
224
671
119062180
119061732
2.080000e-174
623.0
2
TraesCS5A01G199100
chr5A
86.667
225
27
2
2279
2501
688125413
688125636
5.270000e-61
246.0
3
TraesCS5A01G199100
chr5A
91.111
135
9
3
4674
4806
482027212
482027345
5.420000e-41
180.0
4
TraesCS5A01G199100
chr5A
78.922
204
24
8
698
883
425488914
425488712
3.330000e-23
121.0
5
TraesCS5A01G199100
chr2A
99.587
6298
22
2
1
6294
306686899
306680602
0.000000e+00
11483.0
6
TraesCS5A01G199100
chr2A
99.208
6312
31
2
1
6294
69254116
69260426
0.000000e+00
11361.0
7
TraesCS5A01G199100
chr2A
83.576
755
84
11
1815
2554
26027741
26028470
0.000000e+00
671.0
8
TraesCS5A01G199100
chr2A
91.391
453
36
3
221
671
43440380
43440831
9.690000e-173
617.0
9
TraesCS5A01G199100
chr2A
81.280
422
58
11
5440
5849
347871778
347872190
8.510000e-84
322.0
10
TraesCS5A01G199100
chr2A
83.158
95
13
2
6314
6405
12261883
12261977
4.370000e-12
84.2
11
TraesCS5A01G199100
chr2A
83.158
95
13
2
6314
6405
12269855
12269949
4.370000e-12
84.2
12
TraesCS5A01G199100
chr3A
99.505
3230
14
1
1
3228
405844997
405841768
0.000000e+00
5875.0
13
TraesCS5A01G199100
chr3A
99.415
3076
12
3
3224
6294
405833217
405830143
0.000000e+00
5576.0
14
TraesCS5A01G199100
chr3A
85.856
806
87
15
72
860
95901320
95900525
0.000000e+00
832.0
15
TraesCS5A01G199100
chr3A
87.536
698
68
12
1058
1746
414406856
414406169
0.000000e+00
789.0
16
TraesCS5A01G199100
chr3A
84.035
451
54
5
1949
2393
644202672
644203110
1.060000e-112
418.0
17
TraesCS5A01G199100
chr3A
84.711
242
16
15
5626
5858
455227976
455227747
8.880000e-54
222.0
18
TraesCS5A01G199100
chr3A
88.889
171
16
3
661
829
558979698
558979867
2.490000e-49
207.0
19
TraesCS5A01G199100
chr3A
90.370
135
9
4
4674
4806
672876261
672876393
2.520000e-39
174.0
20
TraesCS5A01G199100
chr3A
92.593
108
8
0
4047
4154
42045565
42045458
9.130000e-34
156.0
21
TraesCS5A01G199100
chr3B
96.856
3308
60
8
2556
5853
561700417
561703690
0.000000e+00
5493.0
22
TraesCS5A01G199100
chr3B
98.082
2555
47
2
1
2554
561697705
561700258
0.000000e+00
4446.0
23
TraesCS5A01G199100
chr3B
88.951
2335
157
38
3577
5853
793141591
793143882
0.000000e+00
2789.0
24
TraesCS5A01G199100
chr3B
81.063
903
131
26
4936
5810
412402880
412401990
0.000000e+00
684.0
25
TraesCS5A01G199100
chr3B
85.597
243
13
15
5626
5858
449164742
449164512
1.140000e-57
235.0
26
TraesCS5A01G199100
chr3B
89.431
123
8
3
3232
3350
774716298
774716419
4.250000e-32
150.0
27
TraesCS5A01G199100
chr6A
97.300
2556
62
5
1
2554
602826801
602829351
0.000000e+00
4331.0
28
TraesCS5A01G199100
chr6A
97.017
1877
52
2
2556
4429
602829510
602831385
0.000000e+00
3153.0
29
TraesCS5A01G199100
chr6A
86.402
831
85
15
72
884
383585152
383584332
0.000000e+00
883.0
30
TraesCS5A01G199100
chr6A
86.282
831
86
15
72
884
46572504
46571684
0.000000e+00
878.0
31
TraesCS5A01G199100
chrUn
99.507
1622
8
0
3633
5254
384178460
384180081
0.000000e+00
2952.0
32
TraesCS5A01G199100
chrUn
90.431
209
18
2
1550
1756
76352938
76353146
2.420000e-69
274.0
33
TraesCS5A01G199100
chrUn
90.431
209
18
2
1550
1756
233823630
233823838
2.420000e-69
274.0
34
TraesCS5A01G199100
chr5B
97.959
441
9
0
5854
6294
678454812
678455252
0.000000e+00
765.0
35
TraesCS5A01G199100
chr5B
81.818
902
125
22
4936
5810
350710553
350709664
0.000000e+00
721.0
36
TraesCS5A01G199100
chr5B
91.391
453
34
4
221
671
697071500
697071949
3.490000e-172
616.0
37
TraesCS5A01G199100
chr5B
91.156
441
36
2
5854
6294
27381443
27381880
4.540000e-166
595.0
38
TraesCS5A01G199100
chr5B
87.451
255
26
6
2556
2805
672541152
672540899
8.630000e-74
289.0
39
TraesCS5A01G199100
chr5B
83.082
331
39
6
5529
5851
415054874
415055195
1.120000e-72
285.0
40
TraesCS5A01G199100
chr5B
90.860
186
15
2
3360
3543
505361016
505361201
1.460000e-61
248.0
41
TraesCS5A01G199100
chr5B
85.965
228
25
6
3130
3350
533416995
533417222
3.170000e-58
237.0
42
TraesCS5A01G199100
chr5B
79.830
352
41
18
3699
4026
347127649
347127994
5.310000e-56
230.0
43
TraesCS5A01G199100
chr7B
86.434
715
73
12
1058
1756
659831912
659832618
0.000000e+00
761.0
44
TraesCS5A01G199100
chr7B
82.378
471
68
10
4936
5397
524611207
524611671
4.940000e-106
396.0
45
TraesCS5A01G199100
chr7B
85.597
243
13
15
5626
5858
353328535
353328765
1.140000e-57
235.0
46
TraesCS5A01G199100
chr6B
93.424
441
25
3
5854
6294
176215908
176215472
0.000000e+00
651.0
47
TraesCS5A01G199100
chr6B
93.424
441
25
3
5854
6294
176240690
176240254
0.000000e+00
651.0
48
TraesCS5A01G199100
chr6B
92.744
441
28
3
5854
6294
176154602
176154166
9.620000e-178
634.0
49
TraesCS5A01G199100
chr6B
92.744
441
28
3
5854
6294
176178572
176178136
9.620000e-178
634.0
50
TraesCS5A01G199100
chr6B
91.455
433
31
6
455
884
49382308
49381879
2.110000e-164
590.0
51
TraesCS5A01G199100
chr6B
87.795
254
27
4
2556
2805
599819473
599819726
1.860000e-75
294.0
52
TraesCS5A01G199100
chr6B
84.052
232
26
5
5626
5850
536849880
536849653
5.340000e-51
213.0
53
TraesCS5A01G199100
chr2B
91.150
452
35
5
224
671
161446244
161445794
5.830000e-170
608.0
54
TraesCS5A01G199100
chr2B
87.795
254
27
4
2556
2805
183534428
183534175
1.860000e-75
294.0
55
TraesCS5A01G199100
chr7A
84.270
445
43
11
1955
2393
374542690
374542267
6.350000e-110
409.0
56
TraesCS5A01G199100
chr7A
93.443
122
7
1
4674
4794
731392157
731392036
5.420000e-41
180.0
57
TraesCS5A01G199100
chr7A
89.431
123
9
2
3232
3350
121783571
121783693
1.180000e-32
152.0
58
TraesCS5A01G199100
chr4A
88.073
327
39
0
4043
4369
222106844
222107170
8.270000e-104
388.0
59
TraesCS5A01G199100
chr4A
95.238
63
2
1
1014
1075
693877369
693877307
1.560000e-16
99.0
60
TraesCS5A01G199100
chr6D
83.649
422
49
11
5440
5852
425060481
425060891
4.980000e-101
379.0
61
TraesCS5A01G199100
chr5D
94.898
196
10
0
6607
6802
478592643
478592838
2.380000e-79
307.0
62
TraesCS5A01G199100
chr2D
86.716
271
33
2
2279
2547
117801407
117801676
1.430000e-76
298.0
63
TraesCS5A01G199100
chr3D
86.000
250
31
4
2560
2805
550355777
550356026
1.450000e-66
265.0
64
TraesCS5A01G199100
chr1B
90.964
166
14
1
3377
3541
562727229
562727064
8.880000e-54
222.0
65
TraesCS5A01G199100
chr1B
88.710
124
9
3
3232
3350
562727811
562727688
5.500000e-31
147.0
66
TraesCS5A01G199100
chr1B
82.857
140
23
1
6294
6432
685904998
685905137
2.580000e-24
124.0
67
TraesCS5A01G199100
chr1B
91.837
49
4
0
6314
6362
530442260
530442212
1.220000e-07
69.4
68
TraesCS5A01G199100
chr4B
84.322
236
24
7
5626
5852
305510803
305510572
1.150000e-52
219.0
69
TraesCS5A01G199100
chr4B
86.500
200
23
2
2355
2554
241184998
241185193
4.130000e-52
217.0
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS5A01G199100
chr5A
403895920
403902721
6801
False
12562.0
12562
100.0000
1
6802
1
chr5A.!!$F1
6801
1
TraesCS5A01G199100
chr2A
306680602
306686899
6297
True
11483.0
11483
99.5870
1
6294
1
chr2A.!!$R1
6293
2
TraesCS5A01G199100
chr2A
69254116
69260426
6310
False
11361.0
11361
99.2080
1
6294
1
chr2A.!!$F5
6293
3
TraesCS5A01G199100
chr2A
26027741
26028470
729
False
671.0
671
83.5760
1815
2554
1
chr2A.!!$F3
739
4
TraesCS5A01G199100
chr3A
405841768
405844997
3229
True
5875.0
5875
99.5050
1
3228
1
chr3A.!!$R4
3227
5
TraesCS5A01G199100
chr3A
405830143
405833217
3074
True
5576.0
5576
99.4150
3224
6294
1
chr3A.!!$R3
3070
6
TraesCS5A01G199100
chr3A
95900525
95901320
795
True
832.0
832
85.8560
72
860
1
chr3A.!!$R2
788
7
TraesCS5A01G199100
chr3A
414406169
414406856
687
True
789.0
789
87.5360
1058
1746
1
chr3A.!!$R5
688
8
TraesCS5A01G199100
chr3B
561697705
561703690
5985
False
4969.5
5493
97.4690
1
5853
2
chr3B.!!$F3
5852
9
TraesCS5A01G199100
chr3B
793141591
793143882
2291
False
2789.0
2789
88.9510
3577
5853
1
chr3B.!!$F2
2276
10
TraesCS5A01G199100
chr3B
412401990
412402880
890
True
684.0
684
81.0630
4936
5810
1
chr3B.!!$R1
874
11
TraesCS5A01G199100
chr6A
602826801
602831385
4584
False
3742.0
4331
97.1585
1
4429
2
chr6A.!!$F1
4428
12
TraesCS5A01G199100
chr6A
383584332
383585152
820
True
883.0
883
86.4020
72
884
1
chr6A.!!$R2
812
13
TraesCS5A01G199100
chr6A
46571684
46572504
820
True
878.0
878
86.2820
72
884
1
chr6A.!!$R1
812
14
TraesCS5A01G199100
chrUn
384178460
384180081
1621
False
2952.0
2952
99.5070
3633
5254
1
chrUn.!!$F3
1621
15
TraesCS5A01G199100
chr5B
350709664
350710553
889
True
721.0
721
81.8180
4936
5810
1
chr5B.!!$R1
874
16
TraesCS5A01G199100
chr7B
659831912
659832618
706
False
761.0
761
86.4340
1058
1756
1
chr7B.!!$F3
698
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1471
1501
0.260230
TTTGCCTTTCACAGGGGTCA
59.740
50.000
0.00
0.0
44.16
4.02
F
3753
4000
6.013553
AGCAGGCTCATAGATGATATCTTGTT
60.014
38.462
3.98
0.0
40.76
2.83
F
4207
4484
2.741612
CAGAAAATTGGCTGCGTTCAA
58.258
42.857
0.00
0.0
0.00
2.69
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
3753
4000
1.828595
TCTAGGTAATCCACTGCGCAA
59.171
47.619
13.05
0.0
35.89
4.85
R
4662
4939
7.042791
GGTTATTGCATGGTATGGAAAATTTCG
60.043
37.037
0.00
0.0
43.81
3.46
R
6339
6654
0.028505
GCATGACCACATCATCACGC
59.971
55.000
0.00
0.0
45.52
5.34
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
1471
1501
0.260230
TTTGCCTTTCACAGGGGTCA
59.740
50.000
0.00
0.00
44.16
4.02
3753
4000
6.013553
AGCAGGCTCATAGATGATATCTTGTT
60.014
38.462
3.98
0.00
40.76
2.83
4207
4484
2.741612
CAGAAAATTGGCTGCGTTCAA
58.258
42.857
0.00
0.00
0.00
2.69
4662
4939
8.921353
TCTAGAGTAGGTTATGTCTCCATTAC
57.079
38.462
0.00
0.00
32.29
1.89
6294
6609
0.108329
CGCAACCGGGTCATCTAGTT
60.108
55.000
6.32
0.00
0.00
2.24
6295
6610
1.653151
GCAACCGGGTCATCTAGTTC
58.347
55.000
6.32
0.00
0.00
3.01
6296
6611
1.207329
GCAACCGGGTCATCTAGTTCT
59.793
52.381
6.32
0.00
0.00
3.01
6297
6612
2.429610
GCAACCGGGTCATCTAGTTCTA
59.570
50.000
6.32
0.00
0.00
2.10
6298
6613
3.118884
GCAACCGGGTCATCTAGTTCTAA
60.119
47.826
6.32
0.00
0.00
2.10
6299
6614
4.683832
CAACCGGGTCATCTAGTTCTAAG
58.316
47.826
6.32
0.00
0.00
2.18
6300
6615
4.246712
ACCGGGTCATCTAGTTCTAAGA
57.753
45.455
6.32
0.00
0.00
2.10
6301
6616
4.607239
ACCGGGTCATCTAGTTCTAAGAA
58.393
43.478
6.32
0.00
0.00
2.52
6302
6617
5.209659
ACCGGGTCATCTAGTTCTAAGAAT
58.790
41.667
6.32
0.00
0.00
2.40
6303
6618
6.371278
ACCGGGTCATCTAGTTCTAAGAATA
58.629
40.000
6.32
0.00
0.00
1.75
6304
6619
6.490721
ACCGGGTCATCTAGTTCTAAGAATAG
59.509
42.308
6.32
0.00
0.00
1.73
6305
6620
6.071840
CCGGGTCATCTAGTTCTAAGAATAGG
60.072
46.154
0.00
0.00
0.00
2.57
6306
6621
6.570764
CGGGTCATCTAGTTCTAAGAATAGGC
60.571
46.154
0.00
0.00
0.00
3.93
6307
6622
6.267928
GGGTCATCTAGTTCTAAGAATAGGCA
59.732
42.308
0.00
0.00
0.00
4.75
6308
6623
7.202011
GGGTCATCTAGTTCTAAGAATAGGCAA
60.202
40.741
0.00
0.00
0.00
4.52
6309
6624
8.204836
GGTCATCTAGTTCTAAGAATAGGCAAA
58.795
37.037
0.00
0.00
0.00
3.68
6310
6625
9.255304
GTCATCTAGTTCTAAGAATAGGCAAAG
57.745
37.037
0.00
0.00
0.00
2.77
6311
6626
9.201989
TCATCTAGTTCTAAGAATAGGCAAAGA
57.798
33.333
0.00
0.00
0.00
2.52
6312
6627
9.823647
CATCTAGTTCTAAGAATAGGCAAAGAA
57.176
33.333
0.00
0.00
0.00
2.52
6314
6629
9.036980
TCTAGTTCTAAGAATAGGCAAAGAAGT
57.963
33.333
0.00
0.00
32.80
3.01
6315
6630
7.913674
AGTTCTAAGAATAGGCAAAGAAGTG
57.086
36.000
0.00
0.00
0.00
3.16
6316
6631
6.881602
AGTTCTAAGAATAGGCAAAGAAGTGG
59.118
38.462
0.00
0.00
0.00
4.00
6317
6632
6.374417
TCTAAGAATAGGCAAAGAAGTGGT
57.626
37.500
0.00
0.00
0.00
4.16
6318
6633
6.173339
TCTAAGAATAGGCAAAGAAGTGGTG
58.827
40.000
0.00
0.00
0.00
4.17
6319
6634
3.084786
AGAATAGGCAAAGAAGTGGTGC
58.915
45.455
0.00
0.00
37.55
5.01
6323
6638
2.719376
GCAAAGAAGTGGTGCCAGA
58.281
52.632
0.00
0.00
31.94
3.86
6324
6639
1.032014
GCAAAGAAGTGGTGCCAGAA
58.968
50.000
0.00
0.00
31.94
3.02
6325
6640
1.000938
GCAAAGAAGTGGTGCCAGAAG
60.001
52.381
0.00
0.00
31.94
2.85
6326
6641
2.301346
CAAAGAAGTGGTGCCAGAAGT
58.699
47.619
0.00
0.00
0.00
3.01
6327
6642
2.262423
AAGAAGTGGTGCCAGAAGTC
57.738
50.000
0.00
0.00
0.00
3.01
6328
6643
0.398318
AGAAGTGGTGCCAGAAGTCC
59.602
55.000
0.00
0.00
0.00
3.85
6329
6644
0.108585
GAAGTGGTGCCAGAAGTCCA
59.891
55.000
0.00
0.00
0.00
4.02
6330
6645
4.065110
GTGGTGCCAGAAGTCCAC
57.935
61.111
0.00
0.00
42.40
4.02
6331
6646
1.961277
GTGGTGCCAGAAGTCCACG
60.961
63.158
0.00
0.00
40.36
4.94
6332
6647
2.137528
TGGTGCCAGAAGTCCACGA
61.138
57.895
0.00
0.00
0.00
4.35
6333
6648
1.668151
GGTGCCAGAAGTCCACGAC
60.668
63.158
0.00
0.00
0.00
4.34
6334
6649
1.069090
GTGCCAGAAGTCCACGACA
59.931
57.895
0.00
0.00
34.60
4.35
6335
6650
1.069090
TGCCAGAAGTCCACGACAC
59.931
57.895
0.00
0.00
34.60
3.67
6336
6651
1.069090
GCCAGAAGTCCACGACACA
59.931
57.895
0.00
0.00
34.60
3.72
6337
6652
0.531974
GCCAGAAGTCCACGACACAA
60.532
55.000
0.00
0.00
34.60
3.33
6338
6653
1.502231
CCAGAAGTCCACGACACAAG
58.498
55.000
0.00
0.00
34.60
3.16
6339
6654
1.502231
CAGAAGTCCACGACACAAGG
58.498
55.000
0.00
0.00
34.60
3.61
6340
6655
0.249911
AGAAGTCCACGACACAAGGC
60.250
55.000
0.00
0.00
34.60
4.35
6341
6656
1.557443
GAAGTCCACGACACAAGGCG
61.557
60.000
0.00
0.00
34.60
5.52
6342
6657
2.279918
GTCCACGACACAAGGCGT
60.280
61.111
0.00
0.00
42.11
5.68
6352
6667
2.858622
ACAAGGCGTGATGATGTGG
58.141
52.632
7.60
0.00
0.00
4.17
6353
6668
0.036732
ACAAGGCGTGATGATGTGGT
59.963
50.000
7.60
0.00
0.00
4.16
6354
6669
0.729116
CAAGGCGTGATGATGTGGTC
59.271
55.000
0.00
0.00
0.00
4.02
6355
6670
0.324614
AAGGCGTGATGATGTGGTCA
59.675
50.000
0.00
0.00
42.06
4.02
6365
6680
2.910199
TGATGTGGTCATGCTAGAAGC
58.090
47.619
0.00
0.00
42.82
3.86
6378
6693
4.994220
GCTAGAAGCAGATGATGACATG
57.006
45.455
0.00
0.00
41.89
3.21
6379
6694
3.747010
GCTAGAAGCAGATGATGACATGG
59.253
47.826
0.00
0.00
41.89
3.66
6380
6695
2.573369
AGAAGCAGATGATGACATGGC
58.427
47.619
0.00
0.00
36.82
4.40
6381
6696
1.263484
GAAGCAGATGATGACATGGCG
59.737
52.381
0.00
0.00
38.00
5.69
6382
6697
1.164662
AGCAGATGATGACATGGCGC
61.165
55.000
0.00
0.00
38.00
6.53
6383
6698
1.947013
CAGATGATGACATGGCGCC
59.053
57.895
22.73
22.73
36.82
6.53
6384
6699
0.816421
CAGATGATGACATGGCGCCA
60.816
55.000
34.80
34.80
36.82
5.69
6385
6700
0.534427
AGATGATGACATGGCGCCAG
60.534
55.000
35.36
26.66
36.82
4.85
6386
6701
0.533531
GATGATGACATGGCGCCAGA
60.534
55.000
35.36
18.42
36.82
3.86
6387
6702
0.107066
ATGATGACATGGCGCCAGAA
60.107
50.000
35.36
19.63
35.21
3.02
6388
6703
1.026182
TGATGACATGGCGCCAGAAC
61.026
55.000
35.36
25.52
0.00
3.01
6389
6704
0.745845
GATGACATGGCGCCAGAACT
60.746
55.000
35.36
15.81
0.00
3.01
6390
6705
0.745845
ATGACATGGCGCCAGAACTC
60.746
55.000
35.36
23.61
0.00
3.01
6391
6706
2.045926
ACATGGCGCCAGAACTCC
60.046
61.111
35.36
1.50
0.00
3.85
6392
6707
2.046023
CATGGCGCCAGAACTCCA
60.046
61.111
35.36
8.54
0.00
3.86
6393
6708
2.045926
ATGGCGCCAGAACTCCAC
60.046
61.111
35.36
0.00
0.00
4.02
6394
6709
2.596851
ATGGCGCCAGAACTCCACT
61.597
57.895
35.36
11.90
0.00
4.00
6395
6710
1.264749
ATGGCGCCAGAACTCCACTA
61.265
55.000
35.36
6.16
0.00
2.74
6396
6711
1.448013
GGCGCCAGAACTCCACTAC
60.448
63.158
24.80
0.00
0.00
2.73
6397
6712
1.292223
GCGCCAGAACTCCACTACA
59.708
57.895
0.00
0.00
0.00
2.74
6398
6713
1.014564
GCGCCAGAACTCCACTACAC
61.015
60.000
0.00
0.00
0.00
2.90
6399
6714
0.317160
CGCCAGAACTCCACTACACA
59.683
55.000
0.00
0.00
0.00
3.72
6400
6715
1.270094
CGCCAGAACTCCACTACACAA
60.270
52.381
0.00
0.00
0.00
3.33
6401
6716
2.417719
GCCAGAACTCCACTACACAAG
58.582
52.381
0.00
0.00
0.00
3.16
6402
6717
2.872038
GCCAGAACTCCACTACACAAGG
60.872
54.545
0.00
0.00
0.00
3.61
6403
6718
2.417719
CAGAACTCCACTACACAAGGC
58.582
52.381
0.00
0.00
0.00
4.35
6404
6719
1.000955
AGAACTCCACTACACAAGGCG
59.999
52.381
0.00
0.00
0.00
5.52
6405
6720
0.034896
AACTCCACTACACAAGGCGG
59.965
55.000
0.00
0.00
0.00
6.13
6406
6721
0.830444
ACTCCACTACACAAGGCGGA
60.830
55.000
0.00
0.00
31.87
5.54
6407
6722
0.389948
CTCCACTACACAAGGCGGAC
60.390
60.000
0.00
0.00
30.14
4.79
6408
6723
1.375523
CCACTACACAAGGCGGACC
60.376
63.158
0.00
0.00
0.00
4.46
6409
6724
1.736645
CACTACACAAGGCGGACCG
60.737
63.158
10.29
10.29
42.76
4.79
6410
6725
1.904865
ACTACACAAGGCGGACCGA
60.905
57.895
20.50
0.00
42.76
4.69
6411
6726
1.445582
CTACACAAGGCGGACCGAC
60.446
63.158
20.50
17.10
42.76
4.79
6412
6727
3.271706
TACACAAGGCGGACCGACG
62.272
63.158
20.50
5.41
41.28
5.12
6413
6728
4.657824
CACAAGGCGGACCGACGT
62.658
66.667
20.50
11.22
41.28
4.34
6431
6746
2.538790
TGGTTCTGCCAGAAGACCA
58.461
52.632
13.14
13.14
43.61
4.02
6432
6747
0.843309
TGGTTCTGCCAGAAGACCAA
59.157
50.000
14.49
0.94
43.61
3.67
6433
6748
1.202806
TGGTTCTGCCAGAAGACCAAG
60.203
52.381
14.49
0.00
43.61
3.61
6434
6749
1.072331
GGTTCTGCCAGAAGACCAAGA
59.928
52.381
7.55
0.00
34.42
3.02
6435
6750
2.147150
GTTCTGCCAGAAGACCAAGAC
58.853
52.381
7.55
0.00
34.42
3.01
6436
6751
0.318441
TCTGCCAGAAGACCAAGACG
59.682
55.000
0.00
0.00
0.00
4.18
6437
6752
1.294659
CTGCCAGAAGACCAAGACGC
61.295
60.000
0.00
0.00
0.00
5.19
6438
6753
2.383527
GCCAGAAGACCAAGACGCG
61.384
63.158
3.53
3.53
0.00
6.01
6439
6754
2.383527
CCAGAAGACCAAGACGCGC
61.384
63.158
5.73
0.00
0.00
6.86
6440
6755
1.664649
CAGAAGACCAAGACGCGCA
60.665
57.895
5.73
0.00
0.00
6.09
6441
6756
1.373497
AGAAGACCAAGACGCGCAG
60.373
57.895
5.73
2.42
0.00
5.18
6459
6774
3.417601
CGAGGTATGTCGCTCGGA
58.582
61.111
0.00
0.00
35.13
4.55
6460
6775
1.280142
CGAGGTATGTCGCTCGGAG
59.720
63.158
0.00
0.00
35.13
4.63
6461
6776
1.008309
GAGGTATGTCGCTCGGAGC
60.008
63.158
19.92
19.92
38.02
4.70
6462
6777
1.725557
GAGGTATGTCGCTCGGAGCA
61.726
60.000
27.83
13.43
42.58
4.26
6463
6778
1.141019
GGTATGTCGCTCGGAGCAA
59.859
57.895
27.83
8.92
42.58
3.91
6464
6779
0.459585
GGTATGTCGCTCGGAGCAAA
60.460
55.000
27.83
13.71
42.58
3.68
6465
6780
0.645868
GTATGTCGCTCGGAGCAAAC
59.354
55.000
27.83
23.45
42.58
2.93
6466
6781
0.800683
TATGTCGCTCGGAGCAAACG
60.801
55.000
27.83
12.84
42.58
3.60
6467
6782
2.430244
GTCGCTCGGAGCAAACGA
60.430
61.111
27.83
14.90
42.58
3.85
6468
6783
2.430244
TCGCTCGGAGCAAACGAC
60.430
61.111
27.83
0.00
42.58
4.34
6469
6784
3.827784
CGCTCGGAGCAAACGACG
61.828
66.667
27.83
7.54
42.58
5.12
6470
6785
3.479269
GCTCGGAGCAAACGACGG
61.479
66.667
24.42
0.00
41.89
4.79
6471
6786
2.049433
CTCGGAGCAAACGACGGT
60.049
61.111
0.00
0.00
36.25
4.83
6472
6787
2.355363
TCGGAGCAAACGACGGTG
60.355
61.111
0.00
0.00
35.12
4.94
6473
6788
3.411351
CGGAGCAAACGACGGTGG
61.411
66.667
0.00
0.00
0.00
4.61
6474
6789
3.723348
GGAGCAAACGACGGTGGC
61.723
66.667
3.36
3.36
0.00
5.01
6475
6790
2.970324
GAGCAAACGACGGTGGCA
60.970
61.111
16.00
0.00
31.65
4.92
6476
6791
2.281484
AGCAAACGACGGTGGCAT
60.281
55.556
16.00
0.00
31.65
4.40
6477
6792
1.004320
AGCAAACGACGGTGGCATA
60.004
52.632
16.00
0.00
31.65
3.14
6478
6793
0.392461
AGCAAACGACGGTGGCATAT
60.392
50.000
16.00
0.00
31.65
1.78
6479
6794
1.134640
AGCAAACGACGGTGGCATATA
60.135
47.619
16.00
0.00
31.65
0.86
6480
6795
1.004292
GCAAACGACGGTGGCATATAC
60.004
52.381
7.57
0.00
0.00
1.47
6481
6796
2.272678
CAAACGACGGTGGCATATACA
58.727
47.619
0.00
0.00
0.00
2.29
6482
6797
1.930567
AACGACGGTGGCATATACAC
58.069
50.000
0.00
2.01
38.10
2.90
6483
6798
0.818938
ACGACGGTGGCATATACACA
59.181
50.000
0.00
0.00
40.54
3.72
6484
6799
1.205179
ACGACGGTGGCATATACACAA
59.795
47.619
0.00
0.00
40.54
3.33
6485
6800
2.159014
ACGACGGTGGCATATACACAAT
60.159
45.455
0.00
0.23
40.54
2.71
6486
6801
2.220824
CGACGGTGGCATATACACAATG
59.779
50.000
10.73
4.19
40.54
2.82
6512
6827
1.221414
GGAATTTCTCCGCTCGATGG
58.779
55.000
0.00
0.00
33.37
3.51
6513
6828
0.583917
GAATTTCTCCGCTCGATGGC
59.416
55.000
0.00
0.00
0.00
4.40
6514
6829
0.179000
AATTTCTCCGCTCGATGGCT
59.821
50.000
0.00
0.00
0.00
4.75
6515
6830
0.249657
ATTTCTCCGCTCGATGGCTC
60.250
55.000
0.00
0.00
0.00
4.70
6516
6831
1.604147
TTTCTCCGCTCGATGGCTCA
61.604
55.000
0.00
0.00
0.00
4.26
6517
6832
2.009424
TTCTCCGCTCGATGGCTCAG
62.009
60.000
0.00
0.00
0.00
3.35
6518
6833
4.212913
TCCGCTCGATGGCTCAGC
62.213
66.667
0.00
0.00
0.00
4.26
6540
6855
3.723348
GCGTCCGGCAACCAAGTC
61.723
66.667
0.00
0.00
42.87
3.01
6541
6856
3.411351
CGTCCGGCAACCAAGTCG
61.411
66.667
0.00
0.00
36.15
4.18
6547
6862
4.389576
GCAACCAAGTCGGCGCTG
62.390
66.667
10.86
10.86
39.03
5.18
6548
6863
4.389576
CAACCAAGTCGGCGCTGC
62.390
66.667
12.58
6.97
39.03
5.25
6549
6864
4.927782
AACCAAGTCGGCGCTGCA
62.928
61.111
12.58
0.00
39.03
4.41
6550
6865
4.704833
ACCAAGTCGGCGCTGCAT
62.705
61.111
12.58
0.00
39.03
3.96
6551
6866
4.170062
CCAAGTCGGCGCTGCATG
62.170
66.667
12.58
9.92
0.00
4.06
6552
6867
4.824166
CAAGTCGGCGCTGCATGC
62.824
66.667
12.58
11.82
38.57
4.06
6565
6880
3.826754
CATGCAGCAGGCCAGCAG
61.827
66.667
23.38
15.93
42.14
4.24
6569
6884
4.052229
CAGCAGGCCAGCAGCAAC
62.052
66.667
23.38
0.00
46.50
4.17
6573
6888
4.269523
AGGCCAGCAGCAACCGAA
62.270
61.111
5.01
0.00
46.50
4.30
6574
6889
3.741476
GGCCAGCAGCAACCGAAG
61.741
66.667
0.00
0.00
46.50
3.79
6593
6908
2.856032
CAGCAGCTGCACGTACAC
59.144
61.111
38.24
8.57
45.16
2.90
6594
6909
2.357517
AGCAGCTGCACGTACACC
60.358
61.111
38.24
7.79
45.16
4.16
6595
6910
3.777925
GCAGCTGCACGTACACCG
61.778
66.667
33.36
0.00
41.59
4.94
6596
6911
3.777925
CAGCTGCACGTACACCGC
61.778
66.667
0.00
0.00
41.42
5.68
6614
6929
4.340019
CGGCGTTGGCATGCACAA
62.340
61.111
21.36
17.64
42.47
3.33
6615
6930
2.262292
GGCGTTGGCATGCACAAT
59.738
55.556
21.36
0.00
42.47
2.71
6616
6931
1.806758
GGCGTTGGCATGCACAATC
60.807
57.895
21.36
15.06
42.47
2.67
6617
6932
1.806758
GCGTTGGCATGCACAATCC
60.807
57.895
21.36
11.66
39.62
3.01
6618
6933
1.585517
CGTTGGCATGCACAATCCA
59.414
52.632
21.36
3.75
0.00
3.41
6619
6934
0.457166
CGTTGGCATGCACAATCCAG
60.457
55.000
21.36
10.08
0.00
3.86
6620
6935
0.604578
GTTGGCATGCACAATCCAGT
59.395
50.000
21.36
0.00
0.00
4.00
6621
6936
0.604073
TTGGCATGCACAATCCAGTG
59.396
50.000
21.36
0.00
42.37
3.66
6622
6937
1.252215
TGGCATGCACAATCCAGTGG
61.252
55.000
21.36
1.40
39.87
4.00
6623
6938
0.966875
GGCATGCACAATCCAGTGGA
60.967
55.000
21.36
15.88
44.02
4.02
6624
6939
0.171903
GCATGCACAATCCAGTGGAC
59.828
55.000
15.86
1.31
42.69
4.02
6625
6940
1.536940
CATGCACAATCCAGTGGACA
58.463
50.000
15.86
8.04
42.69
4.02
6626
6941
1.887854
CATGCACAATCCAGTGGACAA
59.112
47.619
15.86
0.00
42.69
3.18
6627
6942
1.608055
TGCACAATCCAGTGGACAAG
58.392
50.000
15.86
9.87
39.87
3.16
6628
6943
0.242017
GCACAATCCAGTGGACAAGC
59.758
55.000
15.86
12.68
39.87
4.01
6629
6944
0.883833
CACAATCCAGTGGACAAGCC
59.116
55.000
15.86
0.00
32.98
4.35
6630
6945
0.606401
ACAATCCAGTGGACAAGCCG
60.606
55.000
15.86
1.95
40.66
5.52
6631
6946
1.002134
AATCCAGTGGACAAGCCGG
60.002
57.895
15.86
0.00
40.66
6.13
6632
6947
1.488705
AATCCAGTGGACAAGCCGGA
61.489
55.000
15.86
0.00
40.66
5.14
6633
6948
1.274703
ATCCAGTGGACAAGCCGGAT
61.275
55.000
15.86
0.00
40.66
4.18
6634
6949
1.746615
CCAGTGGACAAGCCGGATG
60.747
63.158
5.05
5.76
40.66
3.51
6635
6950
1.746615
CAGTGGACAAGCCGGATGG
60.747
63.158
5.05
0.00
40.66
3.51
6636
6951
2.224159
AGTGGACAAGCCGGATGGT
61.224
57.895
5.05
0.03
40.66
3.55
6637
6952
2.040544
GTGGACAAGCCGGATGGTG
61.041
63.158
3.29
0.00
40.66
4.17
6638
6953
2.438434
GGACAAGCCGGATGGTGG
60.438
66.667
3.29
0.00
37.67
4.61
6639
6954
2.351276
GACAAGCCGGATGGTGGT
59.649
61.111
3.29
0.00
37.67
4.16
6640
6955
2.034066
ACAAGCCGGATGGTGGTG
59.966
61.111
5.05
0.00
37.67
4.17
6641
6956
2.751436
CAAGCCGGATGGTGGTGG
60.751
66.667
5.05
0.00
37.67
4.61
6653
6968
3.574952
TGGTGGCCACTACAAGCT
58.425
55.556
33.91
0.00
0.00
3.74
6654
6969
1.073025
TGGTGGCCACTACAAGCTG
59.927
57.895
33.91
0.00
0.00
4.24
6655
6970
1.073199
GGTGGCCACTACAAGCTGT
59.927
57.895
33.91
0.00
0.00
4.40
6656
6971
0.955919
GGTGGCCACTACAAGCTGTC
60.956
60.000
33.91
10.67
0.00
3.51
6657
6972
0.035458
GTGGCCACTACAAGCTGTCT
59.965
55.000
29.12
0.00
0.00
3.41
6658
6973
0.035317
TGGCCACTACAAGCTGTCTG
59.965
55.000
0.00
0.00
0.00
3.51
6659
6974
1.301677
GGCCACTACAAGCTGTCTGC
61.302
60.000
0.00
0.00
43.29
4.26
6660
6975
0.603707
GCCACTACAAGCTGTCTGCA
60.604
55.000
4.39
0.00
45.94
4.41
6661
6976
1.882912
CCACTACAAGCTGTCTGCAA
58.117
50.000
4.39
0.00
45.94
4.08
6662
6977
1.532868
CCACTACAAGCTGTCTGCAAC
59.467
52.381
4.39
0.00
45.94
4.17
6663
6978
2.212652
CACTACAAGCTGTCTGCAACA
58.787
47.619
4.39
0.00
45.94
3.33
6670
6985
4.462394
TGTCTGCAACAGCTCCAC
57.538
55.556
0.00
0.00
32.81
4.02
6671
6986
1.227943
TGTCTGCAACAGCTCCACC
60.228
57.895
0.00
0.00
32.81
4.61
6672
6987
1.227943
GTCTGCAACAGCTCCACCA
60.228
57.895
0.00
0.00
0.00
4.17
6673
6988
0.819259
GTCTGCAACAGCTCCACCAA
60.819
55.000
0.00
0.00
0.00
3.67
6674
6989
0.819259
TCTGCAACAGCTCCACCAAC
60.819
55.000
0.00
0.00
0.00
3.77
6675
6990
2.121564
CTGCAACAGCTCCACCAACG
62.122
60.000
0.00
0.00
0.00
4.10
6676
6991
1.891919
GCAACAGCTCCACCAACGA
60.892
57.895
0.00
0.00
0.00
3.85
6677
6992
1.845809
GCAACAGCTCCACCAACGAG
61.846
60.000
0.00
0.00
0.00
4.18
6682
6997
4.268687
CTCCACCAACGAGCTCAC
57.731
61.111
15.40
0.00
0.00
3.51
6683
6998
1.668294
CTCCACCAACGAGCTCACT
59.332
57.895
15.40
0.00
0.00
3.41
6684
6999
0.888619
CTCCACCAACGAGCTCACTA
59.111
55.000
15.40
0.00
0.00
2.74
6685
7000
0.601558
TCCACCAACGAGCTCACTAC
59.398
55.000
15.40
0.00
0.00
2.73
6686
7001
0.389948
CCACCAACGAGCTCACTACC
60.390
60.000
15.40
0.00
0.00
3.18
6687
7002
0.317160
CACCAACGAGCTCACTACCA
59.683
55.000
15.40
0.00
0.00
3.25
6688
7003
0.317479
ACCAACGAGCTCACTACCAC
59.683
55.000
15.40
0.00
0.00
4.16
6689
7004
0.317160
CCAACGAGCTCACTACCACA
59.683
55.000
15.40
0.00
0.00
4.17
6690
7005
1.066858
CCAACGAGCTCACTACCACAT
60.067
52.381
15.40
0.00
0.00
3.21
6691
7006
1.995484
CAACGAGCTCACTACCACATG
59.005
52.381
15.40
0.00
0.00
3.21
6692
7007
0.532573
ACGAGCTCACTACCACATGG
59.467
55.000
15.40
0.00
42.17
3.66
6693
7008
0.817654
CGAGCTCACTACCACATGGA
59.182
55.000
15.40
0.00
38.94
3.41
6694
7009
1.202348
CGAGCTCACTACCACATGGAG
60.202
57.143
15.40
0.60
38.94
3.86
6695
7010
1.827969
GAGCTCACTACCACATGGAGT
59.172
52.381
9.40
1.24
38.94
3.85
6701
7016
2.497675
CACTACCACATGGAGTGCTAGT
59.502
50.000
4.53
0.00
45.88
2.57
6702
7017
3.699538
CACTACCACATGGAGTGCTAGTA
59.300
47.826
4.53
0.00
44.12
1.82
6703
7018
4.159693
CACTACCACATGGAGTGCTAGTAA
59.840
45.833
4.53
0.00
44.12
2.24
6704
7019
4.962995
ACTACCACATGGAGTGCTAGTAAT
59.037
41.667
4.53
0.00
44.11
1.89
6705
7020
5.163405
ACTACCACATGGAGTGCTAGTAATG
60.163
44.000
4.53
0.00
44.11
1.90
6706
7021
8.090687
ACTACCACATGGAGTGCTAGTAATGG
62.091
46.154
4.53
0.00
44.11
3.16
6707
7022
4.406648
CACATGGAGTGCTAGTAATGGA
57.593
45.455
0.00
0.00
42.15
3.41
6708
7023
4.965814
CACATGGAGTGCTAGTAATGGAT
58.034
43.478
0.00
0.00
42.15
3.41
6709
7024
4.753610
CACATGGAGTGCTAGTAATGGATG
59.246
45.833
0.00
0.00
42.15
3.51
6710
7025
4.202398
ACATGGAGTGCTAGTAATGGATGG
60.202
45.833
0.00
0.00
0.00
3.51
6711
7026
2.705658
TGGAGTGCTAGTAATGGATGGG
59.294
50.000
0.00
0.00
0.00
4.00
6712
7027
2.551071
GGAGTGCTAGTAATGGATGGGC
60.551
54.545
0.00
0.00
0.00
5.36
6713
7028
2.370189
GAGTGCTAGTAATGGATGGGCT
59.630
50.000
0.00
0.00
0.00
5.19
6714
7029
3.578716
GAGTGCTAGTAATGGATGGGCTA
59.421
47.826
0.00
0.00
0.00
3.93
6715
7030
3.325135
AGTGCTAGTAATGGATGGGCTAC
59.675
47.826
0.00
0.00
0.00
3.58
6716
7031
3.071023
GTGCTAGTAATGGATGGGCTACA
59.929
47.826
0.00
0.00
0.00
2.74
6717
7032
3.714280
TGCTAGTAATGGATGGGCTACAA
59.286
43.478
0.00
0.00
0.00
2.41
6718
7033
4.350816
TGCTAGTAATGGATGGGCTACAAT
59.649
41.667
0.00
0.00
0.00
2.71
6719
7034
5.546110
TGCTAGTAATGGATGGGCTACAATA
59.454
40.000
0.00
0.00
0.00
1.90
6720
7035
6.215431
TGCTAGTAATGGATGGGCTACAATAT
59.785
38.462
0.00
0.00
0.00
1.28
6721
7036
6.540189
GCTAGTAATGGATGGGCTACAATATG
59.460
42.308
0.00
0.00
0.00
1.78
6722
7037
5.256474
AGTAATGGATGGGCTACAATATGC
58.744
41.667
0.00
0.00
0.00
3.14
6723
7038
2.183478
TGGATGGGCTACAATATGCG
57.817
50.000
0.00
0.00
0.00
4.73
6724
7039
0.804989
GGATGGGCTACAATATGCGC
59.195
55.000
0.00
0.00
41.57
6.09
6726
7041
3.485764
TGGGCTACAATATGCGCAA
57.514
47.368
17.11
4.13
46.37
4.85
6727
7042
1.021202
TGGGCTACAATATGCGCAAC
58.979
50.000
17.11
0.00
46.37
4.17
6728
7043
0.041312
GGGCTACAATATGCGCAACG
60.041
55.000
17.11
5.59
41.00
4.10
6729
7044
0.655733
GGCTACAATATGCGCAACGT
59.344
50.000
17.11
11.91
0.00
3.99
6730
7045
1.332904
GGCTACAATATGCGCAACGTC
60.333
52.381
17.11
0.00
0.00
4.34
6731
7046
1.593006
GCTACAATATGCGCAACGTCT
59.407
47.619
17.11
0.00
0.00
4.18
6732
7047
2.792674
GCTACAATATGCGCAACGTCTA
59.207
45.455
17.11
1.03
0.00
2.59
6733
7048
3.121328
GCTACAATATGCGCAACGTCTAG
60.121
47.826
17.11
11.96
0.00
2.43
6734
7049
2.888594
ACAATATGCGCAACGTCTAGT
58.111
42.857
17.11
4.12
0.00
2.57
6735
7050
4.036567
ACAATATGCGCAACGTCTAGTA
57.963
40.909
17.11
0.00
0.00
1.82
6736
7051
4.426416
ACAATATGCGCAACGTCTAGTAA
58.574
39.130
17.11
0.00
0.00
2.24
6737
7052
4.865925
ACAATATGCGCAACGTCTAGTAAA
59.134
37.500
17.11
0.00
0.00
2.01
6738
7053
5.349270
ACAATATGCGCAACGTCTAGTAAAA
59.651
36.000
17.11
0.00
0.00
1.52
6739
7054
3.991605
ATGCGCAACGTCTAGTAAAAG
57.008
42.857
17.11
0.00
0.00
2.27
6740
7055
2.063266
TGCGCAACGTCTAGTAAAAGG
58.937
47.619
8.16
0.00
0.00
3.11
6741
7056
2.288334
TGCGCAACGTCTAGTAAAAGGA
60.288
45.455
8.16
0.00
0.00
3.36
6742
7057
2.344741
GCGCAACGTCTAGTAAAAGGAG
59.655
50.000
0.30
0.00
0.00
3.69
6743
7058
3.829948
CGCAACGTCTAGTAAAAGGAGA
58.170
45.455
0.00
0.00
0.00
3.71
6744
7059
3.607209
CGCAACGTCTAGTAAAAGGAGAC
59.393
47.826
0.00
0.00
36.95
3.36
6749
7064
3.509740
GTCTAGTAAAAGGAGACGTGCC
58.490
50.000
0.00
0.00
31.01
5.01
6750
7065
3.057033
GTCTAGTAAAAGGAGACGTGCCA
60.057
47.826
0.00
0.00
31.01
4.92
6751
7066
2.165319
AGTAAAAGGAGACGTGCCAC
57.835
50.000
0.00
0.00
0.00
5.01
6752
7067
1.414919
AGTAAAAGGAGACGTGCCACA
59.585
47.619
0.00
0.00
0.00
4.17
6753
7068
2.158871
AGTAAAAGGAGACGTGCCACAA
60.159
45.455
0.00
0.00
0.00
3.33
6754
7069
1.308998
AAAAGGAGACGTGCCACAAG
58.691
50.000
0.00
0.00
0.00
3.16
6755
7070
0.180406
AAAGGAGACGTGCCACAAGT
59.820
50.000
0.00
0.00
0.00
3.16
6756
7071
0.180406
AAGGAGACGTGCCACAAGTT
59.820
50.000
0.00
0.00
0.00
2.66
6757
7072
1.045407
AGGAGACGTGCCACAAGTTA
58.955
50.000
0.00
0.00
0.00
2.24
6758
7073
1.000955
AGGAGACGTGCCACAAGTTAG
59.999
52.381
0.00
0.00
0.00
2.34
6759
7074
0.790814
GAGACGTGCCACAAGTTAGC
59.209
55.000
0.00
0.00
0.00
3.09
6760
7075
0.393077
AGACGTGCCACAAGTTAGCT
59.607
50.000
0.00
0.00
0.00
3.32
6761
7076
0.512952
GACGTGCCACAAGTTAGCTG
59.487
55.000
0.00
0.00
0.00
4.24
6762
7077
1.207593
CGTGCCACAAGTTAGCTGC
59.792
57.895
0.00
0.00
0.00
5.25
6763
7078
1.207593
GTGCCACAAGTTAGCTGCG
59.792
57.895
0.00
0.00
0.00
5.18
6764
7079
1.965930
TGCCACAAGTTAGCTGCGG
60.966
57.895
0.00
0.00
0.00
5.69
6765
7080
1.966451
GCCACAAGTTAGCTGCGGT
60.966
57.895
0.00
0.00
0.00
5.68
6766
7081
1.912371
GCCACAAGTTAGCTGCGGTC
61.912
60.000
0.00
0.00
0.00
4.79
6767
7082
1.298859
CCACAAGTTAGCTGCGGTCC
61.299
60.000
0.00
0.00
0.00
4.46
6768
7083
0.602638
CACAAGTTAGCTGCGGTCCA
60.603
55.000
0.00
0.00
0.00
4.02
6769
7084
0.324943
ACAAGTTAGCTGCGGTCCAT
59.675
50.000
0.00
0.00
0.00
3.41
6770
7085
1.009829
CAAGTTAGCTGCGGTCCATC
58.990
55.000
0.00
0.00
0.00
3.51
6771
7086
0.905357
AAGTTAGCTGCGGTCCATCT
59.095
50.000
0.00
0.00
0.00
2.90
6772
7087
1.776662
AGTTAGCTGCGGTCCATCTA
58.223
50.000
0.00
0.00
0.00
1.98
6773
7088
1.683917
AGTTAGCTGCGGTCCATCTAG
59.316
52.381
0.00
0.00
0.00
2.43
6774
7089
1.409427
GTTAGCTGCGGTCCATCTAGT
59.591
52.381
0.00
0.00
0.00
2.57
6775
7090
1.032794
TAGCTGCGGTCCATCTAGTG
58.967
55.000
0.00
0.00
0.00
2.74
6776
7091
0.972983
AGCTGCGGTCCATCTAGTGT
60.973
55.000
0.00
0.00
0.00
3.55
6777
7092
0.108138
GCTGCGGTCCATCTAGTGTT
60.108
55.000
0.00
0.00
0.00
3.32
6778
7093
1.645034
CTGCGGTCCATCTAGTGTTG
58.355
55.000
0.00
0.00
0.00
3.33
6779
7094
0.391130
TGCGGTCCATCTAGTGTTGC
60.391
55.000
0.00
0.00
0.00
4.17
6780
7095
0.108138
GCGGTCCATCTAGTGTTGCT
60.108
55.000
0.00
0.00
0.00
3.91
6781
7096
1.645034
CGGTCCATCTAGTGTTGCTG
58.355
55.000
0.00
0.00
0.00
4.41
6782
7097
1.740380
CGGTCCATCTAGTGTTGCTGG
60.740
57.143
0.00
0.00
0.00
4.85
6783
7098
1.373570
GTCCATCTAGTGTTGCTGGC
58.626
55.000
0.00
0.00
0.00
4.85
6784
7099
1.065854
GTCCATCTAGTGTTGCTGGCT
60.066
52.381
0.00
0.00
0.00
4.75
6785
7100
1.630369
TCCATCTAGTGTTGCTGGCTT
59.370
47.619
0.00
0.00
0.00
4.35
6786
7101
2.012673
CCATCTAGTGTTGCTGGCTTC
58.987
52.381
0.00
0.00
0.00
3.86
6787
7102
2.616256
CCATCTAGTGTTGCTGGCTTCA
60.616
50.000
0.00
0.00
0.00
3.02
6788
7103
2.169832
TCTAGTGTTGCTGGCTTCAC
57.830
50.000
10.59
10.59
0.00
3.18
6789
7104
1.694150
TCTAGTGTTGCTGGCTTCACT
59.306
47.619
19.35
19.35
42.56
3.41
6790
7105
2.897326
TCTAGTGTTGCTGGCTTCACTA
59.103
45.455
19.46
19.46
40.77
2.74
6791
7106
2.175878
AGTGTTGCTGGCTTCACTAG
57.824
50.000
16.16
0.00
39.01
2.57
6800
7115
2.116383
GCTTCACTAGCGGGCTAGA
58.884
57.895
29.03
9.66
46.56
2.43
6801
7116
0.460311
GCTTCACTAGCGGGCTAGAA
59.540
55.000
29.03
15.69
46.56
2.10
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
239
242
7.330262
TCTTAGATCTGCACACATATGTTCAA
58.670
34.615
5.37
0.00
36.72
2.69
1471
1501
3.317993
GGACACAACCAACAGTAGCAAAT
59.682
43.478
0.00
0.00
0.00
2.32
3753
4000
1.828595
TCTAGGTAATCCACTGCGCAA
59.171
47.619
13.05
0.00
35.89
4.85
3936
4202
5.481824
TGAGAGGCATATGAATTATCTCGGT
59.518
40.000
6.97
0.00
35.56
4.69
4207
4484
7.512130
TCATTAGCTCCATCACATCACTATTT
58.488
34.615
0.00
0.00
0.00
1.40
4570
4847
9.793252
CAAATACTGAAGCACATATTTTTAGCT
57.207
29.630
0.00
0.00
37.08
3.32
4662
4939
7.042791
GGTTATTGCATGGTATGGAAAATTTCG
60.043
37.037
0.00
0.00
43.81
3.46
6294
6609
6.173339
CACCACTTCTTTGCCTATTCTTAGA
58.827
40.000
0.00
0.00
0.00
2.10
6295
6610
5.163713
GCACCACTTCTTTGCCTATTCTTAG
60.164
44.000
0.00
0.00
0.00
2.18
6296
6611
4.700213
GCACCACTTCTTTGCCTATTCTTA
59.300
41.667
0.00
0.00
0.00
2.10
6297
6612
3.507622
GCACCACTTCTTTGCCTATTCTT
59.492
43.478
0.00
0.00
0.00
2.52
6298
6613
3.084786
GCACCACTTCTTTGCCTATTCT
58.915
45.455
0.00
0.00
0.00
2.40
6299
6614
3.494045
GCACCACTTCTTTGCCTATTC
57.506
47.619
0.00
0.00
0.00
1.75
6305
6620
1.000938
CTTCTGGCACCACTTCTTTGC
60.001
52.381
0.00
0.00
35.40
3.68
6306
6621
2.291741
GACTTCTGGCACCACTTCTTTG
59.708
50.000
0.00
0.00
0.00
2.77
6307
6622
2.576615
GACTTCTGGCACCACTTCTTT
58.423
47.619
0.00
0.00
0.00
2.52
6308
6623
1.202818
GGACTTCTGGCACCACTTCTT
60.203
52.381
0.00
0.00
0.00
2.52
6309
6624
0.398318
GGACTTCTGGCACCACTTCT
59.602
55.000
0.00
0.00
0.00
2.85
6310
6625
0.108585
TGGACTTCTGGCACCACTTC
59.891
55.000
0.00
0.00
0.00
3.01
6311
6626
0.179018
GTGGACTTCTGGCACCACTT
60.179
55.000
14.93
0.00
46.14
3.16
6312
6627
1.451936
GTGGACTTCTGGCACCACT
59.548
57.895
14.93
0.00
46.14
4.00
6313
6628
1.961277
CGTGGACTTCTGGCACCAC
60.961
63.158
12.80
12.80
46.16
4.16
6314
6629
2.137528
TCGTGGACTTCTGGCACCA
61.138
57.895
0.00
0.00
0.00
4.17
6315
6630
1.668151
GTCGTGGACTTCTGGCACC
60.668
63.158
0.00
0.00
0.00
5.01
6316
6631
1.069090
TGTCGTGGACTTCTGGCAC
59.931
57.895
0.00
0.00
33.15
5.01
6317
6632
1.069090
GTGTCGTGGACTTCTGGCA
59.931
57.895
0.00
0.00
33.15
4.92
6318
6633
0.531974
TTGTGTCGTGGACTTCTGGC
60.532
55.000
0.00
0.00
33.15
4.85
6319
6634
1.502231
CTTGTGTCGTGGACTTCTGG
58.498
55.000
0.00
0.00
33.15
3.86
6320
6635
1.502231
CCTTGTGTCGTGGACTTCTG
58.498
55.000
0.00
0.00
33.15
3.02
6321
6636
0.249911
GCCTTGTGTCGTGGACTTCT
60.250
55.000
0.00
0.00
33.15
2.85
6322
6637
1.557443
CGCCTTGTGTCGTGGACTTC
61.557
60.000
0.00
0.00
33.15
3.01
6323
6638
1.594293
CGCCTTGTGTCGTGGACTT
60.594
57.895
0.00
0.00
33.15
3.01
6324
6639
2.029073
CGCCTTGTGTCGTGGACT
59.971
61.111
0.00
0.00
33.15
3.85
6325
6640
2.279918
ACGCCTTGTGTCGTGGAC
60.280
61.111
0.00
0.00
37.55
4.02
6334
6649
0.036732
ACCACATCATCACGCCTTGT
59.963
50.000
0.00
0.00
0.00
3.16
6335
6650
0.729116
GACCACATCATCACGCCTTG
59.271
55.000
0.00
0.00
0.00
3.61
6336
6651
0.324614
TGACCACATCATCACGCCTT
59.675
50.000
0.00
0.00
29.99
4.35
6337
6652
0.543277
ATGACCACATCATCACGCCT
59.457
50.000
0.00
0.00
45.52
5.52
6338
6653
0.659427
CATGACCACATCATCACGCC
59.341
55.000
0.00
0.00
45.52
5.68
6339
6654
0.028505
GCATGACCACATCATCACGC
59.971
55.000
0.00
0.00
45.52
5.34
6340
6655
1.660167
AGCATGACCACATCATCACG
58.340
50.000
0.00
0.00
45.52
4.35
6341
6656
4.063998
TCTAGCATGACCACATCATCAC
57.936
45.455
0.00
0.00
45.52
3.06
6342
6657
4.700700
CTTCTAGCATGACCACATCATCA
58.299
43.478
0.00
0.00
45.52
3.07
6343
6658
3.497640
GCTTCTAGCATGACCACATCATC
59.502
47.826
0.00
0.00
45.52
2.92
6345
6660
2.910199
GCTTCTAGCATGACCACATCA
58.090
47.619
0.00
0.00
41.89
3.07
6353
6668
7.235933
CATGTCATCATCTGCTTCTAGCATGA
61.236
42.308
0.00
4.79
42.35
3.07
6354
6669
5.106908
CATGTCATCATCTGCTTCTAGCATG
60.107
44.000
1.32
0.00
40.47
4.06
6355
6670
4.998033
CATGTCATCATCTGCTTCTAGCAT
59.002
41.667
1.32
0.00
40.47
3.79
6356
6671
4.377897
CATGTCATCATCTGCTTCTAGCA
58.622
43.478
0.98
0.98
39.61
3.49
6357
6672
3.747010
CCATGTCATCATCTGCTTCTAGC
59.253
47.826
0.00
0.00
35.31
3.42
6358
6673
3.747010
GCCATGTCATCATCTGCTTCTAG
59.253
47.826
0.00
0.00
31.15
2.43
6359
6674
3.736720
GCCATGTCATCATCTGCTTCTA
58.263
45.455
0.00
0.00
31.15
2.10
6360
6675
2.573369
GCCATGTCATCATCTGCTTCT
58.427
47.619
0.00
0.00
31.15
2.85
6361
6676
1.263484
CGCCATGTCATCATCTGCTTC
59.737
52.381
0.00
0.00
31.15
3.86
6362
6677
1.306148
CGCCATGTCATCATCTGCTT
58.694
50.000
0.00
0.00
31.15
3.91
6363
6678
1.164662
GCGCCATGTCATCATCTGCT
61.165
55.000
0.00
0.00
31.15
4.24
6364
6679
1.281960
GCGCCATGTCATCATCTGC
59.718
57.895
0.00
0.00
31.15
4.26
6365
6680
0.816421
TGGCGCCATGTCATCATCTG
60.816
55.000
29.03
0.00
31.15
2.90
6366
6681
0.534427
CTGGCGCCATGTCATCATCT
60.534
55.000
32.87
0.00
31.15
2.90
6367
6682
0.533531
TCTGGCGCCATGTCATCATC
60.534
55.000
32.87
0.00
31.15
2.92
6368
6683
0.107066
TTCTGGCGCCATGTCATCAT
60.107
50.000
32.87
0.00
34.21
2.45
6369
6684
1.026182
GTTCTGGCGCCATGTCATCA
61.026
55.000
32.87
3.62
0.00
3.07
6370
6685
0.745845
AGTTCTGGCGCCATGTCATC
60.746
55.000
32.87
16.65
0.00
2.92
6371
6686
0.745845
GAGTTCTGGCGCCATGTCAT
60.746
55.000
32.87
15.47
0.00
3.06
6372
6687
1.375908
GAGTTCTGGCGCCATGTCA
60.376
57.895
32.87
11.76
0.00
3.58
6373
6688
2.109126
GGAGTTCTGGCGCCATGTC
61.109
63.158
32.87
22.26
0.00
3.06
6374
6689
2.045926
GGAGTTCTGGCGCCATGT
60.046
61.111
32.87
14.95
0.00
3.21
6375
6690
2.046023
TGGAGTTCTGGCGCCATG
60.046
61.111
32.87
23.39
33.45
3.66
6376
6691
1.264749
TAGTGGAGTTCTGGCGCCAT
61.265
55.000
32.87
16.30
40.29
4.40
6377
6692
1.911269
TAGTGGAGTTCTGGCGCCA
60.911
57.895
30.59
30.59
35.99
5.69
6378
6693
1.448013
GTAGTGGAGTTCTGGCGCC
60.448
63.158
22.73
22.73
0.00
6.53
6379
6694
1.014564
GTGTAGTGGAGTTCTGGCGC
61.015
60.000
0.00
0.00
0.00
6.53
6380
6695
0.317160
TGTGTAGTGGAGTTCTGGCG
59.683
55.000
0.00
0.00
0.00
5.69
6381
6696
2.417719
CTTGTGTAGTGGAGTTCTGGC
58.582
52.381
0.00
0.00
0.00
4.85
6382
6697
2.872038
GCCTTGTGTAGTGGAGTTCTGG
60.872
54.545
0.00
0.00
0.00
3.86
6383
6698
2.417719
GCCTTGTGTAGTGGAGTTCTG
58.582
52.381
0.00
0.00
0.00
3.02
6384
6699
1.000955
CGCCTTGTGTAGTGGAGTTCT
59.999
52.381
0.00
0.00
0.00
3.01
6385
6700
1.429463
CGCCTTGTGTAGTGGAGTTC
58.571
55.000
0.00
0.00
0.00
3.01
6386
6701
0.034896
CCGCCTTGTGTAGTGGAGTT
59.965
55.000
0.00
0.00
0.00
3.01
6387
6702
0.830444
TCCGCCTTGTGTAGTGGAGT
60.830
55.000
0.00
0.00
0.00
3.85
6388
6703
0.389948
GTCCGCCTTGTGTAGTGGAG
60.390
60.000
0.00
0.00
29.85
3.86
6389
6704
1.669440
GTCCGCCTTGTGTAGTGGA
59.331
57.895
0.00
0.00
0.00
4.02
6390
6705
1.375523
GGTCCGCCTTGTGTAGTGG
60.376
63.158
0.00
0.00
0.00
4.00
6391
6706
1.736645
CGGTCCGCCTTGTGTAGTG
60.737
63.158
0.00
0.00
0.00
2.74
6392
6707
1.904865
TCGGTCCGCCTTGTGTAGT
60.905
57.895
6.34
0.00
0.00
2.73
6393
6708
1.445582
GTCGGTCCGCCTTGTGTAG
60.446
63.158
6.34
0.00
0.00
2.74
6394
6709
2.652530
GTCGGTCCGCCTTGTGTA
59.347
61.111
6.34
0.00
0.00
2.90
6395
6710
4.657824
CGTCGGTCCGCCTTGTGT
62.658
66.667
6.34
0.00
0.00
3.72
6396
6711
4.657824
ACGTCGGTCCGCCTTGTG
62.658
66.667
6.34
0.00
0.00
3.33
6397
6712
4.657824
CACGTCGGTCCGCCTTGT
62.658
66.667
6.34
0.00
0.00
3.16
6407
6722
2.709125
TTCTGGCAGAACCACGTCGG
62.709
60.000
25.38
2.92
46.36
4.79
6408
6723
1.284982
CTTCTGGCAGAACCACGTCG
61.285
60.000
25.38
10.61
46.36
5.12
6409
6724
0.033504
TCTTCTGGCAGAACCACGTC
59.966
55.000
25.38
0.00
46.36
4.34
6410
6725
0.249911
GTCTTCTGGCAGAACCACGT
60.250
55.000
25.38
0.00
46.36
4.49
6411
6726
0.951040
GGTCTTCTGGCAGAACCACG
60.951
60.000
26.28
17.53
46.36
4.94
6412
6727
0.108585
TGGTCTTCTGGCAGAACCAC
59.891
55.000
28.82
24.05
46.36
4.16
6414
6729
1.072331
TCTTGGTCTTCTGGCAGAACC
59.928
52.381
25.38
25.20
39.84
3.62
6415
6730
2.147150
GTCTTGGTCTTCTGGCAGAAC
58.853
52.381
25.38
17.40
29.89
3.01
6416
6731
1.270305
CGTCTTGGTCTTCTGGCAGAA
60.270
52.381
27.01
27.01
32.50
3.02
6417
6732
0.318441
CGTCTTGGTCTTCTGGCAGA
59.682
55.000
14.43
14.43
0.00
4.26
6418
6733
1.294659
GCGTCTTGGTCTTCTGGCAG
61.295
60.000
8.58
8.58
0.00
4.85
6419
6734
1.301716
GCGTCTTGGTCTTCTGGCA
60.302
57.895
0.00
0.00
0.00
4.92
6420
6735
2.383527
CGCGTCTTGGTCTTCTGGC
61.384
63.158
0.00
0.00
0.00
4.85
6421
6736
2.383527
GCGCGTCTTGGTCTTCTGG
61.384
63.158
8.43
0.00
0.00
3.86
6422
6737
1.621301
CTGCGCGTCTTGGTCTTCTG
61.621
60.000
8.43
0.00
0.00
3.02
6423
6738
1.373497
CTGCGCGTCTTGGTCTTCT
60.373
57.895
8.43
0.00
0.00
2.85
6424
6739
3.016474
GCTGCGCGTCTTGGTCTTC
62.016
63.158
8.43
0.00
0.00
2.87
6425
6740
3.044305
GCTGCGCGTCTTGGTCTT
61.044
61.111
8.43
0.00
0.00
3.01
6436
6751
3.323136
CGACATACCTCGCTGCGC
61.323
66.667
18.65
0.00
0.00
6.09
6443
6758
1.008309
GCTCCGAGCGACATACCTC
60.008
63.158
4.23
0.00
0.00
3.85
6444
6759
1.320344
TTGCTCCGAGCGACATACCT
61.320
55.000
15.58
0.00
46.26
3.08
6445
6760
0.459585
TTTGCTCCGAGCGACATACC
60.460
55.000
15.58
0.00
46.26
2.73
6446
6761
0.645868
GTTTGCTCCGAGCGACATAC
59.354
55.000
15.58
5.63
46.26
2.39
6447
6762
0.800683
CGTTTGCTCCGAGCGACATA
60.801
55.000
20.30
2.77
46.26
2.29
6448
6763
2.094659
CGTTTGCTCCGAGCGACAT
61.095
57.895
20.30
0.00
46.26
3.06
6449
6764
2.733218
CGTTTGCTCCGAGCGACA
60.733
61.111
20.30
7.59
46.26
4.35
6450
6765
2.430244
TCGTTTGCTCCGAGCGAC
60.430
61.111
15.58
14.58
46.26
5.19
6451
6766
2.430244
GTCGTTTGCTCCGAGCGA
60.430
61.111
15.58
11.16
46.26
4.93
6452
6767
3.827784
CGTCGTTTGCTCCGAGCG
61.828
66.667
15.58
1.42
46.26
5.03
6453
6768
3.479269
CCGTCGTTTGCTCCGAGC
61.479
66.667
13.81
13.81
42.82
5.03
6454
6769
2.049433
ACCGTCGTTTGCTCCGAG
60.049
61.111
0.00
0.00
34.56
4.63
6455
6770
2.355363
CACCGTCGTTTGCTCCGA
60.355
61.111
0.00
0.00
0.00
4.55
6456
6771
3.411351
CCACCGTCGTTTGCTCCG
61.411
66.667
0.00
0.00
0.00
4.63
6457
6772
3.723348
GCCACCGTCGTTTGCTCC
61.723
66.667
0.00
0.00
0.00
4.70
6458
6773
1.017177
TATGCCACCGTCGTTTGCTC
61.017
55.000
0.00
0.00
0.00
4.26
6459
6774
0.392461
ATATGCCACCGTCGTTTGCT
60.392
50.000
0.00
0.00
0.00
3.91
6460
6775
1.004292
GTATATGCCACCGTCGTTTGC
60.004
52.381
0.00
0.00
0.00
3.68
6461
6776
2.029970
GTGTATATGCCACCGTCGTTTG
59.970
50.000
0.00
0.00
0.00
2.93
6462
6777
2.273557
GTGTATATGCCACCGTCGTTT
58.726
47.619
0.00
0.00
0.00
3.60
6463
6778
1.205179
TGTGTATATGCCACCGTCGTT
59.795
47.619
5.27
0.00
31.71
3.85
6464
6779
0.818938
TGTGTATATGCCACCGTCGT
59.181
50.000
5.27
0.00
31.71
4.34
6465
6780
1.929230
TTGTGTATATGCCACCGTCG
58.071
50.000
5.27
0.00
31.71
5.12
6466
6781
2.032030
GCATTGTGTATATGCCACCGTC
60.032
50.000
0.00
0.00
41.94
4.79
6467
6782
1.946768
GCATTGTGTATATGCCACCGT
59.053
47.619
0.00
0.00
41.94
4.83
6468
6783
1.946081
TGCATTGTGTATATGCCACCG
59.054
47.619
5.47
0.00
46.05
4.94
6469
6784
4.300803
CAATGCATTGTGTATATGCCACC
58.699
43.478
27.81
0.00
46.05
4.61
6493
6808
1.221414
CCATCGAGCGGAGAAATTCC
58.779
55.000
0.00
0.00
43.04
3.01
6494
6809
0.583917
GCCATCGAGCGGAGAAATTC
59.416
55.000
7.83
0.00
0.00
2.17
6495
6810
0.179000
AGCCATCGAGCGGAGAAATT
59.821
50.000
7.83
0.00
38.01
1.82
6496
6811
0.249657
GAGCCATCGAGCGGAGAAAT
60.250
55.000
7.83
0.00
38.01
2.17
6497
6812
1.141881
GAGCCATCGAGCGGAGAAA
59.858
57.895
7.83
0.00
38.01
2.52
6498
6813
2.009424
CTGAGCCATCGAGCGGAGAA
62.009
60.000
7.83
0.00
38.01
2.87
6499
6814
2.440247
TGAGCCATCGAGCGGAGA
60.440
61.111
7.83
0.00
38.01
3.71
6500
6815
2.027314
CTGAGCCATCGAGCGGAG
59.973
66.667
7.83
0.00
38.01
4.63
6501
6816
4.212913
GCTGAGCCATCGAGCGGA
62.213
66.667
7.83
0.00
38.01
5.54
6503
6818
4.559229
TCGCTGAGCCATCGAGCG
62.559
66.667
6.29
6.29
45.84
5.03
6504
6819
2.657944
CTCGCTGAGCCATCGAGC
60.658
66.667
13.00
0.00
41.74
5.03
6523
6838
3.723348
GACTTGGTTGCCGGACGC
61.723
66.667
5.05
0.00
38.31
5.19
6524
6839
3.411351
CGACTTGGTTGCCGGACG
61.411
66.667
5.05
0.00
0.00
4.79
6525
6840
3.047877
CCGACTTGGTTGCCGGAC
61.048
66.667
5.05
0.00
44.29
4.79
6530
6845
4.389576
CAGCGCCGACTTGGTTGC
62.390
66.667
2.29
0.00
41.21
4.17
6531
6846
4.389576
GCAGCGCCGACTTGGTTG
62.390
66.667
2.29
0.00
41.21
3.77
6532
6847
4.927782
TGCAGCGCCGACTTGGTT
62.928
61.111
2.29
0.00
41.21
3.67
6533
6848
4.704833
ATGCAGCGCCGACTTGGT
62.705
61.111
2.29
0.00
41.21
3.67
6534
6849
4.170062
CATGCAGCGCCGACTTGG
62.170
66.667
2.29
0.00
42.50
3.61
6535
6850
4.824166
GCATGCAGCGCCGACTTG
62.824
66.667
14.21
3.52
0.00
3.16
6548
6863
3.826754
CTGCTGGCCTGCTGCATG
61.827
66.667
31.50
14.64
43.89
4.06
6552
6867
4.052229
GTTGCTGCTGGCCTGCTG
62.052
66.667
31.50
30.42
40.92
4.41
6556
6871
4.269523
TTCGGTTGCTGCTGGCCT
62.270
61.111
3.32
0.00
40.92
5.19
6557
6872
3.741476
CTTCGGTTGCTGCTGGCC
61.741
66.667
0.00
0.00
40.92
5.36
6558
6873
3.741476
CCTTCGGTTGCTGCTGGC
61.741
66.667
0.00
0.00
42.22
4.85
6559
6874
3.741476
GCCTTCGGTTGCTGCTGG
61.741
66.667
0.00
0.00
0.00
4.85
6560
6875
2.974489
CTGCCTTCGGTTGCTGCTG
61.974
63.158
0.00
0.00
0.00
4.41
6561
6876
2.670934
CTGCCTTCGGTTGCTGCT
60.671
61.111
0.00
0.00
0.00
4.24
6562
6877
4.410743
GCTGCCTTCGGTTGCTGC
62.411
66.667
0.00
0.00
43.48
5.25
6563
6878
2.974489
CTGCTGCCTTCGGTTGCTG
61.974
63.158
0.00
0.00
0.00
4.41
6564
6879
2.670934
CTGCTGCCTTCGGTTGCT
60.671
61.111
0.00
0.00
0.00
3.91
6565
6880
4.410743
GCTGCTGCCTTCGGTTGC
62.411
66.667
3.85
0.00
0.00
4.17
6566
6881
2.670934
AGCTGCTGCCTTCGGTTG
60.671
61.111
12.44
0.00
40.80
3.77
6567
6882
2.670934
CAGCTGCTGCCTTCGGTT
60.671
61.111
17.73
0.00
40.80
4.44
6576
6891
2.671177
GGTGTACGTGCAGCTGCTG
61.671
63.158
36.61
29.74
42.66
4.41
6577
6892
2.357517
GGTGTACGTGCAGCTGCT
60.358
61.111
36.61
21.18
42.66
4.24
6578
6893
3.777925
CGGTGTACGTGCAGCTGC
61.778
66.667
31.89
31.89
42.50
5.25
6579
6894
3.777925
GCGGTGTACGTGCAGCTG
61.778
66.667
28.54
22.69
46.52
4.24
6597
6912
3.629883
ATTGTGCATGCCAACGCCG
62.630
57.895
16.68
0.00
0.00
6.46
6598
6913
1.806758
GATTGTGCATGCCAACGCC
60.807
57.895
16.68
8.24
0.00
5.68
6599
6914
1.806758
GGATTGTGCATGCCAACGC
60.807
57.895
16.68
13.36
0.00
4.84
6600
6915
0.457166
CTGGATTGTGCATGCCAACG
60.457
55.000
16.68
5.38
0.00
4.10
6601
6916
0.604578
ACTGGATTGTGCATGCCAAC
59.395
50.000
16.68
8.33
0.00
3.77
6602
6917
0.604073
CACTGGATTGTGCATGCCAA
59.396
50.000
16.68
18.38
0.00
4.52
6603
6918
1.252215
CCACTGGATTGTGCATGCCA
61.252
55.000
16.68
10.08
36.68
4.92
6604
6919
0.966875
TCCACTGGATTGTGCATGCC
60.967
55.000
16.68
7.25
36.68
4.40
6605
6920
0.171903
GTCCACTGGATTGTGCATGC
59.828
55.000
11.82
11.82
36.68
4.06
6606
6921
1.536940
TGTCCACTGGATTGTGCATG
58.463
50.000
0.00
0.00
36.68
4.06
6607
6922
2.165167
CTTGTCCACTGGATTGTGCAT
58.835
47.619
0.00
0.00
36.68
3.96
6608
6923
1.608055
CTTGTCCACTGGATTGTGCA
58.392
50.000
0.00
0.00
36.68
4.57
6609
6924
0.242017
GCTTGTCCACTGGATTGTGC
59.758
55.000
0.00
0.78
36.68
4.57
6610
6925
0.883833
GGCTTGTCCACTGGATTGTG
59.116
55.000
0.00
0.00
37.66
3.33
6611
6926
0.606401
CGGCTTGTCCACTGGATTGT
60.606
55.000
0.00
0.00
32.73
2.71
6612
6927
1.308069
CCGGCTTGTCCACTGGATTG
61.308
60.000
0.00
0.00
33.88
2.67
6613
6928
1.002134
CCGGCTTGTCCACTGGATT
60.002
57.895
0.00
0.00
33.88
3.01
6614
6929
1.274703
ATCCGGCTTGTCCACTGGAT
61.275
55.000
0.00
0.00
45.03
3.41
6615
6930
1.918293
ATCCGGCTTGTCCACTGGA
60.918
57.895
0.00
0.00
45.28
3.86
6616
6931
1.746615
CATCCGGCTTGTCCACTGG
60.747
63.158
0.00
0.00
34.01
4.00
6617
6932
1.746615
CCATCCGGCTTGTCCACTG
60.747
63.158
0.00
0.00
34.01
3.66
6618
6933
2.224159
ACCATCCGGCTTGTCCACT
61.224
57.895
0.00
0.00
34.57
4.00
6619
6934
2.040544
CACCATCCGGCTTGTCCAC
61.041
63.158
0.00
0.00
34.57
4.02
6620
6935
2.350895
CACCATCCGGCTTGTCCA
59.649
61.111
0.00
0.00
34.57
4.02
6621
6936
2.438434
CCACCATCCGGCTTGTCC
60.438
66.667
0.00
0.00
34.57
4.02
6622
6937
2.040544
CACCACCATCCGGCTTGTC
61.041
63.158
0.00
0.00
34.57
3.18
6623
6938
2.034066
CACCACCATCCGGCTTGT
59.966
61.111
0.00
0.00
34.57
3.16
6624
6939
2.751436
CCACCACCATCCGGCTTG
60.751
66.667
0.00
0.00
34.57
4.01
6625
6940
4.740822
GCCACCACCATCCGGCTT
62.741
66.667
0.00
0.00
41.50
4.35
6636
6951
1.073025
CAGCTTGTAGTGGCCACCA
59.927
57.895
32.29
20.96
0.00
4.17
6637
6952
0.955919
GACAGCTTGTAGTGGCCACC
60.956
60.000
32.29
18.42
0.00
4.61
6638
6953
0.035458
AGACAGCTTGTAGTGGCCAC
59.965
55.000
29.22
29.22
0.00
5.01
6639
6954
0.035317
CAGACAGCTTGTAGTGGCCA
59.965
55.000
0.00
0.00
0.00
5.36
6640
6955
1.301677
GCAGACAGCTTGTAGTGGCC
61.302
60.000
0.00
0.00
41.15
5.36
6641
6956
0.603707
TGCAGACAGCTTGTAGTGGC
60.604
55.000
0.00
0.00
45.94
5.01
6642
6957
1.532868
GTTGCAGACAGCTTGTAGTGG
59.467
52.381
0.00
0.00
45.94
4.00
6643
6958
2.212652
TGTTGCAGACAGCTTGTAGTG
58.787
47.619
0.00
0.00
45.94
2.74
6644
6959
2.620251
TGTTGCAGACAGCTTGTAGT
57.380
45.000
0.00
0.00
45.94
2.73
6653
6968
1.227943
GGTGGAGCTGTTGCAGACA
60.228
57.895
0.00
0.00
42.74
3.41
6654
6969
0.819259
TTGGTGGAGCTGTTGCAGAC
60.819
55.000
0.00
0.00
42.74
3.51
6655
6970
0.819259
GTTGGTGGAGCTGTTGCAGA
60.819
55.000
0.00
0.00
42.74
4.26
6656
6971
1.656441
GTTGGTGGAGCTGTTGCAG
59.344
57.895
0.00
0.00
42.74
4.41
6657
6972
2.186160
CGTTGGTGGAGCTGTTGCA
61.186
57.895
0.00
0.00
42.74
4.08
6658
6973
1.845809
CTCGTTGGTGGAGCTGTTGC
61.846
60.000
0.00
0.00
40.05
4.17
6659
6974
2.238353
CTCGTTGGTGGAGCTGTTG
58.762
57.895
0.00
0.00
0.00
3.33
6660
6975
4.779475
CTCGTTGGTGGAGCTGTT
57.221
55.556
0.00
0.00
0.00
3.16
6665
6980
0.888619
TAGTGAGCTCGTTGGTGGAG
59.111
55.000
9.64
0.00
34.62
3.86
6666
6981
0.601558
GTAGTGAGCTCGTTGGTGGA
59.398
55.000
9.64
0.00
0.00
4.02
6667
6982
0.389948
GGTAGTGAGCTCGTTGGTGG
60.390
60.000
9.64
0.00
0.00
4.61
6668
6983
0.317160
TGGTAGTGAGCTCGTTGGTG
59.683
55.000
9.64
0.00
0.00
4.17
6669
6984
0.317479
GTGGTAGTGAGCTCGTTGGT
59.683
55.000
9.64
0.00
0.00
3.67
6670
6985
0.317160
TGTGGTAGTGAGCTCGTTGG
59.683
55.000
9.64
0.00
0.00
3.77
6671
6986
1.995484
CATGTGGTAGTGAGCTCGTTG
59.005
52.381
9.64
0.00
0.00
4.10
6672
6987
1.066858
CCATGTGGTAGTGAGCTCGTT
60.067
52.381
9.64
1.87
0.00
3.85
6673
6988
0.532573
CCATGTGGTAGTGAGCTCGT
59.467
55.000
9.64
0.96
0.00
4.18
6674
6989
0.817654
TCCATGTGGTAGTGAGCTCG
59.182
55.000
9.64
0.00
36.34
5.03
6675
6990
1.827969
ACTCCATGTGGTAGTGAGCTC
59.172
52.381
6.82
6.82
36.34
4.09
6676
6991
1.552337
CACTCCATGTGGTAGTGAGCT
59.448
52.381
18.64
0.00
41.56
4.09
6677
6992
2.009042
GCACTCCATGTGGTAGTGAGC
61.009
57.143
23.66
12.88
46.27
4.26
6678
6993
2.015736
GCACTCCATGTGGTAGTGAG
57.984
55.000
23.66
8.69
46.27
3.51
6685
7000
3.134623
TCCATTACTAGCACTCCATGTGG
59.865
47.826
0.00
0.00
46.27
4.17
6687
7002
4.202398
CCATCCATTACTAGCACTCCATGT
60.202
45.833
0.00
0.00
0.00
3.21
6688
7003
4.321718
CCATCCATTACTAGCACTCCATG
58.678
47.826
0.00
0.00
0.00
3.66
6689
7004
3.328931
CCCATCCATTACTAGCACTCCAT
59.671
47.826
0.00
0.00
0.00
3.41
6690
7005
2.705658
CCCATCCATTACTAGCACTCCA
59.294
50.000
0.00
0.00
0.00
3.86
6691
7006
2.551071
GCCCATCCATTACTAGCACTCC
60.551
54.545
0.00
0.00
0.00
3.85
6692
7007
2.370189
AGCCCATCCATTACTAGCACTC
59.630
50.000
0.00
0.00
0.00
3.51
6693
7008
2.412591
AGCCCATCCATTACTAGCACT
58.587
47.619
0.00
0.00
0.00
4.40
6694
7009
2.938956
AGCCCATCCATTACTAGCAC
57.061
50.000
0.00
0.00
0.00
4.40
6695
7010
3.313791
TGTAGCCCATCCATTACTAGCA
58.686
45.455
0.00
0.00
0.00
3.49
6696
7011
4.351874
TTGTAGCCCATCCATTACTAGC
57.648
45.455
0.00
0.00
0.00
3.42
6697
7012
6.540189
GCATATTGTAGCCCATCCATTACTAG
59.460
42.308
0.00
0.00
0.00
2.57
6698
7013
6.414732
GCATATTGTAGCCCATCCATTACTA
58.585
40.000
0.00
0.00
0.00
1.82
6699
7014
5.256474
GCATATTGTAGCCCATCCATTACT
58.744
41.667
0.00
0.00
0.00
2.24
6700
7015
4.094887
CGCATATTGTAGCCCATCCATTAC
59.905
45.833
0.00
0.00
0.00
1.89
6701
7016
4.260985
CGCATATTGTAGCCCATCCATTA
58.739
43.478
0.00
0.00
0.00
1.90
6702
7017
3.084039
CGCATATTGTAGCCCATCCATT
58.916
45.455
0.00
0.00
0.00
3.16
6703
7018
2.715046
CGCATATTGTAGCCCATCCAT
58.285
47.619
0.00
0.00
0.00
3.41
6704
7019
1.881925
GCGCATATTGTAGCCCATCCA
60.882
52.381
0.30
0.00
0.00
3.41
6705
7020
0.804989
GCGCATATTGTAGCCCATCC
59.195
55.000
0.30
0.00
0.00
3.51
6706
7021
1.522668
TGCGCATATTGTAGCCCATC
58.477
50.000
5.66
0.00
0.00
3.51
6707
7022
1.608590
GTTGCGCATATTGTAGCCCAT
59.391
47.619
12.75
0.00
0.00
4.00
6708
7023
1.021202
GTTGCGCATATTGTAGCCCA
58.979
50.000
12.75
0.00
0.00
5.36
6709
7024
0.041312
CGTTGCGCATATTGTAGCCC
60.041
55.000
12.75
0.00
0.00
5.19
6710
7025
0.655733
ACGTTGCGCATATTGTAGCC
59.344
50.000
12.75
0.00
0.00
3.93
6711
7026
1.593006
AGACGTTGCGCATATTGTAGC
59.407
47.619
12.75
0.00
0.00
3.58
6712
7027
4.042398
ACTAGACGTTGCGCATATTGTAG
58.958
43.478
12.75
12.58
0.00
2.74
6713
7028
4.036567
ACTAGACGTTGCGCATATTGTA
57.963
40.909
12.75
0.00
0.00
2.41
6714
7029
2.888594
ACTAGACGTTGCGCATATTGT
58.111
42.857
12.75
7.56
0.00
2.71
6715
7030
5.383984
TTTACTAGACGTTGCGCATATTG
57.616
39.130
12.75
3.79
0.00
1.90
6716
7031
5.006358
CCTTTTACTAGACGTTGCGCATATT
59.994
40.000
12.75
0.00
0.00
1.28
6717
7032
4.506654
CCTTTTACTAGACGTTGCGCATAT
59.493
41.667
12.75
0.00
0.00
1.78
6718
7033
3.861113
CCTTTTACTAGACGTTGCGCATA
59.139
43.478
12.75
0.00
0.00
3.14
6719
7034
2.671396
CCTTTTACTAGACGTTGCGCAT
59.329
45.455
12.75
0.00
0.00
4.73
6720
7035
2.063266
CCTTTTACTAGACGTTGCGCA
58.937
47.619
5.66
5.66
0.00
6.09
6721
7036
2.331194
TCCTTTTACTAGACGTTGCGC
58.669
47.619
0.00
0.00
0.00
6.09
6722
7037
3.607209
GTCTCCTTTTACTAGACGTTGCG
59.393
47.826
0.00
0.00
31.16
4.85
6728
7043
3.057033
TGGCACGTCTCCTTTTACTAGAC
60.057
47.826
0.00
0.00
36.99
2.59
6729
7044
3.057033
GTGGCACGTCTCCTTTTACTAGA
60.057
47.826
0.00
0.00
0.00
2.43
6730
7045
3.251571
GTGGCACGTCTCCTTTTACTAG
58.748
50.000
0.00
0.00
0.00
2.57
6731
7046
2.629137
TGTGGCACGTCTCCTTTTACTA
59.371
45.455
13.77
0.00
0.00
1.82
6732
7047
1.414919
TGTGGCACGTCTCCTTTTACT
59.585
47.619
13.77
0.00
0.00
2.24
6733
7048
1.873698
TGTGGCACGTCTCCTTTTAC
58.126
50.000
13.77
0.00
0.00
2.01
6734
7049
2.158871
ACTTGTGGCACGTCTCCTTTTA
60.159
45.455
13.77
0.00
0.00
1.52
6735
7050
1.308998
CTTGTGGCACGTCTCCTTTT
58.691
50.000
13.77
0.00
0.00
2.27
6736
7051
0.180406
ACTTGTGGCACGTCTCCTTT
59.820
50.000
13.77
0.00
0.00
3.11
6737
7052
0.180406
AACTTGTGGCACGTCTCCTT
59.820
50.000
13.77
0.00
0.00
3.36
6738
7053
1.000955
CTAACTTGTGGCACGTCTCCT
59.999
52.381
13.77
0.00
0.00
3.69
6739
7054
1.429463
CTAACTTGTGGCACGTCTCC
58.571
55.000
13.77
0.00
0.00
3.71
6740
7055
0.790814
GCTAACTTGTGGCACGTCTC
59.209
55.000
13.77
0.00
32.95
3.36
6741
7056
0.393077
AGCTAACTTGTGGCACGTCT
59.607
50.000
13.77
0.00
35.82
4.18
6742
7057
0.512952
CAGCTAACTTGTGGCACGTC
59.487
55.000
13.77
0.00
35.82
4.34
6743
7058
1.507141
GCAGCTAACTTGTGGCACGT
61.507
55.000
13.77
2.41
35.82
4.49
6744
7059
1.207593
GCAGCTAACTTGTGGCACG
59.792
57.895
13.77
1.69
35.82
5.34
6745
7060
1.207593
CGCAGCTAACTTGTGGCAC
59.792
57.895
11.55
11.55
35.82
5.01
6746
7061
1.965930
CCGCAGCTAACTTGTGGCA
60.966
57.895
0.00
0.00
39.15
4.92
6747
7062
2.870372
CCGCAGCTAACTTGTGGC
59.130
61.111
0.00
0.00
39.15
5.01
6749
7064
0.602638
TGGACCGCAGCTAACTTGTG
60.603
55.000
0.00
0.00
0.00
3.33
6750
7065
0.324943
ATGGACCGCAGCTAACTTGT
59.675
50.000
0.00
0.00
0.00
3.16
6751
7066
1.009829
GATGGACCGCAGCTAACTTG
58.990
55.000
0.00
0.00
0.00
3.16
6752
7067
0.905357
AGATGGACCGCAGCTAACTT
59.095
50.000
0.00
0.00
0.00
2.66
6753
7068
1.683917
CTAGATGGACCGCAGCTAACT
59.316
52.381
0.00
0.00
0.00
2.24
6754
7069
1.409427
ACTAGATGGACCGCAGCTAAC
59.591
52.381
0.00
0.00
0.00
2.34
6755
7070
1.409064
CACTAGATGGACCGCAGCTAA
59.591
52.381
0.00
0.00
0.00
3.09
6756
7071
1.032794
CACTAGATGGACCGCAGCTA
58.967
55.000
0.00
0.00
0.00
3.32
6757
7072
0.972983
ACACTAGATGGACCGCAGCT
60.973
55.000
0.00
0.00
0.00
4.24
6758
7073
0.108138
AACACTAGATGGACCGCAGC
60.108
55.000
0.00
0.00
0.00
5.25
6759
7074
1.645034
CAACACTAGATGGACCGCAG
58.355
55.000
0.00
0.00
0.00
5.18
6760
7075
0.391130
GCAACACTAGATGGACCGCA
60.391
55.000
0.00
0.00
0.00
5.69
6761
7076
0.108138
AGCAACACTAGATGGACCGC
60.108
55.000
0.00
0.00
0.00
5.68
6762
7077
1.645034
CAGCAACACTAGATGGACCG
58.355
55.000
0.00
0.00
0.00
4.79
6763
7078
2.014068
GCCAGCAACACTAGATGGACC
61.014
57.143
1.12
0.00
32.55
4.46
6764
7079
1.065854
AGCCAGCAACACTAGATGGAC
60.066
52.381
1.12
0.00
32.55
4.02
6765
7080
1.279496
AGCCAGCAACACTAGATGGA
58.721
50.000
1.12
0.00
32.55
3.41
6766
7081
2.012673
GAAGCCAGCAACACTAGATGG
58.987
52.381
0.00
0.00
0.00
3.51
6767
7082
2.417933
GTGAAGCCAGCAACACTAGATG
59.582
50.000
0.00
0.00
0.00
2.90
6768
7083
2.304180
AGTGAAGCCAGCAACACTAGAT
59.696
45.455
16.11
0.00
40.96
1.98
6769
7084
1.694150
AGTGAAGCCAGCAACACTAGA
59.306
47.619
16.11
0.00
40.96
2.43
6770
7085
2.175878
AGTGAAGCCAGCAACACTAG
57.824
50.000
16.11
0.00
40.96
2.57
6771
7086
2.612972
GCTAGTGAAGCCAGCAACACTA
60.613
50.000
19.70
19.70
46.25
2.74
6772
7087
1.879796
GCTAGTGAAGCCAGCAACACT
60.880
52.381
19.61
19.61
46.25
3.55
6773
7088
0.519077
GCTAGTGAAGCCAGCAACAC
59.481
55.000
9.93
9.93
46.25
3.32
6774
7089
2.932663
GCTAGTGAAGCCAGCAACA
58.067
52.632
0.00
0.00
46.25
3.33
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.