Multiple sequence alignment - TraesCS5A01G196800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G196800 chr5A 100.000 4319 0 0 1 4319 400572460 400576778 0.000000e+00 7976.0
1 TraesCS5A01G196800 chr5A 89.438 2386 189 25 980 3323 390244493 390242129 0.000000e+00 2952.0
2 TraesCS5A01G196800 chr5A 91.150 1243 63 9 2425 3655 400769942 400768735 0.000000e+00 1642.0
3 TraesCS5A01G196800 chr5A 92.906 733 44 5 1709 2437 400773700 400772972 0.000000e+00 1059.0
4 TraesCS5A01G196800 chr5A 91.601 631 51 2 1014 1643 400777642 400777013 0.000000e+00 870.0
5 TraesCS5A01G196800 chr5A 88.593 263 11 2 3809 4052 34841905 34842167 7.020000e-78 302.0
6 TraesCS5A01G196800 chr5A 90.909 198 12 4 160 355 390364703 390364510 1.190000e-65 261.0
7 TraesCS5A01G196800 chr5A 97.959 98 2 0 3659 3756 574780164 574780261 2.070000e-38 171.0
8 TraesCS5A01G196800 chr5A 91.228 114 10 0 3659 3772 415737593 415737480 5.780000e-34 156.0
9 TraesCS5A01G196800 chr5A 92.000 100 7 1 356 454 400778210 400778111 5.820000e-29 139.0
10 TraesCS5A01G196800 chr5A 89.706 68 4 1 4197 4264 342045714 342045650 2.770000e-12 84.2
11 TraesCS5A01G196800 chr5B 93.604 2705 129 19 978 3655 338959410 338962097 0.000000e+00 3997.0
12 TraesCS5A01G196800 chr5B 93.604 2705 129 19 978 3655 338964914 338967601 0.000000e+00 3997.0
13 TraesCS5A01G196800 chr5B 90.248 2625 160 44 978 3528 339288751 339286149 0.000000e+00 3341.0
14 TraesCS5A01G196800 chr5B 90.286 2100 150 11 1259 3323 352382591 352384671 0.000000e+00 2699.0
15 TraesCS5A01G196800 chr5B 91.098 1539 110 13 1980 3510 339080295 339078776 0.000000e+00 2058.0
16 TraesCS5A01G196800 chr5B 90.000 1090 60 21 634 1696 339090146 339089079 0.000000e+00 1363.0
17 TraesCS5A01G196800 chr5B 93.750 272 14 1 4051 4319 339078419 339078148 5.200000e-109 405.0
18 TraesCS5A01G196800 chr5B 84.146 410 36 12 160 557 352312479 352312871 1.900000e-98 370.0
19 TraesCS5A01G196800 chr5B 89.377 273 19 2 1006 1277 352381009 352381272 6.920000e-88 335.0
20 TraesCS5A01G196800 chr5B 85.985 264 18 13 3808 4053 655801483 655801221 9.210000e-67 265.0
21 TraesCS5A01G196800 chr5B 95.946 148 4 2 3510 3656 339078616 339078470 5.580000e-59 239.0
22 TraesCS5A01G196800 chr5B 79.228 337 38 15 223 551 352311654 352311966 5.660000e-49 206.0
23 TraesCS5A01G196800 chr5B 89.172 157 11 5 1014 1166 338957826 338957980 1.590000e-44 191.0
24 TraesCS5A01G196800 chr5B 83.146 178 13 12 797 971 338959196 338959359 3.480000e-31 147.0
25 TraesCS5A01G196800 chr5B 83.146 178 13 12 797 971 338964700 338964863 3.480000e-31 147.0
26 TraesCS5A01G196800 chr5B 94.231 52 1 2 3752 3802 339078472 339078422 1.290000e-10 78.7
27 TraesCS5A01G196800 chr5D 90.589 3071 168 44 634 3656 298142560 298145557 0.000000e+00 3958.0
28 TraesCS5A01G196800 chr5D 93.501 2631 150 12 1032 3655 298282376 298279760 0.000000e+00 3892.0
29 TraesCS5A01G196800 chr5D 90.292 2740 189 27 978 3655 307093364 307096088 0.000000e+00 3515.0
30 TraesCS5A01G196800 chr5D 90.885 2600 178 24 977 3528 298463530 298460942 0.000000e+00 3434.0
31 TraesCS5A01G196800 chr5D 88.947 380 24 11 3287 3655 307344283 307344655 1.830000e-123 453.0
32 TraesCS5A01G196800 chr5D 88.654 379 22 12 3287 3655 307184097 307184464 3.960000e-120 442.0
33 TraesCS5A01G196800 chr5D 95.203 271 11 2 4051 4319 298145608 298145878 1.110000e-115 427.0
34 TraesCS5A01G196800 chr5D 84.426 244 31 3 314 551 298141094 298141336 2.600000e-57 233.0
35 TraesCS5A01G196800 chr5D 85.572 201 19 8 361 552 298464081 298463882 7.320000e-48 202.0
36 TraesCS5A01G196800 chr5D 81.343 268 32 12 3809 4058 439227136 439226869 7.320000e-48 202.0
37 TraesCS5A01G196800 chr5D 83.420 193 25 5 364 551 298465856 298465666 5.740000e-39 172.0
38 TraesCS5A01G196800 chr5D 91.000 100 8 1 356 454 298282912 298282813 2.710000e-27 134.0
39 TraesCS5A01G196800 chr5D 82.692 104 13 4 3679 3780 213359423 213359523 2.140000e-13 87.9
40 TraesCS5A01G196800 chr5D 91.667 60 1 1 3752 3811 298145555 298145610 3.580000e-11 80.5
41 TraesCS5A01G196800 chr5D 97.778 45 1 0 927 971 298282539 298282495 1.290000e-10 78.7
42 TraesCS5A01G196800 chr5D 86.486 74 4 2 4199 4267 74430274 74430202 4.630000e-10 76.8
43 TraesCS5A01G196800 chr5D 92.000 50 4 0 4199 4248 392072088 392072137 2.150000e-08 71.3
44 TraesCS5A01G196800 chr4A 90.494 263 6 3 3809 4053 448887729 448887990 3.220000e-86 329.0
45 TraesCS5A01G196800 chr4A 97.059 102 2 1 3657 3757 356606539 356606438 2.070000e-38 171.0
46 TraesCS5A01G196800 chr4B 89.057 265 12 4 3809 4056 270860297 270860561 3.240000e-81 313.0
47 TraesCS5A01G196800 chr4B 85.306 245 32 2 3808 4052 634340553 634340793 2.580000e-62 250.0
48 TraesCS5A01G196800 chr4B 91.304 46 4 0 4199 4244 595236069 595236114 3.610000e-06 63.9
49 TraesCS5A01G196800 chr7A 88.476 269 11 4 3809 4059 314252200 314252466 1.510000e-79 307.0
50 TraesCS5A01G196800 chr7A 98.969 97 1 0 3659 3755 473023728 473023824 1.600000e-39 174.0
51 TraesCS5A01G196800 chr7A 97.938 97 2 0 3658 3754 89962378 89962474 7.430000e-38 169.0
52 TraesCS5A01G196800 chr7A 95.192 104 4 1 3659 3762 381253934 381254036 3.460000e-36 163.0
53 TraesCS5A01G196800 chr4D 88.168 262 14 5 3809 4053 3381091 3381352 3.270000e-76 296.0
54 TraesCS5A01G196800 chr4D 90.000 50 5 0 4195 4244 27383066 27383115 1.000000e-06 65.8
55 TraesCS5A01G196800 chr4D 97.297 37 1 0 4212 4248 3365277 3365313 3.610000e-06 63.9
56 TraesCS5A01G196800 chr4D 89.130 46 5 0 4199 4244 484187200 484187155 1.680000e-04 58.4
57 TraesCS5A01G196800 chr1B 88.168 262 14 6 3809 4053 591027615 591027876 3.270000e-76 296.0
58 TraesCS5A01G196800 chr3A 86.989 269 17 4 3808 4059 236683629 236683896 1.970000e-73 287.0
59 TraesCS5A01G196800 chr3A 85.317 252 25 10 3809 4052 746963489 746963242 2.580000e-62 250.0
60 TraesCS5A01G196800 chr3D 87.121 264 16 6 3807 4053 306028958 306029220 2.540000e-72 283.0
61 TraesCS5A01G196800 chr3D 97.959 98 2 0 3659 3756 463852305 463852402 2.070000e-38 171.0
62 TraesCS5A01G196800 chr3D 84.615 78 7 3 4199 4271 389261573 389261496 5.990000e-09 73.1
63 TraesCS5A01G196800 chr3D 100.000 28 0 0 4244 4271 59293781 59293754 8.000000e-03 52.8
64 TraesCS5A01G196800 chr1A 86.312 263 19 6 3807 4052 32555157 32555419 1.980000e-68 270.0
65 TraesCS5A01G196800 chr1A 97.938 97 2 0 3659 3755 587607398 587607302 7.430000e-38 169.0
66 TraesCS5A01G196800 chr1A 90.769 65 3 1 4199 4263 109577145 109577206 2.770000e-12 84.2
67 TraesCS5A01G196800 chr1A 95.918 49 2 0 4196 4244 505133895 505133943 3.580000e-11 80.5
68 TraesCS5A01G196800 chr1A 95.122 41 2 0 4199 4239 563172763 563172723 1.000000e-06 65.8
69 TraesCS5A01G196800 chr6D 81.452 248 36 7 3809 4052 5973545 5973786 1.230000e-45 195.0
70 TraesCS5A01G196800 chr6D 91.304 46 4 0 4199 4244 458995283 458995238 3.610000e-06 63.9
71 TraesCS5A01G196800 chr6D 97.143 35 1 0 4210 4244 423213871 423213837 4.660000e-05 60.2
72 TraesCS5A01G196800 chr6D 92.683 41 3 0 4199 4239 426293728 426293688 4.660000e-05 60.2
73 TraesCS5A01G196800 chr6D 89.130 46 5 0 4199 4244 14176312 14176357 1.680000e-04 58.4
74 TraesCS5A01G196800 chr6D 100.000 31 0 0 4214 4244 31481078 31481048 1.680000e-04 58.4
75 TraesCS5A01G196800 chr6D 89.130 46 5 0 4199 4244 414569581 414569626 1.680000e-04 58.4
76 TraesCS5A01G196800 chr6D 96.970 33 1 0 1604 1636 17320535 17320567 6.030000e-04 56.5
77 TraesCS5A01G196800 chr6A 97.959 98 2 0 3658 3755 603025466 603025369 2.070000e-38 171.0
78 TraesCS5A01G196800 chr6A 93.478 46 3 0 4199 4244 567724485 567724530 7.750000e-08 69.4
79 TraesCS5A01G196800 chr6A 91.304 46 4 0 4199 4244 54734634 54734589 3.610000e-06 63.9
80 TraesCS5A01G196800 chr6A 87.755 49 6 0 4196 4244 31744141 31744189 1.680000e-04 58.4
81 TraesCS5A01G196800 chr6A 96.970 33 1 0 1604 1636 17956686 17956718 6.030000e-04 56.5
82 TraesCS5A01G196800 chr2B 88.406 69 5 1 4199 4264 27088455 27088387 3.580000e-11 80.5
83 TraesCS5A01G196800 chr2B 92.453 53 3 1 4195 4246 597253008 597252956 1.670000e-09 75.0
84 TraesCS5A01G196800 chr3B 81.818 99 10 6 4168 4263 450848198 450848105 4.630000e-10 76.8
85 TraesCS5A01G196800 chr3B 91.071 56 4 1 575 630 250802393 250802339 1.670000e-09 75.0
86 TraesCS5A01G196800 chr7D 93.478 46 3 0 4199 4244 13329012 13329057 7.750000e-08 69.4
87 TraesCS5A01G196800 chr7D 87.719 57 6 1 4186 4241 58784482 58784426 1.000000e-06 65.8
88 TraesCS5A01G196800 chr1D 95.122 41 2 0 4199 4239 41987621 41987661 1.000000e-06 65.8
89 TraesCS5A01G196800 chr1D 100.000 31 0 0 4214 4244 456150227 456150257 1.680000e-04 58.4
90 TraesCS5A01G196800 chr1D 90.698 43 4 0 4199 4241 458731051 458731009 1.680000e-04 58.4
91 TraesCS5A01G196800 chr1D 88.636 44 5 0 4195 4238 480391927 480391884 2.000000e-03 54.7
92 TraesCS5A01G196800 chrUn 97.143 35 0 1 4210 4244 461112356 461112323 1.680000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G196800 chr5A 400572460 400576778 4318 False 7976.000000 7976 100.000000 1 4319 1 chr5A.!!$F2 4318
1 TraesCS5A01G196800 chr5A 390242129 390244493 2364 True 2952.000000 2952 89.438000 980 3323 1 chr5A.!!$R2 2343
2 TraesCS5A01G196800 chr5A 400768735 400778210 9475 True 927.500000 1642 91.914250 356 3655 4 chr5A.!!$R5 3299
3 TraesCS5A01G196800 chr5B 339286149 339288751 2602 True 3341.000000 3341 90.248000 978 3528 1 chr5B.!!$R2 2550
4 TraesCS5A01G196800 chr5B 338957826 338967601 9775 False 1695.800000 3997 88.534400 797 3655 5 chr5B.!!$F1 2858
5 TraesCS5A01G196800 chr5B 352381009 352384671 3662 False 1517.000000 2699 89.831500 1006 3323 2 chr5B.!!$F3 2317
6 TraesCS5A01G196800 chr5B 339089079 339090146 1067 True 1363.000000 1363 90.000000 634 1696 1 chr5B.!!$R1 1062
7 TraesCS5A01G196800 chr5B 339078148 339080295 2147 True 695.175000 2058 93.756250 1980 4319 4 chr5B.!!$R4 2339
8 TraesCS5A01G196800 chr5B 352311654 352312871 1217 False 288.000000 370 81.687000 160 557 2 chr5B.!!$F2 397
9 TraesCS5A01G196800 chr5D 307093364 307096088 2724 False 3515.000000 3515 90.292000 978 3655 1 chr5D.!!$F2 2677
10 TraesCS5A01G196800 chr5D 298279760 298282912 3152 True 1368.233333 3892 94.093000 356 3655 3 chr5D.!!$R3 3299
11 TraesCS5A01G196800 chr5D 298460942 298465856 4914 True 1269.333333 3434 86.625667 361 3528 3 chr5D.!!$R4 3167
12 TraesCS5A01G196800 chr5D 298141094 298145878 4784 False 1174.625000 3958 90.471250 314 4319 4 chr5D.!!$F6 4005

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
603 3809 0.036732 TTTGCTGTTCATCCGGAGCT 59.963 50.0 11.34 0.0 32.41 4.09 F
1084 9914 0.102120 CTGCTCCCTGCTACTTCTCG 59.898 60.0 0.00 0.0 43.37 4.04 F
1594 11774 1.272554 GGACTCCCCGGGATTCAACT 61.273 60.0 26.32 0.0 33.75 3.16 F
2770 19287 0.905357 CAAGAACGGGAGGGACATCT 59.095 55.0 0.00 0.0 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1594 11774 1.134753 CTTGTTGTTGCACAAGCTGGA 59.865 47.619 0.0 0.0 45.43 3.86 R
2760 19277 0.460987 CGCTGTCCAAGATGTCCCTC 60.461 60.000 0.0 0.0 0.00 4.30 R
2952 19469 2.328099 GCACTTGTTCAGCTCCGGG 61.328 63.158 0.0 0.0 0.00 5.73 R
3741 20492 0.408700 ACCAGTCTACTCCCTCCGTT 59.591 55.000 0.0 0.0 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.610040 TCGCATGGAAGATGTGTTAGT 57.390 42.857 0.00 0.00 0.00 2.24
23 24 4.682787 TCGCATGGAAGATGTGTTAGTAG 58.317 43.478 0.00 0.00 0.00 2.57
24 25 3.804325 CGCATGGAAGATGTGTTAGTAGG 59.196 47.826 0.00 0.00 0.00 3.18
25 26 4.441495 CGCATGGAAGATGTGTTAGTAGGA 60.441 45.833 0.00 0.00 0.00 2.94
26 27 5.428253 GCATGGAAGATGTGTTAGTAGGAA 58.572 41.667 0.00 0.00 0.00 3.36
27 28 5.880332 GCATGGAAGATGTGTTAGTAGGAAA 59.120 40.000 0.00 0.00 0.00 3.13
28 29 6.374333 GCATGGAAGATGTGTTAGTAGGAAAA 59.626 38.462 0.00 0.00 0.00 2.29
29 30 7.414540 GCATGGAAGATGTGTTAGTAGGAAAAG 60.415 40.741 0.00 0.00 0.00 2.27
30 31 7.311092 TGGAAGATGTGTTAGTAGGAAAAGA 57.689 36.000 0.00 0.00 0.00 2.52
31 32 7.918076 TGGAAGATGTGTTAGTAGGAAAAGAT 58.082 34.615 0.00 0.00 0.00 2.40
32 33 8.383175 TGGAAGATGTGTTAGTAGGAAAAGATT 58.617 33.333 0.00 0.00 0.00 2.40
33 34 9.232473 GGAAGATGTGTTAGTAGGAAAAGATTT 57.768 33.333 0.00 0.00 0.00 2.17
44 45 7.312899 AGTAGGAAAAGATTTAAATGGTTGCG 58.687 34.615 5.17 0.00 0.00 4.85
46 47 4.201580 GGAAAAGATTTAAATGGTTGCGCG 60.202 41.667 5.17 0.00 0.00 6.86
47 48 1.908065 AGATTTAAATGGTTGCGCGC 58.092 45.000 27.26 27.26 0.00 6.86
48 49 1.472480 AGATTTAAATGGTTGCGCGCT 59.528 42.857 33.29 12.72 0.00 5.92
49 50 1.846175 GATTTAAATGGTTGCGCGCTC 59.154 47.619 33.29 23.57 0.00 5.03
50 51 0.453615 TTTAAATGGTTGCGCGCTCG 60.454 50.000 33.29 0.00 39.07 5.03
51 52 1.570347 TTAAATGGTTGCGCGCTCGT 61.570 50.000 33.29 19.20 38.14 4.18
52 53 1.570347 TAAATGGTTGCGCGCTCGTT 61.570 50.000 33.29 23.46 38.14 3.85
53 54 1.570347 AAATGGTTGCGCGCTCGTTA 61.570 50.000 33.29 14.98 38.14 3.18
54 55 1.570347 AATGGTTGCGCGCTCGTTAA 61.570 50.000 33.29 15.19 38.14 2.01
55 56 1.966493 ATGGTTGCGCGCTCGTTAAG 61.966 55.000 33.29 0.00 38.14 1.85
56 57 2.664436 GGTTGCGCGCTCGTTAAGT 61.664 57.895 33.29 0.00 38.14 2.24
57 58 1.203313 GTTGCGCGCTCGTTAAGTT 59.797 52.632 33.29 0.00 38.14 2.66
59 60 0.305313 TTGCGCGCTCGTTAAGTTTT 59.695 45.000 33.29 0.00 38.14 2.43
60 61 0.111001 TGCGCGCTCGTTAAGTTTTC 60.111 50.000 33.29 0.00 38.14 2.29
61 62 0.163146 GCGCGCTCGTTAAGTTTTCT 59.837 50.000 26.67 0.00 38.14 2.52
63 64 2.222624 CGCGCTCGTTAAGTTTTCTTG 58.777 47.619 5.56 0.00 40.70 3.02
64 65 2.097104 CGCGCTCGTTAAGTTTTCTTGA 60.097 45.455 5.56 0.00 40.70 3.02
65 66 3.216031 GCGCTCGTTAAGTTTTCTTGAC 58.784 45.455 0.00 0.00 41.20 3.18
68 69 5.260140 CGCTCGTTAAGTTTTCTTGACAAA 58.740 37.500 0.00 0.00 43.63 2.83
69 70 5.392585 CGCTCGTTAAGTTTTCTTGACAAAG 59.607 40.000 0.00 0.00 43.63 2.77
70 71 6.255950 GCTCGTTAAGTTTTCTTGACAAAGT 58.744 36.000 0.00 0.00 43.63 2.66
71 72 6.194692 GCTCGTTAAGTTTTCTTGACAAAGTG 59.805 38.462 0.00 0.00 43.63 3.16
72 73 7.136289 TCGTTAAGTTTTCTTGACAAAGTGT 57.864 32.000 0.00 0.00 43.63 3.55
73 74 7.018826 TCGTTAAGTTTTCTTGACAAAGTGTG 58.981 34.615 0.00 0.00 43.63 3.82
74 75 7.018826 CGTTAAGTTTTCTTGACAAAGTGTGA 58.981 34.615 0.00 0.00 43.63 3.58
75 76 7.696453 CGTTAAGTTTTCTTGACAAAGTGTGAT 59.304 33.333 0.00 0.00 43.63 3.06
76 77 8.798153 GTTAAGTTTTCTTGACAAAGTGTGATG 58.202 33.333 0.00 0.00 43.17 3.07
78 79 6.324819 AGTTTTCTTGACAAAGTGTGATGTG 58.675 36.000 0.00 0.00 34.78 3.21
80 81 2.618241 TCTTGACAAAGTGTGATGTGGC 59.382 45.455 0.00 0.00 34.78 5.01
81 82 2.049888 TGACAAAGTGTGATGTGGCA 57.950 45.000 0.00 0.00 0.00 4.92
82 83 2.585330 TGACAAAGTGTGATGTGGCAT 58.415 42.857 0.00 0.00 0.00 4.40
83 84 2.293955 TGACAAAGTGTGATGTGGCATG 59.706 45.455 0.00 0.00 0.00 4.06
84 85 2.553602 GACAAAGTGTGATGTGGCATGA 59.446 45.455 0.00 0.00 0.00 3.07
85 86 2.294233 ACAAAGTGTGATGTGGCATGAC 59.706 45.455 0.00 0.00 0.00 3.06
86 87 2.555325 CAAAGTGTGATGTGGCATGACT 59.445 45.455 0.00 0.00 0.00 3.41
87 88 2.574006 AGTGTGATGTGGCATGACTT 57.426 45.000 0.00 0.00 0.00 3.01
88 89 2.430465 AGTGTGATGTGGCATGACTTC 58.570 47.619 0.00 0.00 0.00 3.01
89 90 2.153645 GTGTGATGTGGCATGACTTCA 58.846 47.619 0.00 0.00 0.00 3.02
90 91 2.751259 GTGTGATGTGGCATGACTTCAT 59.249 45.455 0.00 4.72 33.86 2.57
91 92 3.940852 GTGTGATGTGGCATGACTTCATA 59.059 43.478 0.00 0.00 33.86 2.15
92 93 4.577693 GTGTGATGTGGCATGACTTCATAT 59.422 41.667 0.00 0.00 33.86 1.78
93 94 5.759763 GTGTGATGTGGCATGACTTCATATA 59.240 40.000 0.00 0.00 33.86 0.86
94 95 5.759763 TGTGATGTGGCATGACTTCATATAC 59.240 40.000 0.00 8.26 33.86 1.47
95 96 5.994054 GTGATGTGGCATGACTTCATATACT 59.006 40.000 0.00 0.00 33.86 2.12
98 99 6.976934 TGTGGCATGACTTCATATACTCTA 57.023 37.500 0.00 0.00 34.26 2.43
99 100 7.544804 TGTGGCATGACTTCATATACTCTAT 57.455 36.000 0.00 0.00 34.26 1.98
100 101 8.650143 TGTGGCATGACTTCATATACTCTATA 57.350 34.615 0.00 0.00 34.26 1.31
101 102 9.088987 TGTGGCATGACTTCATATACTCTATAA 57.911 33.333 0.00 0.00 34.26 0.98
102 103 9.929180 GTGGCATGACTTCATATACTCTATAAA 57.071 33.333 0.00 0.00 34.26 1.40
113 114 9.887629 TCATATACTCTATAAAGACCTACCGAG 57.112 37.037 0.00 0.00 0.00 4.63
114 115 9.669887 CATATACTCTATAAAGACCTACCGAGT 57.330 37.037 0.00 0.00 35.06 4.18
115 116 7.982761 ATACTCTATAAAGACCTACCGAGTG 57.017 40.000 0.00 0.00 33.15 3.51
116 117 5.753716 ACTCTATAAAGACCTACCGAGTGT 58.246 41.667 0.00 0.00 0.00 3.55
117 118 6.186234 ACTCTATAAAGACCTACCGAGTGTT 58.814 40.000 0.00 0.00 0.00 3.32
118 119 6.662663 ACTCTATAAAGACCTACCGAGTGTTT 59.337 38.462 0.00 0.00 35.22 2.83
119 120 6.860080 TCTATAAAGACCTACCGAGTGTTTG 58.140 40.000 0.00 0.00 33.32 2.93
120 121 5.733620 ATAAAGACCTACCGAGTGTTTGA 57.266 39.130 0.00 0.00 33.32 2.69
121 122 4.411256 AAAGACCTACCGAGTGTTTGAA 57.589 40.909 0.00 0.00 30.33 2.69
122 123 3.662247 AGACCTACCGAGTGTTTGAAG 57.338 47.619 0.00 0.00 0.00 3.02
123 124 2.963782 AGACCTACCGAGTGTTTGAAGT 59.036 45.455 0.00 0.00 0.00 3.01
124 125 3.005578 AGACCTACCGAGTGTTTGAAGTC 59.994 47.826 0.00 0.00 0.00 3.01
125 126 2.036862 ACCTACCGAGTGTTTGAAGTCC 59.963 50.000 0.00 0.00 0.00 3.85
127 128 2.528041 ACCGAGTGTTTGAAGTCCTC 57.472 50.000 0.00 0.00 0.00 3.71
128 129 2.040178 ACCGAGTGTTTGAAGTCCTCT 58.960 47.619 0.00 0.00 0.00 3.69
129 130 2.224066 ACCGAGTGTTTGAAGTCCTCTG 60.224 50.000 0.00 0.00 0.00 3.35
130 131 2.224066 CCGAGTGTTTGAAGTCCTCTGT 60.224 50.000 0.00 0.00 0.00 3.41
131 132 3.458189 CGAGTGTTTGAAGTCCTCTGTT 58.542 45.455 0.00 0.00 0.00 3.16
133 134 2.945668 AGTGTTTGAAGTCCTCTGTTGC 59.054 45.455 0.00 0.00 0.00 4.17
137 138 0.601046 TGAAGTCCTCTGTTGCAGCG 60.601 55.000 0.00 0.00 0.00 5.18
138 139 0.601311 GAAGTCCTCTGTTGCAGCGT 60.601 55.000 0.00 0.00 0.00 5.07
139 140 0.601311 AAGTCCTCTGTTGCAGCGTC 60.601 55.000 0.00 0.00 0.00 5.19
140 141 1.005630 GTCCTCTGTTGCAGCGTCT 60.006 57.895 0.00 0.00 0.00 4.18
141 142 0.601311 GTCCTCTGTTGCAGCGTCTT 60.601 55.000 0.00 0.00 0.00 3.01
142 143 0.601046 TCCTCTGTTGCAGCGTCTTG 60.601 55.000 0.00 0.00 0.00 3.02
143 144 0.882042 CCTCTGTTGCAGCGTCTTGT 60.882 55.000 0.00 0.00 0.00 3.16
144 145 0.940126 CTCTGTTGCAGCGTCTTGTT 59.060 50.000 0.00 0.00 0.00 2.83
150 151 1.567537 GCAGCGTCTTGTTGCGTAA 59.432 52.632 0.00 0.00 45.06 3.18
151 152 0.721483 GCAGCGTCTTGTTGCGTAAC 60.721 55.000 9.66 9.66 45.06 2.50
152 153 0.859232 CAGCGTCTTGTTGCGTAACT 59.141 50.000 17.37 0.00 37.68 2.24
153 154 1.136611 CAGCGTCTTGTTGCGTAACTC 60.137 52.381 17.37 5.00 37.68 3.01
156 157 2.659291 GCGTCTTGTTGCGTAACTCTTG 60.659 50.000 17.37 5.14 37.68 3.02
157 158 2.659291 CGTCTTGTTGCGTAACTCTTGC 60.659 50.000 17.37 3.76 37.68 4.01
159 160 3.002348 GTCTTGTTGCGTAACTCTTGCTT 59.998 43.478 17.37 0.00 37.68 3.91
160 161 4.210537 GTCTTGTTGCGTAACTCTTGCTTA 59.789 41.667 17.37 0.00 37.68 3.09
161 162 4.210537 TCTTGTTGCGTAACTCTTGCTTAC 59.789 41.667 17.37 0.00 37.68 2.34
162 163 3.459145 TGTTGCGTAACTCTTGCTTACA 58.541 40.909 17.37 0.00 37.68 2.41
163 164 4.062293 TGTTGCGTAACTCTTGCTTACAT 58.938 39.130 17.37 0.00 37.68 2.29
165 166 5.697178 TGTTGCGTAACTCTTGCTTACATAA 59.303 36.000 17.37 0.00 37.68 1.90
166 167 5.773239 TGCGTAACTCTTGCTTACATAAC 57.227 39.130 0.00 0.00 0.00 1.89
167 168 5.475719 TGCGTAACTCTTGCTTACATAACT 58.524 37.500 0.00 0.00 0.00 2.24
168 169 5.575606 TGCGTAACTCTTGCTTACATAACTC 59.424 40.000 0.00 0.00 0.00 3.01
172 173 7.541091 CGTAACTCTTGCTTACATAACTCTGAA 59.459 37.037 0.00 0.00 0.00 3.02
174 175 8.854614 AACTCTTGCTTACATAACTCTGAAAT 57.145 30.769 0.00 0.00 0.00 2.17
175 176 9.944376 AACTCTTGCTTACATAACTCTGAAATA 57.056 29.630 0.00 0.00 0.00 1.40
226 227 9.629878 TTAGTTCTAAAGTTAAATGTCAACCCA 57.370 29.630 0.00 0.00 0.00 4.51
227 228 8.706322 AGTTCTAAAGTTAAATGTCAACCCAT 57.294 30.769 0.00 0.00 0.00 4.00
228 229 8.793592 AGTTCTAAAGTTAAATGTCAACCCATC 58.206 33.333 0.00 0.00 0.00 3.51
229 230 8.793592 GTTCTAAAGTTAAATGTCAACCCATCT 58.206 33.333 0.00 0.00 0.00 2.90
232 233 7.595819 AAAGTTAAATGTCAACCCATCTGAA 57.404 32.000 0.00 0.00 0.00 3.02
233 234 6.824305 AGTTAAATGTCAACCCATCTGAAG 57.176 37.500 0.00 0.00 0.00 3.02
234 235 5.711976 AGTTAAATGTCAACCCATCTGAAGG 59.288 40.000 0.00 0.00 0.00 3.46
235 236 3.814504 AATGTCAACCCATCTGAAGGT 57.185 42.857 0.00 0.00 38.27 3.50
236 237 2.566833 TGTCAACCCATCTGAAGGTG 57.433 50.000 3.75 0.00 36.19 4.00
237 238 2.054021 TGTCAACCCATCTGAAGGTGA 58.946 47.619 3.75 0.00 36.19 4.02
238 239 2.224523 TGTCAACCCATCTGAAGGTGAC 60.225 50.000 12.95 12.95 36.19 3.67
254 255 7.458397 TGAAGGTGACCTTATTTACATCTTGT 58.542 34.615 18.28 0.00 44.82 3.16
258 259 7.554118 AGGTGACCTTATTTACATCTTGTCATG 59.446 37.037 0.00 0.00 34.42 3.07
260 261 8.391106 GTGACCTTATTTACATCTTGTCATGTC 58.609 37.037 0.00 0.00 38.07 3.06
272 274 7.604164 ACATCTTGTCATGTCTGTTTACTTAGG 59.396 37.037 0.00 0.00 30.76 2.69
273 275 7.297936 TCTTGTCATGTCTGTTTACTTAGGA 57.702 36.000 0.00 0.00 0.00 2.94
275 277 6.665992 TGTCATGTCTGTTTACTTAGGACT 57.334 37.500 0.00 0.00 0.00 3.85
293 295 3.066621 GGACTTTGTGTTTGCATGACTGA 59.933 43.478 0.00 0.00 0.00 3.41
306 308 4.820173 TGCATGACTGATCTCATTTCATCC 59.180 41.667 0.00 0.00 30.48 3.51
307 309 5.064558 GCATGACTGATCTCATTTCATCCT 58.935 41.667 0.00 0.00 30.48 3.24
320 322 5.945784 TCATTTCATCCTAAACTTCACCAGG 59.054 40.000 0.00 0.00 0.00 4.45
335 337 1.142262 ACCAGGGTTGTACAGGAACAC 59.858 52.381 5.17 0.00 0.00 3.32
420 422 1.147817 AGGCAGTTGGTTTCATCCCTT 59.852 47.619 0.00 0.00 0.00 3.95
454 2467 6.003950 AGCTAGAATGTTAACTGAAAGCCAA 58.996 36.000 7.22 0.00 37.60 4.52
455 2468 6.072452 AGCTAGAATGTTAACTGAAAGCCAAC 60.072 38.462 7.22 0.00 37.60 3.77
463 2483 0.311790 CTGAAAGCCAACGCATGTGT 59.688 50.000 5.96 5.96 37.52 3.72
499 2520 2.295349 GTGTAACTCGGTGGAGACAAGA 59.705 50.000 0.00 0.00 46.06 3.02
501 2522 0.314302 AACTCGGTGGAGACAAGACG 59.686 55.000 0.00 0.00 46.06 4.18
507 2528 1.605712 GGTGGAGACAAGACGAGTTGG 60.606 57.143 0.00 0.00 46.06 3.77
529 2550 4.119862 GGGTTTCAGGAAAAGACAAAAGC 58.880 43.478 0.00 0.00 31.33 3.51
530 2551 4.382577 GGGTTTCAGGAAAAGACAAAAGCA 60.383 41.667 0.00 0.00 31.33 3.91
531 2552 5.359756 GGTTTCAGGAAAAGACAAAAGCAT 58.640 37.500 0.00 0.00 31.33 3.79
534 2555 6.959639 TTCAGGAAAAGACAAAAGCATAGT 57.040 33.333 0.00 0.00 0.00 2.12
544 2565 3.264450 ACAAAAGCATAGTAGTGGAGGCT 59.736 43.478 0.00 0.00 0.00 4.58
597 3803 3.848272 TTCGGAATTTGCTGTTCATCC 57.152 42.857 0.00 0.00 0.00 3.51
598 3804 2.178474 CGGAATTTGCTGTTCATCCG 57.822 50.000 0.00 0.00 43.08 4.18
599 3805 1.202177 CGGAATTTGCTGTTCATCCGG 60.202 52.381 0.00 0.00 44.47 5.14
600 3806 2.091541 GGAATTTGCTGTTCATCCGGA 58.908 47.619 6.61 6.61 0.00 5.14
601 3807 2.098117 GGAATTTGCTGTTCATCCGGAG 59.902 50.000 11.34 2.05 0.00 4.63
602 3808 1.098050 ATTTGCTGTTCATCCGGAGC 58.902 50.000 11.34 7.30 0.00 4.70
603 3809 0.036732 TTTGCTGTTCATCCGGAGCT 59.963 50.000 11.34 0.00 32.41 4.09
604 3810 0.391661 TTGCTGTTCATCCGGAGCTC 60.392 55.000 11.34 4.71 32.41 4.09
605 3811 1.219124 GCTGTTCATCCGGAGCTCA 59.781 57.895 17.19 5.79 0.00 4.26
606 3812 0.391661 GCTGTTCATCCGGAGCTCAA 60.392 55.000 17.19 0.01 0.00 3.02
607 3813 1.945819 GCTGTTCATCCGGAGCTCAAA 60.946 52.381 17.19 0.00 0.00 2.69
608 3814 2.636830 CTGTTCATCCGGAGCTCAAAT 58.363 47.619 17.19 2.35 0.00 2.32
609 3815 2.353889 CTGTTCATCCGGAGCTCAAATG 59.646 50.000 17.19 14.79 0.00 2.32
610 3816 2.027285 TGTTCATCCGGAGCTCAAATGA 60.027 45.455 17.19 16.76 0.00 2.57
611 3817 2.609427 TCATCCGGAGCTCAAATGAG 57.391 50.000 17.19 6.05 44.75 2.90
623 3829 4.891627 CTCAAATGAGCTCGAGAGTAGA 57.108 45.455 18.75 3.05 35.13 2.59
624 3830 5.242069 CTCAAATGAGCTCGAGAGTAGAA 57.758 43.478 18.75 0.00 35.13 2.10
625 3831 5.242069 TCAAATGAGCTCGAGAGTAGAAG 57.758 43.478 18.75 0.30 0.00 2.85
626 3832 4.097135 TCAAATGAGCTCGAGAGTAGAAGG 59.903 45.833 18.75 0.00 0.00 3.46
627 3833 2.045561 TGAGCTCGAGAGTAGAAGGG 57.954 55.000 18.75 0.00 0.00 3.95
628 3834 1.314730 GAGCTCGAGAGTAGAAGGGG 58.685 60.000 18.75 0.00 0.00 4.79
629 3835 0.920438 AGCTCGAGAGTAGAAGGGGA 59.080 55.000 18.75 0.00 0.00 4.81
630 3836 1.285373 AGCTCGAGAGTAGAAGGGGAA 59.715 52.381 18.75 0.00 0.00 3.97
631 3837 2.100989 GCTCGAGAGTAGAAGGGGAAA 58.899 52.381 18.75 0.00 0.00 3.13
632 3838 2.100087 GCTCGAGAGTAGAAGGGGAAAG 59.900 54.545 18.75 0.00 0.00 2.62
638 3844 5.622180 GAGAGTAGAAGGGGAAAGTGTTTT 58.378 41.667 0.00 0.00 0.00 2.43
658 3864 4.974645 TTATCACGAATAATGGGGCTCT 57.025 40.909 0.00 0.00 0.00 4.09
666 3872 2.620251 TAATGGGGCTCTGAATGACG 57.380 50.000 0.00 0.00 0.00 4.35
683 3889 0.524862 ACGAAGTCGCTACGTCCAAT 59.475 50.000 0.00 0.00 44.43 3.16
737 3979 6.978343 AAATTCATTCATGTGCCATCAAAG 57.022 33.333 0.00 0.00 0.00 2.77
786 4028 4.211125 CCACTAGCTGAGGATTAGTCTGA 58.789 47.826 0.00 0.00 0.00 3.27
789 4031 3.817709 AGCTGAGGATTAGTCTGAAGC 57.182 47.619 0.00 0.00 0.00 3.86
817 4062 2.869636 GCATCTACCATCCACTAGCTGC 60.870 54.545 0.00 0.00 0.00 5.25
884 4137 9.535878 GTAATGCAAGCTTAGAACTAAGATAGT 57.464 33.333 21.14 6.17 43.90 2.12
886 4139 9.757227 AATGCAAGCTTAGAACTAAGATAGTAG 57.243 33.333 21.14 9.93 43.90 2.57
897 4150 9.091220 AGAACTAAGATAGTAGAAAACAGGTGT 57.909 33.333 0.00 0.00 38.26 4.16
898 4151 9.141400 GAACTAAGATAGTAGAAAACAGGTGTG 57.859 37.037 0.00 0.00 38.26 3.82
901 4154 7.540474 AAGATAGTAGAAAACAGGTGTGAGA 57.460 36.000 0.00 0.00 0.00 3.27
904 4157 4.962155 AGTAGAAAACAGGTGTGAGAAGG 58.038 43.478 0.00 0.00 0.00 3.46
905 4158 4.654262 AGTAGAAAACAGGTGTGAGAAGGA 59.346 41.667 0.00 0.00 0.00 3.36
906 4159 4.503714 AGAAAACAGGTGTGAGAAGGAA 57.496 40.909 0.00 0.00 0.00 3.36
907 4160 5.053978 AGAAAACAGGTGTGAGAAGGAAT 57.946 39.130 0.00 0.00 0.00 3.01
908 4161 5.066593 AGAAAACAGGTGTGAGAAGGAATC 58.933 41.667 0.00 0.00 0.00 2.52
909 4162 3.425162 AACAGGTGTGAGAAGGAATCC 57.575 47.619 0.00 0.00 0.00 3.01
910 4163 1.630878 ACAGGTGTGAGAAGGAATCCC 59.369 52.381 0.00 0.00 0.00 3.85
911 4164 1.065126 CAGGTGTGAGAAGGAATCCCC 60.065 57.143 0.00 0.00 0.00 4.81
976 4283 0.745486 TTCATGCTGATCTGTGCCCG 60.745 55.000 1.27 0.00 0.00 6.13
996 4303 3.541632 CGCTATAAAACCCACCACTCAT 58.458 45.455 0.00 0.00 0.00 2.90
997 4304 3.560068 CGCTATAAAACCCACCACTCATC 59.440 47.826 0.00 0.00 0.00 2.92
998 4305 4.523083 GCTATAAAACCCACCACTCATCA 58.477 43.478 0.00 0.00 0.00 3.07
1044 9874 3.387374 ACACCAATTCAACAATGGCTTCA 59.613 39.130 0.00 0.00 0.00 3.02
1045 9875 3.991773 CACCAATTCAACAATGGCTTCAG 59.008 43.478 0.00 0.00 0.00 3.02
1084 9914 0.102120 CTGCTCCCTGCTACTTCTCG 59.898 60.000 0.00 0.00 43.37 4.04
1283 11463 1.523711 CCAACCGCATCCGCTACAT 60.524 57.895 0.00 0.00 35.30 2.29
1385 11565 4.278956 CGTGTACAAGGACAGGCC 57.721 61.111 0.00 0.00 0.00 5.19
1579 11759 4.643387 GGGGCAAGTGCGTGGACT 62.643 66.667 0.00 0.00 43.26 3.85
1594 11774 1.272554 GGACTCCCCGGGATTCAACT 61.273 60.000 26.32 0.00 33.75 3.16
1740 15180 1.281899 CCGATCTCTTCAAGTTCGCC 58.718 55.000 0.00 0.00 43.03 5.54
1812 15252 1.406539 GCGTGCATTCCCATGAAAGAT 59.593 47.619 0.00 0.00 33.32 2.40
2010 15453 1.844357 CCGACAGCGTCAAGTATAACG 59.156 52.381 8.91 0.00 41.68 3.18
2508 19025 2.678470 GGCCCCAACCCGATTGTA 59.322 61.111 0.00 0.00 36.47 2.41
2606 19123 2.350895 CTCCAACATGGACCCGCA 59.649 61.111 0.00 0.00 42.67 5.69
2649 19166 4.430765 GGGACGTCGATGGCGTGT 62.431 66.667 9.92 0.00 43.04 4.49
2770 19287 0.905357 CAAGAACGGGAGGGACATCT 59.095 55.000 0.00 0.00 0.00 2.90
2952 19469 3.084579 CAGATGCGGCTGTTCGTC 58.915 61.111 0.00 0.00 0.00 4.20
3112 19629 0.240411 GAGCTACAACGTGACGGTCT 59.760 55.000 10.66 0.00 0.00 3.85
3405 19963 6.166279 TGTTGTGATACTTGAGAGTTGATCC 58.834 40.000 0.00 0.00 37.33 3.36
3444 20002 7.893658 AGAAGAAGAATCAGCATTTCATTGTT 58.106 30.769 0.00 0.00 0.00 2.83
3452 20010 5.522456 TCAGCATTTCATTGTTGTGAACTC 58.478 37.500 0.00 0.00 37.80 3.01
3508 20068 3.726557 TTCTCCTGTCCAATTGCATCT 57.273 42.857 0.00 0.00 0.00 2.90
3509 20069 4.842531 TTCTCCTGTCCAATTGCATCTA 57.157 40.909 0.00 0.00 0.00 1.98
3510 20070 4.412796 TCTCCTGTCCAATTGCATCTAG 57.587 45.455 0.00 0.00 0.00 2.43
3556 20303 9.071276 GTCCAACTTCATGTAATGGAATCATAT 57.929 33.333 11.80 0.00 46.73 1.78
3594 20341 2.923020 GACCCGCATTTACATTTTGCAG 59.077 45.455 0.00 0.00 36.15 4.41
3608 20355 1.123861 TTGCAGGGCTCTCTCAGTGT 61.124 55.000 0.00 0.00 0.00 3.55
3646 20397 3.552684 CCTTGGTGATGCGTTCATGTTTT 60.553 43.478 0.00 0.00 36.54 2.43
3647 20398 4.320861 CCTTGGTGATGCGTTCATGTTTTA 60.321 41.667 0.00 0.00 36.54 1.52
3648 20399 4.418013 TGGTGATGCGTTCATGTTTTAG 57.582 40.909 0.00 0.00 36.54 1.85
3649 20400 3.171277 GGTGATGCGTTCATGTTTTAGC 58.829 45.455 0.00 0.00 36.54 3.09
3650 20401 3.119849 GGTGATGCGTTCATGTTTTAGCT 60.120 43.478 0.00 0.00 36.54 3.32
3651 20402 4.094294 GGTGATGCGTTCATGTTTTAGCTA 59.906 41.667 0.00 0.00 36.54 3.32
3652 20403 5.258622 GTGATGCGTTCATGTTTTAGCTAG 58.741 41.667 0.00 0.00 36.54 3.42
3653 20404 4.332543 TGATGCGTTCATGTTTTAGCTAGG 59.667 41.667 0.00 0.00 31.96 3.02
3654 20405 3.670625 TGCGTTCATGTTTTAGCTAGGT 58.329 40.909 0.00 0.00 0.00 3.08
3655 20406 4.823157 TGCGTTCATGTTTTAGCTAGGTA 58.177 39.130 0.00 0.00 0.00 3.08
3656 20407 5.424757 TGCGTTCATGTTTTAGCTAGGTAT 58.575 37.500 1.80 0.00 0.00 2.73
3657 20408 6.575267 TGCGTTCATGTTTTAGCTAGGTATA 58.425 36.000 1.80 0.00 0.00 1.47
3658 20409 7.214381 TGCGTTCATGTTTTAGCTAGGTATAT 58.786 34.615 1.80 0.00 0.00 0.86
3659 20410 7.713507 TGCGTTCATGTTTTAGCTAGGTATATT 59.286 33.333 1.80 0.00 0.00 1.28
3660 20411 8.221766 GCGTTCATGTTTTAGCTAGGTATATTC 58.778 37.037 1.80 0.00 0.00 1.75
3661 20412 8.709646 CGTTCATGTTTTAGCTAGGTATATTCC 58.290 37.037 1.80 0.00 0.00 3.01
3662 20413 9.555727 GTTCATGTTTTAGCTAGGTATATTCCA 57.444 33.333 1.80 0.00 0.00 3.53
3672 20423 8.191534 AGCTAGGTATATTCCAAATTACTCGT 57.808 34.615 0.78 0.00 0.00 4.18
3673 20424 8.305317 AGCTAGGTATATTCCAAATTACTCGTC 58.695 37.037 0.78 0.00 0.00 4.20
3674 20425 7.272948 GCTAGGTATATTCCAAATTACTCGTCG 59.727 40.741 0.78 0.00 0.00 5.12
3675 20426 7.047460 AGGTATATTCCAAATTACTCGTCGT 57.953 36.000 0.78 0.00 0.00 4.34
3676 20427 8.169977 AGGTATATTCCAAATTACTCGTCGTA 57.830 34.615 0.78 0.00 0.00 3.43
3677 20428 8.295288 AGGTATATTCCAAATTACTCGTCGTAG 58.705 37.037 0.78 0.00 0.00 3.51
3678 20429 8.292448 GGTATATTCCAAATTACTCGTCGTAGA 58.708 37.037 0.00 0.00 0.00 2.59
3679 20430 9.669353 GTATATTCCAAATTACTCGTCGTAGAA 57.331 33.333 0.00 0.00 39.69 2.10
3681 20432 9.760077 ATATTCCAAATTACTCGTCGTAGAAAT 57.240 29.630 0.00 0.00 39.69 2.17
3682 20433 6.880822 TCCAAATTACTCGTCGTAGAAATG 57.119 37.500 0.00 0.00 39.69 2.32
3683 20434 6.623486 TCCAAATTACTCGTCGTAGAAATGA 58.377 36.000 0.00 0.00 39.69 2.57
3684 20435 7.092079 TCCAAATTACTCGTCGTAGAAATGAA 58.908 34.615 0.00 0.00 39.69 2.57
3685 20436 7.762615 TCCAAATTACTCGTCGTAGAAATGAAT 59.237 33.333 0.00 0.00 39.69 2.57
3686 20437 7.846107 CCAAATTACTCGTCGTAGAAATGAATG 59.154 37.037 0.00 0.00 39.69 2.67
3687 20438 8.380644 CAAATTACTCGTCGTAGAAATGAATGT 58.619 33.333 0.00 0.00 39.69 2.71
3688 20439 9.577110 AAATTACTCGTCGTAGAAATGAATGTA 57.423 29.630 0.00 0.00 39.69 2.29
3689 20440 9.745880 AATTACTCGTCGTAGAAATGAATGTAT 57.254 29.630 0.00 0.00 39.69 2.29
3690 20441 8.778141 TTACTCGTCGTAGAAATGAATGTATC 57.222 34.615 0.00 0.00 39.69 2.24
3691 20442 7.028926 ACTCGTCGTAGAAATGAATGTATCT 57.971 36.000 0.00 0.00 39.69 1.98
3692 20443 8.151141 ACTCGTCGTAGAAATGAATGTATCTA 57.849 34.615 0.00 0.00 39.69 1.98
3693 20444 8.283992 ACTCGTCGTAGAAATGAATGTATCTAG 58.716 37.037 0.00 0.00 39.69 2.43
3694 20445 8.374327 TCGTCGTAGAAATGAATGTATCTAGA 57.626 34.615 0.00 0.00 39.69 2.43
3695 20446 8.833493 TCGTCGTAGAAATGAATGTATCTAGAA 58.167 33.333 0.00 0.00 39.69 2.10
3696 20447 8.893884 CGTCGTAGAAATGAATGTATCTAGAAC 58.106 37.037 0.00 0.00 39.69 3.01
3697 20448 9.953697 GTCGTAGAAATGAATGTATCTAGAACT 57.046 33.333 0.00 0.00 39.69 3.01
3726 20477 6.537453 ACATCTAGATACATCCATACCTGC 57.463 41.667 4.54 0.00 0.00 4.85
3727 20478 5.126222 ACATCTAGATACATCCATACCTGCG 59.874 44.000 4.54 0.00 0.00 5.18
3728 20479 4.918588 TCTAGATACATCCATACCTGCGA 58.081 43.478 0.00 0.00 0.00 5.10
3729 20480 3.944055 AGATACATCCATACCTGCGAC 57.056 47.619 0.00 0.00 0.00 5.19
3730 20481 3.230976 AGATACATCCATACCTGCGACA 58.769 45.455 0.00 0.00 0.00 4.35
3731 20482 3.641436 AGATACATCCATACCTGCGACAA 59.359 43.478 0.00 0.00 0.00 3.18
3732 20483 2.315925 ACATCCATACCTGCGACAAG 57.684 50.000 0.00 0.00 0.00 3.16
3733 20484 1.555075 ACATCCATACCTGCGACAAGT 59.445 47.619 0.00 0.00 0.00 3.16
3734 20485 2.764010 ACATCCATACCTGCGACAAGTA 59.236 45.455 0.00 0.00 0.00 2.24
3735 20486 3.196901 ACATCCATACCTGCGACAAGTAA 59.803 43.478 0.00 0.00 0.00 2.24
3736 20487 4.141711 ACATCCATACCTGCGACAAGTAAT 60.142 41.667 0.00 0.00 0.00 1.89
3737 20488 4.481368 TCCATACCTGCGACAAGTAATT 57.519 40.909 0.00 0.00 0.00 1.40
3738 20489 4.439057 TCCATACCTGCGACAAGTAATTC 58.561 43.478 0.00 0.00 0.00 2.17
3739 20490 3.245284 CCATACCTGCGACAAGTAATTCG 59.755 47.826 0.00 0.00 38.31 3.34
3740 20491 2.736144 ACCTGCGACAAGTAATTCGA 57.264 45.000 0.00 0.00 37.43 3.71
3741 20492 3.034721 ACCTGCGACAAGTAATTCGAA 57.965 42.857 0.00 0.00 37.43 3.71
3742 20493 3.395639 ACCTGCGACAAGTAATTCGAAA 58.604 40.909 0.00 0.00 37.43 3.46
3743 20494 3.185797 ACCTGCGACAAGTAATTCGAAAC 59.814 43.478 0.00 0.00 37.43 2.78
3744 20495 3.395671 CTGCGACAAGTAATTCGAAACG 58.604 45.455 0.00 0.09 37.43 3.60
3745 20496 2.156117 TGCGACAAGTAATTCGAAACGG 59.844 45.455 0.00 0.00 37.43 4.44
3746 20497 2.409378 GCGACAAGTAATTCGAAACGGA 59.591 45.455 0.00 0.00 37.43 4.69
3747 20498 3.481467 GCGACAAGTAATTCGAAACGGAG 60.481 47.826 0.00 0.00 37.43 4.63
3748 20499 3.060363 CGACAAGTAATTCGAAACGGAGG 59.940 47.826 0.00 0.00 37.43 4.30
3749 20500 3.332034 ACAAGTAATTCGAAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
3750 20501 3.007182 ACAAGTAATTCGAAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
3791 20542 7.426410 ACTTGAGATTGTAGTATCATGTACGG 58.574 38.462 0.00 0.00 29.41 4.02
3792 20543 6.954487 TGAGATTGTAGTATCATGTACGGT 57.046 37.500 0.00 0.00 0.00 4.83
3793 20544 6.967135 TGAGATTGTAGTATCATGTACGGTC 58.033 40.000 0.00 0.00 0.00 4.79
3794 20545 5.998553 AGATTGTAGTATCATGTACGGTCG 58.001 41.667 0.00 0.00 0.00 4.79
3805 20556 2.086510 TACGGTCGGTACTGTACGC 58.913 57.895 16.67 4.49 43.61 4.42
3810 20561 1.268743 GGTCGGTACTGTACGCCATAC 60.269 57.143 11.52 5.38 0.00 2.39
3811 20562 1.672881 GTCGGTACTGTACGCCATACT 59.327 52.381 11.52 0.00 34.56 2.12
3812 20563 1.942657 TCGGTACTGTACGCCATACTC 59.057 52.381 11.52 0.00 34.56 2.59
3813 20564 1.002033 CGGTACTGTACGCCATACTCC 60.002 57.143 11.52 0.00 34.56 3.85
3814 20565 1.339291 GGTACTGTACGCCATACTCCC 59.661 57.143 11.52 0.00 34.56 4.30
3815 20566 2.305009 GTACTGTACGCCATACTCCCT 58.695 52.381 1.67 0.00 34.56 4.20
3816 20567 1.400737 ACTGTACGCCATACTCCCTC 58.599 55.000 0.00 0.00 34.56 4.30
3817 20568 0.674534 CTGTACGCCATACTCCCTCC 59.325 60.000 0.00 0.00 34.56 4.30
3818 20569 1.105167 TGTACGCCATACTCCCTCCG 61.105 60.000 0.00 0.00 34.56 4.63
3819 20570 1.105759 GTACGCCATACTCCCTCCGT 61.106 60.000 0.00 0.00 0.00 4.69
3820 20571 0.396139 TACGCCATACTCCCTCCGTT 60.396 55.000 0.00 0.00 0.00 4.44
3821 20572 1.262640 ACGCCATACTCCCTCCGTTT 61.263 55.000 0.00 0.00 0.00 3.60
3822 20573 0.810031 CGCCATACTCCCTCCGTTTG 60.810 60.000 0.00 0.00 0.00 2.93
3823 20574 0.252197 GCCATACTCCCTCCGTTTGT 59.748 55.000 0.00 0.00 0.00 2.83
3824 20575 1.339727 GCCATACTCCCTCCGTTTGTT 60.340 52.381 0.00 0.00 0.00 2.83
3825 20576 2.878526 GCCATACTCCCTCCGTTTGTTT 60.879 50.000 0.00 0.00 0.00 2.83
3826 20577 3.418047 CCATACTCCCTCCGTTTGTTTT 58.582 45.455 0.00 0.00 0.00 2.43
3827 20578 3.824443 CCATACTCCCTCCGTTTGTTTTT 59.176 43.478 0.00 0.00 0.00 1.94
3828 20579 5.005094 CCATACTCCCTCCGTTTGTTTTTA 58.995 41.667 0.00 0.00 0.00 1.52
3829 20580 5.123344 CCATACTCCCTCCGTTTGTTTTTAG 59.877 44.000 0.00 0.00 0.00 1.85
3830 20581 4.160642 ACTCCCTCCGTTTGTTTTTAGT 57.839 40.909 0.00 0.00 0.00 2.24
3831 20582 4.529897 ACTCCCTCCGTTTGTTTTTAGTT 58.470 39.130 0.00 0.00 0.00 2.24
3832 20583 4.951715 ACTCCCTCCGTTTGTTTTTAGTTT 59.048 37.500 0.00 0.00 0.00 2.66
3833 20584 5.163591 ACTCCCTCCGTTTGTTTTTAGTTTG 60.164 40.000 0.00 0.00 0.00 2.93
3834 20585 3.799963 CCCTCCGTTTGTTTTTAGTTTGC 59.200 43.478 0.00 0.00 0.00 3.68
3835 20586 4.425520 CCTCCGTTTGTTTTTAGTTTGCA 58.574 39.130 0.00 0.00 0.00 4.08
3836 20587 5.047188 CCTCCGTTTGTTTTTAGTTTGCAT 58.953 37.500 0.00 0.00 0.00 3.96
3837 20588 6.210078 CCTCCGTTTGTTTTTAGTTTGCATA 58.790 36.000 0.00 0.00 0.00 3.14
3838 20589 6.866248 CCTCCGTTTGTTTTTAGTTTGCATAT 59.134 34.615 0.00 0.00 0.00 1.78
3839 20590 8.024285 CCTCCGTTTGTTTTTAGTTTGCATATA 58.976 33.333 0.00 0.00 0.00 0.86
3840 20591 9.400638 CTCCGTTTGTTTTTAGTTTGCATATAA 57.599 29.630 0.00 0.00 0.00 0.98
3841 20592 9.400638 TCCGTTTGTTTTTAGTTTGCATATAAG 57.599 29.630 0.00 0.00 0.00 1.73
3842 20593 9.400638 CCGTTTGTTTTTAGTTTGCATATAAGA 57.599 29.630 0.00 0.00 0.00 2.10
3854 20605 8.806146 AGTTTGCATATAAGATTTGGTCAAAGT 58.194 29.630 2.55 0.00 33.32 2.66
3855 20606 9.076596 GTTTGCATATAAGATTTGGTCAAAGTC 57.923 33.333 2.55 1.51 33.32 3.01
3856 20607 7.936496 TGCATATAAGATTTGGTCAAAGTCA 57.064 32.000 2.55 0.00 33.32 3.41
3857 20608 8.347004 TGCATATAAGATTTGGTCAAAGTCAA 57.653 30.769 2.55 0.00 33.32 3.18
3858 20609 8.801299 TGCATATAAGATTTGGTCAAAGTCAAA 58.199 29.630 2.55 0.00 37.29 2.69
3859 20610 9.076596 GCATATAAGATTTGGTCAAAGTCAAAC 57.923 33.333 2.55 0.00 35.97 2.93
4005 20756 7.876896 GTTGGTCAAACTTTACAAACTTTGA 57.123 32.000 8.55 5.80 35.75 2.69
4006 20757 7.726079 GTTGGTCAAACTTTACAAACTTTGAC 58.274 34.615 20.28 20.28 43.34 3.18
4007 20758 7.222000 TGGTCAAACTTTACAAACTTTGACT 57.778 32.000 23.76 0.00 43.45 3.41
4008 20759 7.662897 TGGTCAAACTTTACAAACTTTGACTT 58.337 30.769 23.76 0.00 43.45 3.01
4009 20760 8.145122 TGGTCAAACTTTACAAACTTTGACTTT 58.855 29.630 23.76 0.00 43.45 2.66
4010 20761 8.432359 GGTCAAACTTTACAAACTTTGACTTTG 58.568 33.333 23.76 7.70 43.45 2.77
4011 20762 9.187455 GTCAAACTTTACAAACTTTGACTTTGA 57.813 29.630 20.72 9.42 42.23 2.69
4012 20763 9.187455 TCAAACTTTACAAACTTTGACTTTGAC 57.813 29.630 8.55 0.00 30.84 3.18
4013 20764 8.432359 CAAACTTTACAAACTTTGACTTTGACC 58.568 33.333 8.55 0.00 33.56 4.02
4014 20765 7.222000 ACTTTACAAACTTTGACTTTGACCA 57.778 32.000 8.55 0.00 33.56 4.02
4015 20766 7.662897 ACTTTACAAACTTTGACTTTGACCAA 58.337 30.769 8.55 0.00 33.56 3.67
4016 20767 8.145122 ACTTTACAAACTTTGACTTTGACCAAA 58.855 29.630 8.55 0.00 33.56 3.28
4017 20768 9.150348 CTTTACAAACTTTGACTTTGACCAAAT 57.850 29.630 8.55 0.00 33.56 2.32
4018 20769 8.696410 TTACAAACTTTGACTTTGACCAAATC 57.304 30.769 8.55 0.00 33.56 2.17
4019 20770 6.935167 ACAAACTTTGACTTTGACCAAATCT 58.065 32.000 8.55 0.00 33.56 2.40
4020 20771 7.386059 ACAAACTTTGACTTTGACCAAATCTT 58.614 30.769 8.55 0.00 33.56 2.40
4021 20772 8.527810 ACAAACTTTGACTTTGACCAAATCTTA 58.472 29.630 8.55 0.00 33.56 2.10
4022 20773 9.533253 CAAACTTTGACTTTGACCAAATCTTAT 57.467 29.630 0.00 0.00 32.60 1.73
4026 20777 9.294030 CTTTGACTTTGACCAAATCTTATATGC 57.706 33.333 0.00 0.00 32.60 3.14
4027 20778 7.936496 TGACTTTGACCAAATCTTATATGCA 57.064 32.000 0.00 0.00 0.00 3.96
4028 20779 7.988737 TGACTTTGACCAAATCTTATATGCAG 58.011 34.615 0.00 0.00 0.00 4.41
4029 20780 7.828717 TGACTTTGACCAAATCTTATATGCAGA 59.171 33.333 0.00 0.00 0.00 4.26
4030 20781 7.989826 ACTTTGACCAAATCTTATATGCAGAC 58.010 34.615 0.00 0.00 0.00 3.51
4031 20782 7.831193 ACTTTGACCAAATCTTATATGCAGACT 59.169 33.333 0.00 0.00 0.00 3.24
4032 20783 9.330063 CTTTGACCAAATCTTATATGCAGACTA 57.670 33.333 0.00 0.00 0.00 2.59
4033 20784 9.679661 TTTGACCAAATCTTATATGCAGACTAA 57.320 29.630 0.00 0.00 0.00 2.24
4034 20785 9.679661 TTGACCAAATCTTATATGCAGACTAAA 57.320 29.630 0.00 0.00 0.00 1.85
4035 20786 9.679661 TGACCAAATCTTATATGCAGACTAAAA 57.320 29.630 0.00 0.00 0.00 1.52
4043 20794 8.879759 TCTTATATGCAGACTAAAAAGAAACGG 58.120 33.333 0.00 0.00 0.00 4.44
4044 20795 8.780846 TTATATGCAGACTAAAAAGAAACGGA 57.219 30.769 0.00 0.00 0.00 4.69
4045 20796 5.613358 ATGCAGACTAAAAAGAAACGGAG 57.387 39.130 0.00 0.00 0.00 4.63
4046 20797 4.699637 TGCAGACTAAAAAGAAACGGAGA 58.300 39.130 0.00 0.00 0.00 3.71
4047 20798 4.750098 TGCAGACTAAAAAGAAACGGAGAG 59.250 41.667 0.00 0.00 0.00 3.20
4048 20799 4.989168 GCAGACTAAAAAGAAACGGAGAGA 59.011 41.667 0.00 0.00 0.00 3.10
4049 20800 5.119434 GCAGACTAAAAAGAAACGGAGAGAG 59.881 44.000 0.00 0.00 0.00 3.20
4050 20801 6.217294 CAGACTAAAAAGAAACGGAGAGAGT 58.783 40.000 0.00 0.00 0.00 3.24
4051 20802 7.368833 CAGACTAAAAAGAAACGGAGAGAGTA 58.631 38.462 0.00 0.00 0.00 2.59
4137 20888 5.573219 TGGATCATTTCATCATATCCACCC 58.427 41.667 0.00 0.00 40.84 4.61
4212 20966 9.942526 ATTGATTTGAAATACTCCCTTTATCCT 57.057 29.630 0.00 0.00 0.00 3.24
4266 21020 1.829096 GGGACGGAGGGAGTAGCTC 60.829 68.421 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.937814 ACTAACACATCTTCCATGCGAA 58.062 40.909 0.00 0.00 0.00 4.70
3 4 5.023533 TCCTACTAACACATCTTCCATGC 57.976 43.478 0.00 0.00 0.00 4.06
6 7 7.311092 TCTTTTCCTACTAACACATCTTCCA 57.689 36.000 0.00 0.00 0.00 3.53
7 8 8.794335 AATCTTTTCCTACTAACACATCTTCC 57.206 34.615 0.00 0.00 0.00 3.46
18 19 8.455682 CGCAACCATTTAAATCTTTTCCTACTA 58.544 33.333 0.00 0.00 0.00 1.82
20 21 6.034577 GCGCAACCATTTAAATCTTTTCCTAC 59.965 38.462 0.30 0.00 0.00 3.18
21 22 6.096695 GCGCAACCATTTAAATCTTTTCCTA 58.903 36.000 0.30 0.00 0.00 2.94
23 24 4.201580 CGCGCAACCATTTAAATCTTTTCC 60.202 41.667 8.75 0.00 0.00 3.13
24 25 4.720946 GCGCGCAACCATTTAAATCTTTTC 60.721 41.667 29.10 0.00 0.00 2.29
25 26 3.122780 GCGCGCAACCATTTAAATCTTTT 59.877 39.130 29.10 0.00 0.00 2.27
26 27 2.666022 GCGCGCAACCATTTAAATCTTT 59.334 40.909 29.10 0.00 0.00 2.52
27 28 2.094752 AGCGCGCAACCATTTAAATCTT 60.095 40.909 35.10 2.61 0.00 2.40
28 29 1.472480 AGCGCGCAACCATTTAAATCT 59.528 42.857 35.10 3.40 0.00 2.40
29 30 1.846175 GAGCGCGCAACCATTTAAATC 59.154 47.619 35.10 13.51 0.00 2.17
30 31 1.793714 CGAGCGCGCAACCATTTAAAT 60.794 47.619 35.10 7.44 0.00 1.40
31 32 0.453615 CGAGCGCGCAACCATTTAAA 60.454 50.000 35.10 0.00 0.00 1.52
32 33 1.133664 CGAGCGCGCAACCATTTAA 59.866 52.632 35.10 0.00 0.00 1.52
33 34 1.570347 AACGAGCGCGCAACCATTTA 61.570 50.000 35.10 0.00 42.48 1.40
34 35 1.570347 TAACGAGCGCGCAACCATTT 61.570 50.000 35.10 18.22 42.48 2.32
35 36 1.570347 TTAACGAGCGCGCAACCATT 61.570 50.000 35.10 20.70 42.48 3.16
36 37 1.966493 CTTAACGAGCGCGCAACCAT 61.966 55.000 35.10 12.64 42.48 3.55
37 38 2.662196 TTAACGAGCGCGCAACCA 60.662 55.556 35.10 11.29 42.48 3.67
38 39 2.095843 CTTAACGAGCGCGCAACC 59.904 61.111 35.10 20.18 42.48 3.77
39 40 0.383860 AAACTTAACGAGCGCGCAAC 60.384 50.000 35.10 24.51 42.48 4.17
41 42 0.111001 GAAAACTTAACGAGCGCGCA 60.111 50.000 35.10 9.38 42.48 6.09
42 43 0.163146 AGAAAACTTAACGAGCGCGC 59.837 50.000 26.66 26.66 42.48 6.86
43 44 2.097104 TCAAGAAAACTTAACGAGCGCG 60.097 45.455 8.75 8.75 44.79 6.86
44 45 3.216031 GTCAAGAAAACTTAACGAGCGC 58.784 45.455 0.00 0.00 0.00 5.92
46 47 6.194692 CACTTTGTCAAGAAAACTTAACGAGC 59.805 38.462 0.00 0.00 33.72 5.03
47 48 7.216317 CACACTTTGTCAAGAAAACTTAACGAG 59.784 37.037 0.00 0.00 33.72 4.18
48 49 7.018826 CACACTTTGTCAAGAAAACTTAACGA 58.981 34.615 0.00 0.00 33.72 3.85
49 50 7.018826 TCACACTTTGTCAAGAAAACTTAACG 58.981 34.615 0.00 0.00 33.72 3.18
50 51 8.798153 CATCACACTTTGTCAAGAAAACTTAAC 58.202 33.333 0.00 0.00 33.72 2.01
51 52 8.519526 ACATCACACTTTGTCAAGAAAACTTAA 58.480 29.630 0.00 0.00 33.72 1.85
52 53 7.967854 CACATCACACTTTGTCAAGAAAACTTA 59.032 33.333 0.00 0.00 33.72 2.24
53 54 6.808212 CACATCACACTTTGTCAAGAAAACTT 59.192 34.615 0.00 0.00 33.72 2.66
54 55 6.324819 CACATCACACTTTGTCAAGAAAACT 58.675 36.000 0.00 0.00 33.72 2.66
55 56 5.516339 CCACATCACACTTTGTCAAGAAAAC 59.484 40.000 0.00 0.00 33.72 2.43
56 57 5.649557 CCACATCACACTTTGTCAAGAAAA 58.350 37.500 0.00 0.00 33.72 2.29
57 58 4.439974 GCCACATCACACTTTGTCAAGAAA 60.440 41.667 0.00 0.00 33.72 2.52
59 60 2.618241 GCCACATCACACTTTGTCAAGA 59.382 45.455 0.00 0.00 33.72 3.02
60 61 2.358582 TGCCACATCACACTTTGTCAAG 59.641 45.455 0.00 0.00 35.92 3.02
61 62 2.373224 TGCCACATCACACTTTGTCAA 58.627 42.857 0.00 0.00 0.00 3.18
63 64 2.553602 TCATGCCACATCACACTTTGTC 59.446 45.455 0.00 0.00 0.00 3.18
64 65 2.294233 GTCATGCCACATCACACTTTGT 59.706 45.455 0.00 0.00 0.00 2.83
65 66 2.555325 AGTCATGCCACATCACACTTTG 59.445 45.455 0.00 0.00 0.00 2.77
68 69 2.224597 TGAAGTCATGCCACATCACACT 60.225 45.455 0.00 0.00 0.00 3.55
69 70 2.153645 TGAAGTCATGCCACATCACAC 58.846 47.619 0.00 0.00 0.00 3.82
70 71 2.565046 TGAAGTCATGCCACATCACA 57.435 45.000 0.00 0.00 0.00 3.58
71 72 5.994054 AGTATATGAAGTCATGCCACATCAC 59.006 40.000 4.00 0.00 37.15 3.06
72 73 6.042437 AGAGTATATGAAGTCATGCCACATCA 59.958 38.462 4.00 0.00 37.15 3.07
73 74 6.462500 AGAGTATATGAAGTCATGCCACATC 58.538 40.000 4.00 0.00 37.15 3.06
74 75 6.430962 AGAGTATATGAAGTCATGCCACAT 57.569 37.500 4.00 0.00 37.15 3.21
75 76 5.876651 AGAGTATATGAAGTCATGCCACA 57.123 39.130 4.00 0.00 37.15 4.17
76 77 9.929180 TTTATAGAGTATATGAAGTCATGCCAC 57.071 33.333 4.00 0.02 37.15 5.01
87 88 9.887629 CTCGGTAGGTCTTTATAGAGTATATGA 57.112 37.037 0.00 0.00 0.00 2.15
88 89 9.669887 ACTCGGTAGGTCTTTATAGAGTATATG 57.330 37.037 0.00 0.00 36.15 1.78
89 90 9.669887 CACTCGGTAGGTCTTTATAGAGTATAT 57.330 37.037 0.00 0.00 36.15 0.86
90 91 8.654997 ACACTCGGTAGGTCTTTATAGAGTATA 58.345 37.037 0.00 0.00 36.15 1.47
91 92 7.516452 ACACTCGGTAGGTCTTTATAGAGTAT 58.484 38.462 0.00 0.00 36.15 2.12
92 93 6.893583 ACACTCGGTAGGTCTTTATAGAGTA 58.106 40.000 0.00 0.00 36.15 2.59
93 94 5.753716 ACACTCGGTAGGTCTTTATAGAGT 58.246 41.667 0.00 0.00 38.11 3.24
94 95 6.696441 AACACTCGGTAGGTCTTTATAGAG 57.304 41.667 0.00 0.00 0.00 2.43
95 96 6.660521 TCAAACACTCGGTAGGTCTTTATAGA 59.339 38.462 0.00 0.00 0.00 1.98
98 99 5.733620 TCAAACACTCGGTAGGTCTTTAT 57.266 39.130 0.00 0.00 0.00 1.40
99 100 5.069516 ACTTCAAACACTCGGTAGGTCTTTA 59.930 40.000 0.00 0.00 0.00 1.85
100 101 4.141779 ACTTCAAACACTCGGTAGGTCTTT 60.142 41.667 0.00 0.00 0.00 2.52
101 102 3.387050 ACTTCAAACACTCGGTAGGTCTT 59.613 43.478 0.00 0.00 0.00 3.01
102 103 2.963782 ACTTCAAACACTCGGTAGGTCT 59.036 45.455 0.00 0.00 0.00 3.85
103 104 3.315418 GACTTCAAACACTCGGTAGGTC 58.685 50.000 0.00 0.00 0.00 3.85
104 105 2.036862 GGACTTCAAACACTCGGTAGGT 59.963 50.000 0.00 0.00 0.00 3.08
107 108 3.005472 CAGAGGACTTCAAACACTCGGTA 59.995 47.826 0.00 0.00 33.58 4.02
108 109 2.040178 AGAGGACTTCAAACACTCGGT 58.960 47.619 0.00 0.00 33.58 4.69
109 110 2.224066 ACAGAGGACTTCAAACACTCGG 60.224 50.000 0.00 0.00 33.58 4.63
110 111 3.099267 ACAGAGGACTTCAAACACTCG 57.901 47.619 0.00 0.00 33.58 4.18
112 113 2.945668 GCAACAGAGGACTTCAAACACT 59.054 45.455 0.00 0.00 0.00 3.55
113 114 2.682856 TGCAACAGAGGACTTCAAACAC 59.317 45.455 0.00 0.00 0.00 3.32
114 115 2.945008 CTGCAACAGAGGACTTCAAACA 59.055 45.455 0.00 0.00 32.44 2.83
115 116 2.287248 GCTGCAACAGAGGACTTCAAAC 60.287 50.000 0.00 0.00 32.44 2.93
116 117 1.949525 GCTGCAACAGAGGACTTCAAA 59.050 47.619 0.00 0.00 32.44 2.69
117 118 1.597742 GCTGCAACAGAGGACTTCAA 58.402 50.000 0.00 0.00 32.44 2.69
118 119 0.601046 CGCTGCAACAGAGGACTTCA 60.601 55.000 0.00 0.00 32.44 3.02
119 120 0.601311 ACGCTGCAACAGAGGACTTC 60.601 55.000 0.00 0.00 35.65 3.01
120 121 0.601311 GACGCTGCAACAGAGGACTT 60.601 55.000 0.00 0.00 35.65 3.01
121 122 1.005630 GACGCTGCAACAGAGGACT 60.006 57.895 0.00 0.00 35.65 3.85
122 123 0.601311 AAGACGCTGCAACAGAGGAC 60.601 55.000 0.00 0.00 35.65 3.85
123 124 0.601046 CAAGACGCTGCAACAGAGGA 60.601 55.000 0.00 0.00 35.65 3.71
124 125 0.882042 ACAAGACGCTGCAACAGAGG 60.882 55.000 0.00 0.00 35.65 3.69
125 126 0.940126 AACAAGACGCTGCAACAGAG 59.060 50.000 0.00 0.00 37.31 3.35
127 128 0.931662 GCAACAAGACGCTGCAACAG 60.932 55.000 0.00 0.00 36.67 3.16
128 129 1.063972 GCAACAAGACGCTGCAACA 59.936 52.632 0.00 0.00 36.67 3.33
129 130 2.005537 CGCAACAAGACGCTGCAAC 61.006 57.895 0.00 0.00 36.45 4.17
130 131 1.154814 TACGCAACAAGACGCTGCAA 61.155 50.000 0.00 0.00 36.45 4.08
131 132 1.154814 TTACGCAACAAGACGCTGCA 61.155 50.000 0.00 0.00 36.45 4.41
133 134 0.859232 AGTTACGCAACAAGACGCTG 59.141 50.000 0.56 0.00 37.10 5.18
137 138 2.544267 AGCAAGAGTTACGCAACAAGAC 59.456 45.455 0.56 0.00 37.10 3.01
138 139 2.833794 AGCAAGAGTTACGCAACAAGA 58.166 42.857 0.56 0.00 37.10 3.02
139 140 3.609103 AAGCAAGAGTTACGCAACAAG 57.391 42.857 0.56 0.00 37.10 3.16
140 141 3.872182 TGTAAGCAAGAGTTACGCAACAA 59.128 39.130 0.56 0.00 37.10 2.83
141 142 3.459145 TGTAAGCAAGAGTTACGCAACA 58.541 40.909 0.56 0.00 37.10 3.33
142 143 4.663636 ATGTAAGCAAGAGTTACGCAAC 57.336 40.909 0.00 0.00 33.75 4.17
143 144 5.929992 AGTTATGTAAGCAAGAGTTACGCAA 59.070 36.000 0.00 0.00 33.75 4.85
144 145 5.475719 AGTTATGTAAGCAAGAGTTACGCA 58.524 37.500 0.00 0.00 33.75 5.24
147 148 8.758633 TTCAGAGTTATGTAAGCAAGAGTTAC 57.241 34.615 0.00 0.00 0.00 2.50
148 149 9.944376 ATTTCAGAGTTATGTAAGCAAGAGTTA 57.056 29.630 0.00 0.00 0.00 2.24
200 201 9.629878 TGGGTTGACATTTAACTTTAGAACTAA 57.370 29.630 0.00 0.00 0.00 2.24
201 202 9.802039 ATGGGTTGACATTTAACTTTAGAACTA 57.198 29.630 0.00 0.00 0.00 2.24
203 204 8.793592 AGATGGGTTGACATTTAACTTTAGAAC 58.206 33.333 0.00 0.00 0.00 3.01
204 205 8.792633 CAGATGGGTTGACATTTAACTTTAGAA 58.207 33.333 0.00 0.00 0.00 2.10
208 209 7.255942 CCTTCAGATGGGTTGACATTTAACTTT 60.256 37.037 0.00 0.00 0.00 2.66
209 210 6.209391 CCTTCAGATGGGTTGACATTTAACTT 59.791 38.462 0.00 0.00 0.00 2.66
211 212 5.476945 ACCTTCAGATGGGTTGACATTTAAC 59.523 40.000 7.26 0.00 30.80 2.01
212 213 5.476599 CACCTTCAGATGGGTTGACATTTAA 59.523 40.000 7.26 0.00 32.95 1.52
214 215 3.828451 CACCTTCAGATGGGTTGACATTT 59.172 43.478 7.26 0.00 32.95 2.32
215 216 3.074390 TCACCTTCAGATGGGTTGACATT 59.926 43.478 7.26 0.00 32.95 2.71
216 217 2.644299 TCACCTTCAGATGGGTTGACAT 59.356 45.455 7.26 0.00 32.95 3.06
220 221 1.352352 AGGTCACCTTCAGATGGGTTG 59.648 52.381 7.26 0.00 32.95 3.77
221 222 1.747444 AGGTCACCTTCAGATGGGTT 58.253 50.000 7.26 0.00 32.95 4.11
224 225 6.414732 TGTAAATAAGGTCACCTTCAGATGG 58.585 40.000 14.05 0.55 43.57 3.51
225 226 7.989741 AGATGTAAATAAGGTCACCTTCAGATG 59.010 37.037 14.05 0.00 43.57 2.90
226 227 8.095452 AGATGTAAATAAGGTCACCTTCAGAT 57.905 34.615 14.05 0.00 43.57 2.90
227 228 7.496346 AGATGTAAATAAGGTCACCTTCAGA 57.504 36.000 14.05 0.00 43.57 3.27
228 229 7.607991 ACAAGATGTAAATAAGGTCACCTTCAG 59.392 37.037 14.05 0.00 43.57 3.02
229 230 7.458397 ACAAGATGTAAATAAGGTCACCTTCA 58.542 34.615 14.05 4.67 43.57 3.02
232 233 7.016153 TGACAAGATGTAAATAAGGTCACCT 57.984 36.000 0.00 0.00 33.87 4.00
233 234 7.336931 ACATGACAAGATGTAAATAAGGTCACC 59.663 37.037 0.00 0.00 36.92 4.02
234 235 8.268850 ACATGACAAGATGTAAATAAGGTCAC 57.731 34.615 0.00 0.00 36.92 3.67
235 236 8.321353 AGACATGACAAGATGTAAATAAGGTCA 58.679 33.333 0.00 0.00 36.67 4.02
236 237 8.607459 CAGACATGACAAGATGTAAATAAGGTC 58.393 37.037 0.00 0.00 36.67 3.85
237 238 8.103305 ACAGACATGACAAGATGTAAATAAGGT 58.897 33.333 0.00 0.00 36.67 3.50
238 239 8.498054 ACAGACATGACAAGATGTAAATAAGG 57.502 34.615 0.00 0.00 36.67 2.69
254 255 7.441157 CACAAAGTCCTAAGTAAACAGACATGA 59.559 37.037 0.00 0.00 0.00 3.07
258 259 7.549615 AACACAAAGTCCTAAGTAAACAGAC 57.450 36.000 0.00 0.00 0.00 3.51
260 261 6.691388 GCAAACACAAAGTCCTAAGTAAACAG 59.309 38.462 0.00 0.00 0.00 3.16
272 274 4.291540 TCAGTCATGCAAACACAAAGTC 57.708 40.909 0.00 0.00 0.00 3.01
273 275 4.581824 AGATCAGTCATGCAAACACAAAGT 59.418 37.500 0.00 0.00 0.00 2.66
275 277 4.579753 TGAGATCAGTCATGCAAACACAAA 59.420 37.500 0.00 0.00 0.00 2.83
293 295 7.405292 TGGTGAAGTTTAGGATGAAATGAGAT 58.595 34.615 0.00 0.00 0.00 2.75
306 308 4.710324 TGTACAACCCTGGTGAAGTTTAG 58.290 43.478 0.00 0.00 0.00 1.85
307 309 4.445162 CCTGTACAACCCTGGTGAAGTTTA 60.445 45.833 0.00 0.00 0.00 2.01
335 337 1.408822 GCCCCTGATACAGAAACCAGG 60.409 57.143 0.00 0.00 44.29 4.45
420 422 7.172532 CAGTTAACATTCTAGCTTTGTACACCA 59.827 37.037 8.61 0.00 0.00 4.17
454 2467 3.980646 ATAAACACACAACACATGCGT 57.019 38.095 0.00 0.00 0.00 5.24
455 2468 5.912396 ACTAAATAAACACACAACACATGCG 59.088 36.000 0.00 0.00 0.00 4.73
463 2483 7.495279 ACCGAGTTACACTAAATAAACACACAA 59.505 33.333 0.00 0.00 0.00 3.33
469 2489 7.062722 GTCTCCACCGAGTTACACTAAATAAAC 59.937 40.741 0.00 0.00 37.40 2.01
474 2494 3.890756 TGTCTCCACCGAGTTACACTAAA 59.109 43.478 0.00 0.00 37.40 1.85
487 2507 1.605712 CCAACTCGTCTTGTCTCCACC 60.606 57.143 0.00 0.00 0.00 4.61
499 2520 0.841289 TTCCTGAAACCCCAACTCGT 59.159 50.000 0.00 0.00 0.00 4.18
501 2522 3.318275 GTCTTTTCCTGAAACCCCAACTC 59.682 47.826 0.00 0.00 0.00 3.01
507 2528 4.119862 GCTTTTGTCTTTTCCTGAAACCC 58.880 43.478 0.00 0.00 0.00 4.11
529 2550 4.471904 TGAAACAGCCTCCACTACTATG 57.528 45.455 0.00 0.00 0.00 2.23
530 2551 5.499004 TTTGAAACAGCCTCCACTACTAT 57.501 39.130 0.00 0.00 0.00 2.12
531 2552 4.967084 TTTGAAACAGCCTCCACTACTA 57.033 40.909 0.00 0.00 0.00 1.82
578 3784 1.737236 CGGATGAACAGCAAATTCCGA 59.263 47.619 3.17 0.00 45.22 4.55
579 3785 1.202177 CCGGATGAACAGCAAATTCCG 60.202 52.381 0.00 2.32 43.16 4.30
580 3786 2.091541 TCCGGATGAACAGCAAATTCC 58.908 47.619 0.00 0.00 0.00 3.01
581 3787 2.478539 GCTCCGGATGAACAGCAAATTC 60.479 50.000 3.57 0.00 0.00 2.17
582 3788 1.474077 GCTCCGGATGAACAGCAAATT 59.526 47.619 3.57 0.00 0.00 1.82
583 3789 1.098050 GCTCCGGATGAACAGCAAAT 58.902 50.000 3.57 0.00 0.00 2.32
584 3790 0.036732 AGCTCCGGATGAACAGCAAA 59.963 50.000 3.57 0.00 34.08 3.68
585 3791 0.391661 GAGCTCCGGATGAACAGCAA 60.392 55.000 3.57 0.00 34.08 3.91
586 3792 1.219124 GAGCTCCGGATGAACAGCA 59.781 57.895 3.57 0.00 34.08 4.41
589 3795 2.027285 TCATTTGAGCTCCGGATGAACA 60.027 45.455 12.15 0.14 0.00 3.18
590 3796 2.611292 CTCATTTGAGCTCCGGATGAAC 59.389 50.000 12.15 0.00 35.13 3.18
591 3797 2.910199 CTCATTTGAGCTCCGGATGAA 58.090 47.619 12.15 0.00 35.13 2.57
592 3798 2.609427 CTCATTTGAGCTCCGGATGA 57.391 50.000 12.15 15.63 35.13 2.92
602 3808 4.891627 TCTACTCTCGAGCTCATTTGAG 57.108 45.455 15.40 15.71 44.75 3.02
603 3809 4.097135 CCTTCTACTCTCGAGCTCATTTGA 59.903 45.833 15.40 1.44 0.00 2.69
604 3810 4.358851 CCTTCTACTCTCGAGCTCATTTG 58.641 47.826 15.40 3.44 0.00 2.32
605 3811 3.383185 CCCTTCTACTCTCGAGCTCATTT 59.617 47.826 15.40 0.00 0.00 2.32
606 3812 2.955660 CCCTTCTACTCTCGAGCTCATT 59.044 50.000 15.40 0.00 0.00 2.57
607 3813 2.582052 CCCTTCTACTCTCGAGCTCAT 58.418 52.381 15.40 0.00 0.00 2.90
608 3814 1.408961 CCCCTTCTACTCTCGAGCTCA 60.409 57.143 15.40 0.00 0.00 4.26
609 3815 1.134037 TCCCCTTCTACTCTCGAGCTC 60.134 57.143 7.81 2.73 0.00 4.09
610 3816 0.920438 TCCCCTTCTACTCTCGAGCT 59.080 55.000 7.81 0.00 0.00 4.09
611 3817 1.765230 TTCCCCTTCTACTCTCGAGC 58.235 55.000 7.81 0.00 0.00 5.03
612 3818 3.129638 CACTTTCCCCTTCTACTCTCGAG 59.870 52.174 5.93 5.93 0.00 4.04
613 3819 3.090037 CACTTTCCCCTTCTACTCTCGA 58.910 50.000 0.00 0.00 0.00 4.04
614 3820 2.826725 ACACTTTCCCCTTCTACTCTCG 59.173 50.000 0.00 0.00 0.00 4.04
615 3821 4.893829 AACACTTTCCCCTTCTACTCTC 57.106 45.455 0.00 0.00 0.00 3.20
616 3822 5.648330 AAAACACTTTCCCCTTCTACTCT 57.352 39.130 0.00 0.00 0.00 3.24
617 3823 7.119407 GTGATAAAACACTTTCCCCTTCTACTC 59.881 40.741 0.00 0.00 37.73 2.59
618 3824 6.940867 GTGATAAAACACTTTCCCCTTCTACT 59.059 38.462 0.00 0.00 37.73 2.57
619 3825 6.128363 CGTGATAAAACACTTTCCCCTTCTAC 60.128 42.308 0.00 0.00 38.47 2.59
620 3826 5.935789 CGTGATAAAACACTTTCCCCTTCTA 59.064 40.000 0.00 0.00 38.47 2.10
621 3827 4.760204 CGTGATAAAACACTTTCCCCTTCT 59.240 41.667 0.00 0.00 38.47 2.85
622 3828 4.758165 TCGTGATAAAACACTTTCCCCTTC 59.242 41.667 0.00 0.00 38.47 3.46
623 3829 4.721132 TCGTGATAAAACACTTTCCCCTT 58.279 39.130 0.00 0.00 38.47 3.95
624 3830 4.360951 TCGTGATAAAACACTTTCCCCT 57.639 40.909 0.00 0.00 38.47 4.79
625 3831 5.638596 ATTCGTGATAAAACACTTTCCCC 57.361 39.130 0.00 0.00 38.47 4.81
626 3832 7.700656 CCATTATTCGTGATAAAACACTTTCCC 59.299 37.037 0.00 0.00 38.47 3.97
627 3833 7.700656 CCCATTATTCGTGATAAAACACTTTCC 59.299 37.037 0.00 0.00 38.47 3.13
628 3834 7.700656 CCCCATTATTCGTGATAAAACACTTTC 59.299 37.037 0.00 0.00 38.47 2.62
629 3835 7.543756 CCCCATTATTCGTGATAAAACACTTT 58.456 34.615 0.00 0.00 38.47 2.66
630 3836 6.405397 GCCCCATTATTCGTGATAAAACACTT 60.405 38.462 0.00 0.00 38.47 3.16
631 3837 5.067283 GCCCCATTATTCGTGATAAAACACT 59.933 40.000 0.00 0.00 38.47 3.55
632 3838 5.067283 AGCCCCATTATTCGTGATAAAACAC 59.933 40.000 0.00 0.00 34.06 3.32
638 3844 3.901222 TCAGAGCCCCATTATTCGTGATA 59.099 43.478 0.00 0.00 0.00 2.15
658 3864 1.198408 ACGTAGCGACTTCGTCATTCA 59.802 47.619 0.00 0.00 42.22 2.57
666 3872 3.417690 AGTATTGGACGTAGCGACTTC 57.582 47.619 0.00 0.00 0.00 3.01
737 3979 6.756542 AGCTAAATGTGGACTTCAAACAAAAC 59.243 34.615 0.00 0.00 0.00 2.43
747 3989 2.162681 GTGGCAGCTAAATGTGGACTT 58.837 47.619 0.00 0.00 0.00 3.01
789 4031 0.946221 GGATGGTAGATGCGGCTTCG 60.946 60.000 9.84 0.00 0.00 3.79
796 4038 3.037431 CAGCTAGTGGATGGTAGATGC 57.963 52.381 0.00 0.00 0.00 3.91
817 4062 0.107361 TCATCATGGTGGCTCAGCTG 60.107 55.000 7.63 7.63 32.61 4.24
884 4137 5.623956 TTCCTTCTCACACCTGTTTTCTA 57.376 39.130 0.00 0.00 0.00 2.10
886 4139 4.216472 GGATTCCTTCTCACACCTGTTTTC 59.784 45.833 0.00 0.00 0.00 2.29
890 4143 1.630878 GGGATTCCTTCTCACACCTGT 59.369 52.381 2.01 0.00 0.00 4.00
891 4144 1.065126 GGGGATTCCTTCTCACACCTG 60.065 57.143 2.01 0.00 0.00 4.00
892 4145 1.203492 AGGGGATTCCTTCTCACACCT 60.203 52.381 2.01 0.00 45.47 4.00
894 4147 4.569719 TTTAGGGGATTCCTTCTCACAC 57.430 45.455 2.01 0.00 45.47 3.82
895 4148 4.352595 TGTTTTAGGGGATTCCTTCTCACA 59.647 41.667 2.01 3.35 45.47 3.58
896 4149 4.918588 TGTTTTAGGGGATTCCTTCTCAC 58.081 43.478 2.01 1.17 45.47 3.51
897 4150 4.018415 CCTGTTTTAGGGGATTCCTTCTCA 60.018 45.833 2.01 0.00 45.47 3.27
898 4151 4.527944 CCTGTTTTAGGGGATTCCTTCTC 58.472 47.826 2.01 0.00 45.47 2.87
910 4163 3.704197 TGCATCGCACACCTGTTTTAGG 61.704 50.000 0.00 0.00 42.72 2.69
911 4164 1.535028 TGCATCGCACACCTGTTTTAG 59.465 47.619 0.00 0.00 31.71 1.85
912 4165 1.598882 TGCATCGCACACCTGTTTTA 58.401 45.000 0.00 0.00 31.71 1.52
913 4166 0.743688 TTGCATCGCACACCTGTTTT 59.256 45.000 0.00 0.00 38.71 2.43
914 4167 0.743688 TTTGCATCGCACACCTGTTT 59.256 45.000 0.00 0.00 38.71 2.83
971 4232 0.394625 GGTGGGTTTTATAGCGGGCA 60.395 55.000 0.00 0.00 0.00 5.36
976 4283 4.335594 GTGATGAGTGGTGGGTTTTATAGC 59.664 45.833 0.00 0.00 0.00 2.97
996 4303 1.317613 GAGGTTGTGGTTGCATGTGA 58.682 50.000 0.00 0.00 0.00 3.58
997 4304 1.031235 TGAGGTTGTGGTTGCATGTG 58.969 50.000 0.00 0.00 0.00 3.21
998 4305 1.032014 GTGAGGTTGTGGTTGCATGT 58.968 50.000 0.00 0.00 0.00 3.21
1044 9874 0.908198 GCAAGAGGATGGAGGTCACT 59.092 55.000 0.00 0.00 0.00 3.41
1045 9875 0.460987 CGCAAGAGGATGGAGGTCAC 60.461 60.000 0.00 0.00 43.02 3.67
1084 9914 0.468226 TGTGTGGACTGGACAAGGAC 59.532 55.000 0.00 0.00 0.00 3.85
1385 11565 1.406180 TCGTGGTATGGATGTGGTACG 59.594 52.381 0.00 0.00 0.00 3.67
1514 11694 3.036084 CGTCGTTGAAGCTGGCGT 61.036 61.111 0.00 0.00 0.00 5.68
1550 11730 3.810687 TTGCCCCTCCAGGTGGACT 62.811 63.158 9.36 0.00 39.78 3.85
1579 11759 1.229690 TGGAGTTGAATCCCGGGGA 60.230 57.895 23.50 20.15 38.72 4.81
1594 11774 1.134753 CTTGTTGTTGCACAAGCTGGA 59.865 47.619 0.00 0.00 45.43 3.86
1812 15252 2.504274 AACGTCCGAGTCAGGGCAA 61.504 57.895 6.46 0.00 35.10 4.52
2010 15453 4.404098 ATCCACGGGGCCACGTTC 62.404 66.667 34.85 0.00 46.25 3.95
2508 19025 2.427245 CGGCTTGAGGATCTCGGGT 61.427 63.158 0.00 0.00 34.92 5.28
2606 19123 5.268387 AGATGATGTTGTACTCCACTCTCT 58.732 41.667 0.00 0.00 0.00 3.10
2760 19277 0.460987 CGCTGTCCAAGATGTCCCTC 60.461 60.000 0.00 0.00 0.00 4.30
2952 19469 2.328099 GCACTTGTTCAGCTCCGGG 61.328 63.158 0.00 0.00 0.00 5.73
3405 19963 9.144747 TGATTCTTCTTCTTCTTCTTCATTACG 57.855 33.333 0.00 0.00 0.00 3.18
3444 20002 2.514803 TCTCCTCATCACGAGTTCACA 58.485 47.619 0.00 0.00 40.48 3.58
3452 20010 7.719778 TGATTATTCATTTCTCCTCATCACG 57.280 36.000 0.00 0.00 0.00 4.35
3508 20068 7.040271 TGGACGATGATCCATACGAAATTACTA 60.040 37.037 0.00 0.00 44.14 1.82
3509 20069 6.157211 GGACGATGATCCATACGAAATTACT 58.843 40.000 0.00 0.00 38.77 2.24
3510 20070 5.924254 TGGACGATGATCCATACGAAATTAC 59.076 40.000 0.00 0.00 44.14 1.89
3556 20303 5.364446 TGCGGGTCTAAGGATTGAAACTATA 59.636 40.000 0.00 0.00 0.00 1.31
3570 20317 4.218635 TGCAAAATGTAAATGCGGGTCTAA 59.781 37.500 0.00 0.00 42.91 2.10
3594 20341 0.530288 GTCAGACACTGAGAGAGCCC 59.470 60.000 1.53 0.00 41.46 5.19
3608 20355 3.716353 ACCAAGGTATATGCATGGTCAGA 59.284 43.478 10.16 0.00 40.23 3.27
3646 20397 9.305555 ACGAGTAATTTGGAATATACCTAGCTA 57.694 33.333 0.00 0.00 0.00 3.32
3647 20398 8.191534 ACGAGTAATTTGGAATATACCTAGCT 57.808 34.615 0.00 0.00 0.00 3.32
3648 20399 7.272948 CGACGAGTAATTTGGAATATACCTAGC 59.727 40.741 0.00 0.00 0.00 3.42
3649 20400 8.295288 ACGACGAGTAATTTGGAATATACCTAG 58.705 37.037 0.00 0.00 0.00 3.02
3650 20401 8.169977 ACGACGAGTAATTTGGAATATACCTA 57.830 34.615 0.00 0.00 0.00 3.08
3651 20402 7.047460 ACGACGAGTAATTTGGAATATACCT 57.953 36.000 0.00 0.00 0.00 3.08
3652 20403 8.292448 TCTACGACGAGTAATTTGGAATATACC 58.708 37.037 0.00 0.00 34.45 2.73
3653 20404 9.669353 TTCTACGACGAGTAATTTGGAATATAC 57.331 33.333 0.00 0.00 34.45 1.47
3655 20406 9.760077 ATTTCTACGACGAGTAATTTGGAATAT 57.240 29.630 0.00 0.00 34.45 1.28
3656 20407 9.027129 CATTTCTACGACGAGTAATTTGGAATA 57.973 33.333 0.00 0.00 34.45 1.75
3657 20408 7.762615 TCATTTCTACGACGAGTAATTTGGAAT 59.237 33.333 0.00 0.00 34.45 3.01
3658 20409 7.092079 TCATTTCTACGACGAGTAATTTGGAA 58.908 34.615 0.00 0.00 34.45 3.53
3659 20410 6.623486 TCATTTCTACGACGAGTAATTTGGA 58.377 36.000 0.00 0.00 34.45 3.53
3660 20411 6.880822 TCATTTCTACGACGAGTAATTTGG 57.119 37.500 0.00 0.00 34.45 3.28
3661 20412 8.380644 ACATTCATTTCTACGACGAGTAATTTG 58.619 33.333 0.00 2.12 34.45 2.32
3662 20413 8.475331 ACATTCATTTCTACGACGAGTAATTT 57.525 30.769 0.00 0.00 34.45 1.82
3663 20414 9.745880 ATACATTCATTTCTACGACGAGTAATT 57.254 29.630 0.00 0.00 34.45 1.40
3664 20415 9.395707 GATACATTCATTTCTACGACGAGTAAT 57.604 33.333 0.00 0.00 34.45 1.89
3665 20416 8.618677 AGATACATTCATTTCTACGACGAGTAA 58.381 33.333 0.00 0.00 34.45 2.24
3666 20417 8.151141 AGATACATTCATTTCTACGACGAGTA 57.849 34.615 0.00 0.00 0.00 2.59
3667 20418 7.028926 AGATACATTCATTTCTACGACGAGT 57.971 36.000 0.00 0.00 0.00 4.18
3668 20419 8.496751 TCTAGATACATTCATTTCTACGACGAG 58.503 37.037 0.00 0.00 0.00 4.18
3669 20420 8.374327 TCTAGATACATTCATTTCTACGACGA 57.626 34.615 0.00 0.00 0.00 4.20
3670 20421 8.893884 GTTCTAGATACATTCATTTCTACGACG 58.106 37.037 0.00 0.00 0.00 5.12
3671 20422 9.953697 AGTTCTAGATACATTCATTTCTACGAC 57.046 33.333 0.00 0.00 0.00 4.34
3700 20451 8.700051 GCAGGTATGGATGTATCTAGATGTATT 58.300 37.037 15.79 0.00 0.00 1.89
3701 20452 7.013750 CGCAGGTATGGATGTATCTAGATGTAT 59.986 40.741 15.79 9.11 0.00 2.29
3702 20453 6.318900 CGCAGGTATGGATGTATCTAGATGTA 59.681 42.308 15.79 4.44 0.00 2.29
3703 20454 5.126222 CGCAGGTATGGATGTATCTAGATGT 59.874 44.000 15.79 1.25 0.00 3.06
3704 20455 5.358160 TCGCAGGTATGGATGTATCTAGATG 59.642 44.000 15.79 0.00 0.00 2.90
3705 20456 5.358442 GTCGCAGGTATGGATGTATCTAGAT 59.642 44.000 10.73 10.73 0.00 1.98
3706 20457 4.700692 GTCGCAGGTATGGATGTATCTAGA 59.299 45.833 0.00 0.00 0.00 2.43
3707 20458 4.459337 TGTCGCAGGTATGGATGTATCTAG 59.541 45.833 0.00 0.00 0.00 2.43
3708 20459 4.403734 TGTCGCAGGTATGGATGTATCTA 58.596 43.478 0.00 0.00 0.00 1.98
3709 20460 3.230976 TGTCGCAGGTATGGATGTATCT 58.769 45.455 0.00 0.00 0.00 1.98
3710 20461 3.660501 TGTCGCAGGTATGGATGTATC 57.339 47.619 0.00 0.00 0.00 2.24
3711 20462 3.388024 ACTTGTCGCAGGTATGGATGTAT 59.612 43.478 0.00 0.00 0.00 2.29
3712 20463 2.764010 ACTTGTCGCAGGTATGGATGTA 59.236 45.455 0.00 0.00 0.00 2.29
3713 20464 1.555075 ACTTGTCGCAGGTATGGATGT 59.445 47.619 0.00 0.00 0.00 3.06
3714 20465 2.315925 ACTTGTCGCAGGTATGGATG 57.684 50.000 0.00 0.00 0.00 3.51
3715 20466 4.689612 ATTACTTGTCGCAGGTATGGAT 57.310 40.909 3.46 0.00 0.00 3.41
3716 20467 4.439057 GAATTACTTGTCGCAGGTATGGA 58.561 43.478 3.46 0.00 0.00 3.41
3717 20468 3.245284 CGAATTACTTGTCGCAGGTATGG 59.755 47.826 3.46 0.00 0.00 2.74
3718 20469 4.109766 TCGAATTACTTGTCGCAGGTATG 58.890 43.478 3.46 0.00 37.19 2.39
3719 20470 4.380841 TCGAATTACTTGTCGCAGGTAT 57.619 40.909 3.46 0.00 37.19 2.73
3720 20471 3.853831 TCGAATTACTTGTCGCAGGTA 57.146 42.857 0.00 0.00 37.19 3.08
3721 20472 2.736144 TCGAATTACTTGTCGCAGGT 57.264 45.000 0.00 0.91 37.19 4.00
3722 20473 3.720920 CGTTTCGAATTACTTGTCGCAGG 60.721 47.826 0.00 0.00 37.19 4.85
3723 20474 3.395671 CGTTTCGAATTACTTGTCGCAG 58.604 45.455 0.00 0.00 37.19 5.18
3724 20475 2.156117 CCGTTTCGAATTACTTGTCGCA 59.844 45.455 0.00 0.00 37.19 5.10
3725 20476 2.409378 TCCGTTTCGAATTACTTGTCGC 59.591 45.455 0.00 0.00 37.19 5.19
3726 20477 3.060363 CCTCCGTTTCGAATTACTTGTCG 59.940 47.826 0.00 0.00 38.62 4.35
3727 20478 3.370061 CCCTCCGTTTCGAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
3728 20479 3.007182 TCCCTCCGTTTCGAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
3729 20480 3.592059 TCCCTCCGTTTCGAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
3730 20481 3.260128 ACTCCCTCCGTTTCGAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
3731 20482 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
3732 20483 3.242549 ACTCCCTCCGTTTCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
3733 20484 4.096984 GTCTACTCCCTCCGTTTCGAATTA 59.903 45.833 0.00 0.00 0.00 1.40
3734 20485 3.094572 TCTACTCCCTCCGTTTCGAATT 58.905 45.455 0.00 0.00 0.00 2.17
3735 20486 2.426381 GTCTACTCCCTCCGTTTCGAAT 59.574 50.000 0.00 0.00 0.00 3.34
3736 20487 1.815003 GTCTACTCCCTCCGTTTCGAA 59.185 52.381 0.00 0.00 0.00 3.71
3737 20488 1.004044 AGTCTACTCCCTCCGTTTCGA 59.996 52.381 0.00 0.00 0.00 3.71
3738 20489 1.132643 CAGTCTACTCCCTCCGTTTCG 59.867 57.143 0.00 0.00 0.00 3.46
3739 20490 1.477295 CCAGTCTACTCCCTCCGTTTC 59.523 57.143 0.00 0.00 0.00 2.78
3740 20491 1.203149 ACCAGTCTACTCCCTCCGTTT 60.203 52.381 0.00 0.00 0.00 3.60
3741 20492 0.408700 ACCAGTCTACTCCCTCCGTT 59.591 55.000 0.00 0.00 0.00 4.44
3742 20493 1.212441 CTACCAGTCTACTCCCTCCGT 59.788 57.143 0.00 0.00 0.00 4.69
3743 20494 1.489649 TCTACCAGTCTACTCCCTCCG 59.510 57.143 0.00 0.00 0.00 4.63
3744 20495 2.510800 ACTCTACCAGTCTACTCCCTCC 59.489 54.545 0.00 0.00 0.00 4.30
3745 20496 3.937778 ACTCTACCAGTCTACTCCCTC 57.062 52.381 0.00 0.00 0.00 4.30
3746 20497 4.373495 AGTACTCTACCAGTCTACTCCCT 58.627 47.826 0.00 0.00 36.43 4.20
3747 20498 4.776435 AGTACTCTACCAGTCTACTCCC 57.224 50.000 0.00 0.00 36.43 4.30
3748 20499 5.743117 TCAAGTACTCTACCAGTCTACTCC 58.257 45.833 0.00 0.00 36.43 3.85
3749 20500 6.642430 TCTCAAGTACTCTACCAGTCTACTC 58.358 44.000 0.00 0.00 36.43 2.59
3750 20501 6.623979 TCTCAAGTACTCTACCAGTCTACT 57.376 41.667 0.00 0.00 36.43 2.57
3791 20542 1.672881 AGTATGGCGTACAGTACCGAC 59.327 52.381 18.51 3.60 35.67 4.79
3792 20543 1.942657 GAGTATGGCGTACAGTACCGA 59.057 52.381 18.51 0.00 35.67 4.69
3793 20544 1.002033 GGAGTATGGCGTACAGTACCG 60.002 57.143 18.51 2.14 35.67 4.02
3794 20545 1.339291 GGGAGTATGGCGTACAGTACC 59.661 57.143 18.51 14.26 35.67 3.34
3805 20556 2.781681 AACAAACGGAGGGAGTATGG 57.218 50.000 0.00 0.00 0.00 2.74
3810 20561 5.278604 CAAACTAAAAACAAACGGAGGGAG 58.721 41.667 0.00 0.00 0.00 4.30
3811 20562 4.440387 GCAAACTAAAAACAAACGGAGGGA 60.440 41.667 0.00 0.00 0.00 4.20
3812 20563 3.799963 GCAAACTAAAAACAAACGGAGGG 59.200 43.478 0.00 0.00 0.00 4.30
3813 20564 4.425520 TGCAAACTAAAAACAAACGGAGG 58.574 39.130 0.00 0.00 0.00 4.30
3814 20565 7.867445 ATATGCAAACTAAAAACAAACGGAG 57.133 32.000 0.00 0.00 0.00 4.63
3815 20566 9.400638 CTTATATGCAAACTAAAAACAAACGGA 57.599 29.630 0.00 0.00 0.00 4.69
3816 20567 9.400638 TCTTATATGCAAACTAAAAACAAACGG 57.599 29.630 0.00 0.00 0.00 4.44
3828 20579 8.806146 ACTTTGACCAAATCTTATATGCAAACT 58.194 29.630 0.00 0.00 0.00 2.66
3829 20580 8.986477 ACTTTGACCAAATCTTATATGCAAAC 57.014 30.769 0.00 0.00 0.00 2.93
3830 20581 8.801299 TGACTTTGACCAAATCTTATATGCAAA 58.199 29.630 0.00 0.00 0.00 3.68
3831 20582 8.347004 TGACTTTGACCAAATCTTATATGCAA 57.653 30.769 0.00 0.00 0.00 4.08
3832 20583 7.936496 TGACTTTGACCAAATCTTATATGCA 57.064 32.000 0.00 0.00 0.00 3.96
3833 20584 9.076596 GTTTGACTTTGACCAAATCTTATATGC 57.923 33.333 0.00 0.00 35.14 3.14
3988 20739 8.145122 TGGTCAAAGTCAAAGTTTGTAAAGTTT 58.855 29.630 15.08 8.69 41.01 2.66
3989 20740 7.662897 TGGTCAAAGTCAAAGTTTGTAAAGTT 58.337 30.769 15.08 3.16 39.07 2.66
3990 20741 7.222000 TGGTCAAAGTCAAAGTTTGTAAAGT 57.778 32.000 15.08 0.00 39.07 2.66
3991 20742 8.527567 TTTGGTCAAAGTCAAAGTTTGTAAAG 57.472 30.769 15.08 4.02 39.07 1.85
3992 20743 9.145865 GATTTGGTCAAAGTCAAAGTTTGTAAA 57.854 29.630 15.08 0.00 39.07 2.01
3993 20744 8.527810 AGATTTGGTCAAAGTCAAAGTTTGTAA 58.472 29.630 15.08 0.00 39.07 2.41
3994 20745 8.062065 AGATTTGGTCAAAGTCAAAGTTTGTA 57.938 30.769 15.08 0.03 39.07 2.41
3995 20746 6.935167 AGATTTGGTCAAAGTCAAAGTTTGT 58.065 32.000 15.08 0.00 39.07 2.83
3996 20747 7.832503 AAGATTTGGTCAAAGTCAAAGTTTG 57.167 32.000 9.44 9.44 39.30 2.93
4000 20751 9.294030 GCATATAAGATTTGGTCAAAGTCAAAG 57.706 33.333 2.55 0.00 36.49 2.77
4001 20752 8.801299 TGCATATAAGATTTGGTCAAAGTCAAA 58.199 29.630 2.55 0.00 37.29 2.69
4002 20753 8.347004 TGCATATAAGATTTGGTCAAAGTCAA 57.653 30.769 2.55 0.00 33.32 3.18
4003 20754 7.828717 TCTGCATATAAGATTTGGTCAAAGTCA 59.171 33.333 2.55 0.00 33.32 3.41
4004 20755 8.125448 GTCTGCATATAAGATTTGGTCAAAGTC 58.875 37.037 2.55 1.51 33.32 3.01
4005 20756 7.831193 AGTCTGCATATAAGATTTGGTCAAAGT 59.169 33.333 2.55 0.00 33.32 2.66
4006 20757 8.218338 AGTCTGCATATAAGATTTGGTCAAAG 57.782 34.615 2.55 0.00 33.32 2.77
4007 20758 9.679661 TTAGTCTGCATATAAGATTTGGTCAAA 57.320 29.630 0.00 0.00 34.46 2.69
4008 20759 9.679661 TTTAGTCTGCATATAAGATTTGGTCAA 57.320 29.630 0.00 0.00 0.00 3.18
4009 20760 9.679661 TTTTAGTCTGCATATAAGATTTGGTCA 57.320 29.630 0.00 0.00 0.00 4.02
4017 20768 8.879759 CCGTTTCTTTTTAGTCTGCATATAAGA 58.120 33.333 0.00 0.00 0.00 2.10
4018 20769 8.879759 TCCGTTTCTTTTTAGTCTGCATATAAG 58.120 33.333 0.00 0.00 0.00 1.73
4019 20770 8.780846 TCCGTTTCTTTTTAGTCTGCATATAA 57.219 30.769 0.00 0.00 0.00 0.98
4020 20771 8.255206 TCTCCGTTTCTTTTTAGTCTGCATATA 58.745 33.333 0.00 0.00 0.00 0.86
4021 20772 7.103641 TCTCCGTTTCTTTTTAGTCTGCATAT 58.896 34.615 0.00 0.00 0.00 1.78
4022 20773 6.460781 TCTCCGTTTCTTTTTAGTCTGCATA 58.539 36.000 0.00 0.00 0.00 3.14
4023 20774 5.305585 TCTCCGTTTCTTTTTAGTCTGCAT 58.694 37.500 0.00 0.00 0.00 3.96
4024 20775 4.699637 TCTCCGTTTCTTTTTAGTCTGCA 58.300 39.130 0.00 0.00 0.00 4.41
4025 20776 4.989168 TCTCTCCGTTTCTTTTTAGTCTGC 59.011 41.667 0.00 0.00 0.00 4.26
4026 20777 6.217294 ACTCTCTCCGTTTCTTTTTAGTCTG 58.783 40.000 0.00 0.00 0.00 3.51
4027 20778 6.408107 ACTCTCTCCGTTTCTTTTTAGTCT 57.592 37.500 0.00 0.00 0.00 3.24
4028 20779 6.305160 CGTACTCTCTCCGTTTCTTTTTAGTC 59.695 42.308 0.00 0.00 0.00 2.59
4029 20780 6.148264 CGTACTCTCTCCGTTTCTTTTTAGT 58.852 40.000 0.00 0.00 0.00 2.24
4030 20781 6.148264 ACGTACTCTCTCCGTTTCTTTTTAG 58.852 40.000 0.00 0.00 0.00 1.85
4031 20782 6.016777 AGACGTACTCTCTCCGTTTCTTTTTA 60.017 38.462 0.00 0.00 34.51 1.52
4032 20783 4.941657 ACGTACTCTCTCCGTTTCTTTTT 58.058 39.130 0.00 0.00 0.00 1.94
4033 20784 4.277921 AGACGTACTCTCTCCGTTTCTTTT 59.722 41.667 0.00 0.00 34.51 2.27
4034 20785 3.819902 AGACGTACTCTCTCCGTTTCTTT 59.180 43.478 0.00 0.00 34.51 2.52
4035 20786 3.410508 AGACGTACTCTCTCCGTTTCTT 58.589 45.455 0.00 0.00 34.51 2.52
4036 20787 3.056588 AGACGTACTCTCTCCGTTTCT 57.943 47.619 0.00 0.00 34.51 2.52
4037 20788 3.828060 AAGACGTACTCTCTCCGTTTC 57.172 47.619 0.00 0.00 34.51 2.78
4038 20789 4.759183 AGTTAAGACGTACTCTCTCCGTTT 59.241 41.667 0.00 0.00 34.51 3.60
4039 20790 4.322567 AGTTAAGACGTACTCTCTCCGTT 58.677 43.478 0.00 0.00 34.51 4.44
4040 20791 3.936564 AGTTAAGACGTACTCTCTCCGT 58.063 45.455 0.00 0.00 37.56 4.69
4041 20792 4.153835 ACAAGTTAAGACGTACTCTCTCCG 59.846 45.833 0.00 0.00 0.00 4.63
4042 20793 5.625921 ACAAGTTAAGACGTACTCTCTCC 57.374 43.478 0.00 0.00 0.00 3.71
4043 20794 6.666417 TCAACAAGTTAAGACGTACTCTCTC 58.334 40.000 0.00 0.00 0.00 3.20
4044 20795 6.630444 TCAACAAGTTAAGACGTACTCTCT 57.370 37.500 0.00 0.00 0.00 3.10
4045 20796 7.060864 GTCATCAACAAGTTAAGACGTACTCTC 59.939 40.741 0.00 0.00 0.00 3.20
4046 20797 6.862090 GTCATCAACAAGTTAAGACGTACTCT 59.138 38.462 0.00 0.00 0.00 3.24
4047 20798 6.089150 GGTCATCAACAAGTTAAGACGTACTC 59.911 42.308 0.00 0.00 0.00 2.59
4048 20799 5.924825 GGTCATCAACAAGTTAAGACGTACT 59.075 40.000 0.00 0.00 0.00 2.73
4049 20800 5.924825 AGGTCATCAACAAGTTAAGACGTAC 59.075 40.000 0.00 0.00 0.00 3.67
4050 20801 5.924254 CAGGTCATCAACAAGTTAAGACGTA 59.076 40.000 0.00 0.00 0.00 3.57
4051 20802 4.750098 CAGGTCATCAACAAGTTAAGACGT 59.250 41.667 0.00 0.00 0.00 4.34
4092 20843 6.821665 TCCAATACTTCCAGCACATACTTTAC 59.178 38.462 0.00 0.00 0.00 2.01
4181 20932 8.827832 AAGGGAGTATTTCAAATCAATGATGA 57.172 30.769 0.00 0.00 40.57 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.