Multiple sequence alignment - TraesCS5A01G194300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G194300 chr5A 100.000 8938 0 0 1 8938 397753383 397762320 0.000000e+00 16506.0
1 TraesCS5A01G194300 chr5A 94.659 3164 131 18 1161 4316 397523074 397526207 0.000000e+00 4872.0
2 TraesCS5A01G194300 chr5A 94.084 3144 138 17 5082 8199 397516418 397519539 0.000000e+00 4732.0
3 TraesCS5A01G194300 chr5A 94.061 3132 134 21 5082 8186 397527143 397530249 0.000000e+00 4706.0
4 TraesCS5A01G194300 chr5A 94.361 1401 72 6 2819 4215 397514009 397515406 0.000000e+00 2143.0
5 TraesCS5A01G194300 chr5A 95.455 1320 51 5 1426 2742 397510758 397512071 0.000000e+00 2097.0
6 TraesCS5A01G194300 chr5A 94.110 781 29 8 4311 5080 397526326 397527100 0.000000e+00 1171.0
7 TraesCS5A01G194300 chr5A 91.476 786 56 2 4311 5086 397515597 397516381 0.000000e+00 1070.0
8 TraesCS5A01G194300 chr5A 88.197 932 55 24 181 1085 397521972 397522875 0.000000e+00 1061.0
9 TraesCS5A01G194300 chr5A 92.380 748 46 6 4311 5047 397561890 397562637 0.000000e+00 1055.0
10 TraesCS5A01G194300 chr5A 94.746 590 21 5 8353 8938 521755127 521754544 0.000000e+00 909.0
11 TraesCS5A01G194300 chr5A 92.637 584 26 7 515 1085 397509280 397509859 0.000000e+00 824.0
12 TraesCS5A01G194300 chr5A 94.161 137 7 1 1 136 523805873 523805737 3.270000e-49 207.0
13 TraesCS5A01G194300 chr5A 93.284 134 8 1 1 133 257286012 257286145 7.080000e-46 196.0
14 TraesCS5A01G194300 chr5A 88.806 134 7 2 2708 2833 397512168 397512301 3.340000e-34 158.0
15 TraesCS5A01G194300 chr5A 93.023 86 6 0 4231 4316 397515393 397515478 9.420000e-25 126.0
16 TraesCS5A01G194300 chr5A 96.721 61 1 1 133 192 397753408 397753468 5.710000e-17 100.0
17 TraesCS5A01G194300 chr5A 93.443 61 3 1 133 192 523805848 523805788 1.240000e-13 89.8
18 TraesCS5A01G194300 chr5A 93.023 43 3 0 144 186 134361071 134361029 7.490000e-06 63.9
19 TraesCS5A01G194300 chr5D 95.330 3169 123 17 1161 4316 299937355 299940511 0.000000e+00 5009.0
20 TraesCS5A01G194300 chr5D 94.528 3143 126 14 5082 8199 299929029 299932150 0.000000e+00 4809.0
21 TraesCS5A01G194300 chr5D 94.225 3134 130 20 5082 8186 299941447 299944558 0.000000e+00 4737.0
22 TraesCS5A01G194300 chr5D 93.799 1516 76 14 2708 4215 299926511 299928016 0.000000e+00 2263.0
23 TraesCS5A01G194300 chr5D 96.669 1321 41 3 1426 2744 299925096 299926415 0.000000e+00 2193.0
24 TraesCS5A01G194300 chr5D 92.503 787 42 6 4311 5086 299940630 299941410 0.000000e+00 1110.0
25 TraesCS5A01G194300 chr5D 91.985 786 50 3 4311 5086 299928210 299928992 0.000000e+00 1090.0
26 TraesCS5A01G194300 chr5D 91.202 682 24 8 429 1085 299936469 299937139 0.000000e+00 894.0
27 TraesCS5A01G194300 chr5D 88.934 732 47 13 378 1085 299923757 299924478 0.000000e+00 872.0
28 TraesCS5A01G194300 chr5D 95.802 262 8 1 1166 1424 299924699 299924960 3.860000e-113 420.0
29 TraesCS5A01G194300 chr5D 95.333 150 7 0 8202 8351 300142077 300142226 1.160000e-58 239.0
30 TraesCS5A01G194300 chr5D 91.124 169 13 1 265 431 299936078 299936246 2.510000e-55 228.0
31 TraesCS5A01G194300 chr5D 94.186 86 5 0 4231 4316 299928003 299928088 2.020000e-26 132.0
32 TraesCS5A01G194300 chr5D 96.667 60 1 1 1115 1173 299924557 299924616 2.050000e-16 99.0
33 TraesCS5A01G194300 chr5D 96.970 33 0 1 250 281 241840672 241840704 5.000000e-03 54.7
34 TraesCS5A01G194300 chr5D 100.000 28 0 0 1085 1112 299937154 299937181 1.600000e-02 52.8
35 TraesCS5A01G194300 chr5B 94.669 3170 144 16 1161 4316 341558407 341561565 0.000000e+00 4894.0
36 TraesCS5A01G194300 chr5B 94.298 3139 135 17 5081 8199 341574360 341577474 0.000000e+00 4765.0
37 TraesCS5A01G194300 chr5B 93.609 3145 145 15 5082 8199 341529883 341532998 0.000000e+00 4643.0
38 TraesCS5A01G194300 chr5B 93.144 1517 84 16 2708 4215 341527363 341528868 0.000000e+00 2207.0
39 TraesCS5A01G194300 chr5B 95.170 1325 51 5 1427 2744 341525949 341527267 0.000000e+00 2080.0
40 TraesCS5A01G194300 chr5B 93.520 787 33 6 4311 5086 341573545 341574324 0.000000e+00 1155.0
41 TraesCS5A01G194300 chr5B 91.603 786 55 6 4311 5086 341529062 341529846 0.000000e+00 1075.0
42 TraesCS5A01G194300 chr5B 91.851 724 37 9 7366 8080 341578134 341578844 0.000000e+00 990.0
43 TraesCS5A01G194300 chr5B 88.283 734 49 15 378 1085 341524653 341525375 0.000000e+00 845.0
44 TraesCS5A01G194300 chr5B 91.823 587 19 3 524 1085 341555008 341555590 0.000000e+00 791.0
45 TraesCS5A01G194300 chr5B 89.718 603 38 8 8353 8938 387978991 387978396 0.000000e+00 749.0
46 TraesCS5A01G194300 chr5B 95.492 244 11 0 1181 1424 341525573 341525816 3.030000e-104 390.0
47 TraesCS5A01G194300 chr5B 84.791 263 23 12 182 431 341552028 341552286 1.930000e-61 248.0
48 TraesCS5A01G194300 chr5B 91.379 116 10 0 8071 8186 341585279 341585394 9.290000e-35 159.0
49 TraesCS5A01G194300 chr5B 93.023 86 6 0 4231 4316 341528855 341528940 9.420000e-25 126.0
50 TraesCS5A01G194300 chr5B 95.000 60 2 1 1115 1173 341525454 341525513 9.550000e-15 93.5
51 TraesCS5A01G194300 chr5B 100.000 28 0 0 1085 1112 341525390 341525417 1.600000e-02 52.8
52 TraesCS5A01G194300 chr3B 92.555 591 34 5 8353 8938 739867218 739866633 0.000000e+00 839.0
53 TraesCS5A01G194300 chr3B 90.441 136 12 1 1 135 448313176 448313311 2.560000e-40 178.0
54 TraesCS5A01G194300 chr3B 97.059 34 0 1 250 282 823586228 823586195 1.000000e-03 56.5
55 TraesCS5A01G194300 chr3B 100.000 28 0 0 252 279 689151283 689151310 1.600000e-02 52.8
56 TraesCS5A01G194300 chr2D 90.199 602 38 7 8351 8938 7464532 7463938 0.000000e+00 765.0
57 TraesCS5A01G194300 chr2D 89.062 64 6 1 133 195 451153808 451153871 2.680000e-10 78.7
58 TraesCS5A01G194300 chr6D 92.265 543 33 4 8400 8938 29228645 29228108 0.000000e+00 761.0
59 TraesCS5A01G194300 chr7D 91.529 543 37 4 8400 8938 61276260 61275723 0.000000e+00 739.0
60 TraesCS5A01G194300 chr7D 89.351 601 43 9 8353 8938 616568928 616569522 0.000000e+00 736.0
61 TraesCS5A01G194300 chr7B 90.625 544 35 10 8400 8938 685072970 685073502 0.000000e+00 708.0
62 TraesCS5A01G194300 chr4A 90.625 544 35 10 8400 8938 16197532 16197000 0.000000e+00 708.0
63 TraesCS5A01G194300 chr4A 86.207 203 26 2 632 833 595571797 595571596 1.510000e-52 219.0
64 TraesCS5A01G194300 chr4A 92.857 42 3 0 144 185 225310516 225310557 2.690000e-05 62.1
65 TraesCS5A01G194300 chr4A 100.000 29 0 0 251 279 581758030 581758058 5.000000e-03 54.7
66 TraesCS5A01G194300 chrUn 92.982 399 23 2 7646 8044 479504952 479505345 2.160000e-160 577.0
67 TraesCS5A01G194300 chr6A 93.617 141 7 2 1 139 196951509 196951369 9.090000e-50 209.0
68 TraesCS5A01G194300 chr6A 93.893 131 8 0 1 131 521465163 521465293 1.970000e-46 198.0
69 TraesCS5A01G194300 chr6A 93.443 61 3 1 133 192 196951483 196951423 1.240000e-13 89.8
70 TraesCS5A01G194300 chr6A 92.857 42 3 0 144 185 551533880 551533839 2.690000e-05 62.1
71 TraesCS5A01G194300 chr1B 73.492 547 138 7 6367 6908 677931173 677931717 5.470000e-47 200.0
72 TraesCS5A01G194300 chr1B 84.810 158 21 3 2369 2524 677926365 677926521 1.200000e-33 156.0
73 TraesCS5A01G194300 chr1A 91.791 134 10 1 1 133 304619230 304619363 1.530000e-42 185.0
74 TraesCS5A01G194300 chr1A 91.791 134 10 1 1 133 304798694 304798827 1.530000e-42 185.0
75 TraesCS5A01G194300 chr4D 77.259 343 58 16 2402 2732 7829231 7829565 5.510000e-42 183.0
76 TraesCS5A01G194300 chr4B 86.364 154 19 2 2033 2185 14123623 14123471 5.550000e-37 167.0
77 TraesCS5A01G194300 chr2A 87.218 133 16 1 4 135 365649356 365649224 5.590000e-32 150.0
78 TraesCS5A01G194300 chr2A 94.444 54 3 0 132 185 365649335 365649282 5.750000e-12 84.2
79 TraesCS5A01G194300 chr2A 92.857 42 3 0 144 185 643437110 643437069 2.690000e-05 62.1
80 TraesCS5A01G194300 chr2A 96.970 33 0 1 252 283 161264139 161264171 5.000000e-03 54.7
81 TraesCS5A01G194300 chr2A 100.000 28 0 0 252 279 46324714 46324687 1.600000e-02 52.8
82 TraesCS5A01G194300 chr1D 74.866 374 72 17 2369 2737 486829704 486830060 5.590000e-32 150.0
83 TraesCS5A01G194300 chr1D 96.875 32 0 1 252 282 270510578 270510609 1.600000e-02 52.8
84 TraesCS5A01G194300 chr3A 85.106 141 17 4 4 142 719999061 719998923 3.360000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G194300 chr5A 397753383 397762320 8937 False 16506.000000 16506 100.000000 1 8938 1 chr5A.!!$F3 8937
1 TraesCS5A01G194300 chr5A 397509280 397530249 20969 False 2087.272727 4872 92.806273 181 8199 11 chr5A.!!$F5 8018
2 TraesCS5A01G194300 chr5A 397561890 397562637 747 False 1055.000000 1055 92.380000 4311 5047 1 chr5A.!!$F2 736
3 TraesCS5A01G194300 chr5A 521754544 521755127 583 True 909.000000 909 94.746000 8353 8938 1 chr5A.!!$R2 585
4 TraesCS5A01G194300 chr5D 299923757 299944558 20801 False 1707.771429 5009 94.068143 265 8199 14 chr5D.!!$F3 7934
5 TraesCS5A01G194300 chr5B 341573545 341578844 5299 False 2303.333333 4765 93.223000 4311 8199 3 chr5B.!!$F4 3888
6 TraesCS5A01G194300 chr5B 341552028 341561565 9537 False 1977.666667 4894 90.427667 182 4316 3 chr5B.!!$F3 4134
7 TraesCS5A01G194300 chr5B 341524653 341532998 8345 False 1279.144444 4643 93.924889 378 8199 9 chr5B.!!$F2 7821
8 TraesCS5A01G194300 chr5B 387978396 387978991 595 True 749.000000 749 89.718000 8353 8938 1 chr5B.!!$R1 585
9 TraesCS5A01G194300 chr3B 739866633 739867218 585 True 839.000000 839 92.555000 8353 8938 1 chr3B.!!$R1 585
10 TraesCS5A01G194300 chr2D 7463938 7464532 594 True 765.000000 765 90.199000 8351 8938 1 chr2D.!!$R1 587
11 TraesCS5A01G194300 chr6D 29228108 29228645 537 True 761.000000 761 92.265000 8400 8938 1 chr6D.!!$R1 538
12 TraesCS5A01G194300 chr7D 61275723 61276260 537 True 739.000000 739 91.529000 8400 8938 1 chr7D.!!$R1 538
13 TraesCS5A01G194300 chr7D 616568928 616569522 594 False 736.000000 736 89.351000 8353 8938 1 chr7D.!!$F1 585
14 TraesCS5A01G194300 chr7B 685072970 685073502 532 False 708.000000 708 90.625000 8400 8938 1 chr7B.!!$F1 538
15 TraesCS5A01G194300 chr4A 16197000 16197532 532 True 708.000000 708 90.625000 8400 8938 1 chr4A.!!$R1 538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
253 254 0.250234 TCGCTGGCTATTGCTGTTCT 59.750 50.000 0.00 0.00 39.59 3.01 F
1027 18808 0.179250 CAACGGCATTCTCAACGACG 60.179 55.000 0.00 0.00 0.00 5.12 F
1116 18946 0.238289 GCGAACCTCAACACATGTGG 59.762 55.000 28.64 13.79 46.13 4.17 F
1353 21908 0.865769 GACGCAATTTGAGTCCGTGT 59.134 50.000 19.02 0.00 40.58 4.49 F
2432 23122 0.884704 AGGTTGCAGTTACTGTGGCG 60.885 55.000 14.23 0.00 33.43 5.69 F
2778 23606 1.810412 GCTCCGGTGGTTGGATATGTC 60.810 57.143 0.00 0.00 34.32 3.06 F
3538 24379 3.119459 TGCTTTTGTCAGCGGTGTTTTAA 60.119 39.130 15.22 4.89 43.37 1.52 F
3548 24389 4.455877 CAGCGGTGTTTTAAGGAGAGATTT 59.544 41.667 6.41 0.00 0.00 2.17 F
4850 25830 2.678336 GGTTGCCAAAAGATCTAGACCG 59.322 50.000 0.00 0.00 0.00 4.79 F
5828 26897 0.459585 GCATTGCAGGCATTGTGGAG 60.460 55.000 15.14 0.00 32.01 3.86 F
6292 27362 0.179936 TGTGGCCGATGCATGACATA 59.820 50.000 2.46 0.00 39.84 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1340 21895 1.006832 GCGCATACACGGACTCAAAT 58.993 50.000 0.30 0.00 0.00 2.32 R
3017 23854 0.108585 TGACTGAAGTTGCTCCCCAC 59.891 55.000 0.00 0.00 0.00 4.61 R
3056 23895 5.837437 AGTGAAAATGTTAATGCCACGAAA 58.163 33.333 0.00 0.00 0.00 3.46 R
3293 24132 4.298103 AGGTAAGAAGAGTGAGTCGGTA 57.702 45.455 0.00 0.00 0.00 4.02 R
3451 24290 2.439409 CAATGGACAAGCATGGAGTCA 58.561 47.619 0.00 0.00 34.04 3.41 R
4487 25465 0.313987 TGATACCGCTCAGGCATACG 59.686 55.000 0.00 0.00 46.52 3.06 R
4850 25830 1.065551 ACTGAAACTGCAGAAAACCGC 59.934 47.619 23.35 2.78 39.20 5.68 R
4852 25832 5.831997 ACATAACTGAAACTGCAGAAAACC 58.168 37.500 23.35 5.12 39.20 3.27 R
5840 26909 1.032114 GCTGGCGGGCAATAGAAAGT 61.032 55.000 5.54 0.00 0.00 2.66 R
7445 28527 0.921896 ATAGATGGTTGGGTGCTGCT 59.078 50.000 0.00 0.00 0.00 4.24 R
8289 30869 0.035152 CACTGACCCTGCAGCCATAA 60.035 55.000 8.66 0.00 39.51 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 9.778741 AATATATGAAGTGGCGATTCTAAAAGA 57.221 29.630 0.00 0.00 0.00 2.52
84 85 9.778741 ATATATGAAGTGGCGATTCTAAAAGAA 57.221 29.630 0.00 0.00 38.78 2.52
85 86 5.862924 TGAAGTGGCGATTCTAAAAGAAG 57.137 39.130 0.00 0.00 37.69 2.85
86 87 4.154195 TGAAGTGGCGATTCTAAAAGAAGC 59.846 41.667 0.00 0.00 37.69 3.86
89 90 5.112686 AGTGGCGATTCTAAAAGAAGCTAG 58.887 41.667 3.72 0.00 38.40 3.42
90 91 4.271291 GTGGCGATTCTAAAAGAAGCTAGG 59.729 45.833 3.72 0.00 38.40 3.02
91 92 4.161565 TGGCGATTCTAAAAGAAGCTAGGA 59.838 41.667 3.72 0.00 38.40 2.94
93 94 5.235401 GGCGATTCTAAAAGAAGCTAGGAAG 59.765 44.000 3.72 0.00 38.40 3.46
94 95 5.235401 GCGATTCTAAAAGAAGCTAGGAAGG 59.765 44.000 3.72 0.00 38.40 3.46
95 96 5.755861 CGATTCTAAAAGAAGCTAGGAAGGG 59.244 44.000 3.72 0.00 38.40 3.95
96 97 5.437191 TTCTAAAAGAAGCTAGGAAGGGG 57.563 43.478 0.00 0.00 29.50 4.79
97 98 3.780850 TCTAAAAGAAGCTAGGAAGGGGG 59.219 47.826 0.00 0.00 0.00 5.40
98 99 0.626382 AAAGAAGCTAGGAAGGGGGC 59.374 55.000 0.00 0.00 0.00 5.80
99 100 0.550147 AAGAAGCTAGGAAGGGGGCA 60.550 55.000 0.00 0.00 0.00 5.36
100 101 0.550147 AGAAGCTAGGAAGGGGGCAA 60.550 55.000 0.00 0.00 0.00 4.52
101 102 0.553333 GAAGCTAGGAAGGGGGCAAT 59.447 55.000 0.00 0.00 0.00 3.56
102 103 1.010795 AAGCTAGGAAGGGGGCAATT 58.989 50.000 0.00 0.00 0.00 2.32
103 104 0.553333 AGCTAGGAAGGGGGCAATTC 59.447 55.000 0.00 0.00 0.00 2.17
104 105 0.553333 GCTAGGAAGGGGGCAATTCT 59.447 55.000 0.00 0.00 0.00 2.40
105 106 1.752084 GCTAGGAAGGGGGCAATTCTG 60.752 57.143 0.00 0.00 0.00 3.02
106 107 0.926293 TAGGAAGGGGGCAATTCTGG 59.074 55.000 0.00 0.00 0.00 3.86
121 122 2.577606 TCTGGAAGAATCGCCCAAAA 57.422 45.000 0.00 0.00 42.31 2.44
122 123 2.436417 TCTGGAAGAATCGCCCAAAAG 58.564 47.619 0.00 0.00 42.31 2.27
124 125 2.819608 CTGGAAGAATCGCCCAAAAGAA 59.180 45.455 0.00 0.00 34.07 2.52
125 126 2.556622 TGGAAGAATCGCCCAAAAGAAC 59.443 45.455 0.00 0.00 0.00 3.01
127 128 3.366374 GGAAGAATCGCCCAAAAGAACTG 60.366 47.826 0.00 0.00 0.00 3.16
128 129 2.162681 AGAATCGCCCAAAAGAACTGG 58.837 47.619 0.00 0.00 0.00 4.00
129 130 0.603065 AATCGCCCAAAAGAACTGGC 59.397 50.000 0.00 0.00 40.54 4.85
130 131 1.250840 ATCGCCCAAAAGAACTGGCC 61.251 55.000 0.00 0.00 40.87 5.36
131 132 2.931068 CGCCCAAAAGAACTGGCCC 61.931 63.158 0.00 0.00 40.87 5.80
132 133 1.533994 GCCCAAAAGAACTGGCCCT 60.534 57.895 0.00 0.00 37.94 5.19
133 134 0.251608 GCCCAAAAGAACTGGCCCTA 60.252 55.000 0.00 0.00 37.94 3.53
134 135 1.825641 GCCCAAAAGAACTGGCCCTAA 60.826 52.381 0.00 0.00 37.94 2.69
137 138 4.349365 CCCAAAAGAACTGGCCCTAATTA 58.651 43.478 0.00 0.00 32.10 1.40
138 139 4.402474 CCCAAAAGAACTGGCCCTAATTAG 59.598 45.833 0.00 5.43 32.10 1.73
139 140 5.261216 CCAAAAGAACTGGCCCTAATTAGA 58.739 41.667 14.28 0.00 0.00 2.10
140 141 5.125578 CCAAAAGAACTGGCCCTAATTAGAC 59.874 44.000 14.28 5.58 0.00 2.59
144 145 5.286221 AGAACTGGCCCTAATTAGACCTTA 58.714 41.667 14.28 0.26 0.00 2.69
145 146 5.729718 AGAACTGGCCCTAATTAGACCTTAA 59.270 40.000 14.28 0.00 0.00 1.85
146 147 6.390165 AGAACTGGCCCTAATTAGACCTTAAT 59.610 38.462 14.28 3.95 0.00 1.40
148 149 7.701257 ACTGGCCCTAATTAGACCTTAATTA 57.299 36.000 14.28 0.00 0.00 1.40
149 150 8.109560 ACTGGCCCTAATTAGACCTTAATTAA 57.890 34.615 14.28 0.00 31.42 1.40
150 151 8.562635 ACTGGCCCTAATTAGACCTTAATTAAA 58.437 33.333 14.28 0.00 31.42 1.52
151 152 9.588096 CTGGCCCTAATTAGACCTTAATTAAAT 57.412 33.333 14.28 0.00 31.42 1.40
209 210 4.612932 AAAGTTGTTACGCGGTTTACAA 57.387 36.364 12.47 11.95 0.00 2.41
210 211 4.612932 AAGTTGTTACGCGGTTTACAAA 57.387 36.364 12.47 0.00 32.84 2.83
211 212 4.816786 AGTTGTTACGCGGTTTACAAAT 57.183 36.364 12.47 11.17 32.84 2.32
212 213 4.529446 AGTTGTTACGCGGTTTACAAATG 58.471 39.130 12.47 0.00 32.84 2.32
213 214 4.035441 AGTTGTTACGCGGTTTACAAATGT 59.965 37.500 12.47 1.25 32.84 2.71
214 215 4.131202 TGTTACGCGGTTTACAAATGTC 57.869 40.909 12.47 0.00 0.00 3.06
215 216 3.558829 TGTTACGCGGTTTACAAATGTCA 59.441 39.130 12.47 0.00 0.00 3.58
217 218 1.264826 ACGCGGTTTACAAATGTCACC 59.735 47.619 12.47 5.22 0.00 4.02
219 220 1.068125 GCGGTTTACAAATGTCACCCC 60.068 52.381 8.52 0.00 31.18 4.95
220 221 1.542472 CGGTTTACAAATGTCACCCCC 59.458 52.381 8.52 0.00 31.18 5.40
221 222 2.816337 CGGTTTACAAATGTCACCCCCT 60.816 50.000 8.52 0.00 31.18 4.79
222 223 2.823747 GGTTTACAAATGTCACCCCCTC 59.176 50.000 4.24 0.00 0.00 4.30
224 225 0.996583 TACAAATGTCACCCCCTCCC 59.003 55.000 0.00 0.00 0.00 4.30
225 226 1.071314 ACAAATGTCACCCCCTCCCA 61.071 55.000 0.00 0.00 0.00 4.37
226 227 0.323725 CAAATGTCACCCCCTCCCAG 60.324 60.000 0.00 0.00 0.00 4.45
227 228 0.776080 AAATGTCACCCCCTCCCAGT 60.776 55.000 0.00 0.00 0.00 4.00
229 230 2.203938 GTCACCCCCTCCCAGTGA 60.204 66.667 0.00 0.00 38.17 3.41
230 231 1.846124 GTCACCCCCTCCCAGTGAA 60.846 63.158 0.00 0.00 41.87 3.18
231 232 1.163309 TCACCCCCTCCCAGTGAAT 59.837 57.895 0.00 0.00 37.58 2.57
232 233 1.207488 TCACCCCCTCCCAGTGAATG 61.207 60.000 0.00 0.00 37.58 2.67
233 234 1.151587 ACCCCCTCCCAGTGAATGT 60.152 57.895 0.00 0.00 0.00 2.71
236 237 0.392998 CCCCTCCCAGTGAATGTTCG 60.393 60.000 0.00 0.00 0.00 3.95
244 245 2.698855 AGTGAATGTTCGCTGGCTAT 57.301 45.000 7.94 0.00 45.56 2.97
245 246 2.991250 AGTGAATGTTCGCTGGCTATT 58.009 42.857 7.94 0.00 45.56 1.73
246 247 2.679837 AGTGAATGTTCGCTGGCTATTG 59.320 45.455 7.94 0.00 45.56 1.90
247 248 1.401552 TGAATGTTCGCTGGCTATTGC 59.598 47.619 0.00 0.00 38.76 3.56
248 249 1.672881 GAATGTTCGCTGGCTATTGCT 59.327 47.619 0.00 0.00 39.59 3.91
250 251 0.321564 TGTTCGCTGGCTATTGCTGT 60.322 50.000 0.00 0.00 39.59 4.40
251 252 0.804989 GTTCGCTGGCTATTGCTGTT 59.195 50.000 0.00 0.00 39.59 3.16
253 254 0.250234 TCGCTGGCTATTGCTGTTCT 59.750 50.000 0.00 0.00 39.59 3.01
254 255 1.089920 CGCTGGCTATTGCTGTTCTT 58.910 50.000 0.00 0.00 39.59 2.52
255 256 1.470098 CGCTGGCTATTGCTGTTCTTT 59.530 47.619 0.00 0.00 39.59 2.52
256 257 2.095059 CGCTGGCTATTGCTGTTCTTTT 60.095 45.455 0.00 0.00 39.59 2.27
257 258 3.126858 CGCTGGCTATTGCTGTTCTTTTA 59.873 43.478 0.00 0.00 39.59 1.52
258 259 4.201950 CGCTGGCTATTGCTGTTCTTTTAT 60.202 41.667 0.00 0.00 39.59 1.40
259 260 5.007626 CGCTGGCTATTGCTGTTCTTTTATA 59.992 40.000 0.00 0.00 39.59 0.98
260 261 6.293626 CGCTGGCTATTGCTGTTCTTTTATAT 60.294 38.462 0.00 0.00 39.59 0.86
261 262 7.428826 GCTGGCTATTGCTGTTCTTTTATATT 58.571 34.615 0.00 0.00 39.59 1.28
263 264 7.715657 TGGCTATTGCTGTTCTTTTATATTGG 58.284 34.615 0.00 0.00 39.59 3.16
264 265 7.341769 TGGCTATTGCTGTTCTTTTATATTGGT 59.658 33.333 0.00 0.00 39.59 3.67
265 266 8.846211 GGCTATTGCTGTTCTTTTATATTGGTA 58.154 33.333 0.00 0.00 39.59 3.25
398 15486 8.863049 GCAAAATTTGGATGTATAAAGTGAGTG 58.137 33.333 7.89 0.00 0.00 3.51
417 15505 5.125900 TGAGTGCGCTATTTTAGTGGTACTA 59.874 40.000 9.73 0.00 36.81 1.82
458 17931 7.254084 CCATTTTCGATAAGTGCCTTAAAATGC 60.254 37.037 17.44 0.00 36.00 3.56
564 18300 0.450482 CTCGCGCTAAACAACAACGG 60.450 55.000 5.56 0.00 0.00 4.44
565 18301 1.439693 CGCGCTAAACAACAACGGG 60.440 57.895 5.56 0.00 0.00 5.28
566 18302 1.728074 GCGCTAAACAACAACGGGC 60.728 57.895 0.00 0.00 0.00 6.13
567 18303 1.081708 CGCTAAACAACAACGGGCC 60.082 57.895 0.00 0.00 0.00 5.80
600 18340 2.398554 GCAGGGCGCGAATCTCAAA 61.399 57.895 12.10 0.00 0.00 2.69
975 18756 2.985847 GGGTTCGCCAAGCAGCTT 60.986 61.111 0.21 0.21 39.65 3.74
1027 18808 0.179250 CAACGGCATTCTCAACGACG 60.179 55.000 0.00 0.00 0.00 5.12
1038 18819 2.109425 TCAACGACGAGATGAGAGGA 57.891 50.000 0.00 0.00 0.00 3.71
1112 18908 2.289631 TGATCAGCGAACCTCAACACAT 60.290 45.455 0.00 0.00 0.00 3.21
1113 18909 1.511850 TCAGCGAACCTCAACACATG 58.488 50.000 0.00 0.00 0.00 3.21
1116 18946 0.238289 GCGAACCTCAACACATGTGG 59.762 55.000 28.64 13.79 46.13 4.17
1318 21873 5.369409 AAGTACCAGTATAAGGGGAAAGC 57.631 43.478 0.00 0.00 0.00 3.51
1353 21908 0.865769 GACGCAATTTGAGTCCGTGT 59.134 50.000 19.02 0.00 40.58 4.49
1408 21963 4.218417 GCCCGCATTCAAGGTGATTATATT 59.782 41.667 0.00 0.00 0.00 1.28
1445 22130 8.738645 AGGATGACTTTATGTTCCTCAAATAC 57.261 34.615 0.00 0.00 32.00 1.89
1504 22189 6.781138 TCATAACATATCTTGTTTTGCCGTC 58.219 36.000 0.00 0.00 46.51 4.79
1616 22301 2.746472 GCTGGTCCTCTCAAAACTGTGT 60.746 50.000 0.00 0.00 0.00 3.72
1803 22491 8.948631 TGTTTGTTTAATTTTATTCAGGCACA 57.051 26.923 0.00 0.00 0.00 4.57
1875 22563 4.561530 GCACTAGATGTTGGAGTGAAGTCA 60.562 45.833 5.47 0.00 42.65 3.41
1977 22665 7.744087 TGTTAATGAAATACTGTGTCAAGCT 57.256 32.000 0.00 0.00 0.00 3.74
2146 22834 3.325716 TCACTTACCGGGAAGTAGCTTTT 59.674 43.478 31.58 4.49 37.57 2.27
2282 22970 9.542462 ACTGTGCGATGTTACTATACATAAATT 57.458 29.630 0.00 0.00 38.80 1.82
2421 23111 7.706159 TCAGCATGTATTTTATTAGGTTGCAG 58.294 34.615 0.00 0.00 37.40 4.41
2432 23122 0.884704 AGGTTGCAGTTACTGTGGCG 60.885 55.000 14.23 0.00 33.43 5.69
2501 23191 3.314357 GGTGGACTCACTTGTGGTTAAAC 59.686 47.826 0.64 0.00 43.17 2.01
2534 23224 3.490761 CCACATGGGTAAATCAATTCGGC 60.491 47.826 0.00 0.00 0.00 5.54
2634 23331 5.852827 AGCCATCTAGCTGTAGATTCTTTC 58.147 41.667 0.00 0.00 42.48 2.62
2673 23370 5.152623 TCTGGACACAGTTTCTTGATAGG 57.847 43.478 0.00 0.00 45.14 2.57
2778 23606 1.810412 GCTCCGGTGGTTGGATATGTC 60.810 57.143 0.00 0.00 34.32 3.06
2888 23725 6.701145 TGACAATGGCAAGTTTAAGTAACA 57.299 33.333 0.00 0.00 39.30 2.41
2890 23727 6.975772 TGACAATGGCAAGTTTAAGTAACAAC 59.024 34.615 0.00 0.00 39.30 3.32
2896 23733 4.436523 GCAAGTTTAAGTAACAACAGTGCG 59.563 41.667 0.00 0.00 39.30 5.34
3017 23854 3.930336 TCTGACAAGTGGCATCTTACTG 58.070 45.455 0.00 0.03 29.25 2.74
3048 23887 5.466819 CAACTTCAGTCAATGCATCAACAT 58.533 37.500 0.00 0.00 0.00 2.71
3056 23895 7.501225 TCAGTCAATGCATCAACATAGATTCAT 59.499 33.333 0.00 0.00 34.14 2.57
3293 24132 7.256012 CCTCTACCTGAACTCTAGAAACTTGTT 60.256 40.741 0.00 0.00 0.00 2.83
3311 24150 5.533903 ACTTGTTACCGACTCACTCTTCTTA 59.466 40.000 0.00 0.00 0.00 2.10
3336 24175 5.707298 CCTAGACTTGGCATTCTTTTTCTCA 59.293 40.000 4.62 0.00 0.00 3.27
3438 24277 4.706842 TTTCCCCACTATTCCATCTAGC 57.293 45.455 0.00 0.00 0.00 3.42
3449 24288 3.795623 TCCATCTAGCGGAAACACTAC 57.204 47.619 0.00 0.00 0.00 2.73
3451 24290 3.704566 TCCATCTAGCGGAAACACTACAT 59.295 43.478 0.00 0.00 0.00 2.29
3480 24320 6.097981 TCCATGCTTGTCCATTGCATAAAATA 59.902 34.615 0.00 0.00 44.39 1.40
3538 24379 3.119459 TGCTTTTGTCAGCGGTGTTTTAA 60.119 39.130 15.22 4.89 43.37 1.52
3548 24389 4.455877 CAGCGGTGTTTTAAGGAGAGATTT 59.544 41.667 6.41 0.00 0.00 2.17
3596 24437 5.809051 GGAGCAAAATGACCATTTCTTCATC 59.191 40.000 8.26 4.01 39.88 2.92
3668 24509 4.869861 TGTACTTCACCGATCACATGATTG 59.130 41.667 0.00 2.49 34.37 2.67
3698 24539 9.846248 GTGGATGGTTTGATAAATTAGCATATC 57.154 33.333 0.00 0.00 0.00 1.63
3730 24572 4.584327 TGTCGATATAGGTGTGATGGTG 57.416 45.455 0.00 0.00 0.00 4.17
3753 24595 8.499162 GGTGATCTTATGTATTGTTGTAGCATC 58.501 37.037 0.00 0.00 0.00 3.91
3869 24712 6.697395 TCTATCAAACTGCACACTAGCTTAA 58.303 36.000 0.00 0.00 34.99 1.85
3872 24715 6.721571 TCAAACTGCACACTAGCTTAATAC 57.278 37.500 0.00 0.00 34.99 1.89
3883 24726 8.918658 CACACTAGCTTAATACGTTAAAAGTCA 58.081 33.333 0.00 0.00 29.86 3.41
4487 25465 8.584157 CCCTAGTATCTGATCATATATTCTGGC 58.416 40.741 0.00 0.00 0.00 4.85
4493 25472 6.276091 TCTGATCATATATTCTGGCGTATGC 58.724 40.000 0.00 0.00 41.71 3.14
4528 25507 8.853077 ATCAAGAACAACTTACATGAATCTCA 57.147 30.769 0.00 0.00 37.03 3.27
4600 25579 5.070580 GTGCTCTATCTTACCACATTAGGGT 59.929 44.000 0.00 0.00 42.48 4.34
4835 25815 9.768662 ATTATTGATTTAAATCAGATGGTTGCC 57.231 29.630 25.58 0.51 45.35 4.52
4850 25830 2.678336 GGTTGCCAAAAGATCTAGACCG 59.322 50.000 0.00 0.00 0.00 4.79
4852 25832 0.931005 GCCAAAAGATCTAGACCGCG 59.069 55.000 0.00 0.00 0.00 6.46
4878 25858 7.750903 GGTTTTCTGCAGTTTCAGTTATGTATC 59.249 37.037 14.67 0.00 35.63 2.24
4880 25860 5.720202 TCTGCAGTTTCAGTTATGTATCGT 58.280 37.500 14.67 0.00 35.63 3.73
4934 25924 5.045872 GGAGCAATGAATTTTATGACAGCC 58.954 41.667 0.00 0.00 0.00 4.85
5041 26032 7.377766 TCATGAAGTATGGTTTTTCTGTAGC 57.622 36.000 0.00 0.00 37.39 3.58
5208 26240 5.661056 TGGTATTAGGTCAGACTGACTTG 57.339 43.478 29.70 0.00 46.19 3.16
5226 26258 9.515226 ACTGACTTGCTTTCCTTAAATATGTTA 57.485 29.630 0.00 0.00 0.00 2.41
5554 26620 8.673711 GGTGCATATGATACACAGAAAAAGTTA 58.326 33.333 6.97 0.00 36.00 2.24
5628 26697 3.490249 CGAAAGAAGGGCGGAAACTTTTT 60.490 43.478 0.00 0.00 32.20 1.94
5668 26737 9.444600 GTAAATGGAACTGGATTTTACAGAGTA 57.555 33.333 0.00 0.00 39.24 2.59
5713 26782 2.159184 TGCACTTCAAAATGCGTTGGAA 60.159 40.909 0.00 0.00 45.13 3.53
5828 26897 0.459585 GCATTGCAGGCATTGTGGAG 60.460 55.000 15.14 0.00 32.01 3.86
5840 26909 4.136796 GCATTGTGGAGGACTTATATGCA 58.863 43.478 0.00 0.00 37.62 3.96
6291 27361 0.680601 TTGTGGCCGATGCATGACAT 60.681 50.000 2.46 0.00 43.54 3.06
6292 27362 0.179936 TGTGGCCGATGCATGACATA 59.820 50.000 2.46 0.00 39.84 2.29
6361 27431 8.990163 ACAGGTTCCTATGTTTCTTCTTTTTA 57.010 30.769 0.00 0.00 0.00 1.52
6503 27573 6.893020 AGACCATTAATGAAGGAGTTAGGT 57.107 37.500 17.23 1.78 0.00 3.08
6530 27600 1.336795 ACATCTTCACACGTGATCGCA 60.337 47.619 25.01 2.96 39.64 5.10
6590 27660 4.134563 ACCTTTTGCTATCACTTCACGTT 58.865 39.130 0.00 0.00 0.00 3.99
6620 27690 8.737168 TCCTATGATTACTTCTTCCATTTGTG 57.263 34.615 0.00 0.00 0.00 3.33
6731 27801 1.722034 ACAAGGAGTCAGCTGAAGGA 58.278 50.000 20.19 0.00 0.00 3.36
6764 27834 3.240302 ACAAGTCTTAGGTGTGTAGCCT 58.760 45.455 0.00 0.00 40.00 4.58
6952 28027 6.570692 TCTTCCACAATTATAGTCGAAGGTC 58.429 40.000 0.00 0.00 35.69 3.85
6956 28031 5.980116 CCACAATTATAGTCGAAGGTCTCTG 59.020 44.000 0.00 0.00 0.00 3.35
6974 28049 2.138320 CTGTGAGCTACCTTGTGTGTG 58.862 52.381 0.00 0.00 0.00 3.82
6975 28050 1.484653 TGTGAGCTACCTTGTGTGTGT 59.515 47.619 0.00 0.00 0.00 3.72
6976 28051 2.135933 GTGAGCTACCTTGTGTGTGTC 58.864 52.381 0.00 0.00 0.00 3.67
7117 28196 6.183360 GGTTGAAGGTACGATCTCTTTTAACG 60.183 42.308 0.00 0.00 0.00 3.18
7136 28215 4.674281 ACGATGAGGACCCTTTTATCTC 57.326 45.455 0.00 0.00 0.00 2.75
7148 28227 5.063204 CCCTTTTATCTCTGTGTGTTGACA 58.937 41.667 0.00 0.00 0.00 3.58
7299 28381 2.642311 TGCATTACAAAGAGGACCCAGA 59.358 45.455 0.00 0.00 0.00 3.86
7445 28527 8.635765 ATTTTAAGTAGAGTGAATTTGAGGCA 57.364 30.769 0.00 0.00 0.00 4.75
7571 30142 3.998341 GTGCTAACATTTGTCCCGTTCTA 59.002 43.478 0.00 0.00 0.00 2.10
7620 30191 4.301072 TCTCAAAGACATTTTCCGGGAT 57.699 40.909 0.00 0.00 0.00 3.85
7623 30194 4.261801 TCAAAGACATTTTCCGGGATCTC 58.738 43.478 0.00 0.00 0.00 2.75
7648 30219 6.144080 CGGTGGCGAATTTTGTTAAAAACATA 59.856 34.615 0.00 0.00 41.79 2.29
7735 30306 5.387113 TGCAGGTATTATTTCCATGAGGT 57.613 39.130 0.00 0.00 35.89 3.85
7749 30320 4.901250 TCCATGAGGTCATAGCTAATGTGA 59.099 41.667 0.00 0.00 33.64 3.58
7805 30376 1.522580 GGCGGCAGAGATCTCCAAC 60.523 63.158 19.30 8.74 0.00 3.77
7817 30388 3.823304 AGATCTCCAACTTCTTTGCAACC 59.177 43.478 0.00 0.00 33.34 3.77
7831 30402 4.572571 AACCCGCACAAAGCCCGA 62.573 61.111 0.00 0.00 41.38 5.14
7844 30415 0.970937 AGCCCGAATTCGAGAGGACA 60.971 55.000 28.76 0.00 43.02 4.02
7855 30426 1.270826 CGAGAGGACACTGAAGCAGAA 59.729 52.381 0.82 0.00 35.18 3.02
7889 30460 1.144716 GATCAGTGCGAGATGGGCA 59.855 57.895 0.00 0.00 38.25 5.36
7904 30475 2.203181 GCAGAGGGCATCAGGAGC 60.203 66.667 0.58 0.00 43.97 4.70
7965 30536 1.893808 CAAGCCCTGACGTGTTGCT 60.894 57.895 0.00 0.00 0.00 3.91
7984 30555 2.223852 GCTGCTAGAGTGCTAGGTTACC 60.224 54.545 0.00 0.00 43.54 2.85
7985 30556 3.024547 CTGCTAGAGTGCTAGGTTACCA 58.975 50.000 3.51 0.00 43.54 3.25
7990 30561 5.068723 GCTAGAGTGCTAGGTTACCATTGTA 59.931 44.000 3.51 0.00 43.54 2.41
8019 30590 5.811613 GCAATAAGAATGCATTTGTGCCTTA 59.188 36.000 14.33 15.23 43.29 2.69
8020 30591 6.237915 GCAATAAGAATGCATTTGTGCCTTAC 60.238 38.462 14.33 0.00 43.29 2.34
8048 30628 2.106338 TGGAAACTGTGGCTTGAGATGA 59.894 45.455 0.00 0.00 0.00 2.92
8121 30701 7.546358 CCAGTTTGTAGCCAAATCATTGATTA 58.454 34.615 12.15 0.00 42.26 1.75
8122 30702 7.703621 CCAGTTTGTAGCCAAATCATTGATTAG 59.296 37.037 12.15 8.31 42.26 1.73
8169 30749 6.947733 TGGGTTGTATGAAGAATGAGAATGTT 59.052 34.615 0.00 0.00 0.00 2.71
8174 30754 9.958180 TTGTATGAAGAATGAGAATGTTAAGGA 57.042 29.630 0.00 0.00 0.00 3.36
8186 30766 8.750298 TGAGAATGTTAAGGAGAAACTAGGTAG 58.250 37.037 0.00 0.00 0.00 3.18
8187 30767 7.557724 AGAATGTTAAGGAGAAACTAGGTAGC 58.442 38.462 0.00 0.00 0.00 3.58
8188 30768 6.869206 ATGTTAAGGAGAAACTAGGTAGCA 57.131 37.500 0.00 0.00 0.00 3.49
8189 30769 6.869206 TGTTAAGGAGAAACTAGGTAGCAT 57.131 37.500 0.00 0.00 0.00 3.79
8190 30770 7.966339 TGTTAAGGAGAAACTAGGTAGCATA 57.034 36.000 0.00 0.00 0.00 3.14
8191 30771 8.548880 TGTTAAGGAGAAACTAGGTAGCATAT 57.451 34.615 0.00 0.00 0.00 1.78
8192 30772 8.639761 TGTTAAGGAGAAACTAGGTAGCATATC 58.360 37.037 0.00 0.00 0.00 1.63
8193 30773 6.673839 AAGGAGAAACTAGGTAGCATATCC 57.326 41.667 0.00 0.00 0.00 2.59
8194 30774 5.716979 AGGAGAAACTAGGTAGCATATCCA 58.283 41.667 0.00 0.00 29.81 3.41
8195 30775 6.326970 AGGAGAAACTAGGTAGCATATCCAT 58.673 40.000 0.00 0.00 29.81 3.41
8196 30776 6.789959 AGGAGAAACTAGGTAGCATATCCATT 59.210 38.462 0.00 0.00 29.81 3.16
8197 30777 7.956315 AGGAGAAACTAGGTAGCATATCCATTA 59.044 37.037 0.00 0.00 29.81 1.90
8198 30778 8.594550 GGAGAAACTAGGTAGCATATCCATTAA 58.405 37.037 0.00 0.00 0.00 1.40
8200 30780 9.950496 AGAAACTAGGTAGCATATCCATTAATG 57.050 33.333 8.58 8.58 0.00 1.90
8201 30781 9.944376 GAAACTAGGTAGCATATCCATTAATGA 57.056 33.333 17.23 3.72 0.00 2.57
8203 30783 9.950496 AACTAGGTAGCATATCCATTAATGAAG 57.050 33.333 17.23 1.19 0.00 3.02
8204 30784 9.326489 ACTAGGTAGCATATCCATTAATGAAGA 57.674 33.333 17.23 6.93 0.00 2.87
8217 30797 9.081204 TCCATTAATGAAGATTTATGTGGATGG 57.919 33.333 17.23 0.00 29.99 3.51
8218 30798 8.863086 CCATTAATGAAGATTTATGTGGATGGT 58.137 33.333 17.23 0.00 29.99 3.55
8219 30799 9.687210 CATTAATGAAGATTTATGTGGATGGTG 57.313 33.333 10.04 0.00 0.00 4.17
8220 30800 5.779529 ATGAAGATTTATGTGGATGGTGC 57.220 39.130 0.00 0.00 0.00 5.01
8221 30801 4.598022 TGAAGATTTATGTGGATGGTGCA 58.402 39.130 0.00 0.00 0.00 4.57
8222 30802 5.202765 TGAAGATTTATGTGGATGGTGCAT 58.797 37.500 0.00 0.00 0.00 3.96
8223 30803 5.657745 TGAAGATTTATGTGGATGGTGCATT 59.342 36.000 0.00 0.00 0.00 3.56
8224 30804 6.154877 TGAAGATTTATGTGGATGGTGCATTT 59.845 34.615 0.00 0.00 0.00 2.32
8225 30805 6.152932 AGATTTATGTGGATGGTGCATTTC 57.847 37.500 0.00 0.00 0.00 2.17
8226 30806 5.657745 AGATTTATGTGGATGGTGCATTTCA 59.342 36.000 0.00 0.00 0.00 2.69
8227 30807 5.936187 TTTATGTGGATGGTGCATTTCAT 57.064 34.783 0.00 0.00 0.00 2.57
8228 30808 3.812156 ATGTGGATGGTGCATTTCATG 57.188 42.857 0.00 0.00 0.00 3.07
8229 30809 2.805194 TGTGGATGGTGCATTTCATGA 58.195 42.857 0.00 0.00 0.00 3.07
8230 30810 3.367321 TGTGGATGGTGCATTTCATGAT 58.633 40.909 0.00 0.00 0.00 2.45
8231 30811 3.131400 TGTGGATGGTGCATTTCATGATG 59.869 43.478 0.00 0.00 0.00 3.07
8232 30812 3.382227 GTGGATGGTGCATTTCATGATGA 59.618 43.478 0.00 0.00 0.00 2.92
8233 30813 4.024670 TGGATGGTGCATTTCATGATGAA 58.975 39.130 3.29 3.29 34.03 2.57
8234 30814 4.651962 TGGATGGTGCATTTCATGATGAAT 59.348 37.500 8.90 0.00 36.11 2.57
8235 30815 5.221362 TGGATGGTGCATTTCATGATGAATC 60.221 40.000 8.90 0.94 36.11 2.52
8236 30816 5.010719 GGATGGTGCATTTCATGATGAATCT 59.989 40.000 8.90 0.00 36.11 2.40
8237 30817 6.208007 GGATGGTGCATTTCATGATGAATCTA 59.792 38.462 8.90 0.00 36.11 1.98
8238 30818 6.628919 TGGTGCATTTCATGATGAATCTAG 57.371 37.500 8.90 1.13 36.11 2.43
8239 30819 6.358991 TGGTGCATTTCATGATGAATCTAGA 58.641 36.000 8.90 0.00 36.11 2.43
8240 30820 6.261603 TGGTGCATTTCATGATGAATCTAGAC 59.738 38.462 8.90 3.10 36.11 2.59
8241 30821 6.261603 GGTGCATTTCATGATGAATCTAGACA 59.738 38.462 8.90 0.01 36.11 3.41
8242 30822 7.040617 GGTGCATTTCATGATGAATCTAGACAT 60.041 37.037 8.90 0.00 36.11 3.06
8243 30823 7.803659 GTGCATTTCATGATGAATCTAGACATG 59.196 37.037 8.90 8.72 36.11 3.21
8244 30824 7.040686 TGCATTTCATGATGAATCTAGACATGG 60.041 37.037 8.90 5.62 36.11 3.66
8245 30825 7.040617 GCATTTCATGATGAATCTAGACATGGT 60.041 37.037 8.90 4.98 36.11 3.55
8246 30826 7.797038 TTTCATGATGAATCTAGACATGGTG 57.203 36.000 8.90 8.42 36.11 4.17
8247 30827 5.861727 TCATGATGAATCTAGACATGGTGG 58.138 41.667 16.17 0.00 38.82 4.61
8248 30828 4.077300 TGATGAATCTAGACATGGTGGC 57.923 45.455 0.00 0.00 0.00 5.01
8249 30829 3.713248 TGATGAATCTAGACATGGTGGCT 59.287 43.478 0.00 0.00 40.22 4.75
8250 30830 3.548745 TGAATCTAGACATGGTGGCTG 57.451 47.619 0.00 0.00 35.73 4.85
8251 30831 2.171237 TGAATCTAGACATGGTGGCTGG 59.829 50.000 0.00 0.00 35.73 4.85
8252 30832 1.135094 ATCTAGACATGGTGGCTGGG 58.865 55.000 0.00 0.00 35.73 4.45
8253 30833 0.982852 TCTAGACATGGTGGCTGGGG 60.983 60.000 0.00 0.00 35.73 4.96
8254 30834 1.229820 TAGACATGGTGGCTGGGGT 60.230 57.895 0.00 0.00 35.73 4.95
8255 30835 1.561769 TAGACATGGTGGCTGGGGTG 61.562 60.000 0.00 0.00 35.73 4.61
8256 30836 3.185203 ACATGGTGGCTGGGGTGT 61.185 61.111 0.00 0.00 0.00 4.16
8257 30837 2.677524 CATGGTGGCTGGGGTGTG 60.678 66.667 0.00 0.00 0.00 3.82
8258 30838 2.858476 ATGGTGGCTGGGGTGTGA 60.858 61.111 0.00 0.00 0.00 3.58
8259 30839 2.240918 ATGGTGGCTGGGGTGTGAT 61.241 57.895 0.00 0.00 0.00 3.06
8260 30840 0.918799 ATGGTGGCTGGGGTGTGATA 60.919 55.000 0.00 0.00 0.00 2.15
8261 30841 0.918799 TGGTGGCTGGGGTGTGATAT 60.919 55.000 0.00 0.00 0.00 1.63
8262 30842 0.466189 GGTGGCTGGGGTGTGATATG 60.466 60.000 0.00 0.00 0.00 1.78
8263 30843 1.103398 GTGGCTGGGGTGTGATATGC 61.103 60.000 0.00 0.00 0.00 3.14
8264 30844 1.529244 GGCTGGGGTGTGATATGCC 60.529 63.158 0.00 0.00 0.00 4.40
8265 30845 1.227102 GCTGGGGTGTGATATGCCA 59.773 57.895 0.00 0.00 0.00 4.92
8266 30846 0.820891 GCTGGGGTGTGATATGCCAG 60.821 60.000 0.00 0.00 0.00 4.85
8267 30847 0.179009 CTGGGGTGTGATATGCCAGG 60.179 60.000 0.00 0.00 0.00 4.45
8268 30848 0.623031 TGGGGTGTGATATGCCAGGA 60.623 55.000 0.00 0.00 0.00 3.86
8269 30849 0.179018 GGGGTGTGATATGCCAGGAC 60.179 60.000 0.00 0.00 0.00 3.85
8270 30850 0.839946 GGGTGTGATATGCCAGGACT 59.160 55.000 0.00 0.00 0.00 3.85
8271 30851 1.202698 GGGTGTGATATGCCAGGACTC 60.203 57.143 0.00 0.00 0.00 3.36
8272 30852 1.486310 GGTGTGATATGCCAGGACTCA 59.514 52.381 0.00 0.00 0.00 3.41
8273 30853 2.484417 GGTGTGATATGCCAGGACTCAG 60.484 54.545 0.00 0.00 0.00 3.35
8274 30854 2.432146 GTGTGATATGCCAGGACTCAGA 59.568 50.000 0.00 0.00 0.00 3.27
8275 30855 3.070734 GTGTGATATGCCAGGACTCAGAT 59.929 47.826 0.00 0.00 0.00 2.90
8276 30856 3.713248 TGTGATATGCCAGGACTCAGATT 59.287 43.478 0.00 0.00 0.00 2.40
8277 30857 4.202295 TGTGATATGCCAGGACTCAGATTC 60.202 45.833 0.00 0.00 0.00 2.52
8278 30858 3.006217 TGATATGCCAGGACTCAGATTCG 59.994 47.826 0.00 0.00 0.00 3.34
8279 30859 0.467384 ATGCCAGGACTCAGATTCGG 59.533 55.000 0.00 0.00 0.00 4.30
8280 30860 0.614697 TGCCAGGACTCAGATTCGGA 60.615 55.000 0.00 0.00 0.00 4.55
8281 30861 0.179097 GCCAGGACTCAGATTCGGAC 60.179 60.000 0.00 0.00 0.00 4.79
8282 30862 1.186200 CCAGGACTCAGATTCGGACA 58.814 55.000 0.00 0.00 0.00 4.02
8283 30863 1.759445 CCAGGACTCAGATTCGGACAT 59.241 52.381 0.00 0.00 0.00 3.06
8284 30864 2.223923 CCAGGACTCAGATTCGGACATC 60.224 54.545 0.00 0.00 0.00 3.06
8285 30865 2.035632 AGGACTCAGATTCGGACATCC 58.964 52.381 4.91 4.91 0.00 3.51
8286 30866 1.757118 GGACTCAGATTCGGACATCCA 59.243 52.381 0.00 0.00 35.14 3.41
8287 30867 2.223923 GGACTCAGATTCGGACATCCAG 60.224 54.545 0.00 0.00 35.14 3.86
8288 30868 2.428890 GACTCAGATTCGGACATCCAGT 59.571 50.000 0.00 0.00 35.14 4.00
8289 30869 2.834549 ACTCAGATTCGGACATCCAGTT 59.165 45.455 0.00 0.00 35.14 3.16
8290 30870 3.261897 ACTCAGATTCGGACATCCAGTTT 59.738 43.478 0.00 0.00 35.14 2.66
8291 30871 4.466370 ACTCAGATTCGGACATCCAGTTTA 59.534 41.667 0.00 0.00 35.14 2.01
8292 30872 5.129485 ACTCAGATTCGGACATCCAGTTTAT 59.871 40.000 0.00 0.00 35.14 1.40
8293 30873 5.359756 TCAGATTCGGACATCCAGTTTATG 58.640 41.667 0.00 0.00 35.14 1.90
8302 30882 2.496942 CCAGTTTATGGCTGCAGGG 58.503 57.895 17.12 0.12 43.83 4.45
8303 30883 0.323725 CCAGTTTATGGCTGCAGGGT 60.324 55.000 17.12 0.00 43.83 4.34
8304 30884 1.098050 CAGTTTATGGCTGCAGGGTC 58.902 55.000 17.12 0.00 0.00 4.46
8305 30885 0.698238 AGTTTATGGCTGCAGGGTCA 59.302 50.000 17.12 0.00 0.00 4.02
8306 30886 1.098050 GTTTATGGCTGCAGGGTCAG 58.902 55.000 17.12 0.00 37.15 3.51
8307 30887 0.698238 TTTATGGCTGCAGGGTCAGT 59.302 50.000 17.12 0.00 36.49 3.41
8308 30888 0.035152 TTATGGCTGCAGGGTCAGTG 60.035 55.000 17.12 0.00 36.49 3.66
8309 30889 0.909133 TATGGCTGCAGGGTCAGTGA 60.909 55.000 17.12 0.00 36.49 3.41
8310 30890 1.782201 ATGGCTGCAGGGTCAGTGAA 61.782 55.000 17.12 0.00 36.49 3.18
8311 30891 1.001641 GGCTGCAGGGTCAGTGAAT 60.002 57.895 17.12 0.00 36.49 2.57
8312 30892 1.310933 GGCTGCAGGGTCAGTGAATG 61.311 60.000 17.12 0.00 36.49 2.67
8313 30893 0.321919 GCTGCAGGGTCAGTGAATGA 60.322 55.000 17.12 0.00 36.49 2.57
8314 30894 1.681166 GCTGCAGGGTCAGTGAATGAT 60.681 52.381 17.12 0.00 40.92 2.45
8315 30895 2.719739 CTGCAGGGTCAGTGAATGATT 58.280 47.619 5.57 0.00 40.92 2.57
8316 30896 3.087031 CTGCAGGGTCAGTGAATGATTT 58.913 45.455 5.57 0.00 40.92 2.17
8317 30897 2.821378 TGCAGGGTCAGTGAATGATTTG 59.179 45.455 0.00 0.00 40.92 2.32
8318 30898 2.165030 GCAGGGTCAGTGAATGATTTGG 59.835 50.000 0.00 0.00 40.92 3.28
8319 30899 2.165030 CAGGGTCAGTGAATGATTTGGC 59.835 50.000 0.00 0.00 40.92 4.52
8320 30900 2.042162 AGGGTCAGTGAATGATTTGGCT 59.958 45.455 0.00 0.00 40.92 4.75
8321 30901 2.165030 GGGTCAGTGAATGATTTGGCTG 59.835 50.000 0.00 0.00 40.92 4.85
8322 30902 3.084039 GGTCAGTGAATGATTTGGCTGA 58.916 45.455 0.00 4.12 40.92 4.26
8323 30903 3.698040 GGTCAGTGAATGATTTGGCTGAT 59.302 43.478 0.00 0.00 40.92 2.90
8324 30904 4.439700 GGTCAGTGAATGATTTGGCTGATG 60.440 45.833 0.00 0.00 40.92 3.07
8325 30905 3.129813 TCAGTGAATGATTTGGCTGATGC 59.870 43.478 0.00 0.00 33.47 3.91
8326 30906 5.940845 TCAGTGAATGATTTGGCTGATGCC 61.941 45.833 0.00 0.00 46.05 4.40
8335 30915 4.487412 GCTGATGCCTTGCACGCC 62.487 66.667 2.63 0.00 43.04 5.68
8336 30916 4.170062 CTGATGCCTTGCACGCCG 62.170 66.667 2.63 0.00 43.04 6.46
8337 30917 4.695993 TGATGCCTTGCACGCCGA 62.696 61.111 0.00 0.00 43.04 5.54
8338 30918 3.869272 GATGCCTTGCACGCCGAG 61.869 66.667 0.00 0.00 43.04 4.63
8339 30919 4.393155 ATGCCTTGCACGCCGAGA 62.393 61.111 0.00 0.00 43.04 4.04
8342 30922 4.680237 CCTTGCACGCCGAGACCA 62.680 66.667 0.00 0.00 0.00 4.02
8343 30923 2.434884 CTTGCACGCCGAGACCAT 60.435 61.111 0.00 0.00 0.00 3.55
8344 30924 2.741985 TTGCACGCCGAGACCATG 60.742 61.111 0.00 0.00 0.00 3.66
8345 30925 4.758251 TGCACGCCGAGACCATGG 62.758 66.667 11.19 11.19 0.00 3.66
8409 31003 4.253685 CGTGACAGGTTCAGATAACCATT 58.746 43.478 9.44 0.00 42.69 3.16
8474 31069 8.500753 TCATATGCGTTTATCTTTGTAACCTT 57.499 30.769 0.00 0.00 0.00 3.50
8492 31090 5.860648 ACCTTCTTTATCCCTTCTCCAAA 57.139 39.130 0.00 0.00 0.00 3.28
8505 31103 7.413446 TCCCTTCTCCAAATTGTAATCTGAAT 58.587 34.615 0.00 0.00 0.00 2.57
8523 31121 9.547753 AATCTGAATCAACTTTGTACGCTATAT 57.452 29.630 0.00 0.00 0.00 0.86
8554 31152 3.724374 GCGACCTGGCTATATAAACACA 58.276 45.455 0.00 0.00 0.00 3.72
8668 31266 1.481871 CTTCTTGCCATGGCCTCATT 58.518 50.000 33.44 0.00 41.09 2.57
8738 31336 3.895656 CCCGAACCAACTATATCCTCTGA 59.104 47.826 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 9.778741 TCTTTTAGAATCGCCACTTCATATATT 57.221 29.630 0.00 0.00 0.00 1.28
58 59 9.778741 TTCTTTTAGAATCGCCACTTCATATAT 57.221 29.630 0.00 0.00 0.00 0.86
59 60 9.261180 CTTCTTTTAGAATCGCCACTTCATATA 57.739 33.333 0.00 0.00 33.13 0.86
60 61 7.254932 GCTTCTTTTAGAATCGCCACTTCATAT 60.255 37.037 0.00 0.00 33.13 1.78
62 63 5.163713 GCTTCTTTTAGAATCGCCACTTCAT 60.164 40.000 0.00 0.00 33.13 2.57
64 65 4.393371 AGCTTCTTTTAGAATCGCCACTTC 59.607 41.667 0.00 0.00 33.13 3.01
65 66 4.327680 AGCTTCTTTTAGAATCGCCACTT 58.672 39.130 0.00 0.00 33.13 3.16
66 67 3.944087 AGCTTCTTTTAGAATCGCCACT 58.056 40.909 0.00 0.00 33.13 4.00
68 69 4.161565 TCCTAGCTTCTTTTAGAATCGCCA 59.838 41.667 0.00 0.00 33.13 5.69
69 70 4.694339 TCCTAGCTTCTTTTAGAATCGCC 58.306 43.478 0.00 0.00 33.13 5.54
70 71 5.235401 CCTTCCTAGCTTCTTTTAGAATCGC 59.765 44.000 0.00 0.00 33.13 4.58
71 72 5.755861 CCCTTCCTAGCTTCTTTTAGAATCG 59.244 44.000 0.00 0.00 33.13 3.34
72 73 6.058833 CCCCTTCCTAGCTTCTTTTAGAATC 58.941 44.000 0.00 0.00 33.13 2.52
74 75 4.227527 CCCCCTTCCTAGCTTCTTTTAGAA 59.772 45.833 0.00 0.00 32.50 2.10
76 77 3.685835 GCCCCCTTCCTAGCTTCTTTTAG 60.686 52.174 0.00 0.00 0.00 1.85
78 79 1.006043 GCCCCCTTCCTAGCTTCTTTT 59.994 52.381 0.00 0.00 0.00 2.27
79 80 0.626382 GCCCCCTTCCTAGCTTCTTT 59.374 55.000 0.00 0.00 0.00 2.52
83 84 1.010795 AATTGCCCCCTTCCTAGCTT 58.989 50.000 0.00 0.00 0.00 3.74
84 85 0.553333 GAATTGCCCCCTTCCTAGCT 59.447 55.000 0.00 0.00 0.00 3.32
85 86 0.553333 AGAATTGCCCCCTTCCTAGC 59.447 55.000 0.00 0.00 0.00 3.42
86 87 1.133668 CCAGAATTGCCCCCTTCCTAG 60.134 57.143 0.00 0.00 0.00 3.02
89 90 0.041090 TTCCAGAATTGCCCCCTTCC 59.959 55.000 0.00 0.00 0.00 3.46
90 91 1.005924 TCTTCCAGAATTGCCCCCTTC 59.994 52.381 0.00 0.00 0.00 3.46
91 92 1.084018 TCTTCCAGAATTGCCCCCTT 58.916 50.000 0.00 0.00 0.00 3.95
93 94 2.034878 GATTCTTCCAGAATTGCCCCC 58.965 52.381 0.59 0.00 44.41 5.40
94 95 1.678101 CGATTCTTCCAGAATTGCCCC 59.322 52.381 0.59 0.00 44.41 5.80
98 99 2.368439 TGGGCGATTCTTCCAGAATTG 58.632 47.619 8.78 8.78 44.41 2.32
99 100 2.806945 TGGGCGATTCTTCCAGAATT 57.193 45.000 0.59 0.00 44.41 2.17
100 101 2.806945 TTGGGCGATTCTTCCAGAAT 57.193 45.000 0.00 0.00 46.84 2.40
101 102 2.577606 TTTGGGCGATTCTTCCAGAA 57.422 45.000 0.00 0.00 38.78 3.02
102 103 2.039746 TCTTTTGGGCGATTCTTCCAGA 59.960 45.455 0.00 0.00 31.59 3.86
103 104 2.436417 TCTTTTGGGCGATTCTTCCAG 58.564 47.619 0.00 0.00 31.59 3.86
104 105 2.556622 GTTCTTTTGGGCGATTCTTCCA 59.443 45.455 0.00 0.00 0.00 3.53
105 106 2.820197 AGTTCTTTTGGGCGATTCTTCC 59.180 45.455 0.00 0.00 0.00 3.46
106 107 3.366374 CCAGTTCTTTTGGGCGATTCTTC 60.366 47.826 0.00 0.00 31.87 2.87
112 113 3.758172 GCCAGTTCTTTTGGGCGA 58.242 55.556 0.00 0.00 36.58 5.54
115 116 2.302587 TTAGGGCCAGTTCTTTTGGG 57.697 50.000 6.18 0.00 36.19 4.12
118 119 5.015284 AGGTCTAATTAGGGCCAGTTCTTTT 59.985 40.000 21.08 0.00 0.00 2.27
119 120 4.540502 AGGTCTAATTAGGGCCAGTTCTTT 59.459 41.667 21.08 0.00 0.00 2.52
120 121 4.112331 AGGTCTAATTAGGGCCAGTTCTT 58.888 43.478 21.08 0.00 0.00 2.52
121 122 3.737263 AGGTCTAATTAGGGCCAGTTCT 58.263 45.455 21.08 0.00 0.00 3.01
122 123 4.505324 AAGGTCTAATTAGGGCCAGTTC 57.495 45.455 21.08 0.00 0.00 3.01
124 125 6.592207 AATTAAGGTCTAATTAGGGCCAGT 57.408 37.500 21.08 14.15 0.00 4.00
125 126 8.990163 TTTAATTAAGGTCTAATTAGGGCCAG 57.010 34.615 21.08 0.00 32.84 4.85
187 188 4.612932 TGTAAACCGCGTAACAACTTTT 57.387 36.364 4.92 0.00 0.00 2.27
190 191 4.035441 ACATTTGTAAACCGCGTAACAACT 59.965 37.500 4.92 1.52 31.92 3.16
192 193 4.034858 TGACATTTGTAAACCGCGTAACAA 59.965 37.500 4.92 7.02 0.00 2.83
193 194 3.558829 TGACATTTGTAAACCGCGTAACA 59.441 39.130 4.92 0.20 0.00 2.41
194 195 3.901877 GTGACATTTGTAAACCGCGTAAC 59.098 43.478 4.92 0.00 0.00 2.50
195 196 3.059051 GGTGACATTTGTAAACCGCGTAA 60.059 43.478 4.92 0.00 0.00 3.18
196 197 2.479656 GGTGACATTTGTAAACCGCGTA 59.520 45.455 4.92 0.00 0.00 4.42
197 198 1.264826 GGTGACATTTGTAAACCGCGT 59.735 47.619 4.92 0.00 0.00 6.01
198 199 1.400500 GGGTGACATTTGTAAACCGCG 60.400 52.381 0.00 0.00 36.32 6.46
199 200 1.068125 GGGGTGACATTTGTAAACCGC 60.068 52.381 13.07 13.07 37.11 5.68
200 201 1.542472 GGGGGTGACATTTGTAAACCG 59.458 52.381 0.00 0.00 37.11 4.44
201 202 2.823747 GAGGGGGTGACATTTGTAAACC 59.176 50.000 0.00 0.00 35.37 3.27
202 203 2.823747 GGAGGGGGTGACATTTGTAAAC 59.176 50.000 0.00 0.00 0.00 2.01
203 204 2.225167 GGGAGGGGGTGACATTTGTAAA 60.225 50.000 0.00 0.00 0.00 2.01
204 205 1.356398 GGGAGGGGGTGACATTTGTAA 59.644 52.381 0.00 0.00 0.00 2.41
205 206 0.996583 GGGAGGGGGTGACATTTGTA 59.003 55.000 0.00 0.00 0.00 2.41
206 207 1.071314 TGGGAGGGGGTGACATTTGT 61.071 55.000 0.00 0.00 0.00 2.83
209 210 1.151587 ACTGGGAGGGGGTGACATT 60.152 57.895 0.00 0.00 0.00 2.71
210 211 1.925455 CACTGGGAGGGGGTGACAT 60.925 63.158 0.00 0.00 33.32 3.06
211 212 2.529136 CACTGGGAGGGGGTGACA 60.529 66.667 0.00 0.00 33.32 3.58
212 213 1.208165 ATTCACTGGGAGGGGGTGAC 61.208 60.000 0.00 0.00 39.30 3.67
213 214 1.163309 ATTCACTGGGAGGGGGTGA 59.837 57.895 0.00 0.00 38.07 4.02
214 215 1.304282 CATTCACTGGGAGGGGGTG 59.696 63.158 0.00 0.00 0.00 4.61
215 216 0.776080 AACATTCACTGGGAGGGGGT 60.776 55.000 0.00 0.00 0.00 4.95
217 218 0.392998 CGAACATTCACTGGGAGGGG 60.393 60.000 0.00 0.00 0.00 4.79
219 220 0.036010 AGCGAACATTCACTGGGAGG 60.036 55.000 0.00 0.00 0.00 4.30
220 221 1.081892 CAGCGAACATTCACTGGGAG 58.918 55.000 2.32 0.00 34.56 4.30
221 222 3.231734 CAGCGAACATTCACTGGGA 57.768 52.632 2.32 0.00 34.56 4.37
224 225 1.725641 TAGCCAGCGAACATTCACTG 58.274 50.000 3.16 3.16 37.16 3.66
225 226 2.679837 CAATAGCCAGCGAACATTCACT 59.320 45.455 0.00 0.00 0.00 3.41
226 227 2.792542 GCAATAGCCAGCGAACATTCAC 60.793 50.000 0.00 0.00 33.58 3.18
227 228 1.401552 GCAATAGCCAGCGAACATTCA 59.598 47.619 0.00 0.00 33.58 2.57
229 230 1.402968 CAGCAATAGCCAGCGAACATT 59.597 47.619 0.00 0.00 43.56 2.71
230 231 1.019673 CAGCAATAGCCAGCGAACAT 58.980 50.000 0.00 0.00 43.56 2.71
231 232 0.321564 ACAGCAATAGCCAGCGAACA 60.322 50.000 0.00 0.00 43.56 3.18
232 233 0.804989 AACAGCAATAGCCAGCGAAC 59.195 50.000 0.00 0.00 43.56 3.95
233 234 1.086696 GAACAGCAATAGCCAGCGAA 58.913 50.000 0.00 0.00 43.56 4.70
236 237 3.582714 AAAAGAACAGCAATAGCCAGC 57.417 42.857 0.00 0.00 43.56 4.85
238 239 7.341769 ACCAATATAAAAGAACAGCAATAGCCA 59.658 33.333 0.00 0.00 43.56 4.75
368 15456 8.863049 CACTTTATACATCCAAATTTTGCTCAC 58.137 33.333 3.50 0.00 0.00 3.51
447 17920 7.806149 ATTACAAACTTACGCATTTTAAGGC 57.194 32.000 0.00 0.00 31.78 4.35
521 18005 4.551388 GAAGAGAAAAGACGAGAGAAGCA 58.449 43.478 0.00 0.00 0.00 3.91
564 18300 3.192922 GTGCGTGTACATCCGGCC 61.193 66.667 0.00 0.00 0.00 6.13
565 18301 3.550992 CGTGCGTGTACATCCGGC 61.551 66.667 0.00 1.47 0.00 6.13
566 18302 3.550992 GCGTGCGTGTACATCCGG 61.551 66.667 0.00 0.00 0.00 5.14
567 18303 2.788176 CTGCGTGCGTGTACATCCG 61.788 63.158 0.00 0.00 0.00 4.18
1027 18808 4.766891 CCTCCTGTAGAATCCTCTCATCTC 59.233 50.000 0.00 0.00 32.70 2.75
1038 18819 2.293677 CGTCGCATACCTCCTGTAGAAT 59.706 50.000 0.00 0.00 31.61 2.40
1318 21873 1.787847 GTCACCGCCATGTTTCTCG 59.212 57.895 0.00 0.00 0.00 4.04
1340 21895 1.006832 GCGCATACACGGACTCAAAT 58.993 50.000 0.30 0.00 0.00 2.32
1408 21963 5.441718 AAAGTCATCCTTCCAGCTATCAA 57.558 39.130 0.00 0.00 31.27 2.57
1445 22130 1.591619 CACTGATGCTCTATGTGCACG 59.408 52.381 13.13 0.00 43.59 5.34
1489 22174 2.163818 TCGAGACGGCAAAACAAGAT 57.836 45.000 0.00 0.00 0.00 2.40
1504 22189 4.253685 TGAACTTAGCCTGGAAAATCGAG 58.746 43.478 0.00 0.00 0.00 4.04
1909 22597 2.701587 CAAAGTGTGGAAGCACGGA 58.298 52.632 0.00 0.00 43.61 4.69
1977 22665 2.166829 ACTGTTTCAGCAACAACCACA 58.833 42.857 0.00 0.00 45.11 4.17
2146 22834 6.712241 GATGAAGACTTGTCATCGAAAAGA 57.288 37.500 0.92 0.00 41.37 2.52
2376 23065 6.039717 TGCTGAGGTCAATATAAAAAGGATGC 59.960 38.462 0.00 0.00 0.00 3.91
2410 23099 3.081804 GCCACAGTAACTGCAACCTAAT 58.918 45.455 0.00 0.00 34.37 1.73
2421 23111 2.518949 CAATTCATGCGCCACAGTAAC 58.481 47.619 4.18 0.00 0.00 2.50
2432 23122 3.181469 ACCATTGATGAGCCAATTCATGC 60.181 43.478 0.00 0.00 37.90 4.06
2501 23191 1.386525 CCCATGTGGCAAATCCCTCG 61.387 60.000 0.00 0.00 0.00 4.63
2622 23319 7.230747 TCCATTGTGGAAAGAAAGAATCTACA 58.769 34.615 0.00 0.00 45.00 2.74
2649 23346 5.814705 CCTATCAAGAAACTGTGTCCAGATC 59.185 44.000 6.15 0.00 41.50 2.75
2673 23370 0.952984 GCCTGAGAGCAGTGGTTGTC 60.953 60.000 0.00 0.00 40.63 3.18
2778 23606 3.435671 GGTTTTGGAGAATGTAGTCCACG 59.564 47.826 0.00 0.00 42.75 4.94
2876 23713 6.019318 CAGTACGCACTGTTGTTACTTAAACT 60.019 38.462 7.67 0.00 46.03 2.66
2896 23733 7.383029 TGTTGGTAATAGCATATTACGCAGTAC 59.617 37.037 11.57 8.50 45.76 2.73
3017 23854 0.108585 TGACTGAAGTTGCTCCCCAC 59.891 55.000 0.00 0.00 0.00 4.61
3048 23887 6.993786 TGTTAATGCCACGAAATGAATCTA 57.006 33.333 0.00 0.00 0.00 1.98
3056 23895 5.837437 AGTGAAAATGTTAATGCCACGAAA 58.163 33.333 0.00 0.00 0.00 3.46
3293 24132 4.298103 AGGTAAGAAGAGTGAGTCGGTA 57.702 45.455 0.00 0.00 0.00 4.02
3311 24150 5.635120 AGAAAAAGAATGCCAAGTCTAGGT 58.365 37.500 0.00 0.00 28.61 3.08
3438 24277 3.313012 TGGAGTCATGTAGTGTTTCCG 57.687 47.619 0.00 0.00 35.54 4.30
3451 24290 2.439409 CAATGGACAAGCATGGAGTCA 58.561 47.619 0.00 0.00 34.04 3.41
3494 24334 8.807948 AGCATGTTTACCAACTAGTATGATTT 57.192 30.769 0.00 0.00 33.58 2.17
3538 24379 6.934083 GTCTTCAAAGAACAGAAATCTCTCCT 59.066 38.462 0.00 0.00 36.68 3.69
3548 24389 9.035890 TCCTAGAATATGTCTTCAAAGAACAGA 57.964 33.333 0.00 0.00 37.84 3.41
3596 24437 5.762045 CATTAAACAAGGGCAGGATAATCG 58.238 41.667 0.00 0.00 0.00 3.34
3668 24509 6.239036 GCTAATTTATCAAACCATCCACCTCC 60.239 42.308 0.00 0.00 0.00 4.30
3669 24510 6.321181 TGCTAATTTATCAAACCATCCACCTC 59.679 38.462 0.00 0.00 0.00 3.85
3730 24572 9.265901 ACAGATGCTACAACAATACATAAGATC 57.734 33.333 0.00 0.00 0.00 2.75
3794 24637 6.980051 ACGATCGCTAAATTTTACTCCTTT 57.020 33.333 16.60 0.00 0.00 3.11
3795 24638 6.592607 TCAACGATCGCTAAATTTTACTCCTT 59.407 34.615 16.60 0.00 0.00 3.36
4487 25465 0.313987 TGATACCGCTCAGGCATACG 59.686 55.000 0.00 0.00 46.52 3.06
4493 25472 5.098178 AAGTTGTTCTTGATACCGCTCAGG 61.098 45.833 0.00 0.00 39.54 3.86
4498 25477 5.350365 TCATGTAAGTTGTTCTTGATACCGC 59.650 40.000 0.00 0.00 37.56 5.68
4600 25579 7.741785 TGACTCAGATTTAAACCACCTCTTAA 58.258 34.615 0.00 0.00 0.00 1.85
4694 25673 7.277396 TGTGCCTATCTACCTTACCAAATTAC 58.723 38.462 0.00 0.00 0.00 1.89
4810 25790 8.756927 TGGCAACCATCTGATTTAAATCAATAA 58.243 29.630 26.57 17.27 44.20 1.40
4835 25815 2.295253 ACCGCGGTCTAGATCTTTTG 57.705 50.000 28.70 0.00 0.00 2.44
4850 25830 1.065551 ACTGAAACTGCAGAAAACCGC 59.934 47.619 23.35 2.78 39.20 5.68
4852 25832 5.831997 ACATAACTGAAACTGCAGAAAACC 58.168 37.500 23.35 5.12 39.20 3.27
4934 25924 5.936372 TCTGAATCTGACACTTCCATTTCAG 59.064 40.000 0.00 0.00 37.43 3.02
5029 26019 9.329913 CATACAAGTACATTGCTACAGAAAAAC 57.670 33.333 0.00 0.00 43.15 2.43
5378 26442 7.279090 TCAGTCAACGAGATCAAGTTTTAACAA 59.721 33.333 0.00 0.00 0.00 2.83
5554 26620 8.349983 AGCTTATCACGTTTAAGTTTCAACAAT 58.650 29.630 13.70 0.00 0.00 2.71
5629 26698 9.226606 CCAGTTCCATTTACATTCAACTTAGTA 57.773 33.333 0.00 0.00 0.00 1.82
5642 26711 8.336801 ACTCTGTAAAATCCAGTTCCATTTAC 57.663 34.615 0.00 0.00 37.12 2.01
5668 26737 5.165911 CTGCAAGCTCATCGTCATATTTT 57.834 39.130 0.00 0.00 0.00 1.82
5713 26782 4.287067 TCCATTAGTGAGAGCTTCTTGGTT 59.713 41.667 0.00 0.00 0.00 3.67
5750 26819 1.383523 TTCAACGGTCACATGTTGCA 58.616 45.000 0.00 0.00 43.91 4.08
5840 26909 1.032114 GCTGGCGGGCAATAGAAAGT 61.032 55.000 5.54 0.00 0.00 2.66
5903 26972 8.097038 TGTGAAAGAACACTATAATCAGCTTCT 58.903 33.333 0.00 0.00 40.87 2.85
5936 27005 5.590259 GGACCTACAGGATTTACGTACAGTA 59.410 44.000 1.29 0.00 38.94 2.74
6001 27070 8.058847 TGCCAATCCAAAGTAAAAGATATAGGT 58.941 33.333 0.00 0.00 0.00 3.08
6319 27389 9.448587 AGGAACCTGTAGGAAATATACAGTAAT 57.551 33.333 4.64 0.00 45.68 1.89
6320 27390 8.849543 AGGAACCTGTAGGAAATATACAGTAA 57.150 34.615 4.64 0.00 45.68 2.24
6333 27403 6.301169 AGAAGAAACATAGGAACCTGTAGG 57.699 41.667 3.36 0.00 42.17 3.18
6361 27431 9.778741 TTTCTGAAAGATAAGTGTCACATAGTT 57.221 29.630 5.62 0.00 46.36 2.24
6503 27573 4.123506 TCACGTGTGAAGATGTTAAAGCA 58.876 39.130 16.51 0.00 36.53 3.91
6530 27600 1.548269 CGGAGGAAGAAGAGAAGTGCT 59.452 52.381 0.00 0.00 0.00 4.40
6590 27660 8.783660 ATGGAAGAAGTAATCATAGGAGTACA 57.216 34.615 16.23 0.00 44.77 2.90
6620 27690 1.206072 CTGCAGAACAGCGCAAGTC 59.794 57.895 8.42 2.70 40.19 3.01
6731 27801 7.235812 ACACCTAAGACTTGTAATCTTTCCTCT 59.764 37.037 0.00 0.00 37.57 3.69
6764 27834 8.254508 AGCTTTGTTAGTTTAACATGGTCAAAA 58.745 29.630 0.00 0.00 46.89 2.44
6952 28027 2.036475 ACACACAAGGTAGCTCACAGAG 59.964 50.000 0.00 0.00 0.00 3.35
6956 28031 2.135933 GACACACACAAGGTAGCTCAC 58.864 52.381 0.00 0.00 0.00 3.51
6963 28038 1.472480 GCAACTTGACACACACAAGGT 59.528 47.619 0.00 0.00 44.61 3.50
6974 28049 2.872245 TGAGTACAGCTTGCAACTTGAC 59.128 45.455 11.33 7.03 0.00 3.18
6975 28050 3.133691 CTGAGTACAGCTTGCAACTTGA 58.866 45.455 11.33 0.00 37.33 3.02
6976 28051 2.225019 CCTGAGTACAGCTTGCAACTTG 59.775 50.000 0.00 0.00 42.25 3.16
7117 28196 5.104735 ACACAGAGATAAAAGGGTCCTCATC 60.105 44.000 0.00 0.00 0.00 2.92
7136 28215 4.354071 TCAACAACATGTCAACACACAG 57.646 40.909 0.00 0.00 34.48 3.66
7148 28227 4.024387 ACGACTTTTACGCATCAACAACAT 60.024 37.500 0.00 0.00 0.00 2.71
7225 28304 8.446394 AGAAACATCTCATGATTGGATATTCCT 58.554 33.333 0.00 0.00 37.46 3.36
7299 28381 7.214467 TCTTGTTGACAAAAACAGAAGAACT 57.786 32.000 0.00 0.00 40.93 3.01
7360 28442 7.763985 GGATCCCGAAACAAATTCACAAATATT 59.236 33.333 0.00 0.00 37.96 1.28
7445 28527 0.921896 ATAGATGGTTGGGTGCTGCT 59.078 50.000 0.00 0.00 0.00 4.24
7476 30046 4.935578 TCTCCTAAGGTGTCAGATGAAGA 58.064 43.478 0.00 0.00 0.00 2.87
7620 30191 1.600023 AACAAAATTCGCCACCGAGA 58.400 45.000 0.00 0.00 45.35 4.04
7623 30194 4.267928 TGTTTTTAACAAAATTCGCCACCG 59.732 37.500 0.00 0.00 38.72 4.94
7648 30219 7.669722 ACTGTGATTAAATGTACCAATGGAACT 59.330 33.333 6.16 0.00 0.00 3.01
7735 30306 6.711277 ACAAGGAAGTTCACATTAGCTATGA 58.289 36.000 5.01 0.00 37.69 2.15
7749 30320 5.710099 TGAACTGACAAGAAACAAGGAAGTT 59.290 36.000 0.00 0.00 0.00 2.66
7817 30388 1.154035 GAATTCGGGCTTTGTGCGG 60.154 57.895 0.00 0.00 44.05 5.69
7831 30402 2.300152 TGCTTCAGTGTCCTCTCGAATT 59.700 45.455 0.00 0.00 0.00 2.17
7844 30415 3.065371 CGTTTTCAAGGTTCTGCTTCAGT 59.935 43.478 0.00 0.00 32.61 3.41
7855 30426 0.872388 GATCCGCACGTTTTCAAGGT 59.128 50.000 0.00 0.00 0.00 3.50
7889 30460 2.042537 TCGCTCCTGATGCCCTCT 60.043 61.111 0.00 0.00 0.00 3.69
7919 30490 2.027605 CACGCACCGTCTGTCTGT 59.972 61.111 0.00 0.00 38.32 3.41
7920 30491 1.730902 CTCACGCACCGTCTGTCTG 60.731 63.158 0.00 0.00 38.32 3.51
7921 30492 2.645567 CTCACGCACCGTCTGTCT 59.354 61.111 0.00 0.00 38.32 3.41
7922 30493 3.106407 GCTCACGCACCGTCTGTC 61.106 66.667 0.00 0.00 38.32 3.51
7946 30517 2.639286 CAACACGTCAGGGCTTGC 59.361 61.111 0.00 0.00 0.00 4.01
7961 30532 1.561643 ACCTAGCACTCTAGCAGCAA 58.438 50.000 0.00 0.00 40.73 3.91
7965 30536 3.095912 TGGTAACCTAGCACTCTAGCA 57.904 47.619 0.00 0.00 40.73 3.49
7984 30555 6.331845 TGCATTCTTATTGCCAACTACAATG 58.668 36.000 0.00 0.00 38.20 2.82
7985 30556 6.528537 TGCATTCTTATTGCCAACTACAAT 57.471 33.333 0.00 0.00 39.39 2.71
7990 30561 5.640357 CACAAATGCATTCTTATTGCCAACT 59.360 36.000 13.38 0.00 39.39 3.16
8030 30601 6.127535 CCAAATATCATCTCAAGCCACAGTTT 60.128 38.462 0.00 0.00 0.00 2.66
8031 30602 5.359009 CCAAATATCATCTCAAGCCACAGTT 59.641 40.000 0.00 0.00 0.00 3.16
8048 30628 8.519526 CACCACTACAAATGTACAACCAAATAT 58.480 33.333 0.00 0.00 0.00 1.28
8144 30724 6.484288 ACATTCTCATTCTTCATACAACCCA 58.516 36.000 0.00 0.00 0.00 4.51
8169 30749 7.302948 TGGATATGCTACCTAGTTTCTCCTTA 58.697 38.462 0.00 0.00 0.00 2.69
8174 30754 9.950496 CATTAATGGATATGCTACCTAGTTTCT 57.050 33.333 7.62 0.00 0.00 2.52
8191 30771 9.081204 CCATCCACATAAATCTTCATTAATGGA 57.919 33.333 15.36 5.89 36.66 3.41
8192 30772 8.863086 ACCATCCACATAAATCTTCATTAATGG 58.137 33.333 15.36 0.63 34.87 3.16
8193 30773 9.687210 CACCATCCACATAAATCTTCATTAATG 57.313 33.333 9.29 9.29 0.00 1.90
8194 30774 8.362639 GCACCATCCACATAAATCTTCATTAAT 58.637 33.333 0.00 0.00 0.00 1.40
8195 30775 7.341512 TGCACCATCCACATAAATCTTCATTAA 59.658 33.333 0.00 0.00 0.00 1.40
8196 30776 6.832900 TGCACCATCCACATAAATCTTCATTA 59.167 34.615 0.00 0.00 0.00 1.90
8197 30777 5.657745 TGCACCATCCACATAAATCTTCATT 59.342 36.000 0.00 0.00 0.00 2.57
8198 30778 5.202765 TGCACCATCCACATAAATCTTCAT 58.797 37.500 0.00 0.00 0.00 2.57
8199 30779 4.598022 TGCACCATCCACATAAATCTTCA 58.402 39.130 0.00 0.00 0.00 3.02
8200 30780 5.779529 ATGCACCATCCACATAAATCTTC 57.220 39.130 0.00 0.00 0.00 2.87
8201 30781 6.154877 TGAAATGCACCATCCACATAAATCTT 59.845 34.615 0.00 0.00 0.00 2.40
8202 30782 5.657745 TGAAATGCACCATCCACATAAATCT 59.342 36.000 0.00 0.00 0.00 2.40
8203 30783 5.904941 TGAAATGCACCATCCACATAAATC 58.095 37.500 0.00 0.00 0.00 2.17
8204 30784 5.936187 TGAAATGCACCATCCACATAAAT 57.064 34.783 0.00 0.00 0.00 1.40
8205 30785 5.421374 TCATGAAATGCACCATCCACATAAA 59.579 36.000 0.00 0.00 46.21 1.40
8206 30786 4.954826 TCATGAAATGCACCATCCACATAA 59.045 37.500 0.00 0.00 46.21 1.90
8207 30787 4.534797 TCATGAAATGCACCATCCACATA 58.465 39.130 0.00 0.00 46.21 2.29
8208 30788 3.367321 TCATGAAATGCACCATCCACAT 58.633 40.909 0.00 0.00 46.21 3.21
8209 30789 2.805194 TCATGAAATGCACCATCCACA 58.195 42.857 0.00 0.00 46.21 4.17
8210 30790 3.382227 TCATCATGAAATGCACCATCCAC 59.618 43.478 0.00 0.00 46.21 4.02
8211 30791 3.633418 TCATCATGAAATGCACCATCCA 58.367 40.909 0.00 0.00 46.21 3.41
8212 30792 4.659111 TTCATCATGAAATGCACCATCC 57.341 40.909 0.00 0.00 46.21 3.51
8213 30793 6.085555 AGATTCATCATGAAATGCACCATC 57.914 37.500 3.63 0.00 46.21 3.51
8214 30794 7.002276 TCTAGATTCATCATGAAATGCACCAT 58.998 34.615 3.63 0.00 46.21 3.55
8215 30795 6.261603 GTCTAGATTCATCATGAAATGCACCA 59.738 38.462 3.63 0.00 46.21 4.17
8216 30796 6.261603 TGTCTAGATTCATCATGAAATGCACC 59.738 38.462 3.63 0.00 46.21 5.01
8217 30797 7.255491 TGTCTAGATTCATCATGAAATGCAC 57.745 36.000 3.63 0.00 46.21 4.57
8218 30798 7.040686 CCATGTCTAGATTCATCATGAAATGCA 60.041 37.037 17.50 0.00 46.21 3.96
8219 30799 7.040617 ACCATGTCTAGATTCATCATGAAATGC 60.041 37.037 17.50 0.00 46.21 3.56
8221 30801 7.447545 CCACCATGTCTAGATTCATCATGAAAT 59.552 37.037 17.50 0.00 40.12 2.17
8222 30802 6.769341 CCACCATGTCTAGATTCATCATGAAA 59.231 38.462 17.50 0.00 40.12 2.69
8223 30803 6.293698 CCACCATGTCTAGATTCATCATGAA 58.706 40.000 17.50 1.59 41.09 2.57
8224 30804 5.744007 GCCACCATGTCTAGATTCATCATGA 60.744 44.000 17.50 0.00 38.35 3.07
8225 30805 4.454847 GCCACCATGTCTAGATTCATCATG 59.545 45.833 11.50 11.50 36.60 3.07
8226 30806 4.350225 AGCCACCATGTCTAGATTCATCAT 59.650 41.667 0.00 0.00 0.00 2.45
8227 30807 3.713248 AGCCACCATGTCTAGATTCATCA 59.287 43.478 0.00 0.00 0.00 3.07
8228 30808 4.063689 CAGCCACCATGTCTAGATTCATC 58.936 47.826 0.00 0.00 0.00 2.92
8229 30809 3.181447 CCAGCCACCATGTCTAGATTCAT 60.181 47.826 0.00 0.00 0.00 2.57
8230 30810 2.171237 CCAGCCACCATGTCTAGATTCA 59.829 50.000 0.00 0.00 0.00 2.57
8231 30811 2.486191 CCCAGCCACCATGTCTAGATTC 60.486 54.545 0.00 0.00 0.00 2.52
8232 30812 1.492176 CCCAGCCACCATGTCTAGATT 59.508 52.381 0.00 0.00 0.00 2.40
8233 30813 1.135094 CCCAGCCACCATGTCTAGAT 58.865 55.000 0.00 0.00 0.00 1.98
8234 30814 0.982852 CCCCAGCCACCATGTCTAGA 60.983 60.000 0.00 0.00 0.00 2.43
8235 30815 1.274703 ACCCCAGCCACCATGTCTAG 61.275 60.000 0.00 0.00 0.00 2.43
8236 30816 1.229820 ACCCCAGCCACCATGTCTA 60.230 57.895 0.00 0.00 0.00 2.59
8237 30817 2.532715 ACCCCAGCCACCATGTCT 60.533 61.111 0.00 0.00 0.00 3.41
8238 30818 2.361610 CACCCCAGCCACCATGTC 60.362 66.667 0.00 0.00 0.00 3.06
8239 30819 3.185203 ACACCCCAGCCACCATGT 61.185 61.111 0.00 0.00 0.00 3.21
8240 30820 2.503846 ATCACACCCCAGCCACCATG 62.504 60.000 0.00 0.00 0.00 3.66
8241 30821 0.918799 TATCACACCCCAGCCACCAT 60.919 55.000 0.00 0.00 0.00 3.55
8242 30822 0.918799 ATATCACACCCCAGCCACCA 60.919 55.000 0.00 0.00 0.00 4.17
8243 30823 0.466189 CATATCACACCCCAGCCACC 60.466 60.000 0.00 0.00 0.00 4.61
8244 30824 1.103398 GCATATCACACCCCAGCCAC 61.103 60.000 0.00 0.00 0.00 5.01
8245 30825 1.227102 GCATATCACACCCCAGCCA 59.773 57.895 0.00 0.00 0.00 4.75
8246 30826 1.529244 GGCATATCACACCCCAGCC 60.529 63.158 0.00 0.00 0.00 4.85
8247 30827 0.820891 CTGGCATATCACACCCCAGC 60.821 60.000 0.00 0.00 36.94 4.85
8248 30828 0.179009 CCTGGCATATCACACCCCAG 60.179 60.000 0.00 0.00 42.07 4.45
8249 30829 0.623031 TCCTGGCATATCACACCCCA 60.623 55.000 0.00 0.00 0.00 4.96
8250 30830 0.179018 GTCCTGGCATATCACACCCC 60.179 60.000 0.00 0.00 0.00 4.95
8251 30831 0.839946 AGTCCTGGCATATCACACCC 59.160 55.000 0.00 0.00 0.00 4.61
8252 30832 1.486310 TGAGTCCTGGCATATCACACC 59.514 52.381 0.00 0.00 0.00 4.16
8253 30833 2.432146 TCTGAGTCCTGGCATATCACAC 59.568 50.000 0.00 0.00 0.00 3.82
8254 30834 2.750814 TCTGAGTCCTGGCATATCACA 58.249 47.619 0.00 0.00 0.00 3.58
8255 30835 4.314121 GAATCTGAGTCCTGGCATATCAC 58.686 47.826 0.00 0.00 0.00 3.06
8256 30836 3.006217 CGAATCTGAGTCCTGGCATATCA 59.994 47.826 0.00 0.00 0.00 2.15
8257 30837 3.583806 CGAATCTGAGTCCTGGCATATC 58.416 50.000 0.00 0.00 0.00 1.63
8258 30838 2.301296 CCGAATCTGAGTCCTGGCATAT 59.699 50.000 0.00 0.00 0.00 1.78
8259 30839 1.688735 CCGAATCTGAGTCCTGGCATA 59.311 52.381 0.00 0.00 0.00 3.14
8260 30840 0.467384 CCGAATCTGAGTCCTGGCAT 59.533 55.000 0.00 0.00 0.00 4.40
8261 30841 0.614697 TCCGAATCTGAGTCCTGGCA 60.615 55.000 0.00 0.00 0.00 4.92
8262 30842 0.179097 GTCCGAATCTGAGTCCTGGC 60.179 60.000 0.00 0.00 0.00 4.85
8263 30843 1.186200 TGTCCGAATCTGAGTCCTGG 58.814 55.000 0.00 0.00 0.00 4.45
8264 30844 2.223923 GGATGTCCGAATCTGAGTCCTG 60.224 54.545 0.00 0.00 0.00 3.86
8265 30845 2.035632 GGATGTCCGAATCTGAGTCCT 58.964 52.381 0.00 0.00 0.00 3.85
8266 30846 1.757118 TGGATGTCCGAATCTGAGTCC 59.243 52.381 0.00 0.96 39.43 3.85
8267 30847 2.428890 ACTGGATGTCCGAATCTGAGTC 59.571 50.000 0.00 0.00 39.43 3.36
8268 30848 2.461695 ACTGGATGTCCGAATCTGAGT 58.538 47.619 0.00 0.00 39.43 3.41
8269 30849 3.533606 AACTGGATGTCCGAATCTGAG 57.466 47.619 0.00 0.00 39.43 3.35
8270 30850 3.981071 AAACTGGATGTCCGAATCTGA 57.019 42.857 0.00 0.00 39.43 3.27
8271 30851 5.663795 CATAAACTGGATGTCCGAATCTG 57.336 43.478 0.00 0.00 39.43 2.90
8285 30865 1.098050 GACCCTGCAGCCATAAACTG 58.902 55.000 8.66 0.00 38.22 3.16
8286 30866 0.698238 TGACCCTGCAGCCATAAACT 59.302 50.000 8.66 0.00 0.00 2.66
8287 30867 1.098050 CTGACCCTGCAGCCATAAAC 58.902 55.000 8.66 0.00 0.00 2.01
8288 30868 0.698238 ACTGACCCTGCAGCCATAAA 59.302 50.000 8.66 0.00 39.51 1.40
8289 30869 0.035152 CACTGACCCTGCAGCCATAA 60.035 55.000 8.66 0.00 39.51 1.90
8290 30870 0.909133 TCACTGACCCTGCAGCCATA 60.909 55.000 8.66 0.00 39.51 2.74
8291 30871 1.782201 TTCACTGACCCTGCAGCCAT 61.782 55.000 8.66 0.00 39.51 4.40
8292 30872 1.782201 ATTCACTGACCCTGCAGCCA 61.782 55.000 8.66 4.87 39.51 4.75
8293 30873 1.001641 ATTCACTGACCCTGCAGCC 60.002 57.895 8.66 0.00 39.51 4.85
8294 30874 0.321919 TCATTCACTGACCCTGCAGC 60.322 55.000 8.66 0.00 39.51 5.25
8295 30875 2.414994 ATCATTCACTGACCCTGCAG 57.585 50.000 6.78 6.78 41.63 4.41
8296 30876 2.821378 CAAATCATTCACTGACCCTGCA 59.179 45.455 0.00 0.00 36.48 4.41
8297 30877 2.165030 CCAAATCATTCACTGACCCTGC 59.835 50.000 0.00 0.00 36.48 4.85
8298 30878 2.165030 GCCAAATCATTCACTGACCCTG 59.835 50.000 0.00 0.00 36.48 4.45
8299 30879 2.042162 AGCCAAATCATTCACTGACCCT 59.958 45.455 0.00 0.00 36.48 4.34
8300 30880 2.165030 CAGCCAAATCATTCACTGACCC 59.835 50.000 0.00 0.00 36.48 4.46
8301 30881 3.084039 TCAGCCAAATCATTCACTGACC 58.916 45.455 0.00 0.00 36.48 4.02
8302 30882 4.669318 CATCAGCCAAATCATTCACTGAC 58.331 43.478 0.00 0.00 37.02 3.51
8303 30883 3.129813 GCATCAGCCAAATCATTCACTGA 59.870 43.478 0.00 0.00 38.42 3.41
8304 30884 3.444916 GCATCAGCCAAATCATTCACTG 58.555 45.455 0.00 0.00 33.58 3.66
8305 30885 3.795623 GCATCAGCCAAATCATTCACT 57.204 42.857 0.00 0.00 33.58 3.41
8325 30905 3.958147 ATGGTCTCGGCGTGCAAGG 62.958 63.158 6.85 0.00 0.00 3.61
8326 30906 2.434884 ATGGTCTCGGCGTGCAAG 60.435 61.111 6.85 0.00 0.00 4.01
8327 30907 2.741985 CATGGTCTCGGCGTGCAA 60.742 61.111 6.85 0.00 0.00 4.08
8328 30908 4.758251 CCATGGTCTCGGCGTGCA 62.758 66.667 6.85 0.00 0.00 4.57
8334 30914 2.124570 CAAGGGCCATGGTCTCGG 60.125 66.667 17.62 1.56 0.00 4.63
8335 30915 1.746615 CACAAGGGCCATGGTCTCG 60.747 63.158 17.62 7.47 0.00 4.04
8336 30916 0.251341 AACACAAGGGCCATGGTCTC 60.251 55.000 17.62 7.14 0.00 3.36
8337 30917 0.540365 CAACACAAGGGCCATGGTCT 60.540 55.000 17.62 10.09 0.00 3.85
8338 30918 0.539438 TCAACACAAGGGCCATGGTC 60.539 55.000 14.67 11.66 0.00 4.02
8339 30919 0.105760 TTCAACACAAGGGCCATGGT 60.106 50.000 14.67 0.00 0.00 3.55
8340 30920 0.318120 GTTCAACACAAGGGCCATGG 59.682 55.000 14.06 7.63 0.00 3.66
8341 30921 0.039256 CGTTCAACACAAGGGCCATG 60.039 55.000 6.18 6.80 0.00 3.66
8342 30922 0.179004 TCGTTCAACACAAGGGCCAT 60.179 50.000 6.18 0.00 0.00 4.40
8343 30923 0.394488 TTCGTTCAACACAAGGGCCA 60.394 50.000 6.18 0.00 0.00 5.36
8344 30924 0.741915 TTTCGTTCAACACAAGGGCC 59.258 50.000 0.00 0.00 0.00 5.80
8345 30925 2.793278 ATTTCGTTCAACACAAGGGC 57.207 45.000 0.00 0.00 0.00 5.19
8346 30926 5.160641 CCAATATTTCGTTCAACACAAGGG 58.839 41.667 0.00 0.00 0.00 3.95
8347 30927 5.768317 ACCAATATTTCGTTCAACACAAGG 58.232 37.500 0.00 0.00 0.00 3.61
8348 30928 6.359617 GTGACCAATATTTCGTTCAACACAAG 59.640 38.462 0.00 0.00 0.00 3.16
8349 30929 6.202937 GTGACCAATATTTCGTTCAACACAA 58.797 36.000 0.00 0.00 0.00 3.33
8409 31003 4.920828 GTTGGAAACCTCCTGGCA 57.079 55.556 0.00 0.00 42.21 4.92
8474 31069 9.408648 GATTACAATTTGGAGAAGGGATAAAGA 57.591 33.333 0.78 0.00 0.00 2.52
8492 31090 7.962918 GCGTACAAAGTTGATTCAGATTACAAT 59.037 33.333 0.00 0.00 0.00 2.71
8505 31103 6.459670 TCCTGATATAGCGTACAAAGTTGA 57.540 37.500 0.00 0.00 0.00 3.18
8554 31152 3.319198 ATCCTGGGCGACGGTTGT 61.319 61.111 0.00 0.00 0.00 3.32
8577 31175 1.634960 TACCATGTGGAGGAACGTCA 58.365 50.000 5.96 0.00 38.94 4.35
8630 31228 3.965026 CTGCGGTGGAGAGGAGGGA 62.965 68.421 0.00 0.00 0.00 4.20
8631 31229 3.465403 CTGCGGTGGAGAGGAGGG 61.465 72.222 0.00 0.00 0.00 4.30
8720 31318 3.704566 TGCGTCAGAGGATATAGTTGGTT 59.295 43.478 0.00 0.00 0.00 3.67
8738 31336 4.760047 GGCGTGATCTGGGTGCGT 62.760 66.667 0.00 0.00 0.00 5.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.