Multiple sequence alignment - TraesCS5A01G190900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G190900 chr5A 100.000 2793 0 0 1 2793 395287041 395284249 0.000000e+00 5158.0
1 TraesCS5A01G190900 chr5D 90.936 1357 68 22 580 1910 302826276 302827603 0.000000e+00 1773.0
2 TraesCS5A01G190900 chr5D 93.913 460 23 5 2114 2571 302827603 302828059 0.000000e+00 689.0
3 TraesCS5A01G190900 chr5B 89.676 1298 64 22 657 1927 347529049 347530303 0.000000e+00 1591.0
4 TraesCS5A01G190900 chr5B 81.973 294 40 9 140 426 347528112 347528399 1.290000e-58 237.0
5 TraesCS5A01G190900 chr7B 93.694 222 10 4 2575 2793 635904958 635904738 2.070000e-86 329.0
6 TraesCS5A01G190900 chr7B 93.182 220 14 1 2575 2793 123741990 123741771 3.470000e-84 322.0
7 TraesCS5A01G190900 chr2B 93.274 223 14 1 2569 2790 43808149 43808371 7.460000e-86 327.0
8 TraesCS5A01G190900 chr2B 92.727 220 15 1 2575 2793 32147553 32147334 1.610000e-82 316.0
9 TraesCS5A01G190900 chr4A 93.213 221 13 1 2575 2793 589485920 589485700 9.650000e-85 324.0
10 TraesCS5A01G190900 chr1D 93.780 209 13 0 2582 2790 337195953 337196161 5.810000e-82 315.0
11 TraesCS5A01G190900 chr7D 92.130 216 16 1 2574 2788 115182838 115182623 1.260000e-78 303.0
12 TraesCS5A01G190900 chr1A 91.705 217 17 1 2575 2790 556596489 556596705 1.630000e-77 300.0
13 TraesCS5A01G190900 chr1A 94.444 36 2 0 2073 2108 139555639 139555674 3.890000e-04 56.5
14 TraesCS5A01G190900 chr1B 90.950 221 18 1 2575 2793 361009873 361010093 2.100000e-76 296.0
15 TraesCS5A01G190900 chr3D 84.896 192 16 6 1923 2108 580652309 580652493 6.150000e-42 182.0
16 TraesCS5A01G190900 chr4D 84.746 118 10 5 1934 2043 507121312 507121195 8.180000e-21 111.0
17 TraesCS5A01G190900 chr6B 79.245 159 28 5 2196 2352 586532612 586532767 3.800000e-19 106.0
18 TraesCS5A01G190900 chr6D 100.000 28 0 0 467 494 430453514 430453541 5.000000e-03 52.8
19 TraesCS5A01G190900 chr6A 100.000 28 0 0 467 494 577011905 577011932 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G190900 chr5A 395284249 395287041 2792 True 5158 5158 100.0000 1 2793 1 chr5A.!!$R1 2792
1 TraesCS5A01G190900 chr5D 302826276 302828059 1783 False 1231 1773 92.4245 580 2571 2 chr5D.!!$F1 1991
2 TraesCS5A01G190900 chr5B 347528112 347530303 2191 False 914 1591 85.8245 140 1927 2 chr5B.!!$F1 1787

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.036952 CATGCTACCGCCAGGGATAG 60.037 60.0 0.0 0.0 43.47 2.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1963 2442 0.036952 AACATGTCCAGCTCAGTCCG 60.037 55.0 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.666190 TTCACTGCACTCCGCTGC 60.666 61.111 0.00 0.00 43.01 5.25
18 19 4.687215 TCACTGCACTCCGCTGCC 62.687 66.667 0.00 0.00 43.01 4.85
19 20 4.994471 CACTGCACTCCGCTGCCA 62.994 66.667 0.00 0.00 43.01 4.92
20 21 4.254709 ACTGCACTCCGCTGCCAA 62.255 61.111 0.00 0.00 43.01 4.52
21 22 3.429141 CTGCACTCCGCTGCCAAG 61.429 66.667 0.00 0.00 43.06 3.61
22 23 4.254709 TGCACTCCGCTGCCAAGT 62.255 61.111 0.00 0.00 43.06 3.16
23 24 2.047274 GCACTCCGCTGCCAAGTA 60.047 61.111 0.00 0.00 37.77 2.24
24 25 2.391389 GCACTCCGCTGCCAAGTAC 61.391 63.158 0.00 0.00 37.77 2.73
25 26 1.293498 CACTCCGCTGCCAAGTACT 59.707 57.895 0.00 0.00 0.00 2.73
26 27 0.737715 CACTCCGCTGCCAAGTACTC 60.738 60.000 0.00 0.00 0.00 2.59
27 28 1.153549 CTCCGCTGCCAAGTACTCC 60.154 63.158 0.00 0.00 0.00 3.85
28 29 1.608717 CTCCGCTGCCAAGTACTCCT 61.609 60.000 0.00 0.00 0.00 3.69
29 30 1.192146 TCCGCTGCCAAGTACTCCTT 61.192 55.000 0.00 0.00 0.00 3.36
30 31 0.741221 CCGCTGCCAAGTACTCCTTC 60.741 60.000 0.00 0.00 0.00 3.46
31 32 0.247736 CGCTGCCAAGTACTCCTTCT 59.752 55.000 0.00 0.00 0.00 2.85
32 33 1.476891 CGCTGCCAAGTACTCCTTCTA 59.523 52.381 0.00 0.00 0.00 2.10
33 34 2.094182 CGCTGCCAAGTACTCCTTCTAA 60.094 50.000 0.00 0.00 0.00 2.10
34 35 3.616560 CGCTGCCAAGTACTCCTTCTAAA 60.617 47.826 0.00 0.00 0.00 1.85
35 36 3.935828 GCTGCCAAGTACTCCTTCTAAAG 59.064 47.826 0.00 0.00 0.00 1.85
49 50 5.819825 CTTCTAAAGGAAACCATGCTACC 57.180 43.478 0.00 0.00 33.07 3.18
50 51 3.869065 TCTAAAGGAAACCATGCTACCG 58.131 45.455 0.00 0.00 0.00 4.02
51 52 1.173913 AAAGGAAACCATGCTACCGC 58.826 50.000 0.00 0.00 0.00 5.68
52 53 0.679960 AAGGAAACCATGCTACCGCC 60.680 55.000 0.00 0.00 34.43 6.13
53 54 1.377987 GGAAACCATGCTACCGCCA 60.378 57.895 0.00 0.00 34.43 5.69
54 55 1.376609 GGAAACCATGCTACCGCCAG 61.377 60.000 0.00 0.00 34.43 4.85
55 56 1.376609 GAAACCATGCTACCGCCAGG 61.377 60.000 0.00 0.00 45.13 4.45
56 57 2.837031 AAACCATGCTACCGCCAGGG 62.837 60.000 0.00 0.00 43.47 4.45
57 58 3.479203 CCATGCTACCGCCAGGGA 61.479 66.667 0.00 0.00 43.47 4.20
58 59 2.822637 CCATGCTACCGCCAGGGAT 61.823 63.158 0.00 0.00 43.47 3.85
59 60 1.480212 CCATGCTACCGCCAGGGATA 61.480 60.000 0.00 0.00 43.47 2.59
60 61 0.036952 CATGCTACCGCCAGGGATAG 60.037 60.000 0.00 0.00 43.47 2.08
61 62 1.194781 ATGCTACCGCCAGGGATAGG 61.195 60.000 0.00 0.00 43.47 2.57
62 63 2.584391 GCTACCGCCAGGGATAGGG 61.584 68.421 0.00 0.00 43.47 3.53
63 64 1.913762 CTACCGCCAGGGATAGGGG 60.914 68.421 0.00 0.00 43.47 4.79
103 104 3.289834 CCACCACCTGCACTGCAC 61.290 66.667 0.00 0.00 33.79 4.57
104 105 3.653009 CACCACCTGCACTGCACG 61.653 66.667 0.00 0.00 33.79 5.34
105 106 4.935495 ACCACCTGCACTGCACGG 62.935 66.667 14.51 14.51 33.79 4.94
110 111 3.730761 CTGCACTGCACGGGCTTC 61.731 66.667 12.74 0.00 41.91 3.86
129 130 2.350895 CCCGACAGTGGCAATGGA 59.649 61.111 19.96 0.00 0.00 3.41
130 131 1.303236 CCCGACAGTGGCAATGGAA 60.303 57.895 19.96 0.00 0.00 3.53
131 132 1.308069 CCCGACAGTGGCAATGGAAG 61.308 60.000 19.96 9.44 0.00 3.46
132 133 1.308069 CCGACAGTGGCAATGGAAGG 61.308 60.000 19.96 14.47 0.00 3.46
133 134 1.308069 CGACAGTGGCAATGGAAGGG 61.308 60.000 19.96 0.00 0.00 3.95
134 135 0.967380 GACAGTGGCAATGGAAGGGG 60.967 60.000 19.96 0.00 0.00 4.79
135 136 1.683365 CAGTGGCAATGGAAGGGGG 60.683 63.158 7.12 0.00 0.00 5.40
172 173 1.344189 GCTAGGGGAGTTAGGGTTCCT 60.344 57.143 0.00 0.00 37.71 3.36
173 174 2.897446 GCTAGGGGAGTTAGGGTTCCTT 60.897 54.545 0.00 0.00 34.61 3.36
177 178 2.460669 GGGAGTTAGGGTTCCTTCGTA 58.539 52.381 0.00 0.00 34.61 3.43
197 198 2.131709 CGCCTCGGGAAGGGATACA 61.132 63.158 0.00 0.00 46.32 2.29
198 199 1.446366 GCCTCGGGAAGGGATACAC 59.554 63.158 0.00 0.00 46.32 2.90
206 207 2.745821 GGGAAGGGATACACGTTGAAAC 59.254 50.000 0.00 0.00 39.74 2.78
225 227 1.628846 ACGGGAGTTTTCTAGCACCAT 59.371 47.619 0.00 0.00 43.33 3.55
245 247 2.279741 TCTTCAGATGTGCAATACCGC 58.720 47.619 0.00 0.00 0.00 5.68
274 276 9.709495 CCCTTCTCAATCTAATATTCTTCTCTG 57.291 37.037 0.00 0.00 0.00 3.35
296 298 9.227490 CTCTGTCTAATTCGTTATGTAGTTCTG 57.773 37.037 0.00 0.00 0.00 3.02
298 300 7.317390 TGTCTAATTCGTTATGTAGTTCTGCA 58.683 34.615 0.00 0.00 0.00 4.41
301 303 8.869897 TCTAATTCGTTATGTAGTTCTGCAAAG 58.130 33.333 0.00 0.00 0.00 2.77
302 304 7.435068 AATTCGTTATGTAGTTCTGCAAAGT 57.565 32.000 0.00 0.00 0.00 2.66
303 305 5.839262 TCGTTATGTAGTTCTGCAAAGTG 57.161 39.130 0.00 0.00 0.00 3.16
307 309 2.135139 TGTAGTTCTGCAAAGTGAGCG 58.865 47.619 0.00 0.00 33.85 5.03
311 313 2.035961 AGTTCTGCAAAGTGAGCGTAGA 59.964 45.455 0.00 0.00 33.85 2.59
319 321 3.802948 AAGTGAGCGTAGATGGTTAGG 57.197 47.619 0.00 0.00 0.00 2.69
326 328 7.069085 AGTGAGCGTAGATGGTTAGGTTTATTA 59.931 37.037 0.00 0.00 0.00 0.98
327 329 7.871463 GTGAGCGTAGATGGTTAGGTTTATTAT 59.129 37.037 0.00 0.00 0.00 1.28
329 331 9.918630 GAGCGTAGATGGTTAGGTTTATTATAA 57.081 33.333 0.00 0.00 0.00 0.98
382 388 7.768582 TCTTAGATTTATTCAGACATTTGGCGA 59.231 33.333 0.00 0.00 0.00 5.54
387 393 1.144969 TCAGACATTTGGCGACGTTC 58.855 50.000 0.00 0.00 0.00 3.95
402 409 3.059570 CGACGTTCACATTGACTAGAAGC 59.940 47.826 0.00 0.00 0.00 3.86
404 411 3.244078 ACGTTCACATTGACTAGAAGCCA 60.244 43.478 0.00 0.00 0.00 4.75
405 412 3.935203 CGTTCACATTGACTAGAAGCCAT 59.065 43.478 0.00 0.00 0.00 4.40
407 414 5.634896 GTTCACATTGACTAGAAGCCATTG 58.365 41.667 0.00 0.00 0.00 2.82
412 419 7.994911 TCACATTGACTAGAAGCCATTGAATAT 59.005 33.333 0.00 0.00 0.00 1.28
426 433 8.829746 AGCCATTGAATATCAAGATGTATCCTA 58.170 33.333 0.00 0.00 40.05 2.94
427 434 9.107177 GCCATTGAATATCAAGATGTATCCTAG 57.893 37.037 0.00 0.00 40.05 3.02
438 462 3.386768 TGTATCCTAGATTTGCTCGGC 57.613 47.619 0.00 0.00 29.71 5.54
444 468 2.546795 CCTAGATTTGCTCGGCTTCGAT 60.547 50.000 0.00 0.00 42.46 3.59
445 469 2.890808 AGATTTGCTCGGCTTCGATA 57.109 45.000 0.00 0.00 42.46 2.92
449 473 0.179084 TTGCTCGGCTTCGATAAGGG 60.179 55.000 0.00 0.00 42.46 3.95
453 477 1.113517 TCGGCTTCGATAAGGGAGGG 61.114 60.000 0.00 0.00 38.07 4.30
455 479 1.054978 GGCTTCGATAAGGGAGGGGT 61.055 60.000 0.00 0.00 32.98 4.95
458 482 2.116238 CTTCGATAAGGGAGGGGTGAA 58.884 52.381 0.00 0.00 0.00 3.18
461 485 2.090719 TCGATAAGGGAGGGGTGAAGAT 60.091 50.000 0.00 0.00 0.00 2.40
464 488 2.293598 AAGGGAGGGGTGAAGATGAT 57.706 50.000 0.00 0.00 0.00 2.45
487 513 2.507992 CTTCAGCTCGCTCCGGTG 60.508 66.667 0.00 0.00 0.00 4.94
488 514 2.989253 TTCAGCTCGCTCCGGTGA 60.989 61.111 7.92 0.43 37.14 4.02
491 517 2.169789 CAGCTCGCTCCGGTGATTG 61.170 63.158 7.92 0.00 31.87 2.67
497 523 0.172578 CGCTCCGGTGATTGTAGTCA 59.827 55.000 7.92 0.00 0.00 3.41
505 531 4.669318 CGGTGATTGTAGTCATCGTTAGT 58.331 43.478 2.36 0.00 45.21 2.24
513 539 7.400599 TTGTAGTCATCGTTAGTTGGTCTAT 57.599 36.000 0.00 0.00 0.00 1.98
515 541 5.263968 AGTCATCGTTAGTTGGTCTATGG 57.736 43.478 0.00 0.00 0.00 2.74
625 651 9.926158 TGTTACCGTGTTAGAAAAAGTATATGA 57.074 29.630 0.00 0.00 0.00 2.15
642 853 6.757010 AGTATATGATTTGTCGTTCTGGTGAC 59.243 38.462 0.00 0.00 35.67 3.67
647 858 2.148916 TGTCGTTCTGGTGACATGTC 57.851 50.000 19.27 19.27 40.02 3.06
701 1150 3.049674 AAGCCACGTGCACCATCG 61.050 61.111 10.91 1.40 44.83 3.84
723 1172 1.006337 CGCCCAACAACCACATTGG 60.006 57.895 0.00 0.00 43.20 3.16
728 1177 0.318120 CAACAACCACATTGGCCCTC 59.682 55.000 0.00 0.00 42.67 4.30
799 1251 1.144093 CCAACCACTCCCTTTACACCA 59.856 52.381 0.00 0.00 0.00 4.17
800 1252 2.423660 CCAACCACTCCCTTTACACCAA 60.424 50.000 0.00 0.00 0.00 3.67
801 1253 2.884639 CAACCACTCCCTTTACACCAAG 59.115 50.000 0.00 0.00 0.00 3.61
802 1254 2.414612 ACCACTCCCTTTACACCAAGA 58.585 47.619 0.00 0.00 0.00 3.02
803 1255 2.986728 ACCACTCCCTTTACACCAAGAT 59.013 45.455 0.00 0.00 0.00 2.40
804 1256 3.397955 ACCACTCCCTTTACACCAAGATT 59.602 43.478 0.00 0.00 0.00 2.40
805 1257 4.141018 ACCACTCCCTTTACACCAAGATTT 60.141 41.667 0.00 0.00 0.00 2.17
806 1258 4.459337 CCACTCCCTTTACACCAAGATTTC 59.541 45.833 0.00 0.00 0.00 2.17
807 1259 5.070001 CACTCCCTTTACACCAAGATTTCA 58.930 41.667 0.00 0.00 0.00 2.69
808 1260 5.534654 CACTCCCTTTACACCAAGATTTCAA 59.465 40.000 0.00 0.00 0.00 2.69
809 1261 6.040391 CACTCCCTTTACACCAAGATTTCAAA 59.960 38.462 0.00 0.00 0.00 2.69
810 1262 6.609616 ACTCCCTTTACACCAAGATTTCAAAA 59.390 34.615 0.00 0.00 0.00 2.44
811 1263 7.125053 ACTCCCTTTACACCAAGATTTCAAAAA 59.875 33.333 0.00 0.00 0.00 1.94
937 1389 7.652909 CAGAAGACAAAGCAAAATTACCATTGA 59.347 33.333 0.00 0.00 0.00 2.57
940 1392 8.314143 AGACAAAGCAAAATTACCATTGATTG 57.686 30.769 0.00 0.00 35.54 2.67
978 1456 4.150897 AGTGGCTTGTGTGTTAGAAGAA 57.849 40.909 0.00 0.00 31.56 2.52
981 1459 3.211045 GGCTTGTGTGTTAGAAGAACCA 58.789 45.455 0.00 0.00 31.56 3.67
1149 1627 2.663196 CTCAGGTCCAACCCCGTC 59.337 66.667 0.00 0.00 39.75 4.79
1154 1632 0.903454 AGGTCCAACCCCGTCTACAG 60.903 60.000 0.00 0.00 39.75 2.74
1170 1648 2.110967 CAGGAAGATGCCCGTGCTG 61.111 63.158 0.00 0.00 36.55 4.41
1210 1688 2.105128 GCGAGTCCCTGGTCATCG 59.895 66.667 7.16 7.16 36.51 3.84
1305 1783 1.218316 CCGGTTCTGGGCAGAGTAC 59.782 63.158 0.00 0.00 38.88 2.73
1353 1831 1.751351 GATCGTGACCACTGGATCTGA 59.249 52.381 0.71 0.00 0.00 3.27
1359 1837 0.670546 ACCACTGGATCTGAAACGCG 60.671 55.000 3.53 3.53 0.00 6.01
1397 1875 6.692849 TCTGGTAATTGATCATGGCTATCT 57.307 37.500 0.00 0.00 0.00 1.98
1436 1914 1.156736 CCATTCACCACTTCGGACAC 58.843 55.000 0.00 0.00 38.63 3.67
1905 2384 6.036083 CACATACGTCTCTGAATAAACAAGGG 59.964 42.308 0.00 0.00 0.00 3.95
1906 2385 4.618920 ACGTCTCTGAATAAACAAGGGT 57.381 40.909 0.00 0.00 0.00 4.34
1907 2386 5.733620 ACGTCTCTGAATAAACAAGGGTA 57.266 39.130 0.00 0.00 0.00 3.69
1908 2387 6.105397 ACGTCTCTGAATAAACAAGGGTAA 57.895 37.500 0.00 0.00 0.00 2.85
1909 2388 6.708285 ACGTCTCTGAATAAACAAGGGTAAT 58.292 36.000 0.00 0.00 0.00 1.89
1910 2389 7.844009 ACGTCTCTGAATAAACAAGGGTAATA 58.156 34.615 0.00 0.00 0.00 0.98
1911 2390 8.483758 ACGTCTCTGAATAAACAAGGGTAATAT 58.516 33.333 0.00 0.00 0.00 1.28
1912 2391 9.326413 CGTCTCTGAATAAACAAGGGTAATATT 57.674 33.333 0.00 0.00 0.00 1.28
1921 2400 9.787435 ATAAACAAGGGTAATATTATTCAGCGA 57.213 29.630 0.00 0.00 0.00 4.93
1922 2401 8.514330 AAACAAGGGTAATATTATTCAGCGAA 57.486 30.769 0.00 0.00 0.00 4.70
1923 2402 7.492352 ACAAGGGTAATATTATTCAGCGAAC 57.508 36.000 0.00 0.00 0.00 3.95
1924 2403 7.280356 ACAAGGGTAATATTATTCAGCGAACT 58.720 34.615 0.00 0.00 0.00 3.01
1925 2404 7.773690 ACAAGGGTAATATTATTCAGCGAACTT 59.226 33.333 0.00 0.00 0.00 2.66
1926 2405 8.621286 CAAGGGTAATATTATTCAGCGAACTTT 58.379 33.333 0.00 0.00 0.00 2.66
1927 2406 8.154649 AGGGTAATATTATTCAGCGAACTTTG 57.845 34.615 0.00 0.00 0.00 2.77
1928 2407 6.856426 GGGTAATATTATTCAGCGAACTTTGC 59.144 38.462 0.00 0.00 0.00 3.68
1929 2408 7.255139 GGGTAATATTATTCAGCGAACTTTGCT 60.255 37.037 0.00 0.00 45.31 3.91
1930 2409 8.770828 GGTAATATTATTCAGCGAACTTTGCTA 58.229 33.333 3.01 0.00 41.72 3.49
1931 2410 9.798885 GTAATATTATTCAGCGAACTTTGCTAG 57.201 33.333 3.01 0.00 41.72 3.42
1932 2411 8.662781 AATATTATTCAGCGAACTTTGCTAGA 57.337 30.769 3.01 1.94 41.72 2.43
1933 2412 5.779806 TTATTCAGCGAACTTTGCTAGAC 57.220 39.130 3.01 0.00 41.72 2.59
1934 2413 3.386768 TTCAGCGAACTTTGCTAGACT 57.613 42.857 3.01 0.00 41.72 3.24
1935 2414 3.386768 TCAGCGAACTTTGCTAGACTT 57.613 42.857 3.01 0.00 41.72 3.01
1936 2415 4.514781 TCAGCGAACTTTGCTAGACTTA 57.485 40.909 3.01 0.00 41.72 2.24
1937 2416 4.235360 TCAGCGAACTTTGCTAGACTTAC 58.765 43.478 3.01 0.00 41.72 2.34
1938 2417 3.987868 CAGCGAACTTTGCTAGACTTACA 59.012 43.478 3.01 0.00 41.72 2.41
1939 2418 4.090642 CAGCGAACTTTGCTAGACTTACAG 59.909 45.833 3.01 0.00 41.72 2.74
1940 2419 4.022242 AGCGAACTTTGCTAGACTTACAGA 60.022 41.667 1.22 0.00 41.87 3.41
1941 2420 4.090210 GCGAACTTTGCTAGACTTACAGAC 59.910 45.833 0.00 0.00 0.00 3.51
1942 2421 4.321217 CGAACTTTGCTAGACTTACAGACG 59.679 45.833 0.00 0.00 0.00 4.18
1943 2422 3.576648 ACTTTGCTAGACTTACAGACGC 58.423 45.455 0.00 0.00 0.00 5.19
1944 2423 3.005472 ACTTTGCTAGACTTACAGACGCA 59.995 43.478 0.00 0.00 0.00 5.24
1945 2424 3.653539 TTGCTAGACTTACAGACGCAA 57.346 42.857 0.00 0.00 34.01 4.85
1947 2426 1.921230 GCTAGACTTACAGACGCAAGC 59.079 52.381 0.00 0.00 45.62 4.01
1948 2427 2.531206 CTAGACTTACAGACGCAAGCC 58.469 52.381 0.00 0.00 45.62 4.35
1949 2428 0.679505 AGACTTACAGACGCAAGCCA 59.320 50.000 0.00 0.00 45.62 4.75
1950 2429 0.790814 GACTTACAGACGCAAGCCAC 59.209 55.000 0.00 0.00 45.62 5.01
1951 2430 0.944311 ACTTACAGACGCAAGCCACG 60.944 55.000 0.00 0.00 45.62 4.94
1952 2431 1.626654 CTTACAGACGCAAGCCACGG 61.627 60.000 0.00 0.00 45.62 4.94
1953 2432 2.089887 TTACAGACGCAAGCCACGGA 62.090 55.000 0.00 0.00 45.62 4.69
1954 2433 2.089887 TACAGACGCAAGCCACGGAA 62.090 55.000 0.00 0.00 45.62 4.30
1955 2434 2.110213 AGACGCAAGCCACGGAAA 59.890 55.556 0.00 0.00 45.62 3.13
1956 2435 1.302511 AGACGCAAGCCACGGAAAT 60.303 52.632 0.00 0.00 45.62 2.17
1957 2436 0.889186 AGACGCAAGCCACGGAAATT 60.889 50.000 0.00 0.00 45.62 1.82
1958 2437 0.800012 GACGCAAGCCACGGAAATTA 59.200 50.000 0.00 0.00 45.62 1.40
1959 2438 1.400494 GACGCAAGCCACGGAAATTAT 59.600 47.619 0.00 0.00 45.62 1.28
1960 2439 1.816224 ACGCAAGCCACGGAAATTATT 59.184 42.857 0.00 0.00 45.62 1.40
1961 2440 2.230266 ACGCAAGCCACGGAAATTATTT 59.770 40.909 0.00 0.00 45.62 1.40
1962 2441 3.440872 ACGCAAGCCACGGAAATTATTTA 59.559 39.130 0.00 0.00 45.62 1.40
1963 2442 3.789224 CGCAAGCCACGGAAATTATTTAC 59.211 43.478 0.00 0.00 0.00 2.01
1972 2451 5.079397 CGGAAATTATTTACGGACTGAGC 57.921 43.478 13.95 0.00 43.13 4.26
1973 2452 4.809426 CGGAAATTATTTACGGACTGAGCT 59.191 41.667 13.95 0.00 43.13 4.09
1974 2453 5.276868 CGGAAATTATTTACGGACTGAGCTG 60.277 44.000 13.95 0.00 43.13 4.24
1975 2454 5.007724 GGAAATTATTTACGGACTGAGCTGG 59.992 44.000 0.00 0.00 0.00 4.85
1976 2455 5.353394 AATTATTTACGGACTGAGCTGGA 57.647 39.130 0.00 0.00 0.00 3.86
1977 2456 2.674796 ATTTACGGACTGAGCTGGAC 57.325 50.000 0.00 0.00 0.00 4.02
1978 2457 1.334160 TTTACGGACTGAGCTGGACA 58.666 50.000 0.00 0.00 0.00 4.02
1979 2458 1.557099 TTACGGACTGAGCTGGACAT 58.443 50.000 0.00 0.00 0.00 3.06
1980 2459 0.817654 TACGGACTGAGCTGGACATG 59.182 55.000 0.00 0.00 0.00 3.21
1981 2460 1.188219 ACGGACTGAGCTGGACATGT 61.188 55.000 0.00 0.00 0.00 3.21
1982 2461 0.036952 CGGACTGAGCTGGACATGTT 60.037 55.000 0.00 0.00 0.00 2.71
1983 2462 1.609061 CGGACTGAGCTGGACATGTTT 60.609 52.381 0.00 0.00 0.00 2.83
1984 2463 2.353704 CGGACTGAGCTGGACATGTTTA 60.354 50.000 0.00 0.00 0.00 2.01
1985 2464 3.674997 GGACTGAGCTGGACATGTTTAA 58.325 45.455 0.00 0.00 0.00 1.52
1986 2465 3.437049 GGACTGAGCTGGACATGTTTAAC 59.563 47.826 0.00 0.00 0.00 2.01
1987 2466 4.319177 GACTGAGCTGGACATGTTTAACT 58.681 43.478 0.00 0.00 0.00 2.24
1988 2467 4.067896 ACTGAGCTGGACATGTTTAACTG 58.932 43.478 0.00 0.00 0.00 3.16
1989 2468 3.411446 TGAGCTGGACATGTTTAACTGG 58.589 45.455 0.00 0.00 0.00 4.00
1990 2469 3.072330 TGAGCTGGACATGTTTAACTGGA 59.928 43.478 0.00 0.00 0.00 3.86
1991 2470 4.072131 GAGCTGGACATGTTTAACTGGAA 58.928 43.478 0.00 0.00 0.00 3.53
1992 2471 4.469657 AGCTGGACATGTTTAACTGGAAA 58.530 39.130 0.00 0.00 0.00 3.13
1993 2472 4.278419 AGCTGGACATGTTTAACTGGAAAC 59.722 41.667 0.00 1.72 39.35 2.78
1994 2473 4.278419 GCTGGACATGTTTAACTGGAAACT 59.722 41.667 0.00 0.00 39.57 2.66
1995 2474 5.762045 CTGGACATGTTTAACTGGAAACTG 58.238 41.667 0.00 6.97 39.57 3.16
1996 2475 4.582656 TGGACATGTTTAACTGGAAACTGG 59.417 41.667 0.00 4.32 39.57 4.00
1997 2476 4.022329 GGACATGTTTAACTGGAAACTGGG 60.022 45.833 0.00 2.55 39.57 4.45
1998 2477 3.895041 ACATGTTTAACTGGAAACTGGGG 59.105 43.478 0.00 0.81 39.57 4.96
1999 2478 2.952116 TGTTTAACTGGAAACTGGGGG 58.048 47.619 0.00 0.00 39.57 5.40
2000 2479 1.616865 GTTTAACTGGAAACTGGGGGC 59.383 52.381 0.00 0.00 36.55 5.80
2001 2480 0.854218 TTAACTGGAAACTGGGGGCA 59.146 50.000 0.00 0.00 0.00 5.36
2002 2481 0.404040 TAACTGGAAACTGGGGGCAG 59.596 55.000 0.00 0.00 0.00 4.85
2003 2482 1.655114 AACTGGAAACTGGGGGCAGT 61.655 55.000 0.00 0.00 36.92 4.40
2004 2483 1.604593 CTGGAAACTGGGGGCAGTG 60.605 63.158 0.00 0.00 35.30 3.66
2005 2484 2.283173 GGAAACTGGGGGCAGTGG 60.283 66.667 0.00 0.00 35.30 4.00
2006 2485 2.283173 GAAACTGGGGGCAGTGGG 60.283 66.667 0.00 0.00 35.30 4.61
2007 2486 2.780924 AAACTGGGGGCAGTGGGA 60.781 61.111 0.00 0.00 35.30 4.37
2008 2487 3.146828 AAACTGGGGGCAGTGGGAC 62.147 63.158 0.00 0.00 35.30 4.46
2014 2493 4.129148 GGGCAGTGGGACCCATCC 62.129 72.222 18.51 17.48 46.22 3.51
2015 2494 3.017581 GGCAGTGGGACCCATCCT 61.018 66.667 18.51 7.22 45.46 3.24
2016 2495 2.616458 GGCAGTGGGACCCATCCTT 61.616 63.158 18.51 0.00 45.46 3.36
2017 2496 1.379044 GCAGTGGGACCCATCCTTG 60.379 63.158 18.51 13.81 45.46 3.61
2018 2497 1.852157 GCAGTGGGACCCATCCTTGA 61.852 60.000 18.51 0.00 45.46 3.02
2019 2498 0.698238 CAGTGGGACCCATCCTTGAA 59.302 55.000 18.51 0.00 45.46 2.69
2020 2499 1.075374 CAGTGGGACCCATCCTTGAAA 59.925 52.381 18.51 0.00 45.46 2.69
2021 2500 2.003072 AGTGGGACCCATCCTTGAAAT 58.997 47.619 18.51 0.00 45.46 2.17
2022 2501 2.024941 AGTGGGACCCATCCTTGAAATC 60.025 50.000 18.51 0.00 45.46 2.17
2023 2502 1.999295 TGGGACCCATCCTTGAAATCA 59.001 47.619 9.95 0.00 45.46 2.57
2024 2503 2.025037 TGGGACCCATCCTTGAAATCAG 60.025 50.000 9.95 0.00 45.46 2.90
2025 2504 2.027385 GGACCCATCCTTGAAATCAGC 58.973 52.381 0.00 0.00 42.45 4.26
2026 2505 1.672881 GACCCATCCTTGAAATCAGCG 59.327 52.381 0.00 0.00 0.00 5.18
2027 2506 1.027357 CCCATCCTTGAAATCAGCGG 58.973 55.000 0.00 0.00 0.00 5.52
2028 2507 1.027357 CCATCCTTGAAATCAGCGGG 58.973 55.000 0.00 0.00 0.00 6.13
2029 2508 1.027357 CATCCTTGAAATCAGCGGGG 58.973 55.000 0.00 0.00 0.00 5.73
2030 2509 0.106519 ATCCTTGAAATCAGCGGGGG 60.107 55.000 0.00 0.00 0.00 5.40
2031 2510 1.204786 TCCTTGAAATCAGCGGGGGA 61.205 55.000 0.00 0.00 0.00 4.81
2032 2511 0.749454 CCTTGAAATCAGCGGGGGAG 60.749 60.000 0.00 0.00 0.00 4.30
2033 2512 0.253044 CTTGAAATCAGCGGGGGAGA 59.747 55.000 0.00 0.00 0.00 3.71
2034 2513 0.253044 TTGAAATCAGCGGGGGAGAG 59.747 55.000 0.00 0.00 0.00 3.20
2035 2514 1.147153 GAAATCAGCGGGGGAGAGG 59.853 63.158 0.00 0.00 0.00 3.69
2036 2515 2.330924 GAAATCAGCGGGGGAGAGGG 62.331 65.000 0.00 0.00 0.00 4.30
2037 2516 2.840203 AAATCAGCGGGGGAGAGGGA 62.840 60.000 0.00 0.00 0.00 4.20
2038 2517 2.628187 AATCAGCGGGGGAGAGGGAT 62.628 60.000 0.00 0.00 0.00 3.85
2039 2518 2.628187 ATCAGCGGGGGAGAGGGATT 62.628 60.000 0.00 0.00 0.00 3.01
2040 2519 2.770048 AGCGGGGGAGAGGGATTG 60.770 66.667 0.00 0.00 0.00 2.67
2041 2520 3.878667 GCGGGGGAGAGGGATTGG 61.879 72.222 0.00 0.00 0.00 3.16
2042 2521 2.366972 CGGGGGAGAGGGATTGGT 60.367 66.667 0.00 0.00 0.00 3.67
2043 2522 2.444256 CGGGGGAGAGGGATTGGTC 61.444 68.421 0.00 0.00 0.00 4.02
2044 2523 1.307866 GGGGGAGAGGGATTGGTCA 60.308 63.158 0.00 0.00 0.00 4.02
2045 2524 0.699231 GGGGGAGAGGGATTGGTCAT 60.699 60.000 0.00 0.00 0.00 3.06
2046 2525 1.226311 GGGGAGAGGGATTGGTCATT 58.774 55.000 0.00 0.00 0.00 2.57
2047 2526 1.133668 GGGGAGAGGGATTGGTCATTG 60.134 57.143 0.00 0.00 0.00 2.82
2048 2527 1.133668 GGGAGAGGGATTGGTCATTGG 60.134 57.143 0.00 0.00 0.00 3.16
2049 2528 1.566231 GGAGAGGGATTGGTCATTGGT 59.434 52.381 0.00 0.00 0.00 3.67
2050 2529 2.024941 GGAGAGGGATTGGTCATTGGTT 60.025 50.000 0.00 0.00 0.00 3.67
2051 2530 3.202151 GGAGAGGGATTGGTCATTGGTTA 59.798 47.826 0.00 0.00 0.00 2.85
2052 2531 4.455606 GAGAGGGATTGGTCATTGGTTAG 58.544 47.826 0.00 0.00 0.00 2.34
2053 2532 3.852578 AGAGGGATTGGTCATTGGTTAGT 59.147 43.478 0.00 0.00 0.00 2.24
2054 2533 3.947834 GAGGGATTGGTCATTGGTTAGTG 59.052 47.826 0.00 0.00 0.00 2.74
2055 2534 3.023832 GGGATTGGTCATTGGTTAGTGG 58.976 50.000 0.00 0.00 0.00 4.00
2056 2535 3.023832 GGATTGGTCATTGGTTAGTGGG 58.976 50.000 0.00 0.00 0.00 4.61
2057 2536 2.595750 TTGGTCATTGGTTAGTGGGG 57.404 50.000 0.00 0.00 0.00 4.96
2058 2537 1.451449 TGGTCATTGGTTAGTGGGGT 58.549 50.000 0.00 0.00 0.00 4.95
2059 2538 1.074727 TGGTCATTGGTTAGTGGGGTG 59.925 52.381 0.00 0.00 0.00 4.61
2060 2539 1.173913 GTCATTGGTTAGTGGGGTGC 58.826 55.000 0.00 0.00 0.00 5.01
2061 2540 0.774276 TCATTGGTTAGTGGGGTGCA 59.226 50.000 0.00 0.00 0.00 4.57
2062 2541 1.176527 CATTGGTTAGTGGGGTGCAG 58.823 55.000 0.00 0.00 0.00 4.41
2063 2542 0.777446 ATTGGTTAGTGGGGTGCAGT 59.223 50.000 0.00 0.00 0.00 4.40
2064 2543 0.109723 TTGGTTAGTGGGGTGCAGTC 59.890 55.000 0.00 0.00 0.00 3.51
2065 2544 1.002502 GGTTAGTGGGGTGCAGTCC 60.003 63.158 0.00 0.00 0.00 3.85
2066 2545 1.375523 GTTAGTGGGGTGCAGTCCG 60.376 63.158 0.00 0.00 0.00 4.79
2067 2546 1.839747 TTAGTGGGGTGCAGTCCGT 60.840 57.895 0.00 0.00 0.00 4.69
2068 2547 0.542467 TTAGTGGGGTGCAGTCCGTA 60.542 55.000 0.00 0.00 0.00 4.02
2069 2548 0.542467 TAGTGGGGTGCAGTCCGTAA 60.542 55.000 0.00 0.00 0.00 3.18
2070 2549 1.375523 GTGGGGTGCAGTCCGTAAG 60.376 63.158 0.00 0.00 0.00 2.34
2071 2550 1.534476 TGGGGTGCAGTCCGTAAGA 60.534 57.895 0.00 0.00 43.02 2.10
2072 2551 0.907704 TGGGGTGCAGTCCGTAAGAT 60.908 55.000 0.00 0.00 43.02 2.40
2073 2552 0.252197 GGGGTGCAGTCCGTAAGATT 59.748 55.000 0.00 0.00 43.02 2.40
2074 2553 1.653151 GGGTGCAGTCCGTAAGATTC 58.347 55.000 0.00 0.00 43.02 2.52
2075 2554 1.066430 GGGTGCAGTCCGTAAGATTCA 60.066 52.381 0.00 0.00 43.02 2.57
2076 2555 2.420129 GGGTGCAGTCCGTAAGATTCAT 60.420 50.000 0.00 0.00 43.02 2.57
2077 2556 3.181469 GGGTGCAGTCCGTAAGATTCATA 60.181 47.826 0.00 0.00 43.02 2.15
2078 2557 4.503296 GGGTGCAGTCCGTAAGATTCATAT 60.503 45.833 0.00 0.00 43.02 1.78
2079 2558 4.449068 GGTGCAGTCCGTAAGATTCATATG 59.551 45.833 0.00 0.00 43.02 1.78
2080 2559 5.050490 GTGCAGTCCGTAAGATTCATATGT 58.950 41.667 1.90 0.00 43.02 2.29
2081 2560 6.213677 GTGCAGTCCGTAAGATTCATATGTA 58.786 40.000 1.90 0.00 43.02 2.29
2082 2561 6.868864 GTGCAGTCCGTAAGATTCATATGTAT 59.131 38.462 1.90 0.00 43.02 2.29
2083 2562 8.027189 GTGCAGTCCGTAAGATTCATATGTATA 58.973 37.037 1.90 0.00 43.02 1.47
2084 2563 8.749354 TGCAGTCCGTAAGATTCATATGTATAT 58.251 33.333 1.90 0.00 43.02 0.86
2085 2564 9.587772 GCAGTCCGTAAGATTCATATGTATATT 57.412 33.333 7.27 7.27 43.02 1.28
2087 2566 9.587772 AGTCCGTAAGATTCATATGTATATTGC 57.412 33.333 11.21 9.26 43.02 3.56
2088 2567 8.818057 GTCCGTAAGATTCATATGTATATTGCC 58.182 37.037 11.21 3.11 43.02 4.52
2089 2568 7.985184 TCCGTAAGATTCATATGTATATTGCCC 59.015 37.037 11.21 1.20 43.02 5.36
2090 2569 7.042725 CCGTAAGATTCATATGTATATTGCCCG 60.043 40.741 11.21 10.09 43.02 6.13
2091 2570 7.491372 CGTAAGATTCATATGTATATTGCCCGT 59.509 37.037 11.21 0.00 43.02 5.28
2092 2571 9.811995 GTAAGATTCATATGTATATTGCCCGTA 57.188 33.333 11.21 0.00 0.00 4.02
2094 2573 8.948631 AGATTCATATGTATATTGCCCGTAAG 57.051 34.615 1.90 0.00 0.00 2.34
2095 2574 8.540388 AGATTCATATGTATATTGCCCGTAAGT 58.460 33.333 1.90 0.00 0.00 2.24
2096 2575 7.899178 TTCATATGTATATTGCCCGTAAGTG 57.101 36.000 1.90 0.00 0.00 3.16
2097 2576 6.999950 TCATATGTATATTGCCCGTAAGTGT 58.000 36.000 1.90 0.00 0.00 3.55
2098 2577 8.124808 TCATATGTATATTGCCCGTAAGTGTA 57.875 34.615 1.90 0.00 0.00 2.90
2099 2578 8.248253 TCATATGTATATTGCCCGTAAGTGTAG 58.752 37.037 1.90 0.00 0.00 2.74
2100 2579 4.624015 TGTATATTGCCCGTAAGTGTAGC 58.376 43.478 0.00 0.00 0.00 3.58
2101 2580 3.830744 ATATTGCCCGTAAGTGTAGCA 57.169 42.857 0.00 0.00 0.00 3.49
2102 2581 2.710096 ATTGCCCGTAAGTGTAGCAT 57.290 45.000 0.00 0.00 32.67 3.79
2103 2582 2.483014 TTGCCCGTAAGTGTAGCATT 57.517 45.000 0.00 0.00 32.67 3.56
2104 2583 2.483014 TGCCCGTAAGTGTAGCATTT 57.517 45.000 0.00 0.00 0.00 2.32
2105 2584 2.785562 TGCCCGTAAGTGTAGCATTTT 58.214 42.857 0.00 0.00 0.00 1.82
2106 2585 3.150767 TGCCCGTAAGTGTAGCATTTTT 58.849 40.909 0.00 0.00 0.00 1.94
2107 2586 3.057876 TGCCCGTAAGTGTAGCATTTTTG 60.058 43.478 0.00 0.00 0.00 2.44
2108 2587 3.189702 GCCCGTAAGTGTAGCATTTTTGA 59.810 43.478 0.00 0.00 0.00 2.69
2148 2627 3.201726 CGGAGGTGCATGTTAAAACAG 57.798 47.619 1.62 0.00 43.04 3.16
2188 2667 8.767478 ATTTATGGCAATTTCTTTCAAGTGAG 57.233 30.769 0.00 0.00 0.00 3.51
2190 2669 3.384146 TGGCAATTTCTTTCAAGTGAGCA 59.616 39.130 0.00 0.00 0.00 4.26
2260 2739 8.412456 TGTGTTTGTGAAGAAATTATCATGTGT 58.588 29.630 0.00 0.00 0.00 3.72
2266 2745 9.179552 TGTGAAGAAATTATCATGTGTTTTTCG 57.820 29.630 0.00 0.00 0.00 3.46
2295 2774 6.994868 TTTACCATACAAAACATTCGCAAC 57.005 33.333 0.00 0.00 0.00 4.17
2311 2790 1.888512 GCAACTGACATGTCCCACAAT 59.111 47.619 22.85 0.98 0.00 2.71
2313 2792 3.127548 GCAACTGACATGTCCCACAATAG 59.872 47.826 22.85 13.56 0.00 1.73
2316 2795 3.055094 ACTGACATGTCCCACAATAGACC 60.055 47.826 22.85 0.00 31.76 3.85
2326 2805 4.288626 TCCCACAATAGACCTTTGCTAGTT 59.711 41.667 0.00 0.00 0.00 2.24
2362 2841 1.881973 CAATTGCCATACTCCGATGGG 59.118 52.381 4.67 0.00 45.73 4.00
2370 2849 1.496060 TACTCCGATGGGCACAATCT 58.504 50.000 0.00 0.00 0.00 2.40
2516 2995 5.632959 GTTGGTATGCTTAACATTACGCAA 58.367 37.500 6.87 0.00 40.56 4.85
2538 3017 0.781278 CCCCAAACTTCCACCCCTAA 59.219 55.000 0.00 0.00 0.00 2.69
2542 3021 1.142936 AAACTTCCACCCCTAACCGT 58.857 50.000 0.00 0.00 0.00 4.83
2545 3024 0.909623 CTTCCACCCCTAACCGTCAT 59.090 55.000 0.00 0.00 0.00 3.06
2548 3027 0.326927 CCACCCCTAACCGTCATTGT 59.673 55.000 0.00 0.00 0.00 2.71
2554 3033 3.197116 CCCCTAACCGTCATTGTAAGAGT 59.803 47.826 0.00 0.00 0.00 3.24
2576 3055 5.866335 TGTTTCTACACTTCAACGTGTTT 57.134 34.783 1.66 0.00 45.27 2.83
2577 3056 6.243811 TGTTTCTACACTTCAACGTGTTTT 57.756 33.333 1.66 0.00 45.27 2.43
2578 3057 6.670233 TGTTTCTACACTTCAACGTGTTTTT 58.330 32.000 1.66 0.00 45.27 1.94
2600 3079 3.565764 TGGAAAGGCCATCATGACTAG 57.434 47.619 5.01 0.00 43.33 2.57
2601 3080 2.225467 GGAAAGGCCATCATGACTAGC 58.775 52.381 5.01 0.63 36.34 3.42
2602 3081 2.158696 GGAAAGGCCATCATGACTAGCT 60.159 50.000 5.01 0.00 36.34 3.32
2603 3082 3.549794 GAAAGGCCATCATGACTAGCTT 58.450 45.455 5.01 0.00 0.00 3.74
2604 3083 3.659183 AAGGCCATCATGACTAGCTTT 57.341 42.857 5.01 1.02 0.00 3.51
2605 3084 4.778213 AAGGCCATCATGACTAGCTTTA 57.222 40.909 5.01 0.00 0.00 1.85
2606 3085 4.989875 AGGCCATCATGACTAGCTTTAT 57.010 40.909 5.01 0.00 0.00 1.40
2607 3086 5.316158 AGGCCATCATGACTAGCTTTATT 57.684 39.130 5.01 0.00 0.00 1.40
2608 3087 5.068636 AGGCCATCATGACTAGCTTTATTG 58.931 41.667 5.01 0.00 0.00 1.90
2609 3088 4.217118 GGCCATCATGACTAGCTTTATTGG 59.783 45.833 0.00 0.00 0.00 3.16
2610 3089 4.320788 GCCATCATGACTAGCTTTATTGGC 60.321 45.833 12.43 12.43 39.11 4.52
2611 3090 5.068636 CCATCATGACTAGCTTTATTGGCT 58.931 41.667 0.00 0.00 43.02 4.75
2612 3091 5.533903 CCATCATGACTAGCTTTATTGGCTT 59.466 40.000 0.00 0.00 40.74 4.35
2613 3092 6.712095 CCATCATGACTAGCTTTATTGGCTTA 59.288 38.462 0.00 0.00 40.74 3.09
2614 3093 7.229306 CCATCATGACTAGCTTTATTGGCTTAA 59.771 37.037 0.00 0.00 40.74 1.85
2615 3094 8.623903 CATCATGACTAGCTTTATTGGCTTAAA 58.376 33.333 0.00 0.00 40.74 1.52
2616 3095 8.574251 TCATGACTAGCTTTATTGGCTTAAAA 57.426 30.769 0.00 0.00 40.74 1.52
2617 3096 9.019656 TCATGACTAGCTTTATTGGCTTAAAAA 57.980 29.630 0.00 0.00 40.74 1.94
2618 3097 9.294030 CATGACTAGCTTTATTGGCTTAAAAAG 57.706 33.333 0.00 0.00 40.74 2.27
2619 3098 7.826690 TGACTAGCTTTATTGGCTTAAAAAGG 58.173 34.615 0.00 0.00 40.74 3.11
2620 3099 7.668052 TGACTAGCTTTATTGGCTTAAAAAGGA 59.332 33.333 0.00 0.00 40.74 3.36
2621 3100 8.417273 ACTAGCTTTATTGGCTTAAAAAGGAA 57.583 30.769 0.00 0.00 40.74 3.36
2622 3101 9.035890 ACTAGCTTTATTGGCTTAAAAAGGAAT 57.964 29.630 0.00 0.00 40.74 3.01
2623 3102 9.875691 CTAGCTTTATTGGCTTAAAAAGGAATT 57.124 29.630 0.00 0.00 40.74 2.17
2625 3104 9.653287 AGCTTTATTGGCTTAAAAAGGAATTAC 57.347 29.630 0.00 0.00 36.56 1.89
2626 3105 9.430623 GCTTTATTGGCTTAAAAAGGAATTACA 57.569 29.630 0.00 0.00 31.16 2.41
2631 3110 8.825667 TTGGCTTAAAAAGGAATTACATTGTC 57.174 30.769 0.00 0.00 0.00 3.18
2632 3111 7.382898 TGGCTTAAAAAGGAATTACATTGTCC 58.617 34.615 0.00 0.00 0.00 4.02
2633 3112 7.015682 TGGCTTAAAAAGGAATTACATTGTCCA 59.984 33.333 0.00 0.00 33.57 4.02
2634 3113 7.330946 GGCTTAAAAAGGAATTACATTGTCCAC 59.669 37.037 0.00 0.00 33.57 4.02
2635 3114 7.870445 GCTTAAAAAGGAATTACATTGTCCACA 59.130 33.333 0.00 0.00 33.57 4.17
2636 3115 9.757227 CTTAAAAAGGAATTACATTGTCCACAA 57.243 29.630 0.00 0.00 40.51 3.33
2637 3116 9.757227 TTAAAAAGGAATTACATTGTCCACAAG 57.243 29.630 0.00 0.00 39.47 3.16
2638 3117 5.982890 AAGGAATTACATTGTCCACAAGG 57.017 39.130 2.62 2.62 42.66 3.61
2646 3125 4.228912 CATTGTCCACAAGGTTTGAGAC 57.771 45.455 0.00 3.48 39.47 3.36
2656 3135 2.934083 GTTTGAGACCAGACAGCCC 58.066 57.895 0.00 0.00 0.00 5.19
2657 3136 0.951040 GTTTGAGACCAGACAGCCCG 60.951 60.000 0.00 0.00 0.00 6.13
2658 3137 1.118965 TTTGAGACCAGACAGCCCGA 61.119 55.000 0.00 0.00 0.00 5.14
2659 3138 1.118965 TTGAGACCAGACAGCCCGAA 61.119 55.000 0.00 0.00 0.00 4.30
2660 3139 1.216710 GAGACCAGACAGCCCGAAG 59.783 63.158 0.00 0.00 0.00 3.79
2672 3151 4.493747 CCGAAGGCTCGTCCGTCC 62.494 72.222 0.00 0.00 46.14 4.79
2673 3152 3.744719 CGAAGGCTCGTCCGTCCA 61.745 66.667 0.00 0.00 39.78 4.02
2674 3153 2.654877 GAAGGCTCGTCCGTCCAA 59.345 61.111 0.00 0.00 37.37 3.53
2675 3154 1.005394 GAAGGCTCGTCCGTCCAAA 60.005 57.895 0.00 0.00 37.37 3.28
2676 3155 0.391263 GAAGGCTCGTCCGTCCAAAT 60.391 55.000 0.00 0.00 37.37 2.32
2677 3156 0.673644 AAGGCTCGTCCGTCCAAATG 60.674 55.000 0.00 0.00 40.77 2.32
2678 3157 2.750888 GGCTCGTCCGTCCAAATGC 61.751 63.158 0.00 0.00 0.00 3.56
2679 3158 1.741770 GCTCGTCCGTCCAAATGCT 60.742 57.895 0.00 0.00 0.00 3.79
2680 3159 0.459585 GCTCGTCCGTCCAAATGCTA 60.460 55.000 0.00 0.00 0.00 3.49
2681 3160 1.560923 CTCGTCCGTCCAAATGCTAG 58.439 55.000 0.00 0.00 0.00 3.42
2682 3161 1.134367 CTCGTCCGTCCAAATGCTAGA 59.866 52.381 0.00 0.00 0.00 2.43
2683 3162 1.134367 TCGTCCGTCCAAATGCTAGAG 59.866 52.381 0.00 0.00 0.00 2.43
2684 3163 1.134367 CGTCCGTCCAAATGCTAGAGA 59.866 52.381 0.00 0.00 0.00 3.10
2685 3164 2.416836 CGTCCGTCCAAATGCTAGAGAA 60.417 50.000 0.00 0.00 0.00 2.87
2686 3165 3.738281 CGTCCGTCCAAATGCTAGAGAAT 60.738 47.826 0.00 0.00 0.00 2.40
2687 3166 4.192317 GTCCGTCCAAATGCTAGAGAATT 58.808 43.478 0.00 0.00 0.00 2.17
2688 3167 4.636206 GTCCGTCCAAATGCTAGAGAATTT 59.364 41.667 0.00 0.00 33.64 1.82
2689 3168 5.815740 GTCCGTCCAAATGCTAGAGAATTTA 59.184 40.000 0.00 0.00 31.67 1.40
2690 3169 6.483640 GTCCGTCCAAATGCTAGAGAATTTAT 59.516 38.462 0.00 0.00 31.67 1.40
2691 3170 7.012421 GTCCGTCCAAATGCTAGAGAATTTATT 59.988 37.037 0.00 0.00 31.67 1.40
2692 3171 8.208224 TCCGTCCAAATGCTAGAGAATTTATTA 58.792 33.333 0.00 0.00 31.67 0.98
2693 3172 8.283291 CCGTCCAAATGCTAGAGAATTTATTAC 58.717 37.037 0.00 0.00 31.67 1.89
2694 3173 8.826710 CGTCCAAATGCTAGAGAATTTATTACA 58.173 33.333 0.00 0.00 31.67 2.41
2716 3195 9.878667 TTACAATAACTATGTTTAGCTAGCACA 57.121 29.630 18.83 13.20 32.27 4.57
2717 3196 8.964476 ACAATAACTATGTTTAGCTAGCACAT 57.036 30.769 18.83 19.23 35.33 3.21
2718 3197 8.830580 ACAATAACTATGTTTAGCTAGCACATG 58.169 33.333 22.77 16.43 33.19 3.21
2719 3198 5.741388 AACTATGTTTAGCTAGCACATGC 57.259 39.130 22.77 8.78 42.49 4.06
2729 3208 2.408835 GCACATGCGCCGCTTTAT 59.591 55.556 11.67 0.00 0.00 1.40
2730 3209 1.226660 GCACATGCGCCGCTTTATT 60.227 52.632 11.67 0.00 0.00 1.40
2731 3210 0.801836 GCACATGCGCCGCTTTATTT 60.802 50.000 11.67 0.00 0.00 1.40
2732 3211 0.915904 CACATGCGCCGCTTTATTTG 59.084 50.000 11.67 0.00 0.00 2.32
2733 3212 0.801836 ACATGCGCCGCTTTATTTGC 60.802 50.000 11.67 0.00 0.00 3.68
2734 3213 0.801451 CATGCGCCGCTTTATTTGCA 60.801 50.000 11.67 0.00 36.69 4.08
2735 3214 0.102844 ATGCGCCGCTTTATTTGCAT 59.897 45.000 11.67 0.00 38.16 3.96
2736 3215 0.108898 TGCGCCGCTTTATTTGCATT 60.109 45.000 11.67 0.00 0.00 3.56
2737 3216 1.133216 TGCGCCGCTTTATTTGCATTA 59.867 42.857 11.67 0.00 0.00 1.90
2738 3217 1.516864 GCGCCGCTTTATTTGCATTAC 59.483 47.619 0.00 0.00 0.00 1.89
2739 3218 1.772966 CGCCGCTTTATTTGCATTACG 59.227 47.619 0.00 0.00 0.00 3.18
2740 3219 2.537931 CGCCGCTTTATTTGCATTACGA 60.538 45.455 0.00 0.00 0.00 3.43
2741 3220 3.035942 GCCGCTTTATTTGCATTACGAG 58.964 45.455 0.00 0.00 0.00 4.18
2742 3221 3.617669 CCGCTTTATTTGCATTACGAGG 58.382 45.455 0.00 0.00 0.00 4.63
2743 3222 3.311322 CCGCTTTATTTGCATTACGAGGA 59.689 43.478 0.00 0.00 0.00 3.71
2744 3223 4.271687 CGCTTTATTTGCATTACGAGGAC 58.728 43.478 0.00 0.00 0.00 3.85
2745 3224 4.201773 CGCTTTATTTGCATTACGAGGACA 60.202 41.667 0.00 0.00 0.00 4.02
2746 3225 5.636837 GCTTTATTTGCATTACGAGGACAA 58.363 37.500 0.00 0.00 0.00 3.18
2747 3226 6.265577 GCTTTATTTGCATTACGAGGACAAT 58.734 36.000 0.00 0.00 0.00 2.71
2748 3227 6.197096 GCTTTATTTGCATTACGAGGACAATG 59.803 38.462 0.00 0.00 35.64 2.82
2758 3237 8.107591 CATTACGAGGACAATGCTTAAATTTG 57.892 34.615 0.00 0.00 0.00 2.32
2759 3238 5.957842 ACGAGGACAATGCTTAAATTTGA 57.042 34.783 0.00 0.00 0.00 2.69
2760 3239 5.699839 ACGAGGACAATGCTTAAATTTGAC 58.300 37.500 0.00 0.00 0.00 3.18
2761 3240 5.095490 CGAGGACAATGCTTAAATTTGACC 58.905 41.667 0.00 0.00 36.06 4.02
2762 3241 5.106157 CGAGGACAATGCTTAAATTTGACCT 60.106 40.000 12.28 12.28 44.39 3.85
2763 3242 6.570378 CGAGGACAATGCTTAAATTTGACCTT 60.570 38.462 0.00 3.20 42.69 3.50
2764 3243 6.691508 AGGACAATGCTTAAATTTGACCTTC 58.308 36.000 0.00 0.00 40.83 3.46
2765 3244 5.869344 GGACAATGCTTAAATTTGACCTTCC 59.131 40.000 0.00 0.00 34.01 3.46
2766 3245 5.793817 ACAATGCTTAAATTTGACCTTCCC 58.206 37.500 0.00 0.00 0.00 3.97
2767 3246 5.306678 ACAATGCTTAAATTTGACCTTCCCA 59.693 36.000 0.00 0.00 0.00 4.37
2768 3247 6.183361 ACAATGCTTAAATTTGACCTTCCCAA 60.183 34.615 0.00 0.00 0.00 4.12
2769 3248 6.625532 ATGCTTAAATTTGACCTTCCCAAT 57.374 33.333 0.00 0.00 0.00 3.16
2770 3249 6.036577 TGCTTAAATTTGACCTTCCCAATC 57.963 37.500 0.00 0.00 0.00 2.67
2771 3250 5.541868 TGCTTAAATTTGACCTTCCCAATCA 59.458 36.000 0.00 0.00 0.00 2.57
2772 3251 6.042552 TGCTTAAATTTGACCTTCCCAATCAA 59.957 34.615 0.00 0.00 0.00 2.57
2773 3252 6.934083 GCTTAAATTTGACCTTCCCAATCAAA 59.066 34.615 0.00 1.49 44.18 2.69
2774 3253 7.118245 GCTTAAATTTGACCTTCCCAATCAAAG 59.882 37.037 0.00 0.00 43.52 2.77
2775 3254 6.499106 AAATTTGACCTTCCCAATCAAAGT 57.501 33.333 5.07 0.00 43.52 2.66
2776 3255 5.728637 ATTTGACCTTCCCAATCAAAGTC 57.271 39.130 5.07 0.00 43.52 3.01
2777 3256 2.778299 TGACCTTCCCAATCAAAGTCG 58.222 47.619 0.00 0.00 0.00 4.18
2778 3257 2.370519 TGACCTTCCCAATCAAAGTCGA 59.629 45.455 0.00 0.00 0.00 4.20
2779 3258 3.181449 TGACCTTCCCAATCAAAGTCGAA 60.181 43.478 0.00 0.00 0.00 3.71
2780 3259 3.818773 GACCTTCCCAATCAAAGTCGAAA 59.181 43.478 0.00 0.00 0.00 3.46
2781 3260 3.568430 ACCTTCCCAATCAAAGTCGAAAC 59.432 43.478 0.00 0.00 0.00 2.78
2782 3261 3.568007 CCTTCCCAATCAAAGTCGAAACA 59.432 43.478 0.00 0.00 0.00 2.83
2783 3262 4.218417 CCTTCCCAATCAAAGTCGAAACAT 59.782 41.667 0.00 0.00 0.00 2.71
2784 3263 5.371115 TTCCCAATCAAAGTCGAAACATC 57.629 39.130 0.00 0.00 0.00 3.06
2785 3264 3.435327 TCCCAATCAAAGTCGAAACATCG 59.565 43.478 0.00 0.00 0.00 3.84
2786 3265 3.435327 CCCAATCAAAGTCGAAACATCGA 59.565 43.478 0.00 0.00 40.06 3.59
2792 3271 4.957266 TCGAAACATCGACACGCT 57.043 50.000 0.00 0.00 37.20 5.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.047274 TACTTGGCAGCGGAGTGC 60.047 61.111 9.03 0.00 46.98 4.40
7 8 0.737715 GAGTACTTGGCAGCGGAGTG 60.738 60.000 0.00 0.00 0.00 3.51
8 9 1.592223 GAGTACTTGGCAGCGGAGT 59.408 57.895 0.00 4.85 0.00 3.85
9 10 1.153549 GGAGTACTTGGCAGCGGAG 60.154 63.158 0.00 0.00 0.00 4.63
10 11 1.192146 AAGGAGTACTTGGCAGCGGA 61.192 55.000 0.00 0.00 38.21 5.54
11 12 0.741221 GAAGGAGTACTTGGCAGCGG 60.741 60.000 0.00 0.00 40.21 5.52
12 13 0.247736 AGAAGGAGTACTTGGCAGCG 59.752 55.000 0.00 0.00 40.21 5.18
13 14 3.611766 TTAGAAGGAGTACTTGGCAGC 57.388 47.619 0.00 0.00 40.21 5.25
27 28 4.332819 CGGTAGCATGGTTTCCTTTAGAAG 59.667 45.833 1.12 0.00 35.40 2.85
28 29 4.258543 CGGTAGCATGGTTTCCTTTAGAA 58.741 43.478 1.12 0.00 0.00 2.10
29 30 3.869065 CGGTAGCATGGTTTCCTTTAGA 58.131 45.455 1.12 0.00 0.00 2.10
30 31 2.354821 GCGGTAGCATGGTTTCCTTTAG 59.645 50.000 1.12 0.00 44.35 1.85
31 32 2.361789 GCGGTAGCATGGTTTCCTTTA 58.638 47.619 1.12 0.00 44.35 1.85
32 33 1.173913 GCGGTAGCATGGTTTCCTTT 58.826 50.000 1.12 0.00 44.35 3.11
33 34 2.868253 GCGGTAGCATGGTTTCCTT 58.132 52.632 1.12 0.00 44.35 3.36
34 35 4.637771 GCGGTAGCATGGTTTCCT 57.362 55.556 1.12 0.00 44.35 3.36
44 45 2.584391 CCCTATCCCTGGCGGTAGC 61.584 68.421 0.00 0.00 44.18 3.58
45 46 1.913762 CCCCTATCCCTGGCGGTAG 60.914 68.421 0.00 0.00 0.00 3.18
46 47 2.203182 CCCCTATCCCTGGCGGTA 59.797 66.667 0.00 0.00 0.00 4.02
86 87 3.289834 GTGCAGTGCAGGTGGTGG 61.290 66.667 20.42 0.00 40.08 4.61
87 88 3.653009 CGTGCAGTGCAGGTGGTG 61.653 66.667 25.87 6.36 40.08 4.17
88 89 4.935495 CCGTGCAGTGCAGGTGGT 62.935 66.667 29.99 0.00 41.98 4.16
93 94 3.730761 GAAGCCCGTGCAGTGCAG 61.731 66.667 20.42 12.53 40.08 4.41
112 113 1.303236 TTCCATTGCCACTGTCGGG 60.303 57.895 0.00 0.00 0.00 5.14
113 114 1.308069 CCTTCCATTGCCACTGTCGG 61.308 60.000 0.00 0.00 0.00 4.79
114 115 1.308069 CCCTTCCATTGCCACTGTCG 61.308 60.000 0.00 0.00 0.00 4.35
115 116 0.967380 CCCCTTCCATTGCCACTGTC 60.967 60.000 0.00 0.00 0.00 3.51
116 117 1.077265 CCCCTTCCATTGCCACTGT 59.923 57.895 0.00 0.00 0.00 3.55
117 118 1.683365 CCCCCTTCCATTGCCACTG 60.683 63.158 0.00 0.00 0.00 3.66
118 119 2.772924 CCCCCTTCCATTGCCACT 59.227 61.111 0.00 0.00 0.00 4.00
155 156 1.900337 CGAAGGAACCCTAACTCCCCT 60.900 57.143 0.00 0.00 31.13 4.79
156 157 0.540454 CGAAGGAACCCTAACTCCCC 59.460 60.000 0.00 0.00 31.13 4.81
172 173 1.731433 CCTTCCCGAGGCGATACGAA 61.731 60.000 0.00 0.00 39.09 3.85
173 174 2.191513 CCTTCCCGAGGCGATACGA 61.192 63.158 0.00 0.00 39.09 3.43
177 178 1.155390 TATCCCTTCCCGAGGCGAT 59.845 57.895 0.00 0.00 44.85 4.58
206 207 2.093447 AGATGGTGCTAGAAAACTCCCG 60.093 50.000 0.00 0.00 0.00 5.14
209 210 5.482908 TCTGAAGATGGTGCTAGAAAACTC 58.517 41.667 0.00 0.00 0.00 3.01
210 211 5.489792 TCTGAAGATGGTGCTAGAAAACT 57.510 39.130 0.00 0.00 0.00 2.66
211 212 6.116680 CATCTGAAGATGGTGCTAGAAAAC 57.883 41.667 11.76 0.00 46.09 2.43
225 227 2.279741 GCGGTATTGCACATCTGAAGA 58.720 47.619 0.00 0.00 34.15 2.87
243 245 6.708054 AGAATATTAGATTGAGAAGGGTTGCG 59.292 38.462 0.00 0.00 0.00 4.85
245 247 9.844257 AGAAGAATATTAGATTGAGAAGGGTTG 57.156 33.333 0.00 0.00 0.00 3.77
274 276 7.751047 TGCAGAACTACATAACGAATTAGAC 57.249 36.000 0.00 0.00 0.00 2.59
275 277 8.766000 TTTGCAGAACTACATAACGAATTAGA 57.234 30.769 0.00 0.00 0.00 2.10
276 278 8.656849 ACTTTGCAGAACTACATAACGAATTAG 58.343 33.333 0.00 0.00 0.00 1.73
277 279 8.440059 CACTTTGCAGAACTACATAACGAATTA 58.560 33.333 0.00 0.00 0.00 1.40
282 284 5.668866 GCTCACTTTGCAGAACTACATAACG 60.669 44.000 0.00 0.00 0.00 3.18
286 288 2.738846 CGCTCACTTTGCAGAACTACAT 59.261 45.455 0.00 0.00 0.00 2.29
289 291 2.526304 ACGCTCACTTTGCAGAACTA 57.474 45.000 0.00 0.00 0.00 2.24
296 298 1.726853 ACCATCTACGCTCACTTTGC 58.273 50.000 0.00 0.00 0.00 3.68
298 300 3.514309 ACCTAACCATCTACGCTCACTTT 59.486 43.478 0.00 0.00 0.00 2.66
301 303 3.521947 AACCTAACCATCTACGCTCAC 57.478 47.619 0.00 0.00 0.00 3.51
302 304 5.864418 ATAAACCTAACCATCTACGCTCA 57.136 39.130 0.00 0.00 0.00 4.26
303 305 9.918630 TTATAATAAACCTAACCATCTACGCTC 57.081 33.333 0.00 0.00 0.00 5.03
357 359 7.852945 GTCGCCAAATGTCTGAATAAATCTAAG 59.147 37.037 0.00 0.00 0.00 2.18
360 362 5.220662 CGTCGCCAAATGTCTGAATAAATCT 60.221 40.000 0.00 0.00 0.00 2.40
362 364 4.394920 ACGTCGCCAAATGTCTGAATAAAT 59.605 37.500 0.00 0.00 0.00 1.40
363 365 3.749088 ACGTCGCCAAATGTCTGAATAAA 59.251 39.130 0.00 0.00 0.00 1.40
366 368 1.808411 ACGTCGCCAAATGTCTGAAT 58.192 45.000 0.00 0.00 0.00 2.57
371 375 0.584396 TGTGAACGTCGCCAAATGTC 59.416 50.000 0.00 0.00 0.00 3.06
382 388 3.244078 TGGCTTCTAGTCAATGTGAACGT 60.244 43.478 0.00 0.00 0.00 3.99
387 393 5.885230 TTCAATGGCTTCTAGTCAATGTG 57.115 39.130 0.00 0.00 32.79 3.21
412 419 6.450545 CGAGCAAATCTAGGATACATCTTGA 58.549 40.000 0.00 0.00 41.41 3.02
438 462 1.789523 TCACCCCTCCCTTATCGAAG 58.210 55.000 0.00 0.00 0.00 3.79
444 468 2.961536 TCATCTTCACCCCTCCCTTA 57.038 50.000 0.00 0.00 0.00 2.69
445 469 1.849039 CATCATCTTCACCCCTCCCTT 59.151 52.381 0.00 0.00 0.00 3.95
449 473 0.533755 CGCCATCATCTTCACCCCTC 60.534 60.000 0.00 0.00 0.00 4.30
453 477 0.749454 AAGGCGCCATCATCTTCACC 60.749 55.000 31.54 0.00 0.00 4.02
455 479 0.252761 TGAAGGCGCCATCATCTTCA 59.747 50.000 29.31 23.82 41.96 3.02
458 482 1.525535 GCTGAAGGCGCCATCATCT 60.526 57.895 32.36 6.27 0.00 2.90
482 508 2.579207 ACGATGACTACAATCACCGG 57.421 50.000 0.00 0.00 0.00 5.28
484 510 5.291128 CCAACTAACGATGACTACAATCACC 59.709 44.000 0.00 0.00 0.00 4.02
487 513 6.331061 AGACCAACTAACGATGACTACAATC 58.669 40.000 0.00 0.00 0.00 2.67
488 514 6.282199 AGACCAACTAACGATGACTACAAT 57.718 37.500 0.00 0.00 0.00 2.71
491 517 6.039047 TCCATAGACCAACTAACGATGACTAC 59.961 42.308 0.00 0.00 34.56 2.73
537 563 9.476928 ACTGTCTATGTAGTATAAAGAACACCT 57.523 33.333 0.00 0.00 0.00 4.00
618 644 6.533723 TGTCACCAGAACGACAAATCATATAC 59.466 38.462 0.00 0.00 39.14 1.47
625 651 3.476552 ACATGTCACCAGAACGACAAAT 58.523 40.909 0.00 0.00 44.78 2.32
642 853 3.688185 CAGAGTGGATTTGACTGGACATG 59.312 47.826 0.00 0.00 0.00 3.21
701 1150 2.279186 GTGGTTGTTGGGCGTTGC 60.279 61.111 0.00 0.00 0.00 4.17
736 1185 3.443681 AGAATAACCAAATTGGACCAGCG 59.556 43.478 20.25 0.00 40.96 5.18
816 1268 2.369394 GTCGGATCCAGCCATCTTTTT 58.631 47.619 13.41 0.00 0.00 1.94
817 1269 1.743772 CGTCGGATCCAGCCATCTTTT 60.744 52.381 13.41 0.00 0.00 2.27
818 1270 0.179073 CGTCGGATCCAGCCATCTTT 60.179 55.000 13.41 0.00 0.00 2.52
855 1307 2.278013 GAGACCGATCGACGCCAC 60.278 66.667 18.66 1.13 41.07 5.01
891 1343 0.514691 GAGCAGCAAGGTTCTGAACG 59.485 55.000 13.89 2.39 33.54 3.95
895 1347 0.035881 TCTGGAGCAGCAAGGTTCTG 59.964 55.000 0.00 0.00 34.79 3.02
896 1348 0.767375 TTCTGGAGCAGCAAGGTTCT 59.233 50.000 0.00 0.00 0.00 3.01
900 1352 0.035881 TGTCTTCTGGAGCAGCAAGG 59.964 55.000 0.00 0.00 0.00 3.61
997 1475 4.129737 CACCGGCTCCGACATCGT 62.130 66.667 10.28 0.00 42.83 3.73
1149 1627 0.811616 GCACGGGCATCTTCCTGTAG 60.812 60.000 3.77 0.00 43.61 2.74
1154 1632 3.512516 GCAGCACGGGCATCTTCC 61.513 66.667 14.57 0.00 44.61 3.46
1210 1688 1.662845 GCTTCGTCGACGTACTGCAC 61.663 60.000 34.40 15.87 40.80 4.57
1254 1732 4.064768 TAGGGGTCGGCCGGAAGA 62.065 66.667 27.83 1.61 34.97 2.87
1353 1831 6.360329 CAGAACAGTAAAATAACTCGCGTTT 58.640 36.000 5.77 3.21 34.59 3.60
1397 1875 1.301716 GCTGCAACCTCTCGGAACA 60.302 57.895 0.00 0.00 0.00 3.18
1436 1914 1.360551 CGCCGACCATACCTCTCAG 59.639 63.158 0.00 0.00 0.00 3.35
1539 2017 0.179081 GTCATCCCCACCGAAGTAGC 60.179 60.000 0.00 0.00 0.00 3.58
1820 2299 2.922234 CCTTGGAGCTGGATCCCC 59.078 66.667 9.90 3.28 38.72 4.81
1821 2300 2.194326 GCCTTGGAGCTGGATCCC 59.806 66.667 9.90 0.00 38.72 3.85
1905 2384 9.798885 CTAGCAAAGTTCGCTGAATAATATTAC 57.201 33.333 0.00 0.00 40.73 1.89
1906 2385 9.758651 TCTAGCAAAGTTCGCTGAATAATATTA 57.241 29.630 0.00 0.00 40.73 0.98
1907 2386 8.552034 GTCTAGCAAAGTTCGCTGAATAATATT 58.448 33.333 0.00 0.00 40.73 1.28
1908 2387 7.928706 AGTCTAGCAAAGTTCGCTGAATAATAT 59.071 33.333 0.00 0.00 40.73 1.28
1909 2388 7.265673 AGTCTAGCAAAGTTCGCTGAATAATA 58.734 34.615 0.00 0.00 40.73 0.98
1910 2389 6.109359 AGTCTAGCAAAGTTCGCTGAATAAT 58.891 36.000 0.00 0.00 40.73 1.28
1911 2390 5.479306 AGTCTAGCAAAGTTCGCTGAATAA 58.521 37.500 0.00 0.00 40.73 1.40
1912 2391 5.073311 AGTCTAGCAAAGTTCGCTGAATA 57.927 39.130 0.00 0.00 40.73 1.75
1913 2392 3.931578 AGTCTAGCAAAGTTCGCTGAAT 58.068 40.909 0.00 0.00 40.73 2.57
1914 2393 3.386768 AGTCTAGCAAAGTTCGCTGAA 57.613 42.857 0.00 0.00 40.73 3.02
1915 2394 3.386768 AAGTCTAGCAAAGTTCGCTGA 57.613 42.857 0.00 0.00 40.73 4.26
1916 2395 3.987868 TGTAAGTCTAGCAAAGTTCGCTG 59.012 43.478 0.00 0.00 40.73 5.18
1917 2396 4.022242 TCTGTAAGTCTAGCAAAGTTCGCT 60.022 41.667 0.00 0.00 38.27 4.93
1918 2397 4.090210 GTCTGTAAGTCTAGCAAAGTTCGC 59.910 45.833 0.00 0.00 33.76 4.70
1919 2398 4.321217 CGTCTGTAAGTCTAGCAAAGTTCG 59.679 45.833 0.00 0.00 33.76 3.95
1920 2399 4.090210 GCGTCTGTAAGTCTAGCAAAGTTC 59.910 45.833 0.00 0.00 33.76 3.01
1921 2400 3.988517 GCGTCTGTAAGTCTAGCAAAGTT 59.011 43.478 0.00 0.00 33.76 2.66
1922 2401 3.005472 TGCGTCTGTAAGTCTAGCAAAGT 59.995 43.478 0.00 0.00 33.76 2.66
1923 2402 3.575630 TGCGTCTGTAAGTCTAGCAAAG 58.424 45.455 0.00 0.00 33.76 2.77
1924 2403 3.653539 TGCGTCTGTAAGTCTAGCAAA 57.346 42.857 0.00 0.00 33.76 3.68
1925 2404 3.575630 CTTGCGTCTGTAAGTCTAGCAA 58.424 45.455 0.14 0.14 37.48 3.91
1926 2405 2.671351 GCTTGCGTCTGTAAGTCTAGCA 60.671 50.000 0.00 0.00 39.69 3.49
1927 2406 1.921230 GCTTGCGTCTGTAAGTCTAGC 59.079 52.381 0.00 0.00 39.69 3.42
1928 2407 2.094700 TGGCTTGCGTCTGTAAGTCTAG 60.095 50.000 0.00 0.00 42.18 2.43
1929 2408 1.890489 TGGCTTGCGTCTGTAAGTCTA 59.110 47.619 0.00 0.00 42.18 2.59
1930 2409 0.679505 TGGCTTGCGTCTGTAAGTCT 59.320 50.000 0.00 0.00 42.18 3.24
1931 2410 0.790814 GTGGCTTGCGTCTGTAAGTC 59.209 55.000 0.00 0.00 42.05 3.01
1932 2411 0.944311 CGTGGCTTGCGTCTGTAAGT 60.944 55.000 0.00 0.00 39.69 2.24
1933 2412 1.626654 CCGTGGCTTGCGTCTGTAAG 61.627 60.000 0.00 0.00 40.39 2.34
1934 2413 1.666553 CCGTGGCTTGCGTCTGTAA 60.667 57.895 0.00 0.00 0.00 2.41
1935 2414 2.048597 CCGTGGCTTGCGTCTGTA 60.049 61.111 0.00 0.00 0.00 2.74
1936 2415 2.933878 TTTCCGTGGCTTGCGTCTGT 62.934 55.000 0.00 0.00 0.00 3.41
1937 2416 1.577328 ATTTCCGTGGCTTGCGTCTG 61.577 55.000 0.00 0.00 0.00 3.51
1938 2417 0.889186 AATTTCCGTGGCTTGCGTCT 60.889 50.000 0.00 0.00 0.00 4.18
1939 2418 0.800012 TAATTTCCGTGGCTTGCGTC 59.200 50.000 0.00 0.00 0.00 5.19
1940 2419 1.459450 ATAATTTCCGTGGCTTGCGT 58.541 45.000 0.00 0.00 0.00 5.24
1941 2420 2.559998 AATAATTTCCGTGGCTTGCG 57.440 45.000 0.00 0.00 0.00 4.85
1942 2421 3.789224 CGTAAATAATTTCCGTGGCTTGC 59.211 43.478 0.00 0.00 0.00 4.01
1943 2422 4.095185 TCCGTAAATAATTTCCGTGGCTTG 59.905 41.667 0.00 0.00 0.00 4.01
1944 2423 4.095334 GTCCGTAAATAATTTCCGTGGCTT 59.905 41.667 0.00 0.00 0.00 4.35
1945 2424 3.624410 GTCCGTAAATAATTTCCGTGGCT 59.376 43.478 0.00 0.00 0.00 4.75
1946 2425 3.624410 AGTCCGTAAATAATTTCCGTGGC 59.376 43.478 0.00 0.00 0.00 5.01
1947 2426 4.871557 TCAGTCCGTAAATAATTTCCGTGG 59.128 41.667 0.00 0.00 0.00 4.94
1948 2427 5.501897 GCTCAGTCCGTAAATAATTTCCGTG 60.502 44.000 0.00 0.00 0.00 4.94
1949 2428 4.569564 GCTCAGTCCGTAAATAATTTCCGT 59.430 41.667 0.00 0.00 0.00 4.69
1950 2429 4.809426 AGCTCAGTCCGTAAATAATTTCCG 59.191 41.667 0.00 0.00 0.00 4.30
1951 2430 5.007724 CCAGCTCAGTCCGTAAATAATTTCC 59.992 44.000 0.00 0.00 0.00 3.13
1952 2431 5.815740 TCCAGCTCAGTCCGTAAATAATTTC 59.184 40.000 0.00 0.00 0.00 2.17
1953 2432 5.585047 GTCCAGCTCAGTCCGTAAATAATTT 59.415 40.000 0.00 0.00 0.00 1.82
1954 2433 5.116882 GTCCAGCTCAGTCCGTAAATAATT 58.883 41.667 0.00 0.00 0.00 1.40
1955 2434 4.161565 TGTCCAGCTCAGTCCGTAAATAAT 59.838 41.667 0.00 0.00 0.00 1.28
1956 2435 3.512329 TGTCCAGCTCAGTCCGTAAATAA 59.488 43.478 0.00 0.00 0.00 1.40
1957 2436 3.093814 TGTCCAGCTCAGTCCGTAAATA 58.906 45.455 0.00 0.00 0.00 1.40
1958 2437 1.899814 TGTCCAGCTCAGTCCGTAAAT 59.100 47.619 0.00 0.00 0.00 1.40
1959 2438 1.334160 TGTCCAGCTCAGTCCGTAAA 58.666 50.000 0.00 0.00 0.00 2.01
1960 2439 1.204704 CATGTCCAGCTCAGTCCGTAA 59.795 52.381 0.00 0.00 0.00 3.18
1961 2440 0.817654 CATGTCCAGCTCAGTCCGTA 59.182 55.000 0.00 0.00 0.00 4.02
1962 2441 1.188219 ACATGTCCAGCTCAGTCCGT 61.188 55.000 0.00 0.00 0.00 4.69
1963 2442 0.036952 AACATGTCCAGCTCAGTCCG 60.037 55.000 0.00 0.00 0.00 4.79
1964 2443 2.191128 AAACATGTCCAGCTCAGTCC 57.809 50.000 0.00 0.00 0.00 3.85
1965 2444 4.153117 CAGTTAAACATGTCCAGCTCAGTC 59.847 45.833 0.00 0.00 0.00 3.51
1966 2445 4.067896 CAGTTAAACATGTCCAGCTCAGT 58.932 43.478 0.00 0.00 0.00 3.41
1967 2446 3.438087 CCAGTTAAACATGTCCAGCTCAG 59.562 47.826 0.00 0.00 0.00 3.35
1968 2447 3.072330 TCCAGTTAAACATGTCCAGCTCA 59.928 43.478 0.00 0.00 0.00 4.26
1969 2448 3.674997 TCCAGTTAAACATGTCCAGCTC 58.325 45.455 0.00 0.00 0.00 4.09
1970 2449 3.788227 TCCAGTTAAACATGTCCAGCT 57.212 42.857 0.00 0.00 0.00 4.24
1971 2450 4.278419 AGTTTCCAGTTAAACATGTCCAGC 59.722 41.667 0.00 0.00 40.97 4.85
1972 2451 5.278463 CCAGTTTCCAGTTAAACATGTCCAG 60.278 44.000 0.00 0.00 40.97 3.86
1973 2452 4.582656 CCAGTTTCCAGTTAAACATGTCCA 59.417 41.667 0.00 0.00 40.97 4.02
1974 2453 4.022329 CCCAGTTTCCAGTTAAACATGTCC 60.022 45.833 0.00 0.00 40.97 4.02
1975 2454 4.022329 CCCCAGTTTCCAGTTAAACATGTC 60.022 45.833 0.00 0.00 40.97 3.06
1976 2455 3.895041 CCCCAGTTTCCAGTTAAACATGT 59.105 43.478 0.00 0.00 40.97 3.21
1977 2456 3.258123 CCCCCAGTTTCCAGTTAAACATG 59.742 47.826 0.00 0.00 40.97 3.21
1978 2457 3.506398 CCCCCAGTTTCCAGTTAAACAT 58.494 45.455 0.00 0.00 40.97 2.71
1979 2458 2.952116 CCCCCAGTTTCCAGTTAAACA 58.048 47.619 0.00 0.00 40.97 2.83
1980 2459 1.616865 GCCCCCAGTTTCCAGTTAAAC 59.383 52.381 0.00 0.00 39.22 2.01
1981 2460 1.218196 TGCCCCCAGTTTCCAGTTAAA 59.782 47.619 0.00 0.00 0.00 1.52
1982 2461 0.854218 TGCCCCCAGTTTCCAGTTAA 59.146 50.000 0.00 0.00 0.00 2.01
1983 2462 0.404040 CTGCCCCCAGTTTCCAGTTA 59.596 55.000 0.00 0.00 34.31 2.24
1984 2463 1.153756 CTGCCCCCAGTTTCCAGTT 59.846 57.895 0.00 0.00 34.31 3.16
1985 2464 2.846532 CTGCCCCCAGTTTCCAGT 59.153 61.111 0.00 0.00 34.31 4.00
1996 2475 4.129148 GATGGGTCCCACTGCCCC 62.129 72.222 14.57 0.00 44.20 5.80
1997 2476 4.129148 GGATGGGTCCCACTGCCC 62.129 72.222 14.57 8.70 45.04 5.36
1998 2477 2.616458 AAGGATGGGTCCCACTGCC 61.616 63.158 14.57 15.15 46.34 4.85
1999 2478 1.379044 CAAGGATGGGTCCCACTGC 60.379 63.158 14.57 8.20 46.34 4.40
2000 2479 0.698238 TTCAAGGATGGGTCCCACTG 59.302 55.000 14.57 8.70 46.34 3.66
2001 2480 1.455822 TTTCAAGGATGGGTCCCACT 58.544 50.000 14.57 3.56 46.34 4.00
2002 2481 2.291540 TGATTTCAAGGATGGGTCCCAC 60.292 50.000 14.57 7.36 46.34 4.61
2003 2482 1.999295 TGATTTCAAGGATGGGTCCCA 59.001 47.619 14.64 14.64 46.34 4.37
2004 2483 2.659428 CTGATTTCAAGGATGGGTCCC 58.341 52.381 0.00 0.00 46.34 4.46
2005 2484 2.027385 GCTGATTTCAAGGATGGGTCC 58.973 52.381 0.00 0.00 45.45 4.46
2006 2485 1.672881 CGCTGATTTCAAGGATGGGTC 59.327 52.381 0.00 0.00 0.00 4.46
2007 2486 1.683011 CCGCTGATTTCAAGGATGGGT 60.683 52.381 0.00 0.00 0.00 4.51
2008 2487 1.027357 CCGCTGATTTCAAGGATGGG 58.973 55.000 0.00 0.00 0.00 4.00
2009 2488 1.027357 CCCGCTGATTTCAAGGATGG 58.973 55.000 3.98 0.00 0.00 3.51
2010 2489 1.027357 CCCCGCTGATTTCAAGGATG 58.973 55.000 3.98 0.00 0.00 3.51
2011 2490 0.106519 CCCCCGCTGATTTCAAGGAT 60.107 55.000 3.98 0.00 0.00 3.24
2012 2491 1.204786 TCCCCCGCTGATTTCAAGGA 61.205 55.000 3.98 0.00 0.00 3.36
2013 2492 0.749454 CTCCCCCGCTGATTTCAAGG 60.749 60.000 0.00 0.00 0.00 3.61
2014 2493 0.253044 TCTCCCCCGCTGATTTCAAG 59.747 55.000 0.00 0.00 0.00 3.02
2015 2494 0.253044 CTCTCCCCCGCTGATTTCAA 59.747 55.000 0.00 0.00 0.00 2.69
2016 2495 1.626356 CCTCTCCCCCGCTGATTTCA 61.626 60.000 0.00 0.00 0.00 2.69
2017 2496 1.147153 CCTCTCCCCCGCTGATTTC 59.853 63.158 0.00 0.00 0.00 2.17
2018 2497 2.378634 CCCTCTCCCCCGCTGATTT 61.379 63.158 0.00 0.00 0.00 2.17
2019 2498 2.628187 ATCCCTCTCCCCCGCTGATT 62.628 60.000 0.00 0.00 0.00 2.57
2020 2499 2.628187 AATCCCTCTCCCCCGCTGAT 62.628 60.000 0.00 0.00 0.00 2.90
2021 2500 3.332393 AATCCCTCTCCCCCGCTGA 62.332 63.158 0.00 0.00 0.00 4.26
2022 2501 2.770048 AATCCCTCTCCCCCGCTG 60.770 66.667 0.00 0.00 0.00 5.18
2023 2502 2.770048 CAATCCCTCTCCCCCGCT 60.770 66.667 0.00 0.00 0.00 5.52
2024 2503 3.878667 CCAATCCCTCTCCCCCGC 61.879 72.222 0.00 0.00 0.00 6.13
2025 2504 2.366972 ACCAATCCCTCTCCCCCG 60.367 66.667 0.00 0.00 0.00 5.73
2026 2505 0.699231 ATGACCAATCCCTCTCCCCC 60.699 60.000 0.00 0.00 0.00 5.40
2027 2506 1.133668 CAATGACCAATCCCTCTCCCC 60.134 57.143 0.00 0.00 0.00 4.81
2028 2507 1.133668 CCAATGACCAATCCCTCTCCC 60.134 57.143 0.00 0.00 0.00 4.30
2029 2508 1.566231 ACCAATGACCAATCCCTCTCC 59.434 52.381 0.00 0.00 0.00 3.71
2030 2509 3.372440 AACCAATGACCAATCCCTCTC 57.628 47.619 0.00 0.00 0.00 3.20
2031 2510 3.852578 ACTAACCAATGACCAATCCCTCT 59.147 43.478 0.00 0.00 0.00 3.69
2032 2511 3.947834 CACTAACCAATGACCAATCCCTC 59.052 47.826 0.00 0.00 0.00 4.30
2033 2512 3.309121 CCACTAACCAATGACCAATCCCT 60.309 47.826 0.00 0.00 0.00 4.20
2034 2513 3.023832 CCACTAACCAATGACCAATCCC 58.976 50.000 0.00 0.00 0.00 3.85
2035 2514 3.023832 CCCACTAACCAATGACCAATCC 58.976 50.000 0.00 0.00 0.00 3.01
2036 2515 3.023832 CCCCACTAACCAATGACCAATC 58.976 50.000 0.00 0.00 0.00 2.67
2037 2516 2.381961 ACCCCACTAACCAATGACCAAT 59.618 45.455 0.00 0.00 0.00 3.16
2038 2517 1.783979 ACCCCACTAACCAATGACCAA 59.216 47.619 0.00 0.00 0.00 3.67
2039 2518 1.074727 CACCCCACTAACCAATGACCA 59.925 52.381 0.00 0.00 0.00 4.02
2040 2519 1.834188 CACCCCACTAACCAATGACC 58.166 55.000 0.00 0.00 0.00 4.02
2041 2520 1.173913 GCACCCCACTAACCAATGAC 58.826 55.000 0.00 0.00 0.00 3.06
2042 2521 0.774276 TGCACCCCACTAACCAATGA 59.226 50.000 0.00 0.00 0.00 2.57
2043 2522 1.176527 CTGCACCCCACTAACCAATG 58.823 55.000 0.00 0.00 0.00 2.82
2044 2523 0.777446 ACTGCACCCCACTAACCAAT 59.223 50.000 0.00 0.00 0.00 3.16
2045 2524 0.109723 GACTGCACCCCACTAACCAA 59.890 55.000 0.00 0.00 0.00 3.67
2046 2525 1.758592 GACTGCACCCCACTAACCA 59.241 57.895 0.00 0.00 0.00 3.67
2047 2526 1.002502 GGACTGCACCCCACTAACC 60.003 63.158 0.00 0.00 0.00 2.85
2048 2527 1.375523 CGGACTGCACCCCACTAAC 60.376 63.158 1.10 0.00 0.00 2.34
2049 2528 0.542467 TACGGACTGCACCCCACTAA 60.542 55.000 1.10 0.00 0.00 2.24
2050 2529 0.542467 TTACGGACTGCACCCCACTA 60.542 55.000 1.10 0.00 0.00 2.74
2051 2530 1.827399 CTTACGGACTGCACCCCACT 61.827 60.000 1.10 0.00 0.00 4.00
2052 2531 1.375523 CTTACGGACTGCACCCCAC 60.376 63.158 1.10 0.00 0.00 4.61
2053 2532 0.907704 ATCTTACGGACTGCACCCCA 60.908 55.000 1.10 0.00 0.00 4.96
2054 2533 0.252197 AATCTTACGGACTGCACCCC 59.748 55.000 0.00 0.00 0.00 4.95
2055 2534 1.066430 TGAATCTTACGGACTGCACCC 60.066 52.381 0.00 0.00 0.00 4.61
2056 2535 2.380084 TGAATCTTACGGACTGCACC 57.620 50.000 0.00 0.00 0.00 5.01
2057 2536 5.050490 ACATATGAATCTTACGGACTGCAC 58.950 41.667 10.38 0.00 0.00 4.57
2058 2537 5.276461 ACATATGAATCTTACGGACTGCA 57.724 39.130 10.38 0.00 0.00 4.41
2059 2538 9.587772 AATATACATATGAATCTTACGGACTGC 57.412 33.333 10.38 0.00 0.00 4.40
2061 2540 9.587772 GCAATATACATATGAATCTTACGGACT 57.412 33.333 10.38 0.00 0.00 3.85
2062 2541 8.818057 GGCAATATACATATGAATCTTACGGAC 58.182 37.037 10.38 0.00 0.00 4.79
2063 2542 7.985184 GGGCAATATACATATGAATCTTACGGA 59.015 37.037 10.38 0.00 0.00 4.69
2064 2543 7.042725 CGGGCAATATACATATGAATCTTACGG 60.043 40.741 10.38 0.00 0.00 4.02
2065 2544 7.491372 ACGGGCAATATACATATGAATCTTACG 59.509 37.037 10.38 6.13 0.00 3.18
2066 2545 8.718102 ACGGGCAATATACATATGAATCTTAC 57.282 34.615 10.38 0.00 0.00 2.34
2068 2547 9.383519 CTTACGGGCAATATACATATGAATCTT 57.616 33.333 10.38 0.00 0.00 2.40
2069 2548 8.540388 ACTTACGGGCAATATACATATGAATCT 58.460 33.333 10.38 0.00 0.00 2.40
2070 2549 8.604035 CACTTACGGGCAATATACATATGAATC 58.396 37.037 10.38 0.00 0.00 2.52
2071 2550 8.100791 ACACTTACGGGCAATATACATATGAAT 58.899 33.333 10.38 0.00 0.00 2.57
2072 2551 7.446769 ACACTTACGGGCAATATACATATGAA 58.553 34.615 10.38 0.00 0.00 2.57
2073 2552 6.999950 ACACTTACGGGCAATATACATATGA 58.000 36.000 10.38 0.00 0.00 2.15
2074 2553 7.010183 GCTACACTTACGGGCAATATACATATG 59.990 40.741 0.00 0.00 0.00 1.78
2075 2554 7.039882 GCTACACTTACGGGCAATATACATAT 58.960 38.462 0.00 0.00 0.00 1.78
2076 2555 6.015265 TGCTACACTTACGGGCAATATACATA 60.015 38.462 0.00 0.00 0.00 2.29
2077 2556 5.221561 TGCTACACTTACGGGCAATATACAT 60.222 40.000 0.00 0.00 0.00 2.29
2078 2557 4.099727 TGCTACACTTACGGGCAATATACA 59.900 41.667 0.00 0.00 0.00 2.29
2079 2558 4.624015 TGCTACACTTACGGGCAATATAC 58.376 43.478 0.00 0.00 0.00 1.47
2080 2559 4.940905 TGCTACACTTACGGGCAATATA 57.059 40.909 0.00 0.00 0.00 0.86
2081 2560 3.830744 TGCTACACTTACGGGCAATAT 57.169 42.857 0.00 0.00 0.00 1.28
2082 2561 3.830744 ATGCTACACTTACGGGCAATA 57.169 42.857 0.00 0.00 36.49 1.90
2083 2562 2.710096 ATGCTACACTTACGGGCAAT 57.290 45.000 0.00 0.00 36.49 3.56
2084 2563 2.483014 AATGCTACACTTACGGGCAA 57.517 45.000 0.00 0.00 36.49 4.52
2085 2564 2.483014 AAATGCTACACTTACGGGCA 57.517 45.000 0.00 0.00 37.32 5.36
2086 2565 3.189702 TCAAAAATGCTACACTTACGGGC 59.810 43.478 0.00 0.00 0.00 6.13
2087 2566 5.560966 ATCAAAAATGCTACACTTACGGG 57.439 39.130 0.00 0.00 0.00 5.28
2088 2567 9.221775 GAATAATCAAAAATGCTACACTTACGG 57.778 33.333 0.00 0.00 0.00 4.02
2089 2568 9.767684 TGAATAATCAAAAATGCTACACTTACG 57.232 29.630 0.00 0.00 30.99 3.18
2091 2570 9.787532 GCTGAATAATCAAAAATGCTACACTTA 57.212 29.630 0.00 0.00 34.49 2.24
2092 2571 7.485913 CGCTGAATAATCAAAAATGCTACACTT 59.514 33.333 0.00 0.00 34.49 3.16
2093 2572 6.968904 CGCTGAATAATCAAAAATGCTACACT 59.031 34.615 0.00 0.00 34.49 3.55
2094 2573 6.966632 TCGCTGAATAATCAAAAATGCTACAC 59.033 34.615 0.00 0.00 34.49 2.90
2095 2574 7.082700 TCGCTGAATAATCAAAAATGCTACA 57.917 32.000 0.00 0.00 34.49 2.74
2096 2575 7.969387 TTCGCTGAATAATCAAAAATGCTAC 57.031 32.000 0.00 0.00 34.49 3.58
2097 2576 8.190122 ACATTCGCTGAATAATCAAAAATGCTA 58.810 29.630 3.96 0.00 34.90 3.49
2098 2577 7.037438 ACATTCGCTGAATAATCAAAAATGCT 58.963 30.769 3.96 0.00 34.90 3.79
2099 2578 7.225523 ACATTCGCTGAATAATCAAAAATGC 57.774 32.000 3.96 0.00 34.90 3.56
2100 2579 8.046132 CGAACATTCGCTGAATAATCAAAAATG 58.954 33.333 0.37 7.43 44.26 2.32
2101 2580 8.107591 CGAACATTCGCTGAATAATCAAAAAT 57.892 30.769 0.37 0.00 44.26 1.82
2102 2581 7.491254 CGAACATTCGCTGAATAATCAAAAA 57.509 32.000 0.37 0.00 44.26 1.94
2148 2627 4.091365 GCCATAAATTGCCGTGAAAACTTC 59.909 41.667 0.00 0.00 0.00 3.01
2177 2656 4.796038 ATTTCCCATGCTCACTTGAAAG 57.204 40.909 0.00 0.00 0.00 2.62
2188 2667 7.049754 AGGATTTTATGTGAAATTTCCCATGC 58.950 34.615 21.90 5.71 29.75 4.06
2190 2669 8.480501 CAGAGGATTTTATGTGAAATTTCCCAT 58.519 33.333 18.29 18.29 29.75 4.00
2269 2748 9.130312 GTTGCGAATGTTTTGTATGGTAAATTA 57.870 29.630 0.00 0.00 0.00 1.40
2275 2754 4.277174 TCAGTTGCGAATGTTTTGTATGGT 59.723 37.500 0.56 0.00 0.00 3.55
2295 2774 3.198635 AGGTCTATTGTGGGACATGTCAG 59.801 47.826 26.47 13.56 44.52 3.51
2311 2790 6.325804 GGACCCTAATAACTAGCAAAGGTCTA 59.674 42.308 0.00 0.00 36.35 2.59
2313 2792 5.104652 TGGACCCTAATAACTAGCAAAGGTC 60.105 44.000 0.00 0.00 35.80 3.85
2316 2795 8.837389 GTTTATGGACCCTAATAACTAGCAAAG 58.163 37.037 0.00 0.00 0.00 2.77
2326 2805 6.436027 TGGCAATTGTTTATGGACCCTAATA 58.564 36.000 7.40 0.00 0.00 0.98
2430 2909 4.567127 CAAAAGTTACGACACGAACGAAA 58.433 39.130 0.14 0.00 34.70 3.46
2437 2916 1.595794 ACAGGCAAAAGTTACGACACG 59.404 47.619 0.00 0.00 0.00 4.49
2438 2917 3.685836 AACAGGCAAAAGTTACGACAC 57.314 42.857 0.00 0.00 0.00 3.67
2439 2918 7.493743 TTATAAACAGGCAAAAGTTACGACA 57.506 32.000 0.00 0.00 0.00 4.35
2473 2952 0.041312 GCAACTCGTCGCAACAATGT 60.041 50.000 0.00 0.00 0.00 2.71
2516 2995 2.526110 GGTGGAAGTTTGGGGCCT 59.474 61.111 0.84 0.00 0.00 5.19
2538 3017 4.957296 AGAAACACTCTTACAATGACGGT 58.043 39.130 0.00 0.00 0.00 4.83
2581 3060 2.158696 AGCTAGTCATGATGGCCTTTCC 60.159 50.000 3.32 0.00 0.00 3.13
2582 3061 3.205784 AGCTAGTCATGATGGCCTTTC 57.794 47.619 3.32 1.19 0.00 2.62
2583 3062 3.659183 AAGCTAGTCATGATGGCCTTT 57.341 42.857 3.32 0.00 0.00 3.11
2584 3063 3.659183 AAAGCTAGTCATGATGGCCTT 57.341 42.857 3.32 0.00 0.00 4.35
2585 3064 4.989875 ATAAAGCTAGTCATGATGGCCT 57.010 40.909 3.32 0.00 0.00 5.19
2586 3065 4.217118 CCAATAAAGCTAGTCATGATGGCC 59.783 45.833 0.00 0.00 0.00 5.36
2587 3066 4.320788 GCCAATAAAGCTAGTCATGATGGC 60.321 45.833 12.43 12.43 42.26 4.40
2588 3067 5.068636 AGCCAATAAAGCTAGTCATGATGG 58.931 41.667 0.00 0.00 39.29 3.51
2589 3068 6.630444 AAGCCAATAAAGCTAGTCATGATG 57.370 37.500 0.00 0.00 40.49 3.07
2590 3069 8.752005 TTTAAGCCAATAAAGCTAGTCATGAT 57.248 30.769 0.00 0.00 40.49 2.45
2591 3070 8.574251 TTTTAAGCCAATAAAGCTAGTCATGA 57.426 30.769 0.00 0.00 40.49 3.07
2592 3071 9.294030 CTTTTTAAGCCAATAAAGCTAGTCATG 57.706 33.333 0.00 0.00 40.49 3.07
2593 3072 8.470002 CCTTTTTAAGCCAATAAAGCTAGTCAT 58.530 33.333 0.00 0.00 40.49 3.06
2594 3073 7.668052 TCCTTTTTAAGCCAATAAAGCTAGTCA 59.332 33.333 0.00 0.00 40.49 3.41
2595 3074 8.051901 TCCTTTTTAAGCCAATAAAGCTAGTC 57.948 34.615 0.00 0.00 40.49 2.59
2596 3075 8.417273 TTCCTTTTTAAGCCAATAAAGCTAGT 57.583 30.769 0.00 0.00 40.49 2.57
2597 3076 9.875691 AATTCCTTTTTAAGCCAATAAAGCTAG 57.124 29.630 0.00 0.00 40.49 3.42
2599 3078 9.653287 GTAATTCCTTTTTAAGCCAATAAAGCT 57.347 29.630 0.00 0.00 44.19 3.74
2600 3079 9.430623 TGTAATTCCTTTTTAAGCCAATAAAGC 57.569 29.630 0.00 0.00 0.00 3.51
2605 3084 9.435688 GACAATGTAATTCCTTTTTAAGCCAAT 57.564 29.630 0.00 0.00 31.22 3.16
2606 3085 7.875554 GGACAATGTAATTCCTTTTTAAGCCAA 59.124 33.333 0.00 0.00 31.22 4.52
2607 3086 7.015682 TGGACAATGTAATTCCTTTTTAAGCCA 59.984 33.333 0.00 0.00 31.22 4.75
2608 3087 7.330946 GTGGACAATGTAATTCCTTTTTAAGCC 59.669 37.037 0.00 0.00 31.22 4.35
2609 3088 7.870445 TGTGGACAATGTAATTCCTTTTTAAGC 59.130 33.333 0.00 0.00 31.22 3.09
2610 3089 9.757227 TTGTGGACAATGTAATTCCTTTTTAAG 57.243 29.630 0.00 0.00 31.22 1.85
2611 3090 9.757227 CTTGTGGACAATGTAATTCCTTTTTAA 57.243 29.630 0.00 0.00 31.22 1.52
2612 3091 8.364142 CCTTGTGGACAATGTAATTCCTTTTTA 58.636 33.333 0.00 0.00 35.02 1.52
2613 3092 7.147567 ACCTTGTGGACAATGTAATTCCTTTTT 60.148 33.333 0.00 0.00 33.89 1.94
2614 3093 6.326323 ACCTTGTGGACAATGTAATTCCTTTT 59.674 34.615 0.00 0.00 33.89 2.27
2615 3094 5.838521 ACCTTGTGGACAATGTAATTCCTTT 59.161 36.000 0.00 0.00 33.89 3.11
2616 3095 5.393866 ACCTTGTGGACAATGTAATTCCTT 58.606 37.500 0.00 0.00 33.89 3.36
2617 3096 4.998051 ACCTTGTGGACAATGTAATTCCT 58.002 39.130 0.00 0.00 33.89 3.36
2618 3097 5.722021 AACCTTGTGGACAATGTAATTCC 57.278 39.130 1.51 0.00 34.41 3.01
2619 3098 6.744112 TCAAACCTTGTGGACAATGTAATTC 58.256 36.000 1.51 0.00 34.41 2.17
2620 3099 6.549364 TCTCAAACCTTGTGGACAATGTAATT 59.451 34.615 1.51 0.00 34.41 1.40
2621 3100 6.016276 GTCTCAAACCTTGTGGACAATGTAAT 60.016 38.462 1.51 0.00 34.41 1.89
2622 3101 5.298276 GTCTCAAACCTTGTGGACAATGTAA 59.702 40.000 1.51 0.00 34.41 2.41
2623 3102 4.819630 GTCTCAAACCTTGTGGACAATGTA 59.180 41.667 1.51 0.00 34.41 2.29
2624 3103 3.632145 GTCTCAAACCTTGTGGACAATGT 59.368 43.478 0.00 0.00 36.49 2.71
2625 3104 3.004734 GGTCTCAAACCTTGTGGACAATG 59.995 47.826 12.97 0.00 45.45 2.82
2626 3105 3.222603 GGTCTCAAACCTTGTGGACAAT 58.777 45.455 12.97 0.00 45.45 2.71
2627 3106 2.650322 GGTCTCAAACCTTGTGGACAA 58.350 47.619 12.97 0.00 45.45 3.18
2628 3107 2.341846 GGTCTCAAACCTTGTGGACA 57.658 50.000 12.97 0.00 45.45 4.02
2638 3117 0.951040 CGGGCTGTCTGGTCTCAAAC 60.951 60.000 0.00 0.00 0.00 2.93
2639 3118 1.118965 TCGGGCTGTCTGGTCTCAAA 61.119 55.000 0.00 0.00 0.00 2.69
2640 3119 1.118965 TTCGGGCTGTCTGGTCTCAA 61.119 55.000 0.00 0.00 0.00 3.02
2641 3120 1.533033 TTCGGGCTGTCTGGTCTCA 60.533 57.895 0.00 0.00 0.00 3.27
2642 3121 1.216710 CTTCGGGCTGTCTGGTCTC 59.783 63.158 0.00 0.00 0.00 3.36
2643 3122 2.286523 CCTTCGGGCTGTCTGGTCT 61.287 63.158 0.00 0.00 0.00 3.85
2644 3123 2.266055 CCTTCGGGCTGTCTGGTC 59.734 66.667 0.00 0.00 0.00 4.02
2657 3136 0.391263 ATTTGGACGGACGAGCCTTC 60.391 55.000 0.00 0.00 34.27 3.46
2658 3137 0.673644 CATTTGGACGGACGAGCCTT 60.674 55.000 0.00 0.00 0.00 4.35
2659 3138 1.079127 CATTTGGACGGACGAGCCT 60.079 57.895 0.00 0.00 0.00 4.58
2660 3139 2.750888 GCATTTGGACGGACGAGCC 61.751 63.158 0.00 0.00 0.00 4.70
2661 3140 0.459585 TAGCATTTGGACGGACGAGC 60.460 55.000 0.00 0.00 0.00 5.03
2662 3141 1.134367 TCTAGCATTTGGACGGACGAG 59.866 52.381 0.00 0.00 0.00 4.18
2663 3142 1.134367 CTCTAGCATTTGGACGGACGA 59.866 52.381 0.00 0.00 0.00 4.20
2664 3143 1.134367 TCTCTAGCATTTGGACGGACG 59.866 52.381 0.00 0.00 0.00 4.79
2665 3144 2.961526 TCTCTAGCATTTGGACGGAC 57.038 50.000 0.00 0.00 0.00 4.79
2666 3145 4.487714 AATTCTCTAGCATTTGGACGGA 57.512 40.909 0.00 0.00 0.00 4.69
2667 3146 6.867662 ATAAATTCTCTAGCATTTGGACGG 57.132 37.500 0.00 0.00 0.00 4.79
2668 3147 8.826710 TGTAATAAATTCTCTAGCATTTGGACG 58.173 33.333 0.00 0.00 0.00 4.79
2690 3169 9.878667 TGTGCTAGCTAAACATAGTTATTGTAA 57.121 29.630 17.23 0.00 0.00 2.41
2692 3171 8.830580 CATGTGCTAGCTAAACATAGTTATTGT 58.169 33.333 17.23 0.00 33.31 2.71
2693 3172 7.800380 GCATGTGCTAGCTAAACATAGTTATTG 59.200 37.037 17.23 6.56 38.21 1.90
2694 3173 7.307396 CGCATGTGCTAGCTAAACATAGTTATT 60.307 37.037 17.23 0.00 39.32 1.40
2695 3174 6.146184 CGCATGTGCTAGCTAAACATAGTTAT 59.854 38.462 17.23 0.00 39.32 1.89
2696 3175 5.462068 CGCATGTGCTAGCTAAACATAGTTA 59.538 40.000 17.23 0.00 39.32 2.24
2697 3176 4.271049 CGCATGTGCTAGCTAAACATAGTT 59.729 41.667 17.23 0.00 39.32 2.24
2698 3177 3.804325 CGCATGTGCTAGCTAAACATAGT 59.196 43.478 17.23 0.00 39.32 2.12
2699 3178 3.363378 GCGCATGTGCTAGCTAAACATAG 60.363 47.826 23.77 14.36 39.32 2.23
2700 3179 2.543848 GCGCATGTGCTAGCTAAACATA 59.456 45.455 23.77 7.99 39.32 2.29
2701 3180 1.331756 GCGCATGTGCTAGCTAAACAT 59.668 47.619 23.77 14.34 39.32 2.71
2702 3181 0.726827 GCGCATGTGCTAGCTAAACA 59.273 50.000 23.77 12.53 39.32 2.83
2703 3182 0.028110 GGCGCATGTGCTAGCTAAAC 59.972 55.000 28.86 6.50 39.32 2.01
2704 3183 1.428370 CGGCGCATGTGCTAGCTAAA 61.428 55.000 28.86 1.39 39.32 1.85
2705 3184 1.882625 CGGCGCATGTGCTAGCTAA 60.883 57.895 28.86 4.18 39.32 3.09
2706 3185 2.279451 CGGCGCATGTGCTAGCTA 60.279 61.111 28.86 5.45 39.32 3.32
2709 3188 1.428370 TAAAGCGGCGCATGTGCTAG 61.428 55.000 35.02 22.96 38.17 3.42
2710 3189 0.813610 ATAAAGCGGCGCATGTGCTA 60.814 50.000 35.02 14.53 38.17 3.49
2711 3190 1.656818 AATAAAGCGGCGCATGTGCT 61.657 50.000 35.02 9.30 41.60 4.40
2712 3191 0.801836 AAATAAAGCGGCGCATGTGC 60.802 50.000 35.02 23.05 37.78 4.57
2713 3192 0.915904 CAAATAAAGCGGCGCATGTG 59.084 50.000 35.02 19.77 0.00 3.21
2714 3193 0.801836 GCAAATAAAGCGGCGCATGT 60.802 50.000 35.02 20.17 0.00 3.21
2715 3194 0.801451 TGCAAATAAAGCGGCGCATG 60.801 50.000 35.02 21.17 33.85 4.06
2716 3195 0.102844 ATGCAAATAAAGCGGCGCAT 59.897 45.000 35.02 21.29 35.36 4.73
2717 3196 0.108898 AATGCAAATAAAGCGGCGCA 60.109 45.000 35.02 14.60 33.85 6.09
2718 3197 1.516864 GTAATGCAAATAAAGCGGCGC 59.483 47.619 26.86 26.86 33.85 6.53
2719 3198 1.772966 CGTAATGCAAATAAAGCGGCG 59.227 47.619 0.51 0.51 33.85 6.46
2720 3199 3.035942 CTCGTAATGCAAATAAAGCGGC 58.964 45.455 0.00 0.00 33.85 6.53
2721 3200 3.311322 TCCTCGTAATGCAAATAAAGCGG 59.689 43.478 0.00 0.00 33.85 5.52
2722 3201 4.201773 TGTCCTCGTAATGCAAATAAAGCG 60.202 41.667 0.00 0.00 33.85 4.68
2723 3202 5.229921 TGTCCTCGTAATGCAAATAAAGC 57.770 39.130 0.00 0.00 0.00 3.51
2724 3203 7.669438 CATTGTCCTCGTAATGCAAATAAAG 57.331 36.000 0.00 0.00 0.00 1.85
2733 3212 7.967854 TCAAATTTAAGCATTGTCCTCGTAATG 59.032 33.333 0.00 0.00 37.35 1.90
2734 3213 7.968405 GTCAAATTTAAGCATTGTCCTCGTAAT 59.032 33.333 0.00 0.00 0.00 1.89
2735 3214 7.302524 GTCAAATTTAAGCATTGTCCTCGTAA 58.697 34.615 0.00 0.00 0.00 3.18
2736 3215 6.128117 GGTCAAATTTAAGCATTGTCCTCGTA 60.128 38.462 0.00 0.00 32.04 3.43
2737 3216 5.335661 GGTCAAATTTAAGCATTGTCCTCGT 60.336 40.000 0.00 0.00 32.04 4.18
2738 3217 5.095490 GGTCAAATTTAAGCATTGTCCTCG 58.905 41.667 0.00 0.00 32.04 4.63
2739 3218 6.272822 AGGTCAAATTTAAGCATTGTCCTC 57.727 37.500 8.73 0.00 37.86 3.71
2740 3219 6.295292 GGAAGGTCAAATTTAAGCATTGTCCT 60.295 38.462 8.73 8.73 41.98 3.85
2741 3220 5.869344 GGAAGGTCAAATTTAAGCATTGTCC 59.131 40.000 0.00 0.00 34.02 4.02
2742 3221 5.869344 GGGAAGGTCAAATTTAAGCATTGTC 59.131 40.000 0.00 0.00 0.00 3.18
2743 3222 5.306678 TGGGAAGGTCAAATTTAAGCATTGT 59.693 36.000 0.00 0.00 0.00 2.71
2744 3223 5.792741 TGGGAAGGTCAAATTTAAGCATTG 58.207 37.500 0.00 0.00 0.00 2.82
2745 3224 6.432403 TTGGGAAGGTCAAATTTAAGCATT 57.568 33.333 0.00 0.00 0.00 3.56
2746 3225 6.213195 TGATTGGGAAGGTCAAATTTAAGCAT 59.787 34.615 0.00 0.00 0.00 3.79
2747 3226 5.541868 TGATTGGGAAGGTCAAATTTAAGCA 59.458 36.000 0.00 0.00 0.00 3.91
2748 3227 6.036577 TGATTGGGAAGGTCAAATTTAAGC 57.963 37.500 0.00 0.00 0.00 3.09
2749 3228 8.150296 ACTTTGATTGGGAAGGTCAAATTTAAG 58.850 33.333 0.00 0.00 40.05 1.85
2750 3229 8.028652 ACTTTGATTGGGAAGGTCAAATTTAA 57.971 30.769 0.00 0.00 40.05 1.52
2751 3230 7.523052 CGACTTTGATTGGGAAGGTCAAATTTA 60.523 37.037 0.00 0.00 40.05 1.40
2752 3231 6.499106 ACTTTGATTGGGAAGGTCAAATTT 57.501 33.333 0.00 0.00 40.05 1.82
2753 3232 5.278957 CGACTTTGATTGGGAAGGTCAAATT 60.279 40.000 0.00 0.00 40.05 1.82
2754 3233 4.218417 CGACTTTGATTGGGAAGGTCAAAT 59.782 41.667 0.00 0.00 40.05 2.32
2755 3234 3.568007 CGACTTTGATTGGGAAGGTCAAA 59.432 43.478 0.00 0.00 38.95 2.69
2756 3235 3.146066 CGACTTTGATTGGGAAGGTCAA 58.854 45.455 0.00 0.00 0.00 3.18
2757 3236 2.370519 TCGACTTTGATTGGGAAGGTCA 59.629 45.455 0.00 0.00 0.00 4.02
2758 3237 3.053831 TCGACTTTGATTGGGAAGGTC 57.946 47.619 0.00 0.00 0.00 3.85
2759 3238 3.502123 TTCGACTTTGATTGGGAAGGT 57.498 42.857 0.00 0.00 0.00 3.50
2760 3239 3.568007 TGTTTCGACTTTGATTGGGAAGG 59.432 43.478 0.00 0.00 0.00 3.46
2761 3240 4.829064 TGTTTCGACTTTGATTGGGAAG 57.171 40.909 0.00 0.00 0.00 3.46
2762 3241 5.371115 GATGTTTCGACTTTGATTGGGAA 57.629 39.130 0.00 0.00 0.00 3.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.