Multiple sequence alignment - TraesCS5A01G190400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G190400 chr5A 100.000 4869 0 0 1 4869 394760357 394755489 0.000000e+00 8992.0
1 TraesCS5A01G190400 chr5A 88.095 84 2 1 654 737 392325555 392325480 5.190000e-15 93.5
2 TraesCS5A01G190400 chr5A 95.745 47 2 0 1562 1608 394758761 394758715 5.230000e-10 76.8
3 TraesCS5A01G190400 chr5A 95.745 47 2 0 1597 1643 394758796 394758750 5.230000e-10 76.8
4 TraesCS5A01G190400 chr5B 93.520 2886 141 25 1597 4459 347984180 347987042 0.000000e+00 4252.0
5 TraesCS5A01G190400 chr5B 93.921 839 37 6 772 1608 347983400 347984226 0.000000e+00 1254.0
6 TraesCS5A01G190400 chr5B 93.012 415 20 6 4458 4869 347987082 347987490 9.020000e-167 597.0
7 TraesCS5A01G190400 chr5D 94.811 1561 69 10 1597 3152 302968367 302969920 0.000000e+00 2423.0
8 TraesCS5A01G190400 chr5D 91.667 1332 84 14 3149 4459 302970006 302971331 0.000000e+00 1820.0
9 TraesCS5A01G190400 chr5D 96.651 866 26 1 743 1608 302967551 302968413 0.000000e+00 1435.0
10 TraesCS5A01G190400 chr5D 95.631 412 10 3 4458 4869 302971371 302971774 0.000000e+00 654.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G190400 chr5A 394755489 394760357 4868 True 3048.533333 8992 97.163333 1 4869 3 chr5A.!!$R2 4868
1 TraesCS5A01G190400 chr5B 347983400 347987490 4090 False 2034.333333 4252 93.484333 772 4869 3 chr5B.!!$F1 4097
2 TraesCS5A01G190400 chr5D 302967551 302971774 4223 False 1583.000000 2423 94.690000 743 4869 4 chr5D.!!$F1 4126

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
239 240 0.037303 AGCAGCAACACAGTAGCCAT 59.963 50.0 0.0 0.0 0.00 4.40 F
1118 1120 0.096628 CTTACCTCGTGTCTCGGTCG 59.903 60.0 0.0 0.0 40.32 4.79 F
2236 2241 0.184692 TGTGGACTGTGATTTGGCCA 59.815 50.0 0.0 0.0 0.00 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1256 1259 1.078848 CGTTCTTCCCCAGGCAGAG 60.079 63.158 0.0 0.0 0.00 3.35 R
2336 2341 1.745489 CCTAAGGGAACTGCACGCC 60.745 63.158 0.0 0.0 42.68 5.68 R
3974 4075 0.247736 ACGCAGCTACTCCAGAAAGG 59.752 55.000 0.0 0.0 39.47 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.664402 ACATGCTTGGAACTGGACTT 57.336 45.000 4.44 0.00 0.00 3.01
23 24 2.949447 ACATGCTTGGAACTGGACTTT 58.051 42.857 4.44 0.00 0.00 2.66
24 25 3.299503 ACATGCTTGGAACTGGACTTTT 58.700 40.909 4.44 0.00 0.00 2.27
25 26 4.469657 ACATGCTTGGAACTGGACTTTTA 58.530 39.130 4.44 0.00 0.00 1.52
26 27 5.079643 ACATGCTTGGAACTGGACTTTTAT 58.920 37.500 4.44 0.00 0.00 1.40
27 28 5.539955 ACATGCTTGGAACTGGACTTTTATT 59.460 36.000 4.44 0.00 0.00 1.40
28 29 6.041979 ACATGCTTGGAACTGGACTTTTATTT 59.958 34.615 4.44 0.00 0.00 1.40
29 30 7.232534 ACATGCTTGGAACTGGACTTTTATTTA 59.767 33.333 4.44 0.00 0.00 1.40
30 31 7.775053 TGCTTGGAACTGGACTTTTATTTAT 57.225 32.000 0.00 0.00 0.00 1.40
31 32 8.189119 TGCTTGGAACTGGACTTTTATTTATT 57.811 30.769 0.00 0.00 0.00 1.40
32 33 8.646900 TGCTTGGAACTGGACTTTTATTTATTT 58.353 29.630 0.00 0.00 0.00 1.40
33 34 9.489084 GCTTGGAACTGGACTTTTATTTATTTT 57.511 29.630 0.00 0.00 0.00 1.82
57 58 8.785329 TTTTATGAATGTGACACATACTAGCA 57.215 30.769 21.10 13.90 37.97 3.49
58 59 7.770801 TTATGAATGTGACACATACTAGCAC 57.229 36.000 21.10 7.88 37.97 4.40
59 60 5.146010 TGAATGTGACACATACTAGCACA 57.854 39.130 21.10 9.98 37.97 4.57
60 61 4.929211 TGAATGTGACACATACTAGCACAC 59.071 41.667 21.10 5.84 41.61 3.82
61 62 4.535526 ATGTGACACATACTAGCACACA 57.464 40.909 19.53 0.00 41.61 3.72
62 63 3.649073 TGTGACACATACTAGCACACAC 58.351 45.455 3.56 0.00 34.85 3.82
63 64 3.068873 TGTGACACATACTAGCACACACA 59.931 43.478 3.56 0.00 34.85 3.72
64 65 4.055360 GTGACACATACTAGCACACACAA 58.945 43.478 0.00 0.00 0.00 3.33
65 66 4.055360 TGACACATACTAGCACACACAAC 58.945 43.478 0.00 0.00 0.00 3.32
66 67 4.202212 TGACACATACTAGCACACACAACT 60.202 41.667 0.00 0.00 0.00 3.16
67 68 5.010213 TGACACATACTAGCACACACAACTA 59.990 40.000 0.00 0.00 0.00 2.24
68 69 5.470368 ACACATACTAGCACACACAACTAG 58.530 41.667 0.00 0.00 39.44 2.57
69 70 5.243060 ACACATACTAGCACACACAACTAGA 59.757 40.000 0.00 0.00 37.44 2.43
70 71 6.156519 CACATACTAGCACACACAACTAGAA 58.843 40.000 0.00 0.00 37.44 2.10
71 72 6.645003 CACATACTAGCACACACAACTAGAAA 59.355 38.462 0.00 0.00 37.44 2.52
72 73 7.170828 CACATACTAGCACACACAACTAGAAAA 59.829 37.037 0.00 0.00 37.44 2.29
73 74 7.713507 ACATACTAGCACACACAACTAGAAAAA 59.286 33.333 0.00 0.00 37.44 1.94
74 75 8.721478 CATACTAGCACACACAACTAGAAAAAT 58.279 33.333 0.00 0.00 37.44 1.82
75 76 6.959361 ACTAGCACACACAACTAGAAAAATG 58.041 36.000 0.00 0.00 37.44 2.32
76 77 6.765989 ACTAGCACACACAACTAGAAAAATGA 59.234 34.615 0.00 0.00 37.44 2.57
77 78 6.064846 AGCACACACAACTAGAAAAATGAG 57.935 37.500 0.00 0.00 0.00 2.90
78 79 5.009010 AGCACACACAACTAGAAAAATGAGG 59.991 40.000 0.00 0.00 0.00 3.86
79 80 5.008613 GCACACACAACTAGAAAAATGAGGA 59.991 40.000 0.00 0.00 0.00 3.71
80 81 6.662616 CACACACAACTAGAAAAATGAGGAG 58.337 40.000 0.00 0.00 0.00 3.69
81 82 5.765182 ACACACAACTAGAAAAATGAGGAGG 59.235 40.000 0.00 0.00 0.00 4.30
82 83 5.997746 CACACAACTAGAAAAATGAGGAGGA 59.002 40.000 0.00 0.00 0.00 3.71
83 84 6.656693 CACACAACTAGAAAAATGAGGAGGAT 59.343 38.462 0.00 0.00 0.00 3.24
84 85 7.175641 CACACAACTAGAAAAATGAGGAGGATT 59.824 37.037 0.00 0.00 0.00 3.01
85 86 7.725844 ACACAACTAGAAAAATGAGGAGGATTT 59.274 33.333 0.00 0.00 0.00 2.17
86 87 8.025445 CACAACTAGAAAAATGAGGAGGATTTG 58.975 37.037 0.00 0.00 0.00 2.32
87 88 7.944554 ACAACTAGAAAAATGAGGAGGATTTGA 59.055 33.333 0.00 0.00 0.00 2.69
88 89 8.796475 CAACTAGAAAAATGAGGAGGATTTGAA 58.204 33.333 0.00 0.00 0.00 2.69
89 90 9.539194 AACTAGAAAAATGAGGAGGATTTGAAT 57.461 29.630 0.00 0.00 0.00 2.57
90 91 9.539194 ACTAGAAAAATGAGGAGGATTTGAATT 57.461 29.630 0.00 0.00 0.00 2.17
93 94 8.873144 AGAAAAATGAGGAGGATTTGAATTTCA 58.127 29.630 0.00 0.00 0.00 2.69
94 95 9.662947 GAAAAATGAGGAGGATTTGAATTTCAT 57.337 29.630 0.00 0.00 0.00 2.57
95 96 9.444600 AAAAATGAGGAGGATTTGAATTTCATG 57.555 29.630 0.00 0.00 0.00 3.07
96 97 6.726490 ATGAGGAGGATTTGAATTTCATGG 57.274 37.500 0.00 0.00 0.00 3.66
97 98 5.829986 TGAGGAGGATTTGAATTTCATGGA 58.170 37.500 0.00 0.00 0.00 3.41
98 99 6.255287 TGAGGAGGATTTGAATTTCATGGAA 58.745 36.000 0.00 0.00 0.00 3.53
99 100 6.899075 TGAGGAGGATTTGAATTTCATGGAAT 59.101 34.615 0.00 0.00 0.00 3.01
100 101 7.069085 TGAGGAGGATTTGAATTTCATGGAATC 59.931 37.037 0.00 11.40 0.00 2.52
101 102 7.130775 AGGAGGATTTGAATTTCATGGAATCT 58.869 34.615 16.29 0.00 0.00 2.40
102 103 7.287235 AGGAGGATTTGAATTTCATGGAATCTC 59.713 37.037 16.29 0.59 0.00 2.75
103 104 7.069085 GGAGGATTTGAATTTCATGGAATCTCA 59.931 37.037 16.29 3.91 0.00 3.27
104 105 8.370266 AGGATTTGAATTTCATGGAATCTCAA 57.630 30.769 16.29 14.97 0.00 3.02
105 106 8.818860 AGGATTTGAATTTCATGGAATCTCAAA 58.181 29.630 24.05 24.05 34.50 2.69
106 107 9.439500 GGATTTGAATTTCATGGAATCTCAAAA 57.561 29.630 24.82 14.53 34.16 2.44
111 112 9.999660 TGAATTTCATGGAATCTCAAAATTTGA 57.000 25.926 8.25 8.25 38.17 2.69
113 114 8.782339 ATTTCATGGAATCTCAAAATTTGACC 57.218 30.769 4.03 5.33 35.46 4.02
114 115 7.543359 TTCATGGAATCTCAAAATTTGACCT 57.457 32.000 4.03 0.00 35.46 3.85
115 116 8.648698 TTCATGGAATCTCAAAATTTGACCTA 57.351 30.769 4.03 0.00 35.46 3.08
116 117 8.648698 TCATGGAATCTCAAAATTTGACCTAA 57.351 30.769 4.03 0.00 35.46 2.69
117 118 9.087871 TCATGGAATCTCAAAATTTGACCTAAA 57.912 29.630 4.03 0.00 35.46 1.85
118 119 9.143631 CATGGAATCTCAAAATTTGACCTAAAC 57.856 33.333 4.03 0.00 35.46 2.01
119 120 8.477419 TGGAATCTCAAAATTTGACCTAAACT 57.523 30.769 4.03 0.00 35.46 2.66
120 121 9.581289 TGGAATCTCAAAATTTGACCTAAACTA 57.419 29.630 4.03 0.00 35.46 2.24
121 122 9.841880 GGAATCTCAAAATTTGACCTAAACTAC 57.158 33.333 4.03 0.00 35.46 2.73
135 136 8.677300 TGACCTAAACTACTAGTAATAACACGG 58.323 37.037 3.76 2.16 0.00 4.94
136 137 8.000780 ACCTAAACTACTAGTAATAACACGGG 57.999 38.462 3.76 2.50 0.00 5.28
137 138 7.834181 ACCTAAACTACTAGTAATAACACGGGA 59.166 37.037 3.76 0.00 0.00 5.14
138 139 8.686334 CCTAAACTACTAGTAATAACACGGGAA 58.314 37.037 3.76 0.00 0.00 3.97
141 142 9.777297 AAACTACTAGTAATAACACGGGAAAAA 57.223 29.630 3.76 0.00 0.00 1.94
142 143 8.763049 ACTACTAGTAATAACACGGGAAAAAC 57.237 34.615 3.76 0.00 0.00 2.43
143 144 7.819415 ACTACTAGTAATAACACGGGAAAAACC 59.181 37.037 3.76 0.00 38.08 3.27
144 145 6.772605 ACTAGTAATAACACGGGAAAAACCT 58.227 36.000 0.00 0.00 38.98 3.50
154 155 2.931969 CGGGAAAAACCTGTATACGACC 59.068 50.000 0.00 0.00 40.03 4.79
155 156 3.273434 GGGAAAAACCTGTATACGACCC 58.727 50.000 0.00 0.00 38.98 4.46
156 157 2.931969 GGAAAAACCTGTATACGACCCG 59.068 50.000 0.00 0.00 35.41 5.28
157 158 2.678471 AAAACCTGTATACGACCCGG 57.322 50.000 0.00 0.00 0.00 5.73
158 159 0.826062 AAACCTGTATACGACCCGGG 59.174 55.000 22.25 22.25 0.00 5.73
159 160 0.324645 AACCTGTATACGACCCGGGT 60.325 55.000 30.81 30.81 0.00 5.28
160 161 0.753111 ACCTGTATACGACCCGGGTC 60.753 60.000 39.19 39.19 41.40 4.46
168 169 4.185059 GACCCGGGTCGTACGAGC 62.185 72.222 36.87 33.35 41.42 5.03
172 173 4.764336 CGGGTCGTACGAGCGCAA 62.764 66.667 33.43 4.67 42.90 4.85
173 174 2.431260 GGGTCGTACGAGCGCAAA 60.431 61.111 33.43 3.91 42.90 3.68
174 175 2.723719 GGGTCGTACGAGCGCAAAC 61.724 63.158 33.43 19.80 42.90 2.93
175 176 1.731969 GGTCGTACGAGCGCAAACT 60.732 57.895 29.11 0.00 32.85 2.66
176 177 1.411089 GTCGTACGAGCGCAAACTG 59.589 57.895 20.18 0.00 0.00 3.16
177 178 1.731613 TCGTACGAGCGCAAACTGG 60.732 57.895 15.28 0.00 0.00 4.00
178 179 1.731613 CGTACGAGCGCAAACTGGA 60.732 57.895 10.44 0.00 0.00 3.86
179 180 1.674611 CGTACGAGCGCAAACTGGAG 61.675 60.000 10.44 0.00 0.00 3.86
180 181 0.388134 GTACGAGCGCAAACTGGAGA 60.388 55.000 11.47 0.00 0.00 3.71
181 182 0.388134 TACGAGCGCAAACTGGAGAC 60.388 55.000 11.47 0.00 0.00 3.36
182 183 2.383527 CGAGCGCAAACTGGAGACC 61.384 63.158 11.47 0.00 0.00 3.85
183 184 2.032681 AGCGCAAACTGGAGACCC 59.967 61.111 11.47 0.00 0.00 4.46
184 185 2.032681 GCGCAAACTGGAGACCCT 59.967 61.111 0.30 0.00 0.00 4.34
185 186 2.035442 GCGCAAACTGGAGACCCTC 61.035 63.158 0.30 0.00 0.00 4.30
194 195 4.056805 GAGACCCTCCTCCATGCA 57.943 61.111 0.00 0.00 0.00 3.96
195 196 2.537600 GAGACCCTCCTCCATGCAT 58.462 57.895 0.00 0.00 0.00 3.96
196 197 0.108207 GAGACCCTCCTCCATGCATG 59.892 60.000 20.19 20.19 0.00 4.06
197 198 0.326904 AGACCCTCCTCCATGCATGA 60.327 55.000 28.31 12.81 0.00 3.07
198 199 0.179034 GACCCTCCTCCATGCATGAC 60.179 60.000 28.31 4.12 0.00 3.06
199 200 0.915872 ACCCTCCTCCATGCATGACA 60.916 55.000 28.31 12.77 0.00 3.58
200 201 0.465097 CCCTCCTCCATGCATGACAC 60.465 60.000 28.31 0.00 0.00 3.67
201 202 0.812811 CCTCCTCCATGCATGACACG 60.813 60.000 28.31 11.20 0.00 4.49
202 203 0.107993 CTCCTCCATGCATGACACGT 60.108 55.000 28.31 0.00 0.00 4.49
203 204 1.136891 CTCCTCCATGCATGACACGTA 59.863 52.381 28.31 7.19 0.00 3.57
204 205 1.136891 TCCTCCATGCATGACACGTAG 59.863 52.381 28.31 13.52 0.00 3.51
205 206 0.933097 CTCCATGCATGACACGTAGC 59.067 55.000 28.31 0.00 0.00 3.58
206 207 0.248843 TCCATGCATGACACGTAGCA 59.751 50.000 28.31 0.00 41.73 3.49
207 208 1.085893 CCATGCATGACACGTAGCAA 58.914 50.000 28.31 0.00 40.76 3.91
208 209 1.468127 CCATGCATGACACGTAGCAAA 59.532 47.619 28.31 0.00 40.76 3.68
209 210 2.508867 CATGCATGACACGTAGCAAAC 58.491 47.619 22.59 0.00 40.76 2.93
210 211 1.877637 TGCATGACACGTAGCAAACT 58.122 45.000 0.00 0.00 33.48 2.66
211 212 1.530720 TGCATGACACGTAGCAAACTG 59.469 47.619 0.00 0.00 33.48 3.16
212 213 1.798223 GCATGACACGTAGCAAACTGA 59.202 47.619 0.00 0.00 0.00 3.41
213 214 2.223144 GCATGACACGTAGCAAACTGAA 59.777 45.455 0.00 0.00 0.00 3.02
214 215 3.120199 GCATGACACGTAGCAAACTGAAT 60.120 43.478 0.00 0.00 0.00 2.57
215 216 4.641954 CATGACACGTAGCAAACTGAATC 58.358 43.478 0.00 0.00 0.00 2.52
216 217 3.990092 TGACACGTAGCAAACTGAATCT 58.010 40.909 0.00 0.00 0.00 2.40
217 218 3.987868 TGACACGTAGCAAACTGAATCTC 59.012 43.478 0.00 0.00 0.00 2.75
218 219 3.987868 GACACGTAGCAAACTGAATCTCA 59.012 43.478 0.00 0.00 0.00 3.27
219 220 4.377021 ACACGTAGCAAACTGAATCTCAA 58.623 39.130 0.00 0.00 0.00 3.02
220 221 4.814234 ACACGTAGCAAACTGAATCTCAAA 59.186 37.500 0.00 0.00 0.00 2.69
221 222 5.050091 ACACGTAGCAAACTGAATCTCAAAG 60.050 40.000 0.00 0.00 0.00 2.77
222 223 4.083802 ACGTAGCAAACTGAATCTCAAAGC 60.084 41.667 0.00 0.00 0.00 3.51
223 224 4.083855 CGTAGCAAACTGAATCTCAAAGCA 60.084 41.667 0.00 0.00 0.00 3.91
224 225 4.500603 AGCAAACTGAATCTCAAAGCAG 57.499 40.909 0.00 0.00 34.65 4.24
225 226 2.985139 GCAAACTGAATCTCAAAGCAGC 59.015 45.455 0.00 0.00 31.74 5.25
226 227 3.551454 GCAAACTGAATCTCAAAGCAGCA 60.551 43.478 0.00 0.00 31.74 4.41
227 228 4.613944 CAAACTGAATCTCAAAGCAGCAA 58.386 39.130 0.00 0.00 31.74 3.91
228 229 3.911661 ACTGAATCTCAAAGCAGCAAC 57.088 42.857 0.00 0.00 31.74 4.17
229 230 3.216800 ACTGAATCTCAAAGCAGCAACA 58.783 40.909 0.00 0.00 31.74 3.33
230 231 3.004106 ACTGAATCTCAAAGCAGCAACAC 59.996 43.478 0.00 0.00 31.74 3.32
231 232 2.950975 TGAATCTCAAAGCAGCAACACA 59.049 40.909 0.00 0.00 0.00 3.72
232 233 3.004002 TGAATCTCAAAGCAGCAACACAG 59.996 43.478 0.00 0.00 0.00 3.66
233 234 2.042686 TCTCAAAGCAGCAACACAGT 57.957 45.000 0.00 0.00 0.00 3.55
234 235 3.192541 TCTCAAAGCAGCAACACAGTA 57.807 42.857 0.00 0.00 0.00 2.74
235 236 3.133691 TCTCAAAGCAGCAACACAGTAG 58.866 45.455 0.00 0.00 0.00 2.57
236 237 1.603802 TCAAAGCAGCAACACAGTAGC 59.396 47.619 0.00 0.00 0.00 3.58
237 238 0.954452 AAAGCAGCAACACAGTAGCC 59.046 50.000 0.00 0.00 0.00 3.93
238 239 0.179020 AAGCAGCAACACAGTAGCCA 60.179 50.000 0.00 0.00 0.00 4.75
239 240 0.037303 AGCAGCAACACAGTAGCCAT 59.963 50.000 0.00 0.00 0.00 4.40
240 241 1.278985 AGCAGCAACACAGTAGCCATA 59.721 47.619 0.00 0.00 0.00 2.74
241 242 2.083774 GCAGCAACACAGTAGCCATAA 58.916 47.619 0.00 0.00 0.00 1.90
242 243 2.684881 GCAGCAACACAGTAGCCATAAT 59.315 45.455 0.00 0.00 0.00 1.28
243 244 3.129287 GCAGCAACACAGTAGCCATAATT 59.871 43.478 0.00 0.00 0.00 1.40
244 245 4.731773 GCAGCAACACAGTAGCCATAATTC 60.732 45.833 0.00 0.00 0.00 2.17
245 246 3.947834 AGCAACACAGTAGCCATAATTCC 59.052 43.478 0.00 0.00 0.00 3.01
246 247 3.066760 GCAACACAGTAGCCATAATTCCC 59.933 47.826 0.00 0.00 0.00 3.97
247 248 3.577805 ACACAGTAGCCATAATTCCCC 57.422 47.619 0.00 0.00 0.00 4.81
248 249 3.123273 ACACAGTAGCCATAATTCCCCT 58.877 45.455 0.00 0.00 0.00 4.79
249 250 3.527665 ACACAGTAGCCATAATTCCCCTT 59.472 43.478 0.00 0.00 0.00 3.95
250 251 4.017499 ACACAGTAGCCATAATTCCCCTTT 60.017 41.667 0.00 0.00 0.00 3.11
251 252 4.339247 CACAGTAGCCATAATTCCCCTTTG 59.661 45.833 0.00 0.00 0.00 2.77
252 253 3.319122 CAGTAGCCATAATTCCCCTTTGC 59.681 47.826 0.00 0.00 0.00 3.68
253 254 2.548464 AGCCATAATTCCCCTTTGCA 57.452 45.000 0.00 0.00 0.00 4.08
254 255 2.831565 AGCCATAATTCCCCTTTGCAA 58.168 42.857 0.00 0.00 0.00 4.08
255 256 3.180507 AGCCATAATTCCCCTTTGCAAA 58.819 40.909 12.14 12.14 0.00 3.68
256 257 3.781965 AGCCATAATTCCCCTTTGCAAAT 59.218 39.130 13.23 0.00 0.00 2.32
257 258 4.129380 GCCATAATTCCCCTTTGCAAATC 58.871 43.478 13.23 0.00 0.00 2.17
258 259 4.707105 CCATAATTCCCCTTTGCAAATCC 58.293 43.478 13.23 0.00 0.00 3.01
259 260 4.163839 CCATAATTCCCCTTTGCAAATCCA 59.836 41.667 13.23 0.00 0.00 3.41
260 261 5.339035 CCATAATTCCCCTTTGCAAATCCAA 60.339 40.000 13.23 4.07 0.00 3.53
261 262 3.701205 ATTCCCCTTTGCAAATCCAAC 57.299 42.857 13.23 0.00 0.00 3.77
262 263 0.965439 TCCCCTTTGCAAATCCAACG 59.035 50.000 13.23 0.00 0.00 4.10
263 264 0.678950 CCCCTTTGCAAATCCAACGT 59.321 50.000 13.23 0.00 0.00 3.99
264 265 1.336795 CCCCTTTGCAAATCCAACGTC 60.337 52.381 13.23 0.00 0.00 4.34
265 266 1.336795 CCCTTTGCAAATCCAACGTCC 60.337 52.381 13.23 0.00 0.00 4.79
266 267 1.336795 CCTTTGCAAATCCAACGTCCC 60.337 52.381 13.23 0.00 0.00 4.46
267 268 0.676736 TTTGCAAATCCAACGTCCCC 59.323 50.000 8.05 0.00 0.00 4.81
268 269 0.468214 TTGCAAATCCAACGTCCCCA 60.468 50.000 0.00 0.00 0.00 4.96
269 270 0.251564 TGCAAATCCAACGTCCCCAT 60.252 50.000 0.00 0.00 0.00 4.00
270 271 1.004862 TGCAAATCCAACGTCCCCATA 59.995 47.619 0.00 0.00 0.00 2.74
271 272 2.306847 GCAAATCCAACGTCCCCATAT 58.693 47.619 0.00 0.00 0.00 1.78
272 273 2.693074 GCAAATCCAACGTCCCCATATT 59.307 45.455 0.00 0.00 0.00 1.28
273 274 3.243401 GCAAATCCAACGTCCCCATATTC 60.243 47.826 0.00 0.00 0.00 1.75
274 275 2.951229 ATCCAACGTCCCCATATTCC 57.049 50.000 0.00 0.00 0.00 3.01
275 276 1.585895 TCCAACGTCCCCATATTCCA 58.414 50.000 0.00 0.00 0.00 3.53
276 277 1.488812 TCCAACGTCCCCATATTCCAG 59.511 52.381 0.00 0.00 0.00 3.86
277 278 1.308998 CAACGTCCCCATATTCCAGC 58.691 55.000 0.00 0.00 0.00 4.85
278 279 0.182775 AACGTCCCCATATTCCAGCC 59.817 55.000 0.00 0.00 0.00 4.85
279 280 1.301716 CGTCCCCATATTCCAGCCG 60.302 63.158 0.00 0.00 0.00 5.52
280 281 1.600916 GTCCCCATATTCCAGCCGC 60.601 63.158 0.00 0.00 0.00 6.53
281 282 2.282462 CCCCATATTCCAGCCGCC 60.282 66.667 0.00 0.00 0.00 6.13
282 283 2.669569 CCCATATTCCAGCCGCCG 60.670 66.667 0.00 0.00 0.00 6.46
283 284 2.669569 CCATATTCCAGCCGCCGG 60.670 66.667 0.00 0.00 0.00 6.13
284 285 2.111043 CATATTCCAGCCGCCGGT 59.889 61.111 4.45 0.00 0.00 5.28
285 286 2.111043 ATATTCCAGCCGCCGGTG 59.889 61.111 8.42 8.42 37.23 4.94
286 287 2.439960 ATATTCCAGCCGCCGGTGA 61.440 57.895 18.79 0.00 40.02 4.02
287 288 2.383245 ATATTCCAGCCGCCGGTGAG 62.383 60.000 18.79 7.92 40.02 3.51
290 291 4.899239 CCAGCCGCCGGTGAGATC 62.899 72.222 18.79 2.40 40.02 2.75
291 292 4.899239 CAGCCGCCGGTGAGATCC 62.899 72.222 18.79 0.00 40.02 3.36
298 299 4.227134 CGGTGAGATCCGCCCCAG 62.227 72.222 7.84 0.00 43.96 4.45
299 300 4.554036 GGTGAGATCCGCCCCAGC 62.554 72.222 3.17 0.00 39.55 4.85
300 301 3.474570 GTGAGATCCGCCCCAGCT 61.475 66.667 0.00 0.00 36.60 4.24
301 302 3.473647 TGAGATCCGCCCCAGCTG 61.474 66.667 6.78 6.78 36.60 4.24
302 303 4.925861 GAGATCCGCCCCAGCTGC 62.926 72.222 8.66 0.00 36.60 5.25
304 305 4.925861 GATCCGCCCCAGCTGCTC 62.926 72.222 8.66 0.00 36.60 4.26
332 333 3.506096 CCGTGCTCCTCGACGCTA 61.506 66.667 0.00 0.00 34.18 4.26
333 334 2.023461 CGTGCTCCTCGACGCTAG 59.977 66.667 0.00 0.00 0.00 3.42
334 335 2.409651 GTGCTCCTCGACGCTAGG 59.590 66.667 0.00 0.00 35.26 3.02
335 336 3.518998 TGCTCCTCGACGCTAGGC 61.519 66.667 0.00 0.00 33.84 3.93
346 347 3.081409 GCTAGGCGGAACTCCCCA 61.081 66.667 0.00 0.00 30.33 4.96
347 348 3.095347 GCTAGGCGGAACTCCCCAG 62.095 68.421 0.00 3.68 30.33 4.45
348 349 3.081409 TAGGCGGAACTCCCCAGC 61.081 66.667 6.18 0.00 30.33 4.85
349 350 3.618855 TAGGCGGAACTCCCCAGCT 62.619 63.158 6.18 0.00 30.33 4.24
350 351 2.232892 TAGGCGGAACTCCCCAGCTA 62.233 60.000 0.00 0.00 30.33 3.32
351 352 2.501610 GCGGAACTCCCCAGCTAG 59.498 66.667 0.00 0.00 0.00 3.42
352 353 3.095347 GCGGAACTCCCCAGCTAGG 62.095 68.421 0.00 0.00 37.03 3.02
353 354 2.911928 GGAACTCCCCAGCTAGGC 59.088 66.667 0.00 0.00 35.39 3.93
354 355 2.501610 GAACTCCCCAGCTAGGCG 59.498 66.667 0.00 0.00 35.39 5.52
355 356 2.038975 AACTCCCCAGCTAGGCGA 59.961 61.111 0.00 0.00 35.39 5.54
356 357 2.022240 GAACTCCCCAGCTAGGCGAG 62.022 65.000 12.74 12.74 35.39 5.03
366 367 1.369321 CTAGGCGAGCTTCATCCCC 59.631 63.158 0.00 0.00 0.00 4.81
367 368 2.427540 CTAGGCGAGCTTCATCCCCG 62.428 65.000 0.00 0.00 0.00 5.73
371 372 4.918201 GAGCTTCATCCCCGCCGG 62.918 72.222 0.00 0.00 0.00 6.13
374 375 4.794648 CTTCATCCCCGCCGGCAA 62.795 66.667 28.98 10.28 0.00 4.52
375 376 4.794648 TTCATCCCCGCCGGCAAG 62.795 66.667 28.98 17.33 0.00 4.01
384 385 4.699522 GCCGGCAAGGACCTCGTT 62.700 66.667 24.80 0.00 45.00 3.85
385 386 2.032071 CCGGCAAGGACCTCGTTT 59.968 61.111 0.00 0.00 45.00 3.60
386 387 2.325082 CCGGCAAGGACCTCGTTTG 61.325 63.158 0.00 0.00 45.00 2.93
387 388 1.597027 CGGCAAGGACCTCGTTTGT 60.597 57.895 0.00 0.00 0.00 2.83
388 389 1.164041 CGGCAAGGACCTCGTTTGTT 61.164 55.000 0.00 0.00 0.00 2.83
389 390 0.310854 GGCAAGGACCTCGTTTGTTG 59.689 55.000 0.00 0.00 0.00 3.33
390 391 0.310854 GCAAGGACCTCGTTTGTTGG 59.689 55.000 0.00 0.00 0.00 3.77
391 392 0.310854 CAAGGACCTCGTTTGTTGGC 59.689 55.000 0.00 0.00 0.00 4.52
392 393 1.164041 AAGGACCTCGTTTGTTGGCG 61.164 55.000 0.00 0.00 0.00 5.69
393 394 2.613506 GGACCTCGTTTGTTGGCGG 61.614 63.158 0.00 0.00 0.00 6.13
394 395 3.249973 GACCTCGTTTGTTGGCGGC 62.250 63.158 0.00 0.00 0.00 6.53
395 396 4.038080 CCTCGTTTGTTGGCGGCC 62.038 66.667 13.32 13.32 0.00 6.13
396 397 4.038080 CTCGTTTGTTGGCGGCCC 62.038 66.667 17.97 1.91 0.00 5.80
424 425 4.832608 CCCGCCCTTAGTCGCCAC 62.833 72.222 0.00 0.00 0.00 5.01
425 426 4.077184 CCGCCCTTAGTCGCCACA 62.077 66.667 0.00 0.00 0.00 4.17
426 427 2.186903 CGCCCTTAGTCGCCACAT 59.813 61.111 0.00 0.00 0.00 3.21
427 428 1.883084 CGCCCTTAGTCGCCACATC 60.883 63.158 0.00 0.00 0.00 3.06
428 429 1.523938 GCCCTTAGTCGCCACATCC 60.524 63.158 0.00 0.00 0.00 3.51
429 430 1.227263 CCCTTAGTCGCCACATCCG 60.227 63.158 0.00 0.00 0.00 4.18
430 431 1.883084 CCTTAGTCGCCACATCCGC 60.883 63.158 0.00 0.00 0.00 5.54
431 432 1.883084 CTTAGTCGCCACATCCGCC 60.883 63.158 0.00 0.00 0.00 6.13
432 433 3.379865 TTAGTCGCCACATCCGCCC 62.380 63.158 0.00 0.00 0.00 6.13
447 448 4.785453 CCCACGGGCTTGCTCCTC 62.785 72.222 0.00 0.00 0.00 3.71
448 449 4.020617 CCACGGGCTTGCTCCTCA 62.021 66.667 0.00 0.00 0.00 3.86
449 450 2.032528 CACGGGCTTGCTCCTCAA 59.967 61.111 0.00 0.00 0.00 3.02
450 451 2.032681 ACGGGCTTGCTCCTCAAC 59.967 61.111 0.00 0.00 0.00 3.18
451 452 3.121030 CGGGCTTGCTCCTCAACG 61.121 66.667 0.00 0.00 0.00 4.10
452 453 3.435186 GGGCTTGCTCCTCAACGC 61.435 66.667 0.00 0.00 0.00 4.84
453 454 3.435186 GGCTTGCTCCTCAACGCC 61.435 66.667 0.00 0.00 39.74 5.68
454 455 3.793144 GCTTGCTCCTCAACGCCG 61.793 66.667 0.00 0.00 0.00 6.46
455 456 3.121030 CTTGCTCCTCAACGCCGG 61.121 66.667 0.00 0.00 0.00 6.13
456 457 4.697756 TTGCTCCTCAACGCCGGG 62.698 66.667 2.18 0.00 0.00 5.73
462 463 4.323477 CTCAACGCCGGGGGACAA 62.323 66.667 23.83 4.29 0.00 3.18
463 464 4.629523 TCAACGCCGGGGGACAAC 62.630 66.667 23.83 0.00 0.00 3.32
464 465 4.636435 CAACGCCGGGGGACAACT 62.636 66.667 23.83 0.00 0.00 3.16
465 466 4.324991 AACGCCGGGGGACAACTC 62.325 66.667 23.83 0.00 0.00 3.01
475 476 3.700198 GGACAACTCCCTTGTTCGT 57.300 52.632 0.00 0.00 43.60 3.85
476 477 1.226746 GGACAACTCCCTTGTTCGTG 58.773 55.000 0.00 0.00 43.60 4.35
477 478 0.586802 GACAACTCCCTTGTTCGTGC 59.413 55.000 0.00 0.00 43.60 5.34
478 479 0.180406 ACAACTCCCTTGTTCGTGCT 59.820 50.000 0.00 0.00 40.45 4.40
479 480 0.588252 CAACTCCCTTGTTCGTGCTG 59.412 55.000 0.00 0.00 0.00 4.41
480 481 1.166531 AACTCCCTTGTTCGTGCTGC 61.167 55.000 0.00 0.00 0.00 5.25
481 482 1.302033 CTCCCTTGTTCGTGCTGCT 60.302 57.895 0.00 0.00 0.00 4.24
482 483 1.294659 CTCCCTTGTTCGTGCTGCTC 61.295 60.000 0.00 0.00 0.00 4.26
483 484 2.328099 CCCTTGTTCGTGCTGCTCC 61.328 63.158 0.00 0.00 0.00 4.70
484 485 1.597854 CCTTGTTCGTGCTGCTCCA 60.598 57.895 0.00 0.00 0.00 3.86
485 486 0.957395 CCTTGTTCGTGCTGCTCCAT 60.957 55.000 0.00 0.00 0.00 3.41
486 487 0.445436 CTTGTTCGTGCTGCTCCATC 59.555 55.000 0.00 0.00 0.00 3.51
487 488 0.955428 TTGTTCGTGCTGCTCCATCC 60.955 55.000 0.00 0.00 0.00 3.51
488 489 2.109126 GTTCGTGCTGCTCCATCCC 61.109 63.158 0.00 0.00 0.00 3.85
489 490 3.329542 TTCGTGCTGCTCCATCCCC 62.330 63.158 0.00 0.00 0.00 4.81
490 491 4.100084 CGTGCTGCTCCATCCCCA 62.100 66.667 0.00 0.00 0.00 4.96
491 492 2.439156 GTGCTGCTCCATCCCCAC 60.439 66.667 0.00 0.00 0.00 4.61
492 493 3.731728 TGCTGCTCCATCCCCACC 61.732 66.667 0.00 0.00 0.00 4.61
493 494 4.864334 GCTGCTCCATCCCCACCG 62.864 72.222 0.00 0.00 0.00 4.94
494 495 4.181010 CTGCTCCATCCCCACCGG 62.181 72.222 0.00 0.00 0.00 5.28
496 497 3.407967 GCTCCATCCCCACCGGAA 61.408 66.667 9.46 0.00 46.47 4.30
497 498 2.911143 CTCCATCCCCACCGGAAG 59.089 66.667 9.46 0.00 46.47 3.46
498 499 1.689233 CTCCATCCCCACCGGAAGA 60.689 63.158 9.46 0.00 46.47 2.87
499 500 1.689233 TCCATCCCCACCGGAAGAG 60.689 63.158 9.46 0.00 46.47 2.85
500 501 2.746375 CCATCCCCACCGGAAGAGG 61.746 68.421 9.46 4.00 46.47 3.69
501 502 3.090532 ATCCCCACCGGAAGAGGC 61.091 66.667 9.46 0.00 46.47 4.70
504 505 4.410400 CCCACCGGAAGAGGCCAC 62.410 72.222 9.46 0.00 33.69 5.01
505 506 3.636231 CCACCGGAAGAGGCCACA 61.636 66.667 9.46 0.00 33.69 4.17
506 507 2.671070 CACCGGAAGAGGCCACAT 59.329 61.111 9.46 0.00 33.69 3.21
507 508 1.002134 CACCGGAAGAGGCCACATT 60.002 57.895 9.46 0.00 33.69 2.71
508 509 1.026718 CACCGGAAGAGGCCACATTC 61.027 60.000 9.46 5.74 33.69 2.67
509 510 1.815421 CCGGAAGAGGCCACATTCG 60.815 63.158 5.01 1.23 0.00 3.34
510 511 1.079127 CGGAAGAGGCCACATTCGT 60.079 57.895 5.01 0.00 0.00 3.85
511 512 1.084370 CGGAAGAGGCCACATTCGTC 61.084 60.000 5.01 0.70 0.00 4.20
512 513 1.084370 GGAAGAGGCCACATTCGTCG 61.084 60.000 5.01 0.00 0.00 5.12
513 514 0.108804 GAAGAGGCCACATTCGTCGA 60.109 55.000 5.01 0.00 0.00 4.20
514 515 0.537188 AAGAGGCCACATTCGTCGAT 59.463 50.000 5.01 0.00 0.00 3.59
515 516 0.179100 AGAGGCCACATTCGTCGATG 60.179 55.000 5.01 0.00 0.00 3.84
516 517 1.153369 AGGCCACATTCGTCGATGG 60.153 57.895 5.01 8.69 35.17 3.51
517 518 1.449601 GGCCACATTCGTCGATGGT 60.450 57.895 13.47 4.66 34.50 3.55
518 519 1.429148 GGCCACATTCGTCGATGGTC 61.429 60.000 13.47 8.44 34.50 4.02
519 520 1.429148 GCCACATTCGTCGATGGTCC 61.429 60.000 13.47 0.00 34.50 4.46
520 521 0.108377 CCACATTCGTCGATGGTCCA 60.108 55.000 4.48 0.00 0.00 4.02
521 522 1.280982 CACATTCGTCGATGGTCCAG 58.719 55.000 4.48 0.00 0.00 3.86
522 523 0.460284 ACATTCGTCGATGGTCCAGC 60.460 55.000 4.48 0.00 0.00 4.85
523 524 0.179100 CATTCGTCGATGGTCCAGCT 60.179 55.000 5.42 0.00 0.00 4.24
524 525 0.103208 ATTCGTCGATGGTCCAGCTC 59.897 55.000 5.42 0.00 0.00 4.09
525 526 2.266376 TTCGTCGATGGTCCAGCTCG 62.266 60.000 5.42 7.05 0.00 5.03
526 527 2.583593 GTCGATGGTCCAGCTCGC 60.584 66.667 9.60 2.71 32.62 5.03
527 528 4.193334 TCGATGGTCCAGCTCGCG 62.193 66.667 9.60 0.00 32.62 5.87
539 540 4.680237 CTCGCGGCACTGTCCCAA 62.680 66.667 6.13 0.00 0.00 4.12
540 541 4.980805 TCGCGGCACTGTCCCAAC 62.981 66.667 6.13 0.00 0.00 3.77
541 542 4.988598 CGCGGCACTGTCCCAACT 62.989 66.667 0.00 0.00 0.00 3.16
542 543 3.357079 GCGGCACTGTCCCAACTG 61.357 66.667 0.00 0.00 0.00 3.16
543 544 3.357079 CGGCACTGTCCCAACTGC 61.357 66.667 0.00 0.00 0.00 4.40
544 545 2.113986 GGCACTGTCCCAACTGCT 59.886 61.111 0.00 0.00 29.74 4.24
545 546 2.263741 GGCACTGTCCCAACTGCTG 61.264 63.158 0.00 0.00 29.74 4.41
546 547 2.263741 GCACTGTCCCAACTGCTGG 61.264 63.158 0.00 0.00 45.97 4.85
547 548 1.149174 CACTGTCCCAACTGCTGGT 59.851 57.895 0.00 0.00 44.76 4.00
548 549 0.886490 CACTGTCCCAACTGCTGGTC 60.886 60.000 0.00 0.00 44.76 4.02
549 550 1.056700 ACTGTCCCAACTGCTGGTCT 61.057 55.000 0.00 0.00 44.76 3.85
550 551 0.321122 CTGTCCCAACTGCTGGTCTC 60.321 60.000 0.00 0.00 44.76 3.36
551 552 1.003233 GTCCCAACTGCTGGTCTCC 60.003 63.158 0.00 0.00 44.76 3.71
552 553 2.224159 TCCCAACTGCTGGTCTCCC 61.224 63.158 0.00 0.00 44.76 4.30
553 554 2.227036 CCCAACTGCTGGTCTCCCT 61.227 63.158 0.00 0.00 44.76 4.20
554 555 1.763770 CCAACTGCTGGTCTCCCTT 59.236 57.895 0.00 0.00 40.78 3.95
555 556 0.607489 CCAACTGCTGGTCTCCCTTG 60.607 60.000 0.00 0.00 40.78 3.61
556 557 0.109342 CAACTGCTGGTCTCCCTTGT 59.891 55.000 0.00 0.00 0.00 3.16
557 558 0.109342 AACTGCTGGTCTCCCTTGTG 59.891 55.000 0.00 0.00 0.00 3.33
558 559 1.673665 CTGCTGGTCTCCCTTGTGC 60.674 63.158 0.00 0.00 0.00 4.57
559 560 2.121992 CTGCTGGTCTCCCTTGTGCT 62.122 60.000 0.00 0.00 0.00 4.40
560 561 1.673665 GCTGGTCTCCCTTGTGCTG 60.674 63.158 0.00 0.00 0.00 4.41
561 562 1.673665 CTGGTCTCCCTTGTGCTGC 60.674 63.158 0.00 0.00 0.00 5.25
562 563 2.121992 CTGGTCTCCCTTGTGCTGCT 62.122 60.000 0.00 0.00 0.00 4.24
563 564 1.073897 GGTCTCCCTTGTGCTGCTT 59.926 57.895 0.00 0.00 0.00 3.91
564 565 0.538287 GGTCTCCCTTGTGCTGCTTT 60.538 55.000 0.00 0.00 0.00 3.51
565 566 0.595095 GTCTCCCTTGTGCTGCTTTG 59.405 55.000 0.00 0.00 0.00 2.77
566 567 0.473755 TCTCCCTTGTGCTGCTTTGA 59.526 50.000 0.00 0.00 0.00 2.69
567 568 0.879765 CTCCCTTGTGCTGCTTTGAG 59.120 55.000 0.00 0.00 0.00 3.02
568 569 0.473755 TCCCTTGTGCTGCTTTGAGA 59.526 50.000 0.00 0.00 0.00 3.27
569 570 1.074405 TCCCTTGTGCTGCTTTGAGAT 59.926 47.619 0.00 0.00 0.00 2.75
570 571 1.891150 CCCTTGTGCTGCTTTGAGATT 59.109 47.619 0.00 0.00 0.00 2.40
571 572 2.094854 CCCTTGTGCTGCTTTGAGATTC 60.095 50.000 0.00 0.00 0.00 2.52
572 573 2.413765 CCTTGTGCTGCTTTGAGATTCG 60.414 50.000 0.00 0.00 0.00 3.34
573 574 1.159285 TGTGCTGCTTTGAGATTCGG 58.841 50.000 0.00 0.00 0.00 4.30
574 575 1.160137 GTGCTGCTTTGAGATTCGGT 58.840 50.000 0.00 0.00 0.00 4.69
575 576 1.537202 GTGCTGCTTTGAGATTCGGTT 59.463 47.619 0.00 0.00 0.00 4.44
576 577 2.030805 GTGCTGCTTTGAGATTCGGTTT 60.031 45.455 0.00 0.00 0.00 3.27
577 578 2.030893 TGCTGCTTTGAGATTCGGTTTG 60.031 45.455 0.00 0.00 0.00 2.93
578 579 2.030805 GCTGCTTTGAGATTCGGTTTGT 60.031 45.455 0.00 0.00 0.00 2.83
579 580 3.814945 CTGCTTTGAGATTCGGTTTGTC 58.185 45.455 0.00 0.00 0.00 3.18
580 581 3.210227 TGCTTTGAGATTCGGTTTGTCA 58.790 40.909 0.00 0.00 0.00 3.58
581 582 3.250762 TGCTTTGAGATTCGGTTTGTCAG 59.749 43.478 0.00 0.00 0.00 3.51
582 583 3.498397 GCTTTGAGATTCGGTTTGTCAGA 59.502 43.478 0.00 0.00 0.00 3.27
583 584 4.154918 GCTTTGAGATTCGGTTTGTCAGAT 59.845 41.667 0.00 0.00 0.00 2.90
584 585 5.611796 TTTGAGATTCGGTTTGTCAGATG 57.388 39.130 0.00 0.00 0.00 2.90
585 586 4.271696 TGAGATTCGGTTTGTCAGATGT 57.728 40.909 0.00 0.00 0.00 3.06
586 587 4.245660 TGAGATTCGGTTTGTCAGATGTC 58.754 43.478 0.00 0.00 0.00 3.06
587 588 4.245660 GAGATTCGGTTTGTCAGATGTCA 58.754 43.478 0.00 0.00 0.00 3.58
588 589 4.836825 AGATTCGGTTTGTCAGATGTCAT 58.163 39.130 0.00 0.00 0.00 3.06
589 590 4.633126 AGATTCGGTTTGTCAGATGTCATG 59.367 41.667 0.00 0.00 0.00 3.07
590 591 2.076100 TCGGTTTGTCAGATGTCATGC 58.924 47.619 0.00 0.00 0.00 4.06
591 592 1.201954 CGGTTTGTCAGATGTCATGCG 60.202 52.381 0.00 0.00 0.00 4.73
592 593 1.806542 GGTTTGTCAGATGTCATGCGT 59.193 47.619 0.00 0.00 0.00 5.24
593 594 2.413239 GGTTTGTCAGATGTCATGCGTG 60.413 50.000 0.00 0.00 0.00 5.34
594 595 1.441738 TTGTCAGATGTCATGCGTGG 58.558 50.000 5.98 0.00 0.00 4.94
595 596 0.607620 TGTCAGATGTCATGCGTGGA 59.392 50.000 5.98 0.00 0.00 4.02
596 597 1.207811 TGTCAGATGTCATGCGTGGAT 59.792 47.619 5.98 0.00 0.00 3.41
597 598 2.430332 TGTCAGATGTCATGCGTGGATA 59.570 45.455 5.98 0.00 0.00 2.59
598 599 3.118811 TGTCAGATGTCATGCGTGGATAA 60.119 43.478 5.98 0.00 0.00 1.75
599 600 3.492383 GTCAGATGTCATGCGTGGATAAG 59.508 47.826 5.98 0.00 0.00 1.73
600 601 2.804527 CAGATGTCATGCGTGGATAAGG 59.195 50.000 5.98 0.00 0.00 2.69
601 602 2.146342 GATGTCATGCGTGGATAAGGG 58.854 52.381 5.98 0.00 0.00 3.95
602 603 0.908910 TGTCATGCGTGGATAAGGGT 59.091 50.000 5.98 0.00 0.00 4.34
603 604 1.134521 TGTCATGCGTGGATAAGGGTC 60.135 52.381 5.98 0.00 0.00 4.46
604 605 1.139058 GTCATGCGTGGATAAGGGTCT 59.861 52.381 5.98 0.00 0.00 3.85
605 606 1.412710 TCATGCGTGGATAAGGGTCTC 59.587 52.381 5.98 0.00 0.00 3.36
606 607 0.759346 ATGCGTGGATAAGGGTCTCC 59.241 55.000 0.00 0.00 0.00 3.71
607 608 0.616395 TGCGTGGATAAGGGTCTCCA 60.616 55.000 0.00 0.00 39.23 3.86
608 609 0.105039 GCGTGGATAAGGGTCTCCAG 59.895 60.000 0.00 0.00 42.10 3.86
609 610 1.486211 CGTGGATAAGGGTCTCCAGT 58.514 55.000 0.00 0.00 42.10 4.00
610 611 1.831736 CGTGGATAAGGGTCTCCAGTT 59.168 52.381 0.00 0.00 42.10 3.16
611 612 2.236395 CGTGGATAAGGGTCTCCAGTTT 59.764 50.000 0.00 0.00 42.10 2.66
612 613 3.610911 GTGGATAAGGGTCTCCAGTTTG 58.389 50.000 0.00 0.00 42.10 2.93
613 614 2.026262 TGGATAAGGGTCTCCAGTTTGC 60.026 50.000 0.00 0.00 36.63 3.68
614 615 2.280628 GATAAGGGTCTCCAGTTTGCG 58.719 52.381 0.00 0.00 34.83 4.85
615 616 1.053424 TAAGGGTCTCCAGTTTGCGT 58.947 50.000 0.00 0.00 34.83 5.24
616 617 0.182775 AAGGGTCTCCAGTTTGCGTT 59.817 50.000 0.00 0.00 34.83 4.84
617 618 0.250338 AGGGTCTCCAGTTTGCGTTC 60.250 55.000 0.00 0.00 34.83 3.95
618 619 1.566018 GGGTCTCCAGTTTGCGTTCG 61.566 60.000 0.00 0.00 0.00 3.95
619 620 0.878961 GGTCTCCAGTTTGCGTTCGT 60.879 55.000 0.00 0.00 0.00 3.85
620 621 1.603678 GGTCTCCAGTTTGCGTTCGTA 60.604 52.381 0.00 0.00 0.00 3.43
621 622 1.454653 GTCTCCAGTTTGCGTTCGTAC 59.545 52.381 0.00 0.00 0.00 3.67
668 669 8.770850 TTTTTCCTAATAAAACGAACACGAAG 57.229 30.769 0.00 0.00 0.00 3.79
689 690 8.004585 CGAAGTGACTCGTAAAATTTACTTCT 57.995 34.615 17.58 0.00 40.12 2.85
690 691 8.154666 CGAAGTGACTCGTAAAATTTACTTCTC 58.845 37.037 17.58 8.06 40.12 2.87
691 692 8.882415 AAGTGACTCGTAAAATTTACTTCTCA 57.118 30.769 13.24 7.83 0.00 3.27
692 693 8.295569 AGTGACTCGTAAAATTTACTTCTCAC 57.704 34.615 18.64 18.64 0.00 3.51
693 694 7.924412 AGTGACTCGTAAAATTTACTTCTCACA 59.076 33.333 23.31 12.22 0.00 3.58
694 695 8.545420 GTGACTCGTAAAATTTACTTCTCACAA 58.455 33.333 20.00 0.70 0.00 3.33
695 696 9.100554 TGACTCGTAAAATTTACTTCTCACAAA 57.899 29.630 13.24 0.00 0.00 2.83
696 697 9.925268 GACTCGTAAAATTTACTTCTCACAAAA 57.075 29.630 13.24 0.00 0.00 2.44
715 716 7.471657 ACAAAAAGTGAAAAAGTGAAACGTT 57.528 28.000 0.00 0.00 45.86 3.99
716 717 7.560700 ACAAAAAGTGAAAAAGTGAAACGTTC 58.439 30.769 0.00 0.00 45.86 3.95
717 718 7.222999 ACAAAAAGTGAAAAAGTGAAACGTTCA 59.777 29.630 0.00 0.00 45.86 3.18
799 800 7.595819 AATAAAGGACTGTGAAAATGAACCA 57.404 32.000 0.00 0.00 0.00 3.67
1118 1120 0.096628 CTTACCTCGTGTCTCGGTCG 59.903 60.000 0.00 0.00 40.32 4.79
1271 1274 2.203983 TGCTCTGCCTGGGGAAGA 60.204 61.111 0.00 0.00 0.00 2.87
1400 1404 4.081365 TGAAGTATGGTTAGTGAATCGCCA 60.081 41.667 0.00 0.00 0.00 5.69
1446 1450 3.815856 ATGTCTCACTATGCAGTCTGG 57.184 47.619 1.14 0.00 30.46 3.86
1478 1482 3.575256 TCAGATTCAGGTGCTGCATTTTT 59.425 39.130 5.27 0.00 0.00 1.94
1546 1550 3.576982 GGGTCGGTTATGATCATGTCCTA 59.423 47.826 18.72 9.31 0.00 2.94
1587 1591 6.475402 GCACTGCTGTTTAACATTTTGTAGTT 59.525 34.615 0.00 0.00 0.00 2.24
1588 1592 7.515059 GCACTGCTGTTTAACATTTTGTAGTTG 60.515 37.037 0.00 0.02 0.00 3.16
1589 1593 7.700234 CACTGCTGTTTAACATTTTGTAGTTGA 59.300 33.333 0.00 0.00 0.00 3.18
1590 1594 8.413229 ACTGCTGTTTAACATTTTGTAGTTGAT 58.587 29.630 0.00 0.00 0.00 2.57
1591 1595 9.248291 CTGCTGTTTAACATTTTGTAGTTGATT 57.752 29.630 0.00 0.00 0.00 2.57
1592 1596 9.593134 TGCTGTTTAACATTTTGTAGTTGATTT 57.407 25.926 0.00 0.00 0.00 2.17
1600 1604 8.970691 ACATTTTGTAGTTGATTTACATGCTC 57.029 30.769 0.00 0.00 31.60 4.26
1601 1605 8.796475 ACATTTTGTAGTTGATTTACATGCTCT 58.204 29.630 0.00 0.00 31.60 4.09
1602 1606 9.069078 CATTTTGTAGTTGATTTACATGCTCTG 57.931 33.333 0.00 0.00 31.60 3.35
1603 1607 7.744087 TTTGTAGTTGATTTACATGCTCTGT 57.256 32.000 0.00 0.00 42.13 3.41
1604 1608 7.744087 TTGTAGTTGATTTACATGCTCTGTT 57.256 32.000 0.00 0.00 39.39 3.16
1605 1609 7.132694 TGTAGTTGATTTACATGCTCTGTTG 57.867 36.000 0.00 0.00 39.39 3.33
1606 1610 6.710295 TGTAGTTGATTTACATGCTCTGTTGT 59.290 34.615 0.00 0.00 39.39 3.32
1607 1611 6.639632 AGTTGATTTACATGCTCTGTTGTT 57.360 33.333 0.00 0.00 39.39 2.83
1608 1612 7.042797 AGTTGATTTACATGCTCTGTTGTTT 57.957 32.000 0.00 0.00 39.39 2.83
1609 1613 8.165239 AGTTGATTTACATGCTCTGTTGTTTA 57.835 30.769 0.00 0.00 39.39 2.01
1610 1614 8.629158 AGTTGATTTACATGCTCTGTTGTTTAA 58.371 29.630 0.00 0.00 39.39 1.52
1611 1615 8.690840 GTTGATTTACATGCTCTGTTGTTTAAC 58.309 33.333 0.00 0.00 39.39 2.01
1612 1616 7.935520 TGATTTACATGCTCTGTTGTTTAACA 58.064 30.769 0.00 0.00 44.17 2.41
1613 1617 8.575589 TGATTTACATGCTCTGTTGTTTAACAT 58.424 29.630 0.00 0.00 45.16 2.71
1614 1618 9.410556 GATTTACATGCTCTGTTGTTTAACATT 57.589 29.630 0.00 0.00 45.16 2.71
1615 1619 9.762933 ATTTACATGCTCTGTTGTTTAACATTT 57.237 25.926 0.00 0.00 45.16 2.32
1616 1620 9.593134 TTTACATGCTCTGTTGTTTAACATTTT 57.407 25.926 0.00 0.00 45.16 1.82
1617 1621 7.467557 ACATGCTCTGTTGTTTAACATTTTG 57.532 32.000 0.00 0.00 45.16 2.44
1618 1622 7.041107 ACATGCTCTGTTGTTTAACATTTTGT 58.959 30.769 0.00 0.00 45.16 2.83
1619 1623 8.194104 ACATGCTCTGTTGTTTAACATTTTGTA 58.806 29.630 0.00 0.00 45.16 2.41
1620 1624 8.693504 CATGCTCTGTTGTTTAACATTTTGTAG 58.306 33.333 0.00 0.00 45.16 2.74
1621 1625 7.767261 TGCTCTGTTGTTTAACATTTTGTAGT 58.233 30.769 0.00 0.00 45.16 2.73
1657 1661 2.158769 TGTTGTTGATGGCTCTGACTGT 60.159 45.455 0.00 0.00 0.00 3.55
1851 1855 3.173151 TCTGAATGCTTCCTACCTGTCA 58.827 45.455 0.00 0.00 0.00 3.58
2144 2148 7.703058 ATCAGTTTCCCCTTAACTACAATTG 57.297 36.000 3.24 3.24 34.22 2.32
2236 2241 0.184692 TGTGGACTGTGATTTGGCCA 59.815 50.000 0.00 0.00 0.00 5.36
2300 2305 3.285484 CATCTGCCATTCTAGCCTTTGT 58.715 45.455 0.00 0.00 0.00 2.83
2393 2398 9.956720 CTTCAGAAGTGATGTTTCTTGTTATTT 57.043 29.630 1.48 0.00 32.75 1.40
2441 2446 3.904136 ATCTTTTCAGCCAGTTCAACG 57.096 42.857 0.00 0.00 0.00 4.10
2560 2565 6.128282 GCTGTACATTGTAGCTTAGCTTGAAA 60.128 38.462 13.44 5.22 40.44 2.69
2566 2571 7.862873 ACATTGTAGCTTAGCTTGAAAGAAAAC 59.137 33.333 13.44 1.22 40.44 2.43
2572 2577 6.042777 GCTTAGCTTGAAAGAAAACCAGTTT 58.957 36.000 0.00 0.00 0.00 2.66
2604 2609 9.802039 AACCCTTTTATTGTGTCTTATTGAGTA 57.198 29.630 0.00 0.00 0.00 2.59
2605 2610 9.975218 ACCCTTTTATTGTGTCTTATTGAGTAT 57.025 29.630 0.00 0.00 0.00 2.12
2659 2664 3.380004 TGTTTCCAGGTAAACAAGCACAG 59.620 43.478 12.31 0.00 44.23 3.66
2664 2669 2.031682 CAGGTAAACAAGCACAGCAGAC 60.032 50.000 0.00 0.00 0.00 3.51
2797 2802 4.447724 ACGCTGATGTATTTTGGCTATACG 59.552 41.667 0.00 0.00 32.38 3.06
2873 2878 5.118990 AGCTGTTAGGTGTGTTGCTATATG 58.881 41.667 0.00 0.00 0.00 1.78
2891 2896 3.939740 ATGCCACATCCTGAATACACT 57.060 42.857 0.00 0.00 0.00 3.55
2914 2919 1.704628 TGGAGGCACCTCATCTTTTGA 59.295 47.619 18.18 0.00 44.40 2.69
2918 2923 4.517285 GAGGCACCTCATCTTTTGACATA 58.483 43.478 11.92 0.00 42.31 2.29
2919 2924 5.121380 AGGCACCTCATCTTTTGACATAT 57.879 39.130 0.00 0.00 0.00 1.78
2920 2925 5.513233 AGGCACCTCATCTTTTGACATATT 58.487 37.500 0.00 0.00 0.00 1.28
2921 2926 6.662755 AGGCACCTCATCTTTTGACATATTA 58.337 36.000 0.00 0.00 0.00 0.98
2923 2928 7.781693 AGGCACCTCATCTTTTGACATATTATT 59.218 33.333 0.00 0.00 0.00 1.40
2924 2929 9.066892 GGCACCTCATCTTTTGACATATTATTA 57.933 33.333 0.00 0.00 0.00 0.98
2980 2988 8.466617 TCTTCTTGTACAGATCTATTACCTCC 57.533 38.462 0.00 0.00 0.00 4.30
3004 3012 7.664731 TCCGTTCCAAAATATTAGTTAACACCA 59.335 33.333 8.61 0.00 0.00 4.17
3069 3077 6.961358 CACAAATGCATGTTTTGTTCATTG 57.039 33.333 19.74 6.54 42.96 2.82
3095 3103 4.906747 TGGGCTAAAAGCATCCAATTTT 57.093 36.364 0.78 0.00 44.75 1.82
3124 3132 8.496707 AAAACATTTGATGCTAATTCCCAATC 57.503 30.769 0.00 0.00 0.00 2.67
3241 3338 3.873910 TCCAGCCTGAACTACTAATTGC 58.126 45.455 0.00 0.00 0.00 3.56
3440 3537 3.753272 GTGATTCACCTGCTCAGCTTAAA 59.247 43.478 5.44 0.00 0.00 1.52
3463 3560 4.284746 AGCATATCTTAGTGGTAAGCCTCC 59.715 45.833 0.00 0.00 36.35 4.30
3500 3597 3.703556 TCATTGGAACCTTCAGTTTTGCA 59.296 39.130 0.00 0.00 39.40 4.08
3504 3601 3.630312 TGGAACCTTCAGTTTTGCACTAC 59.370 43.478 0.00 0.00 39.40 2.73
3518 3615 5.375417 TTGCACTACATTTGGAAGTGATG 57.625 39.130 15.43 0.00 42.59 3.07
3542 3639 5.428496 TTTGTCTCATTTGAACTGCAGAG 57.572 39.130 23.35 4.71 0.00 3.35
3563 3660 2.396590 TCGACCCAAGAATAACAGGC 57.603 50.000 0.00 0.00 0.00 4.85
3569 3666 5.254115 GACCCAAGAATAACAGGCTTAACT 58.746 41.667 0.00 0.00 0.00 2.24
3620 3717 4.558860 GCACAAGAATACCGCATTTTCTTC 59.441 41.667 0.00 0.00 37.55 2.87
3659 3756 9.482627 GAAGTTGGTCAGGATTATATTGTAGAG 57.517 37.037 0.00 0.00 0.00 2.43
3683 3780 7.790027 AGAGTTCTCATAACATGTAAGAGCAT 58.210 34.615 14.10 5.69 0.00 3.79
3698 3795 5.929058 AAGAGCATGTGAGAGTCTTCATA 57.071 39.130 10.14 2.67 0.00 2.15
3705 3802 7.925483 AGCATGTGAGAGTCTTCATATAACTTC 59.075 37.037 10.14 0.00 29.23 3.01
3751 3850 8.688151 AGAACTTGACTGTCTGATTATAGGTAC 58.312 37.037 9.51 0.00 0.00 3.34
3850 3949 1.139853 ACGGAGATCCAGAAAGCATCC 59.860 52.381 0.00 0.00 35.14 3.51
3876 3975 6.531503 TTCAGCAGCAAAGTAGTCTAGTAT 57.468 37.500 0.00 0.00 0.00 2.12
3877 3976 5.895928 TCAGCAGCAAAGTAGTCTAGTATG 58.104 41.667 0.00 0.00 0.00 2.39
3903 4002 5.193679 GCCTGTGGTATACCTCTTGATTTT 58.806 41.667 22.41 0.00 36.82 1.82
3950 4050 9.640963 AATCGAGATATTAAAGCATACCTGTAC 57.359 33.333 0.00 0.00 0.00 2.90
3967 4068 6.735130 ACCTGTACTTTTTGTATTTGCTGAC 58.265 36.000 0.00 0.00 33.23 3.51
3974 4075 8.196802 ACTTTTTGTATTTGCTGACCTTTTTC 57.803 30.769 0.00 0.00 0.00 2.29
4006 4116 6.583050 GGAGTAGCTGCGTACTAATAGATTTG 59.417 42.308 0.00 0.00 33.18 2.32
4057 4167 5.575606 GCAGATGTGATGGTGAAAGAATTTG 59.424 40.000 0.00 0.00 39.27 2.32
4067 4177 6.973843 TGGTGAAAGAATTTGTCTTCTGATG 58.026 36.000 0.00 0.00 46.36 3.07
4088 4198 8.203937 TGATGGTTAATTGGTAATACTTGTCG 57.796 34.615 0.00 0.00 0.00 4.35
4099 4209 5.062308 GGTAATACTTGTCGAGAAGTGCTTG 59.938 44.000 31.71 6.80 36.80 4.01
4101 4211 2.906354 ACTTGTCGAGAAGTGCTTGTT 58.094 42.857 25.47 0.34 34.79 2.83
4105 4215 5.527582 ACTTGTCGAGAAGTGCTTGTTATTT 59.472 36.000 25.47 0.00 34.79 1.40
4106 4216 6.038271 ACTTGTCGAGAAGTGCTTGTTATTTT 59.962 34.615 25.47 0.00 34.79 1.82
4107 4217 7.225931 ACTTGTCGAGAAGTGCTTGTTATTTTA 59.774 33.333 25.47 0.00 34.79 1.52
4170 4280 3.557903 GACCCTGCTGCCAGCTGAA 62.558 63.158 23.28 1.56 41.94 3.02
4171 4281 2.282674 CCCTGCTGCCAGCTGAAA 60.283 61.111 23.28 1.14 41.94 2.69
4172 4282 1.904865 CCCTGCTGCCAGCTGAAAA 60.905 57.895 23.28 0.00 41.94 2.29
4173 4283 1.466025 CCCTGCTGCCAGCTGAAAAA 61.466 55.000 23.28 0.00 41.94 1.94
4215 4326 1.261089 CCAATTTTTGTTGGCAGCGTG 59.739 47.619 0.00 0.00 41.92 5.34
4221 4332 1.634702 TTGTTGGCAGCGTGTTTTTC 58.365 45.000 0.00 0.00 0.00 2.29
4222 4333 0.179124 TGTTGGCAGCGTGTTTTTCC 60.179 50.000 0.00 0.00 0.00 3.13
4308 4427 7.078228 GCAGATTTTTCGTACAATCTTTCTGT 58.922 34.615 1.16 0.00 37.60 3.41
4344 4463 9.593134 AAAATTTCTACTGTGCTGTAGATAGAG 57.407 33.333 16.05 0.00 45.46 2.43
4345 4464 7.889873 ATTTCTACTGTGCTGTAGATAGAGT 57.110 36.000 16.05 0.00 45.46 3.24
4353 4472 4.023963 GTGCTGTAGATAGAGTACGCATCA 60.024 45.833 0.00 0.00 34.68 3.07
4365 4484 4.053983 AGTACGCATCATATTCTGCACAG 58.946 43.478 6.97 0.00 38.30 3.66
4440 4559 3.668596 ACACAGTTTCGCTACAACAAC 57.331 42.857 0.00 0.00 0.00 3.32
4445 4564 5.227184 CACAGTTTCGCTACAACAACTTTTC 59.773 40.000 0.00 0.00 0.00 2.29
4477 4637 1.992277 CCCTACTCCTGTGCAGCCT 60.992 63.158 0.00 0.00 0.00 4.58
4478 4638 1.557269 CCCTACTCCTGTGCAGCCTT 61.557 60.000 0.00 0.00 0.00 4.35
4537 4697 4.197750 CCTTCAAGTGATTCAGGATCCTG 58.802 47.826 32.60 32.60 44.86 3.86
4598 4761 0.603569 AAGTGTAGAGTGCCTCACGG 59.396 55.000 5.21 0.00 39.64 4.94
4599 4762 1.215647 GTGTAGAGTGCCTCACGGG 59.784 63.158 5.21 0.00 39.64 5.28
4600 4763 1.076014 TGTAGAGTGCCTCACGGGA 59.924 57.895 5.21 0.00 39.64 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.435686 AAGTCCAGTTCCAAGCATGTATA 57.564 39.130 0.00 0.00 0.00 1.47
1 2 4.307032 AAGTCCAGTTCCAAGCATGTAT 57.693 40.909 0.00 0.00 0.00 2.29
2 3 3.788227 AAGTCCAGTTCCAAGCATGTA 57.212 42.857 0.00 0.00 0.00 2.29
3 4 2.664402 AAGTCCAGTTCCAAGCATGT 57.336 45.000 0.00 0.00 0.00 3.21
4 5 5.649782 ATAAAAGTCCAGTTCCAAGCATG 57.350 39.130 0.00 0.00 0.00 4.06
5 6 6.670695 AAATAAAAGTCCAGTTCCAAGCAT 57.329 33.333 0.00 0.00 0.00 3.79
6 7 7.775053 ATAAATAAAAGTCCAGTTCCAAGCA 57.225 32.000 0.00 0.00 0.00 3.91
7 8 9.489084 AAAATAAATAAAAGTCCAGTTCCAAGC 57.511 29.630 0.00 0.00 0.00 4.01
31 32 9.225436 TGCTAGTATGTGTCACATTCATAAAAA 57.775 29.630 23.05 0.24 39.88 1.94
32 33 8.664798 GTGCTAGTATGTGTCACATTCATAAAA 58.335 33.333 23.05 1.00 39.88 1.52
33 34 7.821846 TGTGCTAGTATGTGTCACATTCATAAA 59.178 33.333 23.05 1.75 39.88 1.40
34 35 7.277760 GTGTGCTAGTATGTGTCACATTCATAA 59.722 37.037 23.05 2.50 39.88 1.90
35 36 6.756542 GTGTGCTAGTATGTGTCACATTCATA 59.243 38.462 23.05 12.43 39.88 2.15
36 37 5.582269 GTGTGCTAGTATGTGTCACATTCAT 59.418 40.000 23.05 11.99 39.88 2.57
37 38 4.929211 GTGTGCTAGTATGTGTCACATTCA 59.071 41.667 23.05 10.92 39.88 2.57
38 39 4.929211 TGTGTGCTAGTATGTGTCACATTC 59.071 41.667 23.05 17.79 39.88 2.67
39 40 4.690748 GTGTGTGCTAGTATGTGTCACATT 59.309 41.667 23.05 9.38 39.88 2.71
40 41 4.245660 GTGTGTGCTAGTATGTGTCACAT 58.754 43.478 21.70 21.70 42.35 3.21
41 42 3.068873 TGTGTGTGCTAGTATGTGTCACA 59.931 43.478 8.40 8.40 35.57 3.58
42 43 3.649073 TGTGTGTGCTAGTATGTGTCAC 58.351 45.455 0.00 0.00 0.00 3.67
43 44 4.055360 GTTGTGTGTGCTAGTATGTGTCA 58.945 43.478 0.00 0.00 0.00 3.58
44 45 4.307432 AGTTGTGTGTGCTAGTATGTGTC 58.693 43.478 0.00 0.00 0.00 3.67
45 46 4.336889 AGTTGTGTGTGCTAGTATGTGT 57.663 40.909 0.00 0.00 0.00 3.72
46 47 5.709966 TCTAGTTGTGTGTGCTAGTATGTG 58.290 41.667 0.00 0.00 35.14 3.21
47 48 5.977489 TCTAGTTGTGTGTGCTAGTATGT 57.023 39.130 0.00 0.00 35.14 2.29
48 49 7.652300 TTTTCTAGTTGTGTGTGCTAGTATG 57.348 36.000 0.00 0.00 35.14 2.39
49 50 8.721478 CATTTTTCTAGTTGTGTGTGCTAGTAT 58.279 33.333 0.00 0.00 35.14 2.12
50 51 7.929245 TCATTTTTCTAGTTGTGTGTGCTAGTA 59.071 33.333 0.00 0.00 35.14 1.82
51 52 6.765989 TCATTTTTCTAGTTGTGTGTGCTAGT 59.234 34.615 0.00 0.00 35.14 2.57
52 53 7.189693 TCATTTTTCTAGTTGTGTGTGCTAG 57.810 36.000 0.00 0.00 34.96 3.42
53 54 6.204688 CCTCATTTTTCTAGTTGTGTGTGCTA 59.795 38.462 0.00 0.00 0.00 3.49
54 55 5.009010 CCTCATTTTTCTAGTTGTGTGTGCT 59.991 40.000 0.00 0.00 0.00 4.40
55 56 5.008613 TCCTCATTTTTCTAGTTGTGTGTGC 59.991 40.000 0.00 0.00 0.00 4.57
56 57 6.293626 CCTCCTCATTTTTCTAGTTGTGTGTG 60.294 42.308 0.00 0.00 0.00 3.82
57 58 5.765182 CCTCCTCATTTTTCTAGTTGTGTGT 59.235 40.000 0.00 0.00 0.00 3.72
58 59 5.997746 TCCTCCTCATTTTTCTAGTTGTGTG 59.002 40.000 0.00 0.00 0.00 3.82
59 60 6.187727 TCCTCCTCATTTTTCTAGTTGTGT 57.812 37.500 0.00 0.00 0.00 3.72
60 61 7.693969 AATCCTCCTCATTTTTCTAGTTGTG 57.306 36.000 0.00 0.00 0.00 3.33
61 62 7.944554 TCAAATCCTCCTCATTTTTCTAGTTGT 59.055 33.333 0.00 0.00 0.00 3.32
62 63 8.340618 TCAAATCCTCCTCATTTTTCTAGTTG 57.659 34.615 0.00 0.00 0.00 3.16
63 64 8.940397 TTCAAATCCTCCTCATTTTTCTAGTT 57.060 30.769 0.00 0.00 0.00 2.24
64 65 9.539194 AATTCAAATCCTCCTCATTTTTCTAGT 57.461 29.630 0.00 0.00 0.00 2.57
67 68 8.873144 TGAAATTCAAATCCTCCTCATTTTTCT 58.127 29.630 0.00 0.00 0.00 2.52
68 69 9.662947 ATGAAATTCAAATCCTCCTCATTTTTC 57.337 29.630 0.00 0.00 0.00 2.29
69 70 9.444600 CATGAAATTCAAATCCTCCTCATTTTT 57.555 29.630 0.00 0.00 0.00 1.94
70 71 8.044908 CCATGAAATTCAAATCCTCCTCATTTT 58.955 33.333 0.00 0.00 0.00 1.82
71 72 7.400915 TCCATGAAATTCAAATCCTCCTCATTT 59.599 33.333 0.00 0.00 0.00 2.32
72 73 6.899075 TCCATGAAATTCAAATCCTCCTCATT 59.101 34.615 0.00 0.00 0.00 2.57
73 74 6.437755 TCCATGAAATTCAAATCCTCCTCAT 58.562 36.000 0.00 0.00 0.00 2.90
74 75 5.829986 TCCATGAAATTCAAATCCTCCTCA 58.170 37.500 0.00 0.00 0.00 3.86
75 76 6.780457 TTCCATGAAATTCAAATCCTCCTC 57.220 37.500 0.00 0.00 0.00 3.71
76 77 7.130775 AGATTCCATGAAATTCAAATCCTCCT 58.869 34.615 12.63 0.00 27.02 3.69
77 78 7.069085 TGAGATTCCATGAAATTCAAATCCTCC 59.931 37.037 12.63 6.17 27.02 4.30
78 79 8.004087 TGAGATTCCATGAAATTCAAATCCTC 57.996 34.615 12.63 10.64 27.02 3.71
79 80 7.966339 TGAGATTCCATGAAATTCAAATCCT 57.034 32.000 12.63 4.12 27.02 3.24
80 81 9.439500 TTTTGAGATTCCATGAAATTCAAATCC 57.561 29.630 12.63 7.39 37.55 3.01
85 86 9.999660 TCAAATTTTGAGATTCCATGAAATTCA 57.000 25.926 7.74 0.00 34.08 2.57
87 88 9.223099 GGTCAAATTTTGAGATTCCATGAAATT 57.777 29.630 12.02 0.00 41.01 1.82
88 89 8.599792 AGGTCAAATTTTGAGATTCCATGAAAT 58.400 29.630 12.02 0.00 41.01 2.17
89 90 7.965718 AGGTCAAATTTTGAGATTCCATGAAA 58.034 30.769 12.02 0.00 41.01 2.69
90 91 7.543359 AGGTCAAATTTTGAGATTCCATGAA 57.457 32.000 12.02 0.00 41.01 2.57
91 92 8.648698 TTAGGTCAAATTTTGAGATTCCATGA 57.351 30.769 12.02 0.00 41.01 3.07
92 93 9.143631 GTTTAGGTCAAATTTTGAGATTCCATG 57.856 33.333 12.02 0.00 41.01 3.66
93 94 9.093458 AGTTTAGGTCAAATTTTGAGATTCCAT 57.907 29.630 12.02 1.26 41.01 3.41
94 95 8.477419 AGTTTAGGTCAAATTTTGAGATTCCA 57.523 30.769 12.02 0.02 41.01 3.53
95 96 9.841880 GTAGTTTAGGTCAAATTTTGAGATTCC 57.158 33.333 12.02 9.69 41.01 3.01
109 110 8.677300 CCGTGTTATTACTAGTAGTTTAGGTCA 58.323 37.037 8.40 0.00 0.00 4.02
110 111 8.131731 CCCGTGTTATTACTAGTAGTTTAGGTC 58.868 40.741 8.40 0.00 0.00 3.85
111 112 7.834181 TCCCGTGTTATTACTAGTAGTTTAGGT 59.166 37.037 8.40 0.00 0.00 3.08
112 113 8.225603 TCCCGTGTTATTACTAGTAGTTTAGG 57.774 38.462 8.40 3.27 0.00 2.69
115 116 9.777297 TTTTTCCCGTGTTATTACTAGTAGTTT 57.223 29.630 8.40 0.00 0.00 2.66
116 117 9.208022 GTTTTTCCCGTGTTATTACTAGTAGTT 57.792 33.333 8.40 0.00 0.00 2.24
117 118 7.819415 GGTTTTTCCCGTGTTATTACTAGTAGT 59.181 37.037 8.14 8.14 0.00 2.73
118 119 8.037166 AGGTTTTTCCCGTGTTATTACTAGTAG 58.963 37.037 2.23 0.00 36.75 2.57
119 120 7.818930 CAGGTTTTTCCCGTGTTATTACTAGTA 59.181 37.037 0.00 0.00 36.75 1.82
120 121 6.652062 CAGGTTTTTCCCGTGTTATTACTAGT 59.348 38.462 0.00 0.00 36.75 2.57
121 122 6.652062 ACAGGTTTTTCCCGTGTTATTACTAG 59.348 38.462 0.00 0.00 36.75 2.57
122 123 6.532826 ACAGGTTTTTCCCGTGTTATTACTA 58.467 36.000 0.00 0.00 36.75 1.82
123 124 5.379187 ACAGGTTTTTCCCGTGTTATTACT 58.621 37.500 0.00 0.00 36.75 2.24
124 125 5.694231 ACAGGTTTTTCCCGTGTTATTAC 57.306 39.130 0.00 0.00 36.75 1.89
125 126 7.277539 CGTATACAGGTTTTTCCCGTGTTATTA 59.722 37.037 3.32 0.00 36.75 0.98
126 127 6.092533 CGTATACAGGTTTTTCCCGTGTTATT 59.907 38.462 3.32 0.00 36.75 1.40
127 128 5.581874 CGTATACAGGTTTTTCCCGTGTTAT 59.418 40.000 3.32 0.00 36.75 1.89
128 129 4.928615 CGTATACAGGTTTTTCCCGTGTTA 59.071 41.667 3.32 0.00 36.75 2.41
129 130 3.747529 CGTATACAGGTTTTTCCCGTGTT 59.252 43.478 3.32 0.00 36.75 3.32
130 131 3.006752 TCGTATACAGGTTTTTCCCGTGT 59.993 43.478 3.32 0.00 36.75 4.49
131 132 3.368843 GTCGTATACAGGTTTTTCCCGTG 59.631 47.826 3.32 0.00 36.75 4.94
132 133 3.588955 GTCGTATACAGGTTTTTCCCGT 58.411 45.455 3.32 0.00 36.75 5.28
133 134 2.931969 GGTCGTATACAGGTTTTTCCCG 59.068 50.000 3.32 0.00 36.75 5.14
134 135 3.273434 GGGTCGTATACAGGTTTTTCCC 58.727 50.000 3.32 0.00 36.75 3.97
135 136 2.931969 CGGGTCGTATACAGGTTTTTCC 59.068 50.000 3.32 0.00 0.00 3.13
136 137 2.931969 CCGGGTCGTATACAGGTTTTTC 59.068 50.000 3.32 0.00 0.00 2.29
137 138 2.355007 CCCGGGTCGTATACAGGTTTTT 60.355 50.000 14.18 0.00 0.00 1.94
138 139 1.207811 CCCGGGTCGTATACAGGTTTT 59.792 52.381 14.18 0.00 0.00 2.43
139 140 0.826062 CCCGGGTCGTATACAGGTTT 59.174 55.000 14.18 0.00 0.00 3.27
140 141 0.324645 ACCCGGGTCGTATACAGGTT 60.325 55.000 24.16 0.00 0.00 3.50
141 142 0.753111 GACCCGGGTCGTATACAGGT 60.753 60.000 36.87 4.37 35.30 4.00
142 143 2.036236 GACCCGGGTCGTATACAGG 58.964 63.158 36.87 0.43 35.30 4.00
151 152 4.185059 GCTCGTACGACCCGGGTC 62.185 72.222 39.19 39.19 41.40 4.46
155 156 4.764336 TTGCGCTCGTACGACCCG 62.764 66.667 22.24 22.24 34.06 5.28
156 157 2.431260 TTTGCGCTCGTACGACCC 60.431 61.111 15.28 7.48 34.06 4.46
157 158 1.731969 AGTTTGCGCTCGTACGACC 60.732 57.895 15.28 7.25 34.06 4.79
158 159 1.411089 CAGTTTGCGCTCGTACGAC 59.589 57.895 15.28 10.55 34.06 4.34
159 160 1.731613 CCAGTTTGCGCTCGTACGA 60.732 57.895 18.41 18.41 34.06 3.43
160 161 1.674611 CTCCAGTTTGCGCTCGTACG 61.675 60.000 9.53 9.53 0.00 3.67
161 162 0.388134 TCTCCAGTTTGCGCTCGTAC 60.388 55.000 9.73 1.03 0.00 3.67
162 163 0.388134 GTCTCCAGTTTGCGCTCGTA 60.388 55.000 9.73 0.00 0.00 3.43
163 164 1.664965 GTCTCCAGTTTGCGCTCGT 60.665 57.895 9.73 0.00 0.00 4.18
164 165 2.383527 GGTCTCCAGTTTGCGCTCG 61.384 63.158 9.73 0.00 0.00 5.03
165 166 2.035442 GGGTCTCCAGTTTGCGCTC 61.035 63.158 9.73 0.00 0.00 5.03
166 167 2.032681 GGGTCTCCAGTTTGCGCT 59.967 61.111 9.73 0.00 0.00 5.92
167 168 2.032681 AGGGTCTCCAGTTTGCGC 59.967 61.111 0.00 0.00 34.83 6.09
168 169 4.285851 GAGGGTCTCCAGTTTGCG 57.714 61.111 0.00 0.00 34.83 4.85
177 178 0.108207 CATGCATGGAGGAGGGTCTC 59.892 60.000 19.40 0.00 0.00 3.36
178 179 0.326904 TCATGCATGGAGGAGGGTCT 60.327 55.000 25.97 0.00 0.00 3.85
179 180 0.179034 GTCATGCATGGAGGAGGGTC 60.179 60.000 25.97 3.16 0.00 4.46
180 181 0.915872 TGTCATGCATGGAGGAGGGT 60.916 55.000 25.97 0.00 0.00 4.34
181 182 0.465097 GTGTCATGCATGGAGGAGGG 60.465 60.000 25.97 0.00 0.00 4.30
182 183 0.812811 CGTGTCATGCATGGAGGAGG 60.813 60.000 25.97 9.54 0.00 4.30
183 184 0.107993 ACGTGTCATGCATGGAGGAG 60.108 55.000 25.97 15.62 38.39 3.69
184 185 1.136891 CTACGTGTCATGCATGGAGGA 59.863 52.381 25.97 10.89 40.59 3.71
185 186 1.575244 CTACGTGTCATGCATGGAGG 58.425 55.000 25.97 19.06 40.59 4.30
186 187 0.933097 GCTACGTGTCATGCATGGAG 59.067 55.000 25.97 16.26 45.76 3.86
187 188 0.248843 TGCTACGTGTCATGCATGGA 59.751 50.000 25.97 10.82 38.39 3.41
188 189 1.085893 TTGCTACGTGTCATGCATGG 58.914 50.000 25.97 12.57 38.39 3.66
189 190 2.160219 AGTTTGCTACGTGTCATGCATG 59.840 45.455 21.07 21.07 39.90 4.06
190 191 2.160219 CAGTTTGCTACGTGTCATGCAT 59.840 45.455 0.00 0.00 35.27 3.96
191 192 1.530720 CAGTTTGCTACGTGTCATGCA 59.469 47.619 0.00 0.00 0.00 3.96
192 193 1.798223 TCAGTTTGCTACGTGTCATGC 59.202 47.619 0.00 0.00 0.00 4.06
193 194 4.389992 AGATTCAGTTTGCTACGTGTCATG 59.610 41.667 0.00 0.00 0.00 3.07
194 195 4.569943 AGATTCAGTTTGCTACGTGTCAT 58.430 39.130 0.00 0.00 0.00 3.06
195 196 3.987868 GAGATTCAGTTTGCTACGTGTCA 59.012 43.478 0.00 0.00 0.00 3.58
196 197 3.987868 TGAGATTCAGTTTGCTACGTGTC 59.012 43.478 0.00 0.00 0.00 3.67
197 198 3.990092 TGAGATTCAGTTTGCTACGTGT 58.010 40.909 0.00 0.00 0.00 4.49
198 199 4.990543 TTGAGATTCAGTTTGCTACGTG 57.009 40.909 0.00 0.00 0.00 4.49
199 200 4.083802 GCTTTGAGATTCAGTTTGCTACGT 60.084 41.667 0.00 0.00 0.00 3.57
200 201 4.083855 TGCTTTGAGATTCAGTTTGCTACG 60.084 41.667 0.00 0.00 0.00 3.51
201 202 5.362556 TGCTTTGAGATTCAGTTTGCTAC 57.637 39.130 0.00 0.00 0.00 3.58
202 203 4.083110 GCTGCTTTGAGATTCAGTTTGCTA 60.083 41.667 0.00 0.00 0.00 3.49
203 204 3.305199 GCTGCTTTGAGATTCAGTTTGCT 60.305 43.478 0.00 0.00 0.00 3.91
204 205 2.985139 GCTGCTTTGAGATTCAGTTTGC 59.015 45.455 0.00 0.00 0.00 3.68
205 206 4.233123 TGCTGCTTTGAGATTCAGTTTG 57.767 40.909 0.00 0.00 0.00 2.93
206 207 4.098349 TGTTGCTGCTTTGAGATTCAGTTT 59.902 37.500 0.00 0.00 0.00 2.66
207 208 3.633525 TGTTGCTGCTTTGAGATTCAGTT 59.366 39.130 0.00 0.00 0.00 3.16
208 209 3.004106 GTGTTGCTGCTTTGAGATTCAGT 59.996 43.478 0.00 0.00 0.00 3.41
209 210 3.004002 TGTGTTGCTGCTTTGAGATTCAG 59.996 43.478 0.00 0.00 0.00 3.02
210 211 2.950975 TGTGTTGCTGCTTTGAGATTCA 59.049 40.909 0.00 0.00 0.00 2.57
211 212 3.004106 ACTGTGTTGCTGCTTTGAGATTC 59.996 43.478 0.00 0.00 0.00 2.52
212 213 2.954318 ACTGTGTTGCTGCTTTGAGATT 59.046 40.909 0.00 0.00 0.00 2.40
213 214 2.579873 ACTGTGTTGCTGCTTTGAGAT 58.420 42.857 0.00 0.00 0.00 2.75
214 215 2.042686 ACTGTGTTGCTGCTTTGAGA 57.957 45.000 0.00 0.00 0.00 3.27
215 216 2.350197 GCTACTGTGTTGCTGCTTTGAG 60.350 50.000 0.00 0.00 32.12 3.02
216 217 1.603802 GCTACTGTGTTGCTGCTTTGA 59.396 47.619 0.00 0.00 32.12 2.69
217 218 1.335324 GGCTACTGTGTTGCTGCTTTG 60.335 52.381 0.00 0.00 34.94 2.77
218 219 0.954452 GGCTACTGTGTTGCTGCTTT 59.046 50.000 0.00 0.00 34.94 3.51
219 220 0.179020 TGGCTACTGTGTTGCTGCTT 60.179 50.000 0.00 0.00 34.94 3.91
220 221 0.037303 ATGGCTACTGTGTTGCTGCT 59.963 50.000 0.00 0.00 34.94 4.24
221 222 1.737838 TATGGCTACTGTGTTGCTGC 58.262 50.000 0.00 0.00 34.94 5.25
222 223 4.201950 GGAATTATGGCTACTGTGTTGCTG 60.202 45.833 4.44 0.00 34.94 4.41
223 224 3.947834 GGAATTATGGCTACTGTGTTGCT 59.052 43.478 4.44 0.00 34.94 3.91
224 225 3.066760 GGGAATTATGGCTACTGTGTTGC 59.933 47.826 0.00 0.00 33.89 4.17
225 226 3.632145 GGGGAATTATGGCTACTGTGTTG 59.368 47.826 0.00 0.00 0.00 3.33
226 227 3.527665 AGGGGAATTATGGCTACTGTGTT 59.472 43.478 0.00 0.00 0.00 3.32
227 228 3.123273 AGGGGAATTATGGCTACTGTGT 58.877 45.455 0.00 0.00 0.00 3.72
228 229 3.864789 AGGGGAATTATGGCTACTGTG 57.135 47.619 0.00 0.00 0.00 3.66
229 230 4.536765 CAAAGGGGAATTATGGCTACTGT 58.463 43.478 0.00 0.00 0.00 3.55
230 231 3.319122 GCAAAGGGGAATTATGGCTACTG 59.681 47.826 0.00 0.00 0.00 2.74
231 232 3.052944 TGCAAAGGGGAATTATGGCTACT 60.053 43.478 0.00 0.00 0.00 2.57
232 233 3.295973 TGCAAAGGGGAATTATGGCTAC 58.704 45.455 0.00 0.00 0.00 3.58
233 234 3.678965 TGCAAAGGGGAATTATGGCTA 57.321 42.857 0.00 0.00 0.00 3.93
234 235 2.548464 TGCAAAGGGGAATTATGGCT 57.452 45.000 0.00 0.00 0.00 4.75
235 236 3.625649 TTTGCAAAGGGGAATTATGGC 57.374 42.857 8.05 0.00 0.00 4.40
236 237 4.163839 TGGATTTGCAAAGGGGAATTATGG 59.836 41.667 18.19 0.00 0.00 2.74
237 238 5.356291 TGGATTTGCAAAGGGGAATTATG 57.644 39.130 18.19 0.00 0.00 1.90
238 239 5.626578 CGTTGGATTTGCAAAGGGGAATTAT 60.627 40.000 18.19 0.00 0.00 1.28
239 240 4.322349 CGTTGGATTTGCAAAGGGGAATTA 60.322 41.667 18.19 0.00 0.00 1.40
240 241 3.556843 CGTTGGATTTGCAAAGGGGAATT 60.557 43.478 18.19 0.00 0.00 2.17
241 242 2.028203 CGTTGGATTTGCAAAGGGGAAT 60.028 45.455 18.19 0.00 0.00 3.01
242 243 1.342819 CGTTGGATTTGCAAAGGGGAA 59.657 47.619 18.19 4.98 0.00 3.97
243 244 0.965439 CGTTGGATTTGCAAAGGGGA 59.035 50.000 18.19 1.19 0.00 4.81
244 245 0.678950 ACGTTGGATTTGCAAAGGGG 59.321 50.000 18.19 6.04 0.00 4.79
245 246 1.336795 GGACGTTGGATTTGCAAAGGG 60.337 52.381 18.19 5.38 0.00 3.95
246 247 1.336795 GGGACGTTGGATTTGCAAAGG 60.337 52.381 18.19 2.13 0.00 3.11
247 248 1.336795 GGGGACGTTGGATTTGCAAAG 60.337 52.381 18.19 5.20 0.00 2.77
248 249 0.676736 GGGGACGTTGGATTTGCAAA 59.323 50.000 15.44 15.44 0.00 3.68
249 250 0.468214 TGGGGACGTTGGATTTGCAA 60.468 50.000 0.00 0.00 0.00 4.08
250 251 0.251564 ATGGGGACGTTGGATTTGCA 60.252 50.000 0.00 0.00 0.00 4.08
251 252 1.757682 TATGGGGACGTTGGATTTGC 58.242 50.000 0.00 0.00 0.00 3.68
252 253 3.317993 GGAATATGGGGACGTTGGATTTG 59.682 47.826 0.00 0.00 0.00 2.32
253 254 3.053245 TGGAATATGGGGACGTTGGATTT 60.053 43.478 0.00 0.00 0.00 2.17
254 255 2.512056 TGGAATATGGGGACGTTGGATT 59.488 45.455 0.00 0.00 0.00 3.01
255 256 2.106511 CTGGAATATGGGGACGTTGGAT 59.893 50.000 0.00 0.00 0.00 3.41
256 257 1.488812 CTGGAATATGGGGACGTTGGA 59.511 52.381 0.00 0.00 0.00 3.53
257 258 1.967319 CTGGAATATGGGGACGTTGG 58.033 55.000 0.00 0.00 0.00 3.77
258 259 1.308998 GCTGGAATATGGGGACGTTG 58.691 55.000 0.00 0.00 0.00 4.10
259 260 0.182775 GGCTGGAATATGGGGACGTT 59.817 55.000 0.00 0.00 0.00 3.99
260 261 1.837090 GGCTGGAATATGGGGACGT 59.163 57.895 0.00 0.00 0.00 4.34
261 262 1.301716 CGGCTGGAATATGGGGACG 60.302 63.158 0.00 0.00 0.00 4.79
262 263 1.600916 GCGGCTGGAATATGGGGAC 60.601 63.158 0.00 0.00 0.00 4.46
263 264 2.829384 GGCGGCTGGAATATGGGGA 61.829 63.158 0.00 0.00 0.00 4.81
264 265 2.282462 GGCGGCTGGAATATGGGG 60.282 66.667 0.00 0.00 0.00 4.96
265 266 2.669569 CGGCGGCTGGAATATGGG 60.670 66.667 7.61 0.00 0.00 4.00
266 267 2.669569 CCGGCGGCTGGAATATGG 60.670 66.667 23.67 0.00 29.82 2.74
267 268 2.111043 ACCGGCGGCTGGAATATG 59.889 61.111 33.58 6.90 33.36 1.78
268 269 2.111043 CACCGGCGGCTGGAATAT 59.889 61.111 33.58 8.98 33.36 1.28
269 270 3.078196 TCACCGGCGGCTGGAATA 61.078 61.111 33.58 15.18 33.36 1.75
270 271 4.473520 CTCACCGGCGGCTGGAAT 62.474 66.667 33.58 10.20 33.36 3.01
273 274 4.899239 GATCTCACCGGCGGCTGG 62.899 72.222 28.71 26.03 35.68 4.85
274 275 4.899239 GGATCTCACCGGCGGCTG 62.899 72.222 28.71 22.50 0.00 4.85
282 283 4.554036 GCTGGGGCGGATCTCACC 62.554 72.222 0.00 0.00 0.00 4.02
283 284 3.474570 AGCTGGGGCGGATCTCAC 61.475 66.667 0.00 0.00 44.37 3.51
284 285 3.473647 CAGCTGGGGCGGATCTCA 61.474 66.667 5.57 0.00 44.37 3.27
285 286 4.925861 GCAGCTGGGGCGGATCTC 62.926 72.222 17.12 0.00 44.37 2.75
287 288 4.925861 GAGCAGCTGGGGCGGATC 62.926 72.222 17.12 0.00 41.09 3.36
315 316 3.456431 CTAGCGTCGAGGAGCACGG 62.456 68.421 9.75 0.00 36.50 4.94
316 317 2.023461 CTAGCGTCGAGGAGCACG 59.977 66.667 9.75 0.00 39.09 5.34
317 318 2.409651 CCTAGCGTCGAGGAGCAC 59.590 66.667 9.75 0.00 35.99 4.40
318 319 3.518998 GCCTAGCGTCGAGGAGCA 61.519 66.667 9.75 0.00 35.99 4.26
335 336 3.095347 GCCTAGCTGGGGAGTTCCG 62.095 68.421 18.96 0.00 36.71 4.30
336 337 2.911928 GCCTAGCTGGGGAGTTCC 59.088 66.667 18.96 0.00 36.00 3.62
348 349 1.369321 GGGGATGAAGCTCGCCTAG 59.631 63.158 0.00 0.00 43.16 3.02
349 350 2.498941 CGGGGATGAAGCTCGCCTA 61.499 63.158 5.43 0.00 44.03 3.93
350 351 3.854669 CGGGGATGAAGCTCGCCT 61.855 66.667 5.43 0.00 44.03 5.52
354 355 4.918201 CCGGCGGGGATGAAGCTC 62.918 72.222 20.56 0.00 38.47 4.09
357 358 4.794648 TTGCCGGCGGGGATGAAG 62.795 66.667 29.48 0.00 38.47 3.02
358 359 4.794648 CTTGCCGGCGGGGATGAA 62.795 66.667 29.48 7.51 38.47 2.57
367 368 4.699522 AACGAGGTCCTTGCCGGC 62.700 66.667 22.73 22.73 0.00 6.13
368 369 2.032071 AAACGAGGTCCTTGCCGG 59.968 61.111 5.98 0.00 0.00 6.13
369 370 1.164041 AACAAACGAGGTCCTTGCCG 61.164 55.000 5.98 1.28 0.00 5.69
370 371 0.310854 CAACAAACGAGGTCCTTGCC 59.689 55.000 5.98 0.00 0.00 4.52
371 372 0.310854 CCAACAAACGAGGTCCTTGC 59.689 55.000 5.98 0.00 0.00 4.01
372 373 0.310854 GCCAACAAACGAGGTCCTTG 59.689 55.000 4.37 4.37 0.00 3.61
373 374 1.164041 CGCCAACAAACGAGGTCCTT 61.164 55.000 0.00 0.00 0.00 3.36
374 375 1.597027 CGCCAACAAACGAGGTCCT 60.597 57.895 0.00 0.00 0.00 3.85
375 376 2.613506 CCGCCAACAAACGAGGTCC 61.614 63.158 0.00 0.00 0.00 4.46
376 377 2.943653 CCGCCAACAAACGAGGTC 59.056 61.111 0.00 0.00 0.00 3.85
377 378 3.284449 GCCGCCAACAAACGAGGT 61.284 61.111 0.00 0.00 0.00 3.85
378 379 4.038080 GGCCGCCAACAAACGAGG 62.038 66.667 3.91 0.00 0.00 4.63
379 380 4.038080 GGGCCGCCAACAAACGAG 62.038 66.667 12.58 0.00 0.00 4.18
407 408 4.832608 GTGGCGACTAAGGGCGGG 62.833 72.222 0.00 0.00 0.00 6.13
408 409 3.385749 ATGTGGCGACTAAGGGCGG 62.386 63.158 0.00 0.00 0.00 6.13
409 410 1.883084 GATGTGGCGACTAAGGGCG 60.883 63.158 0.00 0.00 0.00 6.13
410 411 1.523938 GGATGTGGCGACTAAGGGC 60.524 63.158 0.00 0.00 0.00 5.19
411 412 1.227263 CGGATGTGGCGACTAAGGG 60.227 63.158 0.00 0.00 0.00 3.95
412 413 1.883084 GCGGATGTGGCGACTAAGG 60.883 63.158 0.00 0.00 0.00 2.69
413 414 1.883084 GGCGGATGTGGCGACTAAG 60.883 63.158 0.00 0.00 0.00 2.18
414 415 2.185867 GGCGGATGTGGCGACTAA 59.814 61.111 0.00 0.00 0.00 2.24
415 416 3.845259 GGGCGGATGTGGCGACTA 61.845 66.667 0.00 0.00 34.76 2.59
430 431 4.785453 GAGGAGCAAGCCCGTGGG 62.785 72.222 0.00 0.00 38.57 4.61
431 432 3.551496 TTGAGGAGCAAGCCCGTGG 62.551 63.158 0.00 0.00 31.55 4.94
432 433 2.032528 TTGAGGAGCAAGCCCGTG 59.967 61.111 0.00 0.00 31.55 4.94
433 434 2.032681 GTTGAGGAGCAAGCCCGT 59.967 61.111 0.00 0.00 37.12 5.28
434 435 3.121030 CGTTGAGGAGCAAGCCCG 61.121 66.667 0.00 0.00 37.12 6.13
435 436 3.435186 GCGTTGAGGAGCAAGCCC 61.435 66.667 0.00 0.00 37.12 5.19
436 437 3.435186 GGCGTTGAGGAGCAAGCC 61.435 66.667 0.00 0.00 40.76 4.35
437 438 3.793144 CGGCGTTGAGGAGCAAGC 61.793 66.667 0.00 0.00 37.12 4.01
438 439 3.121030 CCGGCGTTGAGGAGCAAG 61.121 66.667 6.01 0.00 37.12 4.01
439 440 4.697756 CCCGGCGTTGAGGAGCAA 62.698 66.667 6.01 0.00 34.54 3.91
445 446 4.323477 TTGTCCCCCGGCGTTGAG 62.323 66.667 6.01 0.00 0.00 3.02
446 447 4.629523 GTTGTCCCCCGGCGTTGA 62.630 66.667 6.01 0.00 0.00 3.18
447 448 4.636435 AGTTGTCCCCCGGCGTTG 62.636 66.667 6.01 0.00 0.00 4.10
448 449 4.324991 GAGTTGTCCCCCGGCGTT 62.325 66.667 6.01 0.00 0.00 4.84
460 461 0.588252 CAGCACGAACAAGGGAGTTG 59.412 55.000 0.00 0.00 42.48 3.16
461 462 1.166531 GCAGCACGAACAAGGGAGTT 61.167 55.000 0.00 0.00 0.00 3.01
462 463 1.598130 GCAGCACGAACAAGGGAGT 60.598 57.895 0.00 0.00 0.00 3.85
463 464 1.294659 GAGCAGCACGAACAAGGGAG 61.295 60.000 0.00 0.00 0.00 4.30
464 465 1.301716 GAGCAGCACGAACAAGGGA 60.302 57.895 0.00 0.00 0.00 4.20
465 466 2.328099 GGAGCAGCACGAACAAGGG 61.328 63.158 0.00 0.00 0.00 3.95
466 467 0.957395 ATGGAGCAGCACGAACAAGG 60.957 55.000 0.00 0.00 0.00 3.61
467 468 0.445436 GATGGAGCAGCACGAACAAG 59.555 55.000 0.00 0.00 0.00 3.16
468 469 0.955428 GGATGGAGCAGCACGAACAA 60.955 55.000 0.00 0.00 0.00 2.83
469 470 1.375908 GGATGGAGCAGCACGAACA 60.376 57.895 0.00 0.00 0.00 3.18
470 471 2.109126 GGGATGGAGCAGCACGAAC 61.109 63.158 0.00 0.00 0.00 3.95
471 472 2.268920 GGGATGGAGCAGCACGAA 59.731 61.111 0.00 0.00 0.00 3.85
472 473 3.785859 GGGGATGGAGCAGCACGA 61.786 66.667 0.00 0.00 0.00 4.35
473 474 4.100084 TGGGGATGGAGCAGCACG 62.100 66.667 0.00 0.00 0.00 5.34
474 475 2.439156 GTGGGGATGGAGCAGCAC 60.439 66.667 0.00 0.00 0.00 4.40
475 476 3.731728 GGTGGGGATGGAGCAGCA 61.732 66.667 0.00 0.00 0.00 4.41
476 477 4.864334 CGGTGGGGATGGAGCAGC 62.864 72.222 0.00 0.00 0.00 5.25
477 478 4.181010 CCGGTGGGGATGGAGCAG 62.181 72.222 0.00 0.00 38.47 4.24
478 479 4.731853 TCCGGTGGGGATGGAGCA 62.732 66.667 0.00 0.00 40.94 4.26
479 480 3.406595 CTTCCGGTGGGGATGGAGC 62.407 68.421 0.00 0.00 46.62 4.70
480 481 1.689233 TCTTCCGGTGGGGATGGAG 60.689 63.158 0.00 0.00 46.62 3.86
481 482 1.689233 CTCTTCCGGTGGGGATGGA 60.689 63.158 0.00 0.00 46.62 3.41
482 483 2.746375 CCTCTTCCGGTGGGGATGG 61.746 68.421 9.99 0.00 46.62 3.51
483 484 2.911143 CCTCTTCCGGTGGGGATG 59.089 66.667 9.99 0.00 46.62 3.51
484 485 3.090532 GCCTCTTCCGGTGGGGAT 61.091 66.667 17.98 0.00 46.62 3.85
487 488 4.410400 GTGGCCTCTTCCGGTGGG 62.410 72.222 3.32 0.62 0.00 4.61
488 489 2.484287 AATGTGGCCTCTTCCGGTGG 62.484 60.000 3.32 0.98 0.00 4.61
489 490 1.002134 AATGTGGCCTCTTCCGGTG 60.002 57.895 3.32 0.00 0.00 4.94
490 491 1.299976 GAATGTGGCCTCTTCCGGT 59.700 57.895 3.32 0.00 0.00 5.28
491 492 1.815421 CGAATGTGGCCTCTTCCGG 60.815 63.158 3.32 0.00 0.00 5.14
492 493 1.079127 ACGAATGTGGCCTCTTCCG 60.079 57.895 3.32 0.05 0.00 4.30
493 494 1.084370 CGACGAATGTGGCCTCTTCC 61.084 60.000 3.32 0.00 0.00 3.46
494 495 0.108804 TCGACGAATGTGGCCTCTTC 60.109 55.000 3.32 5.69 0.00 2.87
495 496 0.537188 ATCGACGAATGTGGCCTCTT 59.463 50.000 3.32 0.00 0.00 2.85
496 497 0.179100 CATCGACGAATGTGGCCTCT 60.179 55.000 3.32 0.00 0.00 3.69
497 498 1.154205 CCATCGACGAATGTGGCCTC 61.154 60.000 3.32 0.00 0.00 4.70
498 499 1.153369 CCATCGACGAATGTGGCCT 60.153 57.895 3.32 0.00 0.00 5.19
499 500 1.429148 GACCATCGACGAATGTGGCC 61.429 60.000 14.44 0.00 35.11 5.36
500 501 1.429148 GGACCATCGACGAATGTGGC 61.429 60.000 14.44 8.32 35.11 5.01
501 502 0.108377 TGGACCATCGACGAATGTGG 60.108 55.000 13.21 13.21 37.74 4.17
502 503 1.280982 CTGGACCATCGACGAATGTG 58.719 55.000 0.00 0.00 0.00 3.21
503 504 0.460284 GCTGGACCATCGACGAATGT 60.460 55.000 0.00 1.44 0.00 2.71
504 505 0.179100 AGCTGGACCATCGACGAATG 60.179 55.000 0.00 0.95 0.00 2.67
505 506 0.103208 GAGCTGGACCATCGACGAAT 59.897 55.000 0.00 0.00 0.00 3.34
506 507 1.511305 GAGCTGGACCATCGACGAA 59.489 57.895 0.00 0.00 0.00 3.85
507 508 2.761195 CGAGCTGGACCATCGACGA 61.761 63.158 11.33 0.00 38.72 4.20
508 509 2.278206 CGAGCTGGACCATCGACG 60.278 66.667 11.33 7.45 38.72 5.12
509 510 2.583593 GCGAGCTGGACCATCGAC 60.584 66.667 19.32 8.43 38.72 4.20
510 511 4.193334 CGCGAGCTGGACCATCGA 62.193 66.667 19.32 0.00 38.72 3.59
522 523 4.680237 TTGGGACAGTGCCGCGAG 62.680 66.667 8.23 0.00 42.39 5.03
523 524 4.980805 GTTGGGACAGTGCCGCGA 62.981 66.667 8.23 0.00 42.39 5.87
524 525 4.988598 AGTTGGGACAGTGCCGCG 62.989 66.667 6.61 0.00 42.39 6.46
525 526 3.357079 CAGTTGGGACAGTGCCGC 61.357 66.667 6.61 1.98 42.39 6.53
526 527 3.357079 GCAGTTGGGACAGTGCCG 61.357 66.667 6.61 0.00 42.17 5.69
528 529 2.263741 CCAGCAGTTGGGACAGTGC 61.264 63.158 0.00 0.00 46.42 4.40
529 530 4.069869 CCAGCAGTTGGGACAGTG 57.930 61.111 0.00 0.00 43.75 3.66
546 547 0.595095 CAAAGCAGCACAAGGGAGAC 59.405 55.000 0.00 0.00 0.00 3.36
547 548 0.473755 TCAAAGCAGCACAAGGGAGA 59.526 50.000 0.00 0.00 0.00 3.71
548 549 0.879765 CTCAAAGCAGCACAAGGGAG 59.120 55.000 0.00 0.00 0.00 4.30
549 550 0.473755 TCTCAAAGCAGCACAAGGGA 59.526 50.000 0.00 0.00 0.00 4.20
550 551 1.542492 ATCTCAAAGCAGCACAAGGG 58.458 50.000 0.00 0.00 0.00 3.95
551 552 2.413765 CGAATCTCAAAGCAGCACAAGG 60.414 50.000 0.00 0.00 0.00 3.61
552 553 2.413765 CCGAATCTCAAAGCAGCACAAG 60.414 50.000 0.00 0.00 0.00 3.16
553 554 1.536766 CCGAATCTCAAAGCAGCACAA 59.463 47.619 0.00 0.00 0.00 3.33
554 555 1.159285 CCGAATCTCAAAGCAGCACA 58.841 50.000 0.00 0.00 0.00 4.57
555 556 1.160137 ACCGAATCTCAAAGCAGCAC 58.840 50.000 0.00 0.00 0.00 4.40
556 557 1.896220 AACCGAATCTCAAAGCAGCA 58.104 45.000 0.00 0.00 0.00 4.41
557 558 2.030805 ACAAACCGAATCTCAAAGCAGC 60.031 45.455 0.00 0.00 0.00 5.25
558 559 3.250762 TGACAAACCGAATCTCAAAGCAG 59.749 43.478 0.00 0.00 0.00 4.24
559 560 3.210227 TGACAAACCGAATCTCAAAGCA 58.790 40.909 0.00 0.00 0.00 3.91
560 561 3.498397 TCTGACAAACCGAATCTCAAAGC 59.502 43.478 0.00 0.00 0.00 3.51
561 562 5.180117 ACATCTGACAAACCGAATCTCAAAG 59.820 40.000 0.00 0.00 0.00 2.77
562 563 5.063204 ACATCTGACAAACCGAATCTCAAA 58.937 37.500 0.00 0.00 0.00 2.69
563 564 4.641396 ACATCTGACAAACCGAATCTCAA 58.359 39.130 0.00 0.00 0.00 3.02
564 565 4.245660 GACATCTGACAAACCGAATCTCA 58.754 43.478 0.00 0.00 0.00 3.27
565 566 4.245660 TGACATCTGACAAACCGAATCTC 58.754 43.478 0.00 0.00 0.00 2.75
566 567 4.271696 TGACATCTGACAAACCGAATCT 57.728 40.909 0.00 0.00 0.00 2.40
567 568 4.728882 GCATGACATCTGACAAACCGAATC 60.729 45.833 0.00 0.00 0.00 2.52
568 569 3.127548 GCATGACATCTGACAAACCGAAT 59.872 43.478 0.00 0.00 0.00 3.34
569 570 2.483877 GCATGACATCTGACAAACCGAA 59.516 45.455 0.00 0.00 0.00 4.30
570 571 2.076100 GCATGACATCTGACAAACCGA 58.924 47.619 0.00 0.00 0.00 4.69
571 572 1.201954 CGCATGACATCTGACAAACCG 60.202 52.381 0.00 0.00 0.00 4.44
572 573 1.806542 ACGCATGACATCTGACAAACC 59.193 47.619 0.00 0.00 0.00 3.27
573 574 2.413239 CCACGCATGACATCTGACAAAC 60.413 50.000 0.00 0.00 0.00 2.93
574 575 1.805943 CCACGCATGACATCTGACAAA 59.194 47.619 0.00 0.00 0.00 2.83
575 576 1.001860 TCCACGCATGACATCTGACAA 59.998 47.619 0.00 0.00 0.00 3.18
576 577 0.607620 TCCACGCATGACATCTGACA 59.392 50.000 0.00 0.00 0.00 3.58
577 578 1.945387 ATCCACGCATGACATCTGAC 58.055 50.000 0.00 0.00 0.00 3.51
578 579 3.493176 CCTTATCCACGCATGACATCTGA 60.493 47.826 0.00 0.00 0.00 3.27
579 580 2.804527 CCTTATCCACGCATGACATCTG 59.195 50.000 0.00 0.00 0.00 2.90
580 581 2.224378 CCCTTATCCACGCATGACATCT 60.224 50.000 0.00 0.00 0.00 2.90
581 582 2.146342 CCCTTATCCACGCATGACATC 58.854 52.381 0.00 0.00 0.00 3.06
582 583 1.490490 ACCCTTATCCACGCATGACAT 59.510 47.619 0.00 0.00 0.00 3.06
583 584 0.908910 ACCCTTATCCACGCATGACA 59.091 50.000 0.00 0.00 0.00 3.58
584 585 1.139058 AGACCCTTATCCACGCATGAC 59.861 52.381 0.00 0.00 0.00 3.06
585 586 1.412710 GAGACCCTTATCCACGCATGA 59.587 52.381 0.00 0.00 0.00 3.07
586 587 1.541233 GGAGACCCTTATCCACGCATG 60.541 57.143 0.00 0.00 35.54 4.06
587 588 0.759346 GGAGACCCTTATCCACGCAT 59.241 55.000 0.00 0.00 35.54 4.73
588 589 0.616395 TGGAGACCCTTATCCACGCA 60.616 55.000 0.00 0.00 40.70 5.24
589 590 0.105039 CTGGAGACCCTTATCCACGC 59.895 60.000 0.00 0.00 40.70 5.34
590 591 1.486211 ACTGGAGACCCTTATCCACG 58.514 55.000 0.00 0.00 40.70 4.94
591 592 3.610911 CAAACTGGAGACCCTTATCCAC 58.389 50.000 0.00 0.00 40.70 4.02
592 593 2.026262 GCAAACTGGAGACCCTTATCCA 60.026 50.000 0.00 0.00 43.34 3.41
593 594 2.644676 GCAAACTGGAGACCCTTATCC 58.355 52.381 0.00 0.00 36.05 2.59
594 595 2.280628 CGCAAACTGGAGACCCTTATC 58.719 52.381 0.00 0.00 0.00 1.75
595 596 1.628846 ACGCAAACTGGAGACCCTTAT 59.371 47.619 0.00 0.00 0.00 1.73
596 597 1.053424 ACGCAAACTGGAGACCCTTA 58.947 50.000 0.00 0.00 0.00 2.69
597 598 0.182775 AACGCAAACTGGAGACCCTT 59.817 50.000 0.00 0.00 0.00 3.95
598 599 0.250338 GAACGCAAACTGGAGACCCT 60.250 55.000 0.00 0.00 0.00 4.34
599 600 1.566018 CGAACGCAAACTGGAGACCC 61.566 60.000 0.00 0.00 0.00 4.46
600 601 0.878961 ACGAACGCAAACTGGAGACC 60.879 55.000 0.00 0.00 0.00 3.85
601 602 1.454653 GTACGAACGCAAACTGGAGAC 59.545 52.381 0.00 0.00 0.00 3.36
602 603 1.774639 GTACGAACGCAAACTGGAGA 58.225 50.000 0.00 0.00 0.00 3.71
603 604 0.433492 CGTACGAACGCAAACTGGAG 59.567 55.000 10.44 0.00 43.12 3.86
604 605 2.508743 CGTACGAACGCAAACTGGA 58.491 52.632 10.44 0.00 43.12 3.86
643 644 8.397148 ACTTCGTGTTCGTTTTATTAGGAAAAA 58.603 29.630 0.00 0.00 38.33 1.94
644 645 7.851963 CACTTCGTGTTCGTTTTATTAGGAAAA 59.148 33.333 0.00 0.00 38.33 2.29
645 646 7.224362 TCACTTCGTGTTCGTTTTATTAGGAAA 59.776 33.333 0.00 0.00 38.33 3.13
646 647 6.700960 TCACTTCGTGTTCGTTTTATTAGGAA 59.299 34.615 0.00 0.00 38.33 3.36
647 648 6.144402 GTCACTTCGTGTTCGTTTTATTAGGA 59.856 38.462 0.00 0.00 38.33 2.94
648 649 6.145048 AGTCACTTCGTGTTCGTTTTATTAGG 59.855 38.462 0.00 0.00 38.33 2.69
649 650 7.101993 AGTCACTTCGTGTTCGTTTTATTAG 57.898 36.000 0.00 0.00 38.33 1.73
650 651 6.129378 CGAGTCACTTCGTGTTCGTTTTATTA 60.129 38.462 12.10 0.00 37.16 0.98
651 652 5.332055 CGAGTCACTTCGTGTTCGTTTTATT 60.332 40.000 12.10 0.00 37.16 1.40
652 653 4.147653 CGAGTCACTTCGTGTTCGTTTTAT 59.852 41.667 12.10 0.00 37.16 1.40
653 654 3.483196 CGAGTCACTTCGTGTTCGTTTTA 59.517 43.478 12.10 0.00 37.16 1.52
654 655 2.280708 CGAGTCACTTCGTGTTCGTTTT 59.719 45.455 12.10 0.00 37.16 2.43
655 656 1.850441 CGAGTCACTTCGTGTTCGTTT 59.150 47.619 12.10 0.00 37.16 3.60
656 657 1.474017 CGAGTCACTTCGTGTTCGTT 58.526 50.000 12.10 0.00 37.16 3.85
657 658 3.159446 CGAGTCACTTCGTGTTCGT 57.841 52.632 12.10 0.00 37.16 3.85
664 665 8.004585 AGAAGTAAATTTTACGAGTCACTTCG 57.995 34.615 15.39 0.00 43.29 3.79
665 666 8.975439 TGAGAAGTAAATTTTACGAGTCACTTC 58.025 33.333 14.27 14.27 40.43 3.01
666 667 8.762426 GTGAGAAGTAAATTTTACGAGTCACTT 58.238 33.333 24.89 13.28 0.00 3.16
667 668 7.924412 TGTGAGAAGTAAATTTTACGAGTCACT 59.076 33.333 27.99 17.60 31.96 3.41
668 669 8.068893 TGTGAGAAGTAAATTTTACGAGTCAC 57.931 34.615 25.13 25.13 0.00 3.67
669 670 8.651391 TTGTGAGAAGTAAATTTTACGAGTCA 57.349 30.769 12.41 12.50 0.00 3.41
670 671 9.925268 TTTTGTGAGAAGTAAATTTTACGAGTC 57.075 29.630 12.41 11.22 0.00 3.36
691 692 7.222999 TGAACGTTTCACTTTTTCACTTTTTGT 59.777 29.630 0.46 0.00 34.08 2.83
692 693 7.559845 TGAACGTTTCACTTTTTCACTTTTTG 58.440 30.769 0.46 0.00 34.08 2.44
693 694 7.701809 TGAACGTTTCACTTTTTCACTTTTT 57.298 28.000 0.46 0.00 34.08 1.94
764 765 7.930217 TCACAGTCCTTTATTTTCTGTTTCTG 58.070 34.615 0.00 0.00 37.27 3.02
799 800 3.297620 CGTTTTGCTGGGCTGGCT 61.298 61.111 0.00 0.00 0.00 4.75
913 914 2.670939 GGAGGGGAGGAATTGGAATTG 58.329 52.381 0.00 0.00 0.00 2.32
1118 1120 3.754091 GCATCACGCGGAAAAAGC 58.246 55.556 12.47 2.58 0.00 3.51
1254 1257 1.847506 TTCTTCCCCAGGCAGAGCA 60.848 57.895 0.00 0.00 0.00 4.26
1255 1258 1.377856 GTTCTTCCCCAGGCAGAGC 60.378 63.158 0.00 0.00 0.00 4.09
1256 1259 1.078848 CGTTCTTCCCCAGGCAGAG 60.079 63.158 0.00 0.00 0.00 3.35
1271 1274 2.126580 GTACAGACGGCTCGCGTT 60.127 61.111 5.77 0.00 0.00 4.84
1400 1404 2.808933 CGTACAGGGGACACACAATTGT 60.809 50.000 4.92 4.92 35.84 2.71
1412 1416 2.167693 TGAGACATAAAGCGTACAGGGG 59.832 50.000 0.00 0.00 0.00 4.79
1418 1422 5.163550 ACTGCATAGTGAGACATAAAGCGTA 60.164 40.000 0.00 0.00 35.34 4.42
1446 1450 4.142513 GCACCTGAATCTGAATGAAGAACC 60.143 45.833 0.00 0.00 0.00 3.62
1478 1482 6.654582 AGCAATCACTAATCACATACACACAA 59.345 34.615 0.00 0.00 0.00 3.33
1510 1514 1.676006 CCGACCCACATATCAAAAGCC 59.324 52.381 0.00 0.00 0.00 4.35
1587 1591 7.935520 TGTTAAACAACAGAGCATGTAAATCA 58.064 30.769 0.00 0.00 43.00 2.57
1588 1592 8.970691 ATGTTAAACAACAGAGCATGTAAATC 57.029 30.769 0.00 0.00 43.00 2.17
1589 1593 9.762933 AAATGTTAAACAACAGAGCATGTAAAT 57.237 25.926 0.00 0.00 43.00 1.40
1590 1594 9.593134 AAAATGTTAAACAACAGAGCATGTAAA 57.407 25.926 0.00 0.00 43.00 2.01
1591 1595 9.029243 CAAAATGTTAAACAACAGAGCATGTAA 57.971 29.630 0.00 0.00 43.00 2.41
1592 1596 8.194104 ACAAAATGTTAAACAACAGAGCATGTA 58.806 29.630 0.00 0.00 43.00 2.29
1593 1597 7.041107 ACAAAATGTTAAACAACAGAGCATGT 58.959 30.769 0.00 0.00 46.97 3.21
1594 1598 7.467557 ACAAAATGTTAAACAACAGAGCATG 57.532 32.000 0.00 0.00 35.95 4.06
1595 1599 8.413229 ACTACAAAATGTTAAACAACAGAGCAT 58.587 29.630 0.00 0.00 35.95 3.79
1596 1600 7.767261 ACTACAAAATGTTAAACAACAGAGCA 58.233 30.769 0.00 0.00 35.95 4.26
1597 1601 8.531530 CAACTACAAAATGTTAAACAACAGAGC 58.468 33.333 0.00 0.00 35.95 4.09
1598 1602 9.781834 TCAACTACAAAATGTTAAACAACAGAG 57.218 29.630 0.00 0.00 35.95 3.35
1609 1613 9.410556 GAGCATGTAAATCAACTACAAAATGTT 57.589 29.630 0.00 0.00 33.17 2.71
1610 1614 8.796475 AGAGCATGTAAATCAACTACAAAATGT 58.204 29.630 0.00 0.00 33.17 2.71
1611 1615 9.069078 CAGAGCATGTAAATCAACTACAAAATG 57.931 33.333 0.00 0.00 33.17 2.32
1612 1616 8.796475 ACAGAGCATGTAAATCAACTACAAAAT 58.204 29.630 0.00 0.00 41.60 1.82
1613 1617 8.165239 ACAGAGCATGTAAATCAACTACAAAA 57.835 30.769 0.00 0.00 41.60 2.44
1614 1618 7.744087 ACAGAGCATGTAAATCAACTACAAA 57.256 32.000 0.00 0.00 41.60 2.83
1615 1619 7.228507 ACAACAGAGCATGTAAATCAACTACAA 59.771 33.333 0.00 0.00 43.00 2.41
1616 1620 6.710295 ACAACAGAGCATGTAAATCAACTACA 59.290 34.615 0.00 0.00 43.00 2.74
1617 1621 7.133891 ACAACAGAGCATGTAAATCAACTAC 57.866 36.000 0.00 0.00 43.00 2.73
1618 1622 7.443879 TCAACAACAGAGCATGTAAATCAACTA 59.556 33.333 0.00 0.00 43.00 2.24
1619 1623 6.262944 TCAACAACAGAGCATGTAAATCAACT 59.737 34.615 0.00 0.00 43.00 3.16
1620 1624 6.437928 TCAACAACAGAGCATGTAAATCAAC 58.562 36.000 0.00 0.00 43.00 3.18
1621 1625 6.631971 TCAACAACAGAGCATGTAAATCAA 57.368 33.333 0.00 0.00 43.00 2.57
1657 1661 6.269769 TCATACCATGATGTAGGCACTTATGA 59.730 38.462 0.00 0.00 35.15 2.15
1701 1705 2.891112 TCAAATGAAATTCGCCATGGC 58.109 42.857 27.67 27.67 33.67 4.40
1851 1855 4.523943 TGCAAACAGGCTTGTGAGAATATT 59.476 37.500 0.65 0.00 37.67 1.28
2336 2341 1.745489 CCTAAGGGAACTGCACGCC 60.745 63.158 0.00 0.00 42.68 5.68
2441 2446 5.744666 TTAAAGCAACACTGACTACCAAC 57.255 39.130 0.00 0.00 0.00 3.77
2489 2494 6.432162 TGCATCTCACAGAAGCTAAGAATTTT 59.568 34.615 2.73 0.00 39.47 1.82
2491 2496 5.494724 TGCATCTCACAGAAGCTAAGAATT 58.505 37.500 2.73 0.00 39.47 2.17
2492 2497 5.095145 TGCATCTCACAGAAGCTAAGAAT 57.905 39.130 2.73 0.00 39.47 2.40
2566 2571 8.987890 CACAATAAAAGGGTTAATGAAAACTGG 58.012 33.333 0.00 0.00 0.00 4.00
2618 2623 8.465999 TGGAAACACCATGATATGAAACAATAC 58.534 33.333 0.00 0.00 44.64 1.89
2659 2664 2.755103 CCTTTTGGGAATACTGGTCTGC 59.245 50.000 0.00 0.00 37.23 4.26
2664 2669 2.231235 GTGCACCTTTTGGGAATACTGG 59.769 50.000 5.22 0.00 46.08 4.00
2873 2878 4.516698 CCAATAGTGTATTCAGGATGTGGC 59.483 45.833 0.00 0.00 37.40 5.01
2891 2896 4.018506 TCAAAAGATGAGGTGCCTCCAATA 60.019 41.667 14.97 0.00 42.09 1.90
2958 2966 6.363065 ACGGAGGTAATAGATCTGTACAAGA 58.637 40.000 5.18 0.00 39.94 3.02
2980 2988 9.849166 AATGGTGTTAACTAATATTTTGGAACG 57.151 29.630 7.22 0.00 0.00 3.95
3061 3069 4.613925 TTTAGCCCAAATGCAATGAACA 57.386 36.364 4.54 0.00 0.00 3.18
3069 3077 2.093553 TGGATGCTTTTAGCCCAAATGC 60.094 45.455 10.59 10.59 43.91 3.56
3095 3103 7.041107 GGGAATTAGCATCAAATGTTTTAGCA 58.959 34.615 0.00 0.00 0.00 3.49
3216 3313 1.577736 AGTAGTTCAGGCTGGAGCAT 58.422 50.000 15.73 0.00 44.36 3.79
3241 3338 4.445385 GTCAGCAATTTTAAGCACAACAGG 59.555 41.667 0.00 0.00 0.00 4.00
3440 3537 4.284746 GGAGGCTTACCACTAAGATATGCT 59.715 45.833 0.00 0.00 39.06 3.79
3463 3560 5.389859 TCCAATGACATAAAACAAGCAGG 57.610 39.130 0.00 0.00 0.00 4.85
3473 3570 7.432869 CAAAACTGAAGGTTCCAATGACATAA 58.567 34.615 0.00 0.00 37.12 1.90
3500 3597 7.667219 AGACAAATCATCACTTCCAAATGTAGT 59.333 33.333 0.00 0.00 0.00 2.73
3504 3601 6.916440 TGAGACAAATCATCACTTCCAAATG 58.084 36.000 0.00 0.00 0.00 2.32
3518 3615 6.005583 TCTGCAGTTCAAATGAGACAAATC 57.994 37.500 14.67 0.00 0.00 2.17
3542 3639 2.418976 GCCTGTTATTCTTGGGTCGAAC 59.581 50.000 0.00 0.00 0.00 3.95
3569 3666 3.691118 GTCTTATTGCATCAACTGAGCCA 59.309 43.478 0.00 0.00 0.00 4.75
3578 3675 3.628942 GTGCCATCTGTCTTATTGCATCA 59.371 43.478 0.00 0.00 29.02 3.07
3659 3756 7.849496 CATGCTCTTACATGTTATGAGAACTC 58.151 38.462 19.68 0.00 42.05 3.01
3683 3780 7.962995 AGGAAGTTATATGAAGACTCTCACA 57.037 36.000 0.00 0.00 0.00 3.58
3684 3781 9.660180 AAAAGGAAGTTATATGAAGACTCTCAC 57.340 33.333 0.00 0.00 0.00 3.51
3740 3837 7.708752 GCATGGATCTAGCAAGTACCTATAATC 59.291 40.741 0.00 0.00 0.00 1.75
3741 3838 7.365117 GGCATGGATCTAGCAAGTACCTATAAT 60.365 40.741 0.00 0.00 0.00 1.28
3745 3844 3.578716 GGCATGGATCTAGCAAGTACCTA 59.421 47.826 0.00 0.00 0.00 3.08
3850 3949 5.641209 ACTAGACTACTTTGCTGCTGAATTG 59.359 40.000 0.00 0.00 0.00 2.32
3876 3975 2.546899 AGAGGTATACCACAGGCAACA 58.453 47.619 23.87 0.00 38.89 3.33
3877 3976 3.055385 TCAAGAGGTATACCACAGGCAAC 60.055 47.826 23.87 4.85 38.89 4.17
3924 4023 9.640963 GTACAGGTATGCTTTAATATCTCGATT 57.359 33.333 0.00 0.00 0.00 3.34
3950 4050 7.495606 AGGAAAAAGGTCAGCAAATACAAAAAG 59.504 33.333 0.00 0.00 0.00 2.27
3974 4075 0.247736 ACGCAGCTACTCCAGAAAGG 59.752 55.000 0.00 0.00 39.47 3.11
3987 4097 6.700520 AGGTTACAAATCTATTAGTACGCAGC 59.299 38.462 0.00 0.00 0.00 5.25
4006 4116 9.887629 AAAGCTACCTAAGATAAGAAAGGTTAC 57.112 33.333 0.00 0.00 42.34 2.50
4057 4167 9.614792 AGTATTACCAATTAACCATCAGAAGAC 57.385 33.333 0.00 0.00 0.00 3.01
4067 4177 8.483307 TTCTCGACAAGTATTACCAATTAACC 57.517 34.615 0.00 0.00 0.00 2.85
4124 4234 7.440523 AACCTAGAAGCAGAAATTACACAAG 57.559 36.000 0.00 0.00 0.00 3.16
4178 4288 9.480053 CAAAAATTGGAAGACACTGACATATTT 57.520 29.630 0.00 0.00 0.00 1.40
4198 4309 2.307934 AACACGCTGCCAACAAAAAT 57.692 40.000 0.00 0.00 0.00 1.82
4208 4319 1.299850 GTGGGGAAAAACACGCTGC 60.300 57.895 0.00 0.00 0.00 5.25
4221 4332 9.889128 ACAAGAATAAATGAAAATAATGTGGGG 57.111 29.630 0.00 0.00 0.00 4.96
4332 4451 4.750952 TGATGCGTACTCTATCTACAGC 57.249 45.455 0.00 0.00 0.00 4.40
4344 4463 3.804325 ACTGTGCAGAATATGATGCGTAC 59.196 43.478 6.17 3.10 45.54 3.67
4345 4464 4.058721 ACTGTGCAGAATATGATGCGTA 57.941 40.909 6.17 0.00 45.54 4.42
4365 4484 4.624882 TCTTTCATGCACACACACAAAAAC 59.375 37.500 0.00 0.00 0.00 2.43
4429 4548 2.031157 CCCTGGAAAAGTTGTTGTAGCG 60.031 50.000 0.00 0.00 0.00 4.26
4440 4559 2.388735 GGGAATTAGGCCCTGGAAAAG 58.611 52.381 0.00 0.00 42.56 2.27
4445 4564 0.771755 GTAGGGGAATTAGGCCCTGG 59.228 60.000 0.00 0.00 45.30 4.45
4465 4625 2.202395 GGCAAAAGGCTGCACAGGA 61.202 57.895 0.50 0.00 44.52 3.86
4537 4697 2.205911 GCAAAGAGCGAGGATAGGAAC 58.794 52.381 0.00 0.00 0.00 3.62
4598 4761 4.084900 ACTTCGTAAAAACATTCGTCGTCC 60.085 41.667 0.00 0.00 0.00 4.79
4599 4762 4.998295 ACTTCGTAAAAACATTCGTCGTC 58.002 39.130 0.00 0.00 0.00 4.20
4600 4763 5.393902 AACTTCGTAAAAACATTCGTCGT 57.606 34.783 0.00 0.00 0.00 4.34
4737 4900 6.632909 TCATCCAAAAGGCATTAATGAGTTG 58.367 36.000 19.73 14.39 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.