Multiple sequence alignment - TraesCS5A01G188600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G188600 chr5A 100.000 4307 0 0 1 4307 390245439 390241133 0.000000e+00 7954.0
1 TraesCS5A01G188600 chr5A 89.438 2386 189 25 947 3311 400573439 400575782 0.000000e+00 2952.0
2 TraesCS5A01G188600 chr5A 90.061 986 74 7 2422 3384 400769942 400768958 0.000000e+00 1256.0
3 TraesCS5A01G188600 chr5A 99.349 614 4 0 3694 4307 568922637 568923250 0.000000e+00 1112.0
4 TraesCS5A01G188600 chr5A 87.814 837 70 16 896 1710 400777742 400776916 0.000000e+00 952.0
5 TraesCS5A01G188600 chr5A 86.370 741 81 12 1706 2436 400773700 400772970 0.000000e+00 791.0
6 TraesCS5A01G188600 chr5A 87.931 58 4 3 3705 3760 472700930 472700874 1.000000e-06 65.8
7 TraesCS5A01G188600 chr5B 94.197 2447 124 12 1230 3674 352382592 352385022 0.000000e+00 3716.0
8 TraesCS5A01G188600 chr5B 88.724 2492 204 37 868 3311 339288839 339286377 0.000000e+00 2974.0
9 TraesCS5A01G188600 chr5B 89.787 1694 140 12 1642 3311 338960074 338961758 0.000000e+00 2139.0
10 TraesCS5A01G188600 chr5B 89.787 1694 140 12 1642 3311 338965578 338967262 0.000000e+00 2139.0
11 TraesCS5A01G188600 chr5B 88.897 1351 115 13 1971 3311 339080295 339078970 0.000000e+00 1631.0
12 TraesCS5A01G188600 chr5B 91.667 756 41 10 866 1606 338959323 338960071 0.000000e+00 1027.0
13 TraesCS5A01G188600 chr5B 91.667 756 41 10 866 1606 338964827 338965575 0.000000e+00 1027.0
14 TraesCS5A01G188600 chr5B 91.265 664 47 7 956 1617 339089782 339089128 0.000000e+00 894.0
15 TraesCS5A01G188600 chr5B 85.333 300 34 7 1684 1975 339081372 339081075 7.000000e-78 302.0
16 TraesCS5A01G188600 chr5B 92.929 198 13 1 622 818 352380698 352380895 1.960000e-73 287.0
17 TraesCS5A01G188600 chr5B 84.328 134 5 6 692 815 338959201 338959328 2.720000e-22 117.0
18 TraesCS5A01G188600 chr5B 84.328 134 5 6 692 815 338964705 338964832 2.720000e-22 117.0
19 TraesCS5A01G188600 chr5D 93.991 2463 123 9 866 3311 307093281 307095735 0.000000e+00 3705.0
20 TraesCS5A01G188600 chr5D 89.335 2466 202 27 874 3311 298463606 298461174 0.000000e+00 3040.0
21 TraesCS5A01G188600 chr5D 90.118 1690 140 9 1640 3311 298281771 298280091 0.000000e+00 2170.0
22 TraesCS5A01G188600 chr5D 88.305 1693 142 16 1640 3311 298143569 298145226 0.000000e+00 1978.0
23 TraesCS5A01G188600 chr5D 91.884 653 42 7 956 1606 298142925 298143568 0.000000e+00 902.0
24 TraesCS5A01G188600 chr5D 94.977 219 6 2 602 819 307093077 307093291 5.330000e-89 339.0
25 TraesCS5A01G188600 chr5D 87.195 164 12 5 3538 3693 307185896 307186058 1.230000e-40 178.0
26 TraesCS5A01G188600 chr4A 99.674 614 2 0 3694 4307 661672603 661673216 0.000000e+00 1123.0
27 TraesCS5A01G188600 chr6B 99.352 617 4 0 3691 4307 66789269 66788653 0.000000e+00 1118.0
28 TraesCS5A01G188600 chr6B 97.826 46 1 0 3693 3738 254721 254766 3.570000e-11 80.5
29 TraesCS5A01G188600 chr6A 99.512 615 2 1 3694 4307 581891094 581890480 0.000000e+00 1118.0
30 TraesCS5A01G188600 chr3D 92.816 348 24 1 1 348 459899370 459899024 1.790000e-138 503.0
31 TraesCS5A01G188600 chr2D 92.219 347 22 4 1 346 114634996 114635338 1.800000e-133 486.0
32 TraesCS5A01G188600 chr2D 91.643 347 28 1 1 346 159343561 159343215 3.010000e-131 479.0
33 TraesCS5A01G188600 chr7D 91.292 356 29 2 1 354 528484836 528484481 6.480000e-133 484.0
34 TraesCS5A01G188600 chr7D 91.667 348 28 1 1 348 139305534 139305880 8.380000e-132 481.0
35 TraesCS5A01G188600 chr4D 91.931 347 26 2 1 346 497925253 497924908 6.480000e-133 484.0
36 TraesCS5A01G188600 chr4B 91.549 355 25 2 1 350 18666904 18667258 6.480000e-133 484.0
37 TraesCS5A01G188600 chr1D 91.908 346 26 1 1 346 426441192 426441535 2.330000e-132 483.0
38 TraesCS5A01G188600 chr1D 91.268 355 22 1 1 346 400032237 400031883 3.900000e-130 475.0
39 TraesCS5A01G188600 chr3A 89.831 59 4 2 3700 3757 34475923 34475980 1.660000e-09 75.0
40 TraesCS5A01G188600 chr2A 93.750 48 3 0 3691 3738 734771598 734771645 5.970000e-09 73.1
41 TraesCS5A01G188600 chr2A 85.294 68 8 2 3690 3756 158255605 158255539 7.730000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G188600 chr5A 390241133 390245439 4306 True 7954.000000 7954 100.000000 1 4307 1 chr5A.!!$R1 4306
1 TraesCS5A01G188600 chr5A 400573439 400575782 2343 False 2952.000000 2952 89.438000 947 3311 1 chr5A.!!$F1 2364
2 TraesCS5A01G188600 chr5A 568922637 568923250 613 False 1112.000000 1112 99.349000 3694 4307 1 chr5A.!!$F2 613
3 TraesCS5A01G188600 chr5A 400768958 400777742 8784 True 999.666667 1256 88.081667 896 3384 3 chr5A.!!$R3 2488
4 TraesCS5A01G188600 chr5B 339286377 339288839 2462 True 2974.000000 2974 88.724000 868 3311 1 chr5B.!!$R2 2443
5 TraesCS5A01G188600 chr5B 352380698 352385022 4324 False 2001.500000 3716 93.563000 622 3674 2 chr5B.!!$F2 3052
6 TraesCS5A01G188600 chr5B 338959201 338967262 8061 False 1094.333333 2139 88.594000 692 3311 6 chr5B.!!$F1 2619
7 TraesCS5A01G188600 chr5B 339078970 339081372 2402 True 966.500000 1631 87.115000 1684 3311 2 chr5B.!!$R3 1627
8 TraesCS5A01G188600 chr5B 339089128 339089782 654 True 894.000000 894 91.265000 956 1617 1 chr5B.!!$R1 661
9 TraesCS5A01G188600 chr5D 298461174 298463606 2432 True 3040.000000 3040 89.335000 874 3311 1 chr5D.!!$R2 2437
10 TraesCS5A01G188600 chr5D 298280091 298281771 1680 True 2170.000000 2170 90.118000 1640 3311 1 chr5D.!!$R1 1671
11 TraesCS5A01G188600 chr5D 307093077 307095735 2658 False 2022.000000 3705 94.484000 602 3311 2 chr5D.!!$F3 2709
12 TraesCS5A01G188600 chr5D 298142925 298145226 2301 False 1440.000000 1978 90.094500 956 3311 2 chr5D.!!$F2 2355
13 TraesCS5A01G188600 chr4A 661672603 661673216 613 False 1123.000000 1123 99.674000 3694 4307 1 chr4A.!!$F1 613
14 TraesCS5A01G188600 chr6B 66788653 66789269 616 True 1118.000000 1118 99.352000 3691 4307 1 chr6B.!!$R1 616
15 TraesCS5A01G188600 chr6A 581890480 581891094 614 True 1118.000000 1118 99.512000 3694 4307 1 chr6A.!!$R1 613

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
186 187 0.023354 GTACGCGCGATGTCTGTTTC 59.977 55.0 39.36 5.08 0.00 2.78 F
262 263 0.038618 GACATTTGTCCGTTTGGGGC 60.039 55.0 0.00 0.00 42.42 5.80 F
400 401 0.046242 ATCCTCCCCTCCCATTGACA 59.954 55.0 0.00 0.00 0.00 3.58 F
1622 3012 0.035725 TTCCTCACGGTCGAGCTAGA 60.036 55.0 13.48 9.15 0.00 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1144 1196 0.167689 GTGAGGACGACGTAGGTGTC 59.832 60.0 0.00 1.55 35.49 3.67 R
1337 2727 0.677288 CACCCTGTCCTTGTACACGA 59.323 55.0 0.00 0.00 0.00 4.35 R
1798 6454 0.679002 TCTGAGGCAAAGCATCCTGC 60.679 55.0 0.98 0.00 45.46 4.85 R
3339 17393 0.396435 TGGCGGATCAACTCACAAGT 59.604 50.0 0.00 0.00 37.32 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.269562 TTTGGTATGGACGGCCGG 59.730 61.111 31.76 11.88 36.79 6.13
18 19 3.332445 TTTGGTATGGACGGCCGGG 62.332 63.158 31.76 2.28 36.79 5.73
49 50 3.231736 GGAGGCGGCCGGAGAATA 61.232 66.667 29.38 0.00 0.00 1.75
50 51 2.340443 GAGGCGGCCGGAGAATAG 59.660 66.667 29.38 0.00 0.00 1.73
51 52 3.867700 GAGGCGGCCGGAGAATAGC 62.868 68.421 29.38 6.89 0.00 2.97
56 57 2.663188 GCCGGAGAATAGCGGCAG 60.663 66.667 5.05 0.00 45.77 4.85
57 58 2.663188 CCGGAGAATAGCGGCAGC 60.663 66.667 0.00 0.00 45.58 5.25
102 103 4.966787 GGGGTGCAGGCGTTGGAA 62.967 66.667 0.00 0.00 0.00 3.53
103 104 3.365265 GGGTGCAGGCGTTGGAAG 61.365 66.667 0.00 0.00 0.00 3.46
104 105 4.043200 GGTGCAGGCGTTGGAAGC 62.043 66.667 0.00 0.00 0.00 3.86
105 106 4.389576 GTGCAGGCGTTGGAAGCG 62.390 66.667 0.00 0.00 35.00 4.68
106 107 4.617520 TGCAGGCGTTGGAAGCGA 62.618 61.111 0.00 0.00 35.00 4.93
107 108 3.353836 GCAGGCGTTGGAAGCGAA 61.354 61.111 0.00 0.00 35.00 4.70
108 109 2.690778 GCAGGCGTTGGAAGCGAAT 61.691 57.895 0.00 0.00 35.00 3.34
109 110 1.135315 CAGGCGTTGGAAGCGAATG 59.865 57.895 0.00 0.00 35.00 2.67
110 111 2.040544 AGGCGTTGGAAGCGAATGG 61.041 57.895 0.00 0.00 35.00 3.16
111 112 2.038269 GGCGTTGGAAGCGAATGGA 61.038 57.895 0.00 0.00 35.00 3.41
112 113 1.134694 GCGTTGGAAGCGAATGGAC 59.865 57.895 0.00 0.00 0.00 4.02
113 114 1.298859 GCGTTGGAAGCGAATGGACT 61.299 55.000 0.00 0.00 0.00 3.85
114 115 0.443869 CGTTGGAAGCGAATGGACTG 59.556 55.000 0.00 0.00 0.00 3.51
115 116 0.169009 GTTGGAAGCGAATGGACTGC 59.831 55.000 0.00 0.00 0.00 4.40
116 117 0.036732 TTGGAAGCGAATGGACTGCT 59.963 50.000 0.00 0.00 41.60 4.24
117 118 0.901827 TGGAAGCGAATGGACTGCTA 59.098 50.000 0.00 0.00 38.17 3.49
118 119 1.134699 TGGAAGCGAATGGACTGCTAG 60.135 52.381 0.00 0.00 38.17 3.42
119 120 1.134670 GGAAGCGAATGGACTGCTAGT 60.135 52.381 0.00 0.00 38.17 2.57
120 121 2.100916 GGAAGCGAATGGACTGCTAGTA 59.899 50.000 0.00 0.00 38.17 1.82
121 122 3.243907 GGAAGCGAATGGACTGCTAGTAT 60.244 47.826 0.00 0.00 38.17 2.12
122 123 3.651803 AGCGAATGGACTGCTAGTATC 57.348 47.619 0.00 0.00 37.15 2.24
123 124 2.297597 AGCGAATGGACTGCTAGTATCC 59.702 50.000 0.00 0.00 37.15 2.59
124 125 2.610727 GCGAATGGACTGCTAGTATCCC 60.611 54.545 6.60 0.48 0.00 3.85
125 126 2.028930 CGAATGGACTGCTAGTATCCCC 60.029 54.545 6.60 0.00 0.00 4.81
126 127 1.633774 ATGGACTGCTAGTATCCCCG 58.366 55.000 6.60 0.00 0.00 5.73
127 128 0.554305 TGGACTGCTAGTATCCCCGA 59.446 55.000 6.60 0.00 0.00 5.14
128 129 0.960286 GGACTGCTAGTATCCCCGAC 59.040 60.000 0.00 0.00 0.00 4.79
129 130 1.688772 GACTGCTAGTATCCCCGACA 58.311 55.000 0.00 0.00 0.00 4.35
130 131 1.609555 GACTGCTAGTATCCCCGACAG 59.390 57.143 0.00 0.00 0.00 3.51
131 132 0.962489 CTGCTAGTATCCCCGACAGG 59.038 60.000 0.00 0.00 37.24 4.00
132 133 1.113517 TGCTAGTATCCCCGACAGGC 61.114 60.000 0.00 0.00 35.76 4.85
133 134 1.957562 CTAGTATCCCCGACAGGCG 59.042 63.158 0.00 0.00 40.47 5.52
181 182 4.547905 CCCGTACGCGCGATGTCT 62.548 66.667 39.36 16.91 36.67 3.41
182 183 3.312504 CCGTACGCGCGATGTCTG 61.313 66.667 39.36 18.33 36.67 3.51
183 184 2.576053 CGTACGCGCGATGTCTGT 60.576 61.111 39.36 15.18 0.00 3.41
184 185 2.150218 CGTACGCGCGATGTCTGTT 61.150 57.895 39.36 14.32 0.00 3.16
185 186 1.670971 CGTACGCGCGATGTCTGTTT 61.671 55.000 39.36 13.47 0.00 2.83
186 187 0.023354 GTACGCGCGATGTCTGTTTC 59.977 55.000 39.36 5.08 0.00 2.78
187 188 0.387494 TACGCGCGATGTCTGTTTCA 60.387 50.000 39.36 2.96 0.00 2.69
188 189 1.225475 CGCGCGATGTCTGTTTCAC 60.225 57.895 28.94 0.00 0.00 3.18
189 190 1.132640 GCGCGATGTCTGTTTCACC 59.867 57.895 12.10 0.00 0.00 4.02
190 191 1.787847 CGCGATGTCTGTTTCACCC 59.212 57.895 0.00 0.00 0.00 4.61
191 192 1.635663 CGCGATGTCTGTTTCACCCC 61.636 60.000 0.00 0.00 0.00 4.95
192 193 0.605319 GCGATGTCTGTTTCACCCCA 60.605 55.000 0.00 0.00 0.00 4.96
193 194 1.890876 CGATGTCTGTTTCACCCCAA 58.109 50.000 0.00 0.00 0.00 4.12
194 195 2.226330 CGATGTCTGTTTCACCCCAAA 58.774 47.619 0.00 0.00 0.00 3.28
195 196 2.031157 CGATGTCTGTTTCACCCCAAAC 60.031 50.000 0.00 0.00 36.87 2.93
196 197 2.818751 TGTCTGTTTCACCCCAAACT 57.181 45.000 0.00 0.00 37.20 2.66
197 198 2.650322 TGTCTGTTTCACCCCAAACTC 58.350 47.619 0.00 0.00 37.20 3.01
198 199 1.602377 GTCTGTTTCACCCCAAACTCG 59.398 52.381 0.00 0.00 37.20 4.18
199 200 0.951558 CTGTTTCACCCCAAACTCGG 59.048 55.000 0.00 0.00 37.20 4.63
200 201 1.104577 TGTTTCACCCCAAACTCGGC 61.105 55.000 0.00 0.00 37.20 5.54
201 202 1.894756 TTTCACCCCAAACTCGGCG 60.895 57.895 0.00 0.00 0.00 6.46
204 205 4.572571 ACCCCAAACTCGGCGCAA 62.573 61.111 10.83 0.00 0.00 4.85
205 206 3.737172 CCCCAAACTCGGCGCAAG 61.737 66.667 10.83 8.81 43.44 4.01
206 207 2.978010 CCCAAACTCGGCGCAAGT 60.978 61.111 10.83 9.58 41.68 3.16
207 208 2.551912 CCCAAACTCGGCGCAAGTT 61.552 57.895 18.46 18.46 38.59 2.66
208 209 1.358759 CCAAACTCGGCGCAAGTTT 59.641 52.632 25.63 25.63 45.41 2.66
209 210 0.589223 CCAAACTCGGCGCAAGTTTA 59.411 50.000 28.65 1.98 43.31 2.01
210 211 1.002251 CCAAACTCGGCGCAAGTTTAA 60.002 47.619 28.65 1.51 43.31 1.52
211 212 2.307049 CAAACTCGGCGCAAGTTTAAG 58.693 47.619 28.65 18.81 43.31 1.85
212 213 0.237498 AACTCGGCGCAAGTTTAAGC 59.763 50.000 18.46 0.00 33.19 3.09
213 214 1.134694 CTCGGCGCAAGTTTAAGCC 59.865 57.895 10.83 3.57 45.67 4.35
215 216 3.259930 GGCGCAAGTTTAAGCCGA 58.740 55.556 10.83 0.00 40.17 5.54
216 217 1.134694 GGCGCAAGTTTAAGCCGAG 59.865 57.895 10.83 0.00 40.17 4.63
217 218 1.134694 GCGCAAGTTTAAGCCGAGG 59.865 57.895 0.30 0.00 41.68 4.63
218 219 1.296056 GCGCAAGTTTAAGCCGAGGA 61.296 55.000 0.30 0.00 41.68 3.71
219 220 1.369625 CGCAAGTTTAAGCCGAGGAT 58.630 50.000 0.00 0.00 0.00 3.24
220 221 1.062587 CGCAAGTTTAAGCCGAGGATG 59.937 52.381 0.00 0.00 0.00 3.51
221 222 2.356135 GCAAGTTTAAGCCGAGGATGA 58.644 47.619 0.00 0.00 0.00 2.92
222 223 2.352960 GCAAGTTTAAGCCGAGGATGAG 59.647 50.000 0.00 0.00 0.00 2.90
223 224 3.600388 CAAGTTTAAGCCGAGGATGAGT 58.400 45.455 0.00 0.00 0.00 3.41
224 225 3.528597 AGTTTAAGCCGAGGATGAGTC 57.471 47.619 0.00 0.00 0.00 3.36
225 226 2.159226 AGTTTAAGCCGAGGATGAGTCG 60.159 50.000 0.00 0.00 37.17 4.18
226 227 1.758936 TTAAGCCGAGGATGAGTCGA 58.241 50.000 0.00 0.00 39.92 4.20
227 228 1.758936 TAAGCCGAGGATGAGTCGAA 58.241 50.000 0.00 0.00 39.92 3.71
228 229 0.895530 AAGCCGAGGATGAGTCGAAA 59.104 50.000 0.00 0.00 39.92 3.46
229 230 0.895530 AGCCGAGGATGAGTCGAAAA 59.104 50.000 0.00 0.00 39.92 2.29
230 231 1.000145 GCCGAGGATGAGTCGAAAAC 59.000 55.000 0.00 0.00 39.92 2.43
231 232 1.269166 CCGAGGATGAGTCGAAAACG 58.731 55.000 0.00 0.00 39.92 3.60
232 233 1.269166 CGAGGATGAGTCGAAAACGG 58.731 55.000 0.00 0.00 39.92 4.44
233 234 1.135489 CGAGGATGAGTCGAAAACGGA 60.135 52.381 0.00 0.00 39.92 4.69
234 235 2.260481 GAGGATGAGTCGAAAACGGAC 58.740 52.381 0.00 0.00 34.62 4.79
235 236 0.989890 GGATGAGTCGAAAACGGACG 59.010 55.000 0.00 0.00 39.38 4.79
236 237 0.989890 GATGAGTCGAAAACGGACGG 59.010 55.000 0.00 0.00 39.38 4.79
237 238 0.599558 ATGAGTCGAAAACGGACGGA 59.400 50.000 0.00 0.00 39.38 4.69
238 239 0.385029 TGAGTCGAAAACGGACGGAA 59.615 50.000 0.00 0.00 39.38 4.30
239 240 1.000060 TGAGTCGAAAACGGACGGAAT 60.000 47.619 0.00 0.00 39.38 3.01
240 241 1.652619 GAGTCGAAAACGGACGGAATC 59.347 52.381 0.00 0.00 39.38 2.52
241 242 0.717784 GTCGAAAACGGACGGAATCC 59.282 55.000 0.00 0.00 45.20 3.01
262 263 0.038618 GACATTTGTCCGTTTGGGGC 60.039 55.000 0.00 0.00 42.42 5.80
263 264 1.291906 CATTTGTCCGTTTGGGGCC 59.708 57.895 0.00 0.00 40.87 5.80
264 265 2.272447 ATTTGTCCGTTTGGGGCCG 61.272 57.895 0.00 0.00 40.87 6.13
284 285 3.937062 CGTTGGGCCGCGCTATTC 61.937 66.667 5.56 0.00 0.00 1.75
285 286 3.937062 GTTGGGCCGCGCTATTCG 61.937 66.667 5.56 0.00 42.12 3.34
286 287 4.460683 TTGGGCCGCGCTATTCGT 62.461 61.111 5.56 0.00 41.07 3.85
287 288 3.961838 TTGGGCCGCGCTATTCGTT 62.962 57.895 5.56 0.00 41.07 3.85
288 289 3.637030 GGGCCGCGCTATTCGTTC 61.637 66.667 5.56 0.00 41.07 3.95
289 290 2.888534 GGCCGCGCTATTCGTTCA 60.889 61.111 5.56 0.00 41.07 3.18
290 291 2.244651 GGCCGCGCTATTCGTTCAT 61.245 57.895 5.56 0.00 41.07 2.57
291 292 1.641677 GCCGCGCTATTCGTTCATT 59.358 52.632 5.56 0.00 41.07 2.57
292 293 0.383124 GCCGCGCTATTCGTTCATTC 60.383 55.000 5.56 0.00 41.07 2.67
293 294 1.209128 CCGCGCTATTCGTTCATTCT 58.791 50.000 5.56 0.00 41.07 2.40
294 295 2.390938 CCGCGCTATTCGTTCATTCTA 58.609 47.619 5.56 0.00 41.07 2.10
295 296 2.153247 CCGCGCTATTCGTTCATTCTAC 59.847 50.000 5.56 0.00 41.07 2.59
296 297 2.153247 CGCGCTATTCGTTCATTCTACC 59.847 50.000 5.56 0.00 41.07 3.18
297 298 2.475487 GCGCTATTCGTTCATTCTACCC 59.525 50.000 0.00 0.00 41.07 3.69
298 299 3.057734 CGCTATTCGTTCATTCTACCCC 58.942 50.000 0.00 0.00 0.00 4.95
299 300 3.491964 CGCTATTCGTTCATTCTACCCCA 60.492 47.826 0.00 0.00 0.00 4.96
300 301 4.448210 GCTATTCGTTCATTCTACCCCAA 58.552 43.478 0.00 0.00 0.00 4.12
301 302 4.879545 GCTATTCGTTCATTCTACCCCAAA 59.120 41.667 0.00 0.00 0.00 3.28
302 303 5.220796 GCTATTCGTTCATTCTACCCCAAAC 60.221 44.000 0.00 0.00 0.00 2.93
303 304 2.690786 TCGTTCATTCTACCCCAAACG 58.309 47.619 0.00 0.00 40.43 3.60
304 305 2.299582 TCGTTCATTCTACCCCAAACGA 59.700 45.455 4.24 4.24 44.09 3.85
305 306 3.068560 CGTTCATTCTACCCCAAACGAA 58.931 45.455 0.00 0.00 41.28 3.85
306 307 3.120442 CGTTCATTCTACCCCAAACGAAC 60.120 47.826 0.00 0.00 41.28 3.95
307 308 2.690786 TCATTCTACCCCAAACGAACG 58.309 47.619 0.00 0.00 0.00 3.95
308 309 1.129811 CATTCTACCCCAAACGAACGC 59.870 52.381 0.00 0.00 0.00 4.84
309 310 0.106335 TTCTACCCCAAACGAACGCA 59.894 50.000 0.00 0.00 0.00 5.24
310 311 0.600782 TCTACCCCAAACGAACGCAC 60.601 55.000 0.00 0.00 0.00 5.34
311 312 1.571215 CTACCCCAAACGAACGCACC 61.571 60.000 0.00 0.00 0.00 5.01
312 313 3.666253 CCCCAAACGAACGCACCC 61.666 66.667 0.00 0.00 0.00 4.61
313 314 4.020378 CCCAAACGAACGCACCCG 62.020 66.667 0.00 0.00 41.14 5.28
314 315 2.968156 CCAAACGAACGCACCCGA 60.968 61.111 0.00 0.00 38.29 5.14
315 316 2.535788 CCAAACGAACGCACCCGAA 61.536 57.895 0.00 0.00 38.29 4.30
316 317 1.368374 CAAACGAACGCACCCGAAC 60.368 57.895 0.00 0.00 38.29 3.95
317 318 1.814586 AAACGAACGCACCCGAACA 60.815 52.632 0.00 0.00 38.29 3.18
318 319 1.367599 AAACGAACGCACCCGAACAA 61.368 50.000 0.00 0.00 38.29 2.83
319 320 1.768112 AACGAACGCACCCGAACAAG 61.768 55.000 0.00 0.00 38.29 3.16
320 321 1.952133 CGAACGCACCCGAACAAGA 60.952 57.895 0.00 0.00 38.29 3.02
321 322 1.289109 CGAACGCACCCGAACAAGAT 61.289 55.000 0.00 0.00 38.29 2.40
322 323 0.165944 GAACGCACCCGAACAAGATG 59.834 55.000 0.00 0.00 38.29 2.90
323 324 1.234615 AACGCACCCGAACAAGATGG 61.235 55.000 0.00 0.00 38.29 3.51
327 328 4.637771 CCCGAACAAGATGGGGTC 57.362 61.111 0.00 0.00 39.39 4.46
328 329 1.449601 CCCGAACAAGATGGGGTCG 60.450 63.158 0.00 0.00 39.39 4.79
329 330 2.106683 CCGAACAAGATGGGGTCGC 61.107 63.158 0.00 0.00 0.00 5.19
330 331 2.452813 CGAACAAGATGGGGTCGCG 61.453 63.158 0.00 0.00 0.00 5.87
331 332 2.746277 AACAAGATGGGGTCGCGC 60.746 61.111 0.00 0.00 0.00 6.86
347 348 2.349755 GCGGTGGAGTTGGCCTTA 59.650 61.111 3.32 0.00 0.00 2.69
348 349 2.038837 GCGGTGGAGTTGGCCTTAC 61.039 63.158 3.32 1.81 0.00 2.34
349 350 1.373435 CGGTGGAGTTGGCCTTACA 59.627 57.895 3.32 0.00 0.00 2.41
350 351 0.250553 CGGTGGAGTTGGCCTTACAA 60.251 55.000 3.32 0.00 0.00 2.41
355 356 4.934316 GTTGGCCTTACAACCCCA 57.066 55.556 3.32 0.00 43.72 4.96
356 357 3.135027 GTTGGCCTTACAACCCCAA 57.865 52.632 3.32 0.00 43.72 4.12
357 358 1.415200 GTTGGCCTTACAACCCCAAA 58.585 50.000 3.32 0.00 43.72 3.28
358 359 1.069513 GTTGGCCTTACAACCCCAAAC 59.930 52.381 3.32 0.00 43.72 2.93
359 360 0.261991 TGGCCTTACAACCCCAAACA 59.738 50.000 3.32 0.00 0.00 2.83
360 361 1.133009 TGGCCTTACAACCCCAAACAT 60.133 47.619 3.32 0.00 0.00 2.71
361 362 1.974957 GGCCTTACAACCCCAAACATT 59.025 47.619 0.00 0.00 0.00 2.71
362 363 2.370519 GGCCTTACAACCCCAAACATTT 59.629 45.455 0.00 0.00 0.00 2.32
363 364 3.579151 GGCCTTACAACCCCAAACATTTA 59.421 43.478 0.00 0.00 0.00 1.40
364 365 4.040584 GGCCTTACAACCCCAAACATTTAA 59.959 41.667 0.00 0.00 0.00 1.52
365 366 5.454897 GGCCTTACAACCCCAAACATTTAAA 60.455 40.000 0.00 0.00 0.00 1.52
366 367 6.056236 GCCTTACAACCCCAAACATTTAAAA 58.944 36.000 0.00 0.00 0.00 1.52
367 368 6.017770 GCCTTACAACCCCAAACATTTAAAAC 60.018 38.462 0.00 0.00 0.00 2.43
368 369 6.483974 CCTTACAACCCCAAACATTTAAAACC 59.516 38.462 0.00 0.00 0.00 3.27
369 370 5.437191 ACAACCCCAAACATTTAAAACCA 57.563 34.783 0.00 0.00 0.00 3.67
370 371 5.816682 ACAACCCCAAACATTTAAAACCAA 58.183 33.333 0.00 0.00 0.00 3.67
371 372 6.427441 ACAACCCCAAACATTTAAAACCAAT 58.573 32.000 0.00 0.00 0.00 3.16
372 373 6.319911 ACAACCCCAAACATTTAAAACCAATG 59.680 34.615 0.00 0.00 37.60 2.82
373 374 6.253946 ACCCCAAACATTTAAAACCAATGA 57.746 33.333 0.00 0.00 35.51 2.57
374 375 6.295249 ACCCCAAACATTTAAAACCAATGAG 58.705 36.000 0.00 0.00 35.51 2.90
375 376 5.704978 CCCCAAACATTTAAAACCAATGAGG 59.295 40.000 0.00 0.00 45.67 3.86
376 377 6.465035 CCCCAAACATTTAAAACCAATGAGGA 60.465 38.462 0.00 0.00 41.22 3.71
377 378 7.167535 CCCAAACATTTAAAACCAATGAGGAT 58.832 34.615 0.00 0.00 41.22 3.24
378 379 7.665145 CCCAAACATTTAAAACCAATGAGGATT 59.335 33.333 0.00 0.00 41.22 3.01
379 380 8.720562 CCAAACATTTAAAACCAATGAGGATTC 58.279 33.333 0.00 0.00 41.22 2.52
380 381 9.270640 CAAACATTTAAAACCAATGAGGATTCA 57.729 29.630 0.00 0.00 41.22 2.57
381 382 9.844257 AAACATTTAAAACCAATGAGGATTCAA 57.156 25.926 0.00 0.00 41.22 2.69
383 384 9.657419 ACATTTAAAACCAATGAGGATTCAATC 57.343 29.630 0.00 0.00 41.22 2.67
393 394 0.774276 GGATTCAATCCTCCCCTCCC 59.226 60.000 9.43 0.00 46.19 4.30
394 395 1.522900 GATTCAATCCTCCCCTCCCA 58.477 55.000 0.00 0.00 0.00 4.37
395 396 2.068977 GATTCAATCCTCCCCTCCCAT 58.931 52.381 0.00 0.00 0.00 4.00
396 397 2.000290 TTCAATCCTCCCCTCCCATT 58.000 50.000 0.00 0.00 0.00 3.16
397 398 1.225373 TCAATCCTCCCCTCCCATTG 58.775 55.000 0.00 0.00 0.00 2.82
398 399 1.225373 CAATCCTCCCCTCCCATTGA 58.775 55.000 0.00 0.00 0.00 2.57
399 400 1.133668 CAATCCTCCCCTCCCATTGAC 60.134 57.143 0.00 0.00 0.00 3.18
400 401 0.046242 ATCCTCCCCTCCCATTGACA 59.954 55.000 0.00 0.00 0.00 3.58
401 402 0.914417 TCCTCCCCTCCCATTGACAC 60.914 60.000 0.00 0.00 0.00 3.67
402 403 1.221840 CTCCCCTCCCATTGACACG 59.778 63.158 0.00 0.00 0.00 4.49
403 404 1.537889 TCCCCTCCCATTGACACGT 60.538 57.895 0.00 0.00 0.00 4.49
404 405 1.131303 TCCCCTCCCATTGACACGTT 61.131 55.000 0.00 0.00 0.00 3.99
405 406 0.251165 CCCCTCCCATTGACACGTTT 60.251 55.000 0.00 0.00 0.00 3.60
406 407 1.616159 CCCTCCCATTGACACGTTTT 58.384 50.000 0.00 0.00 0.00 2.43
407 408 1.269448 CCCTCCCATTGACACGTTTTG 59.731 52.381 0.00 0.00 0.00 2.44
408 409 2.226330 CCTCCCATTGACACGTTTTGA 58.774 47.619 0.00 0.00 0.00 2.69
409 410 2.031157 CCTCCCATTGACACGTTTTGAC 60.031 50.000 0.00 0.00 0.00 3.18
410 411 1.950909 TCCCATTGACACGTTTTGACC 59.049 47.619 0.00 0.00 0.00 4.02
411 412 1.000717 CCCATTGACACGTTTTGACCC 60.001 52.381 0.00 0.00 0.00 4.46
412 413 1.678627 CCATTGACACGTTTTGACCCA 59.321 47.619 0.00 0.00 0.00 4.51
413 414 2.287547 CCATTGACACGTTTTGACCCAG 60.288 50.000 0.00 0.00 0.00 4.45
414 415 2.116827 TTGACACGTTTTGACCCAGT 57.883 45.000 0.00 0.00 0.00 4.00
415 416 2.116827 TGACACGTTTTGACCCAGTT 57.883 45.000 0.00 0.00 0.00 3.16
416 417 1.740585 TGACACGTTTTGACCCAGTTG 59.259 47.619 0.00 0.00 0.00 3.16
417 418 2.011222 GACACGTTTTGACCCAGTTGA 58.989 47.619 0.00 0.00 0.00 3.18
418 419 1.741145 ACACGTTTTGACCCAGTTGAC 59.259 47.619 0.00 0.00 0.00 3.18
419 420 1.064952 CACGTTTTGACCCAGTTGACC 59.935 52.381 0.00 0.00 0.00 4.02
420 421 1.340211 ACGTTTTGACCCAGTTGACCA 60.340 47.619 0.00 0.00 0.00 4.02
421 422 1.953686 CGTTTTGACCCAGTTGACCAT 59.046 47.619 0.00 0.00 0.00 3.55
422 423 2.031157 CGTTTTGACCCAGTTGACCATC 60.031 50.000 0.00 0.00 0.00 3.51
423 424 2.286365 TTTGACCCAGTTGACCATCC 57.714 50.000 0.00 0.00 0.00 3.51
424 425 1.144691 TTGACCCAGTTGACCATCCA 58.855 50.000 0.00 0.00 0.00 3.41
425 426 0.692476 TGACCCAGTTGACCATCCAG 59.308 55.000 0.00 0.00 0.00 3.86
426 427 0.984230 GACCCAGTTGACCATCCAGA 59.016 55.000 0.00 0.00 0.00 3.86
427 428 1.561542 GACCCAGTTGACCATCCAGAT 59.438 52.381 0.00 0.00 0.00 2.90
428 429 2.771943 GACCCAGTTGACCATCCAGATA 59.228 50.000 0.00 0.00 0.00 1.98
429 430 2.774234 ACCCAGTTGACCATCCAGATAG 59.226 50.000 0.00 0.00 0.00 2.08
430 431 2.486191 CCCAGTTGACCATCCAGATAGC 60.486 54.545 0.00 0.00 0.00 2.97
431 432 2.171237 CCAGTTGACCATCCAGATAGCA 59.829 50.000 0.00 0.00 0.00 3.49
432 433 3.370846 CCAGTTGACCATCCAGATAGCAA 60.371 47.826 0.00 0.00 0.00 3.91
433 434 3.875727 CAGTTGACCATCCAGATAGCAAG 59.124 47.826 0.00 0.00 0.00 4.01
434 435 2.615912 GTTGACCATCCAGATAGCAAGC 59.384 50.000 0.00 0.00 0.00 4.01
435 436 1.141657 TGACCATCCAGATAGCAAGCC 59.858 52.381 0.00 0.00 0.00 4.35
436 437 1.141657 GACCATCCAGATAGCAAGCCA 59.858 52.381 0.00 0.00 0.00 4.75
437 438 1.133976 ACCATCCAGATAGCAAGCCAC 60.134 52.381 0.00 0.00 0.00 5.01
438 439 1.224075 CATCCAGATAGCAAGCCACG 58.776 55.000 0.00 0.00 0.00 4.94
439 440 0.833287 ATCCAGATAGCAAGCCACGT 59.167 50.000 0.00 0.00 0.00 4.49
440 441 0.175760 TCCAGATAGCAAGCCACGTC 59.824 55.000 0.00 0.00 0.00 4.34
441 442 0.108186 CCAGATAGCAAGCCACGTCA 60.108 55.000 0.00 0.00 0.00 4.35
442 443 1.284657 CAGATAGCAAGCCACGTCAG 58.715 55.000 0.00 0.00 0.00 3.51
443 444 0.460987 AGATAGCAAGCCACGTCAGC 60.461 55.000 0.00 0.00 0.00 4.26
444 445 0.740868 GATAGCAAGCCACGTCAGCA 60.741 55.000 9.59 0.00 0.00 4.41
445 446 0.321564 ATAGCAAGCCACGTCAGCAA 60.322 50.000 9.59 0.00 0.00 3.91
446 447 0.533978 TAGCAAGCCACGTCAGCAAA 60.534 50.000 9.59 0.00 0.00 3.68
447 448 1.065600 GCAAGCCACGTCAGCAAAA 59.934 52.632 9.59 0.00 0.00 2.44
448 449 0.527385 GCAAGCCACGTCAGCAAAAA 60.527 50.000 9.59 0.00 0.00 1.94
558 559 9.630098 AATCAAGAAAACAATACTAAGCACATG 57.370 29.630 0.00 0.00 0.00 3.21
559 560 7.592938 TCAAGAAAACAATACTAAGCACATGG 58.407 34.615 0.00 0.00 0.00 3.66
560 561 7.446931 TCAAGAAAACAATACTAAGCACATGGA 59.553 33.333 0.00 0.00 0.00 3.41
561 562 7.759489 AGAAAACAATACTAAGCACATGGAA 57.241 32.000 0.00 0.00 0.00 3.53
562 563 8.177119 AGAAAACAATACTAAGCACATGGAAA 57.823 30.769 0.00 0.00 0.00 3.13
563 564 8.637986 AGAAAACAATACTAAGCACATGGAAAA 58.362 29.630 0.00 0.00 0.00 2.29
564 565 8.816640 AAAACAATACTAAGCACATGGAAAAG 57.183 30.769 0.00 0.00 0.00 2.27
565 566 7.524717 AACAATACTAAGCACATGGAAAAGT 57.475 32.000 0.00 0.00 0.00 2.66
566 567 7.524717 ACAATACTAAGCACATGGAAAAGTT 57.475 32.000 0.00 0.00 0.00 2.66
567 568 7.951591 ACAATACTAAGCACATGGAAAAGTTT 58.048 30.769 0.00 0.00 0.00 2.66
568 569 8.421002 ACAATACTAAGCACATGGAAAAGTTTT 58.579 29.630 0.00 0.00 0.00 2.43
569 570 9.906660 CAATACTAAGCACATGGAAAAGTTTTA 57.093 29.630 0.00 0.00 0.00 1.52
573 574 8.088365 ACTAAGCACATGGAAAAGTTTTAATCC 58.912 33.333 0.00 0.00 0.00 3.01
574 575 6.670695 AGCACATGGAAAAGTTTTAATCCT 57.329 33.333 0.00 0.00 33.02 3.24
575 576 6.691508 AGCACATGGAAAAGTTTTAATCCTC 58.308 36.000 0.00 0.00 33.02 3.71
576 577 6.267471 AGCACATGGAAAAGTTTTAATCCTCA 59.733 34.615 0.00 0.00 33.02 3.86
577 578 6.366061 GCACATGGAAAAGTTTTAATCCTCAC 59.634 38.462 0.00 0.00 33.02 3.51
578 579 6.582295 CACATGGAAAAGTTTTAATCCTCACG 59.418 38.462 0.00 0.00 33.02 4.35
579 580 6.264518 ACATGGAAAAGTTTTAATCCTCACGT 59.735 34.615 0.00 0.00 33.02 4.49
580 581 6.067263 TGGAAAAGTTTTAATCCTCACGTG 57.933 37.500 9.94 9.94 33.02 4.49
581 582 5.591067 TGGAAAAGTTTTAATCCTCACGTGT 59.409 36.000 16.51 0.00 33.02 4.49
582 583 5.912955 GGAAAAGTTTTAATCCTCACGTGTG 59.087 40.000 16.51 13.39 0.00 3.82
583 584 6.445357 AAAAGTTTTAATCCTCACGTGTGT 57.555 33.333 16.51 0.00 0.00 3.72
584 585 7.254863 GGAAAAGTTTTAATCCTCACGTGTGTA 60.255 37.037 16.51 0.00 0.00 2.90
585 586 6.535274 AAGTTTTAATCCTCACGTGTGTAC 57.465 37.500 16.51 2.69 0.00 2.90
586 587 4.992951 AGTTTTAATCCTCACGTGTGTACC 59.007 41.667 16.51 0.00 0.00 3.34
587 588 3.598019 TTAATCCTCACGTGTGTACCC 57.402 47.619 16.51 0.00 0.00 3.69
588 589 1.344065 AATCCTCACGTGTGTACCCA 58.656 50.000 16.51 0.00 0.00 4.51
589 590 1.344065 ATCCTCACGTGTGTACCCAA 58.656 50.000 16.51 0.00 0.00 4.12
590 591 1.121378 TCCTCACGTGTGTACCCAAA 58.879 50.000 16.51 0.00 0.00 3.28
591 592 1.485480 TCCTCACGTGTGTACCCAAAA 59.515 47.619 16.51 0.00 0.00 2.44
592 593 1.600485 CCTCACGTGTGTACCCAAAAC 59.400 52.381 16.51 0.00 0.00 2.43
593 594 2.281517 CTCACGTGTGTACCCAAAACA 58.718 47.619 16.51 0.00 0.00 2.83
594 595 2.875933 CTCACGTGTGTACCCAAAACAT 59.124 45.455 16.51 0.00 0.00 2.71
595 596 2.873472 TCACGTGTGTACCCAAAACATC 59.127 45.455 16.51 0.00 0.00 3.06
596 597 2.614520 CACGTGTGTACCCAAAACATCA 59.385 45.455 7.58 0.00 0.00 3.07
597 598 3.065510 CACGTGTGTACCCAAAACATCAA 59.934 43.478 7.58 0.00 0.00 2.57
598 599 3.886505 ACGTGTGTACCCAAAACATCAAT 59.113 39.130 0.00 0.00 0.00 2.57
599 600 4.023536 ACGTGTGTACCCAAAACATCAATC 60.024 41.667 0.00 0.00 0.00 2.67
600 601 4.023622 CGTGTGTACCCAAAACATCAATCA 60.024 41.667 0.00 0.00 0.00 2.57
661 662 3.217626 GCATTTAGCTTCCACTAGCCAT 58.782 45.455 0.00 0.00 42.20 4.40
772 773 6.398234 TGGTAATGCAAGCTTCAAACTAAA 57.602 33.333 0.00 0.00 0.00 1.85
819 829 7.646526 CAGGTGTGTGATGCAATAATTTATCAG 59.353 37.037 0.00 0.00 30.86 2.90
822 832 9.357652 GTGTGTGATGCAATAATTTATCAGTTT 57.642 29.630 0.00 0.00 30.86 2.66
823 833 9.926158 TGTGTGATGCAATAATTTATCAGTTTT 57.074 25.926 0.00 0.00 30.86 2.43
825 835 9.368674 TGTGATGCAATAATTTATCAGTTTTGG 57.631 29.630 0.00 0.00 30.86 3.28
826 836 9.369904 GTGATGCAATAATTTATCAGTTTTGGT 57.630 29.630 0.00 0.00 30.86 3.67
836 846 8.986477 ATTTATCAGTTTTGGTAAAGCACATC 57.014 30.769 0.36 0.00 41.74 3.06
837 847 7.759489 TTATCAGTTTTGGTAAAGCACATCT 57.241 32.000 0.00 0.00 27.06 2.90
838 848 8.856153 TTATCAGTTTTGGTAAAGCACATCTA 57.144 30.769 0.00 0.00 27.06 1.98
839 849 6.801539 TCAGTTTTGGTAAAGCACATCTAG 57.198 37.500 0.00 0.00 0.00 2.43
840 850 6.296026 TCAGTTTTGGTAAAGCACATCTAGT 58.704 36.000 0.00 0.00 0.00 2.57
841 851 7.446769 TCAGTTTTGGTAAAGCACATCTAGTA 58.553 34.615 0.00 0.00 0.00 1.82
842 852 7.934665 TCAGTTTTGGTAAAGCACATCTAGTAA 59.065 33.333 0.00 0.00 0.00 2.24
843 853 8.564574 CAGTTTTGGTAAAGCACATCTAGTAAA 58.435 33.333 0.00 0.00 0.00 2.01
844 854 9.297037 AGTTTTGGTAAAGCACATCTAGTAAAT 57.703 29.630 0.00 0.00 0.00 1.40
849 859 8.836413 TGGTAAAGCACATCTAGTAAATATTGC 58.164 33.333 0.00 0.00 0.00 3.56
850 860 8.836413 GGTAAAGCACATCTAGTAAATATTGCA 58.164 33.333 0.00 0.00 0.00 4.08
851 861 9.651718 GTAAAGCACATCTAGTAAATATTGCAC 57.348 33.333 0.00 0.00 0.00 4.57
852 862 7.864108 AAGCACATCTAGTAAATATTGCACA 57.136 32.000 0.00 0.00 0.00 4.57
853 863 8.455903 AAGCACATCTAGTAAATATTGCACAT 57.544 30.769 0.00 0.00 0.00 3.21
854 864 8.092521 AGCACATCTAGTAAATATTGCACATC 57.907 34.615 0.00 0.00 0.00 3.06
855 865 7.935755 AGCACATCTAGTAAATATTGCACATCT 59.064 33.333 0.00 0.00 0.00 2.90
856 866 9.208022 GCACATCTAGTAAATATTGCACATCTA 57.792 33.333 0.00 0.00 0.00 1.98
861 871 9.982651 TCTAGTAAATATTGCACATCTAAGTCC 57.017 33.333 0.00 0.00 0.00 3.85
862 872 9.988815 CTAGTAAATATTGCACATCTAAGTCCT 57.011 33.333 0.00 0.00 0.00 3.85
864 874 9.765795 AGTAAATATTGCACATCTAAGTCCTAC 57.234 33.333 0.00 0.00 0.00 3.18
865 875 9.542462 GTAAATATTGCACATCTAAGTCCTACA 57.458 33.333 0.00 0.00 0.00 2.74
871 881 9.632638 ATTGCACATCTAAGTCCTACATAATTT 57.367 29.630 0.00 0.00 0.00 1.82
902 922 0.953727 TGCATTGTCCTGCTGAACAC 59.046 50.000 0.00 0.00 42.75 3.32
929 949 1.736365 TTGTCCGGTAGCGTCACACA 61.736 55.000 13.99 7.47 0.00 3.72
981 1020 1.648720 CACTGCAACCACAACCTCG 59.351 57.895 0.00 0.00 0.00 4.63
985 1029 2.954753 GCAACCACAACCTCGCTCG 61.955 63.158 0.00 0.00 0.00 5.03
1082 1128 1.908793 CACACTCCTCCGTCACCCT 60.909 63.158 0.00 0.00 0.00 4.34
1083 1129 1.606889 ACACTCCTCCGTCACCCTC 60.607 63.158 0.00 0.00 0.00 4.30
1084 1130 1.606601 CACTCCTCCGTCACCCTCA 60.607 63.158 0.00 0.00 0.00 3.86
1085 1131 1.606889 ACTCCTCCGTCACCCTCAC 60.607 63.158 0.00 0.00 0.00 3.51
1107 1153 1.068333 CAGAAACCCAAGAACGCCATG 60.068 52.381 0.00 0.00 0.00 3.66
1144 1196 1.736586 CCTCATCCTTCGACCTCGG 59.263 63.158 0.00 0.00 40.29 4.63
1153 1205 1.300971 TTCGACCTCGGACACCTACG 61.301 60.000 0.00 0.00 40.29 3.51
1224 1276 2.949909 TTGGTACGCGTCCATGGCT 61.950 57.895 24.38 0.00 34.75 4.75
1241 1293 1.371183 CTGGCGAGAACTCCAACCA 59.629 57.895 0.00 0.00 30.09 3.67
1249 2639 1.303317 AACTCCAACCACATCCGCC 60.303 57.895 0.00 0.00 0.00 6.13
1399 2789 2.671070 CGTGGTTCATGGGCCTCT 59.329 61.111 4.53 0.00 0.00 3.69
1606 2996 4.388499 TCGGCGCCAAGTCCTTCC 62.388 66.667 28.98 0.00 0.00 3.46
1607 2997 4.394712 CGGCGCCAAGTCCTTCCT 62.395 66.667 28.98 0.00 0.00 3.36
1608 2998 2.436824 GGCGCCAAGTCCTTCCTC 60.437 66.667 24.80 0.00 0.00 3.71
1609 2999 2.347490 GCGCCAAGTCCTTCCTCA 59.653 61.111 0.00 0.00 0.00 3.86
1610 3000 2.035442 GCGCCAAGTCCTTCCTCAC 61.035 63.158 0.00 0.00 0.00 3.51
1611 3001 1.738099 CGCCAAGTCCTTCCTCACG 60.738 63.158 0.00 0.00 0.00 4.35
1612 3002 1.376037 GCCAAGTCCTTCCTCACGG 60.376 63.158 0.00 0.00 0.00 4.94
1613 3003 2.058675 CCAAGTCCTTCCTCACGGT 58.941 57.895 0.00 0.00 0.00 4.83
1614 3004 0.037232 CCAAGTCCTTCCTCACGGTC 60.037 60.000 0.00 0.00 0.00 4.79
1615 3005 0.388649 CAAGTCCTTCCTCACGGTCG 60.389 60.000 0.00 0.00 0.00 4.79
1616 3006 0.538977 AAGTCCTTCCTCACGGTCGA 60.539 55.000 0.00 0.00 0.00 4.20
1617 3007 0.961358 AGTCCTTCCTCACGGTCGAG 60.961 60.000 0.00 1.98 0.00 4.04
1618 3008 2.182030 CCTTCCTCACGGTCGAGC 59.818 66.667 4.06 4.06 0.00 5.03
1619 3009 2.344203 CCTTCCTCACGGTCGAGCT 61.344 63.158 13.48 0.00 0.00 4.09
1620 3010 1.030488 CCTTCCTCACGGTCGAGCTA 61.030 60.000 13.48 0.00 0.00 3.32
1621 3011 0.378962 CTTCCTCACGGTCGAGCTAG 59.621 60.000 13.48 7.22 0.00 3.42
1622 3012 0.035725 TTCCTCACGGTCGAGCTAGA 60.036 55.000 13.48 9.15 0.00 2.43
1623 3013 0.462225 TCCTCACGGTCGAGCTAGAG 60.462 60.000 19.87 19.87 0.00 2.43
1624 3014 1.440938 CCTCACGGTCGAGCTAGAGG 61.441 65.000 26.81 26.81 36.98 3.69
1625 3015 1.440938 CTCACGGTCGAGCTAGAGGG 61.441 65.000 19.35 4.58 0.00 4.30
1626 3016 2.829458 ACGGTCGAGCTAGAGGGC 60.829 66.667 13.48 0.00 0.00 5.19
1627 3017 3.955101 CGGTCGAGCTAGAGGGCG 61.955 72.222 13.48 0.00 37.29 6.13
1628 3018 3.597728 GGTCGAGCTAGAGGGCGG 61.598 72.222 7.51 0.00 37.29 6.13
1629 3019 2.829458 GTCGAGCTAGAGGGCGGT 60.829 66.667 0.00 0.00 37.29 5.68
1630 3020 2.829003 TCGAGCTAGAGGGCGGTG 60.829 66.667 0.00 0.00 37.29 4.94
1631 3021 3.905678 CGAGCTAGAGGGCGGTGG 61.906 72.222 0.00 0.00 37.29 4.61
1632 3022 4.228567 GAGCTAGAGGGCGGTGGC 62.229 72.222 0.00 0.00 37.29 5.01
1821 6486 0.723981 GATGCTTTGCCTCAGACGTC 59.276 55.000 7.70 7.70 0.00 4.34
1872 6537 1.617947 GCGTGGACCTCCTCTCCATT 61.618 60.000 0.00 0.00 40.04 3.16
1881 6546 0.104855 TCCTCTCCATTTCCATCGCG 59.895 55.000 0.00 0.00 0.00 5.87
2114 7579 1.080025 GGCAGTCCCTGTACGACAC 60.080 63.158 0.00 0.00 33.43 3.67
2229 7700 4.394712 GTGGTGTGCTCCCGGGAG 62.395 72.222 41.29 41.29 44.56 4.30
2253 7724 2.873288 GCTTCGGCTGGCTTTGAG 59.127 61.111 0.00 0.00 38.08 3.02
2688 11205 0.677731 CCCTGATCAAGAAGCGGCAA 60.678 55.000 1.45 0.00 0.00 4.52
2773 11290 2.509336 GCAGGGACATCGTGGACG 60.509 66.667 0.00 0.00 41.45 4.79
2918 11455 2.033194 GCACCCTCAACTACACGGC 61.033 63.158 0.00 0.00 0.00 5.68
3075 17116 4.555709 ACCAAGGTGTCGGCGCAA 62.556 61.111 10.83 0.00 0.00 4.85
3185 17226 2.202623 GAGGAGCTACACCGTGCG 60.203 66.667 0.00 0.00 0.00 5.34
3294 17335 4.699522 AGCCCCGTCGCCTTCAAC 62.700 66.667 0.00 0.00 0.00 3.18
3312 17366 1.142748 CTGGGACGACTGATGCCTC 59.857 63.158 0.00 0.00 0.00 4.70
3334 17388 2.101249 AGCTCTGAGAGAGTAATGCTGC 59.899 50.000 14.78 0.00 44.12 5.25
3335 17389 2.101249 GCTCTGAGAGAGTAATGCTGCT 59.899 50.000 14.78 0.00 44.12 4.24
3336 17390 3.708890 CTCTGAGAGAGTAATGCTGCTG 58.291 50.000 2.60 0.00 37.57 4.41
3338 17392 3.119209 TCTGAGAGAGTAATGCTGCTGTG 60.119 47.826 0.00 0.00 0.00 3.66
3339 17393 2.827921 TGAGAGAGTAATGCTGCTGTGA 59.172 45.455 0.00 0.00 0.00 3.58
3340 17394 3.186119 GAGAGAGTAATGCTGCTGTGAC 58.814 50.000 0.00 0.00 0.00 3.67
3342 17396 3.260380 AGAGAGTAATGCTGCTGTGACTT 59.740 43.478 0.00 0.00 0.00 3.01
3343 17397 3.332919 AGAGTAATGCTGCTGTGACTTG 58.667 45.455 0.00 0.00 0.00 3.16
3344 17398 3.070018 GAGTAATGCTGCTGTGACTTGT 58.930 45.455 0.00 0.00 0.00 3.16
3356 17410 1.461127 GTGACTTGTGAGTTGATCCGC 59.539 52.381 0.00 0.00 35.88 5.54
3415 17485 8.547967 TGCGAAGAAGGGAATAATTATCATAC 57.452 34.615 0.00 0.00 0.00 2.39
3416 17486 7.330946 TGCGAAGAAGGGAATAATTATCATACG 59.669 37.037 0.00 0.00 0.00 3.06
3417 17487 7.544566 GCGAAGAAGGGAATAATTATCATACGA 59.455 37.037 0.00 0.00 0.00 3.43
3434 17504 2.947852 ACGATGTTTCTTCTCCTGTCG 58.052 47.619 0.00 0.00 0.00 4.35
3444 17514 3.196469 TCTTCTCCTGTCGAATTGCATCT 59.804 43.478 0.00 0.00 0.00 2.90
3445 17515 2.897436 TCTCCTGTCGAATTGCATCTG 58.103 47.619 0.00 0.00 0.00 2.90
3446 17516 1.938577 CTCCTGTCGAATTGCATCTGG 59.061 52.381 0.00 0.00 0.00 3.86
3459 17529 4.284829 TGCATCTGGTAATTGTGTCTGA 57.715 40.909 0.00 0.00 0.00 3.27
3466 17536 4.000325 TGGTAATTGTGTCTGAACCATCG 59.000 43.478 0.00 0.00 32.24 3.84
3481 17551 2.286833 ACCATCGTCGTCAAACTTGTTG 59.713 45.455 0.00 0.00 0.00 3.33
3502 17572 4.522114 TGGAATCATTGCTTCAATCCGTA 58.478 39.130 2.95 0.00 31.05 4.02
3508 17578 4.404394 TCATTGCTTCAATCCGTAGACCTA 59.596 41.667 0.00 0.00 31.05 3.08
3529 17599 5.345202 CCTACGTAGTACTTCACTTTTGCAG 59.655 44.000 20.73 0.00 45.11 4.41
3577 17647 5.756195 TGAAAGAATCTTCCACAACACTG 57.244 39.130 0.00 0.00 0.00 3.66
3578 17648 5.436175 TGAAAGAATCTTCCACAACACTGA 58.564 37.500 0.00 0.00 0.00 3.41
3583 17653 1.486310 TCTTCCACAACACTGACAGCT 59.514 47.619 1.25 0.00 0.00 4.24
3584 17654 1.600957 CTTCCACAACACTGACAGCTG 59.399 52.381 13.48 13.48 0.00 4.24
3621 17691 6.557304 GAATGCATTCAGAAGGAACTTGGGA 61.557 44.000 30.15 0.00 42.13 4.37
3622 17692 7.970671 GAATGCATTCAGAAGGAACTTGGGAA 61.971 42.308 30.15 0.00 42.13 3.97
3648 17718 5.739752 TGCATATGAGTTCCGAAGAAATG 57.260 39.130 6.97 0.00 32.58 2.32
3670 17740 5.809001 TGTTCCAACATTCTTAGAGCATCT 58.191 37.500 0.00 0.00 41.12 2.90
3672 17742 7.076417 TGTTCCAACATTCTTAGAGCATCTCC 61.076 42.308 0.00 0.00 39.48 3.71
3673 17743 9.374750 TGTTCCAACATTCTTAGAGCATCTCCA 62.375 40.741 0.00 0.00 39.48 3.86
3680 17750 4.416533 GAGCATCTCCAGCTGACG 57.583 61.111 17.39 5.51 43.58 4.35
3681 17751 1.882167 GAGCATCTCCAGCTGACGC 60.882 63.158 17.39 9.84 43.58 5.19
3682 17752 2.125391 GCATCTCCAGCTGACGCA 60.125 61.111 17.39 0.00 39.10 5.24
3683 17753 1.523258 GCATCTCCAGCTGACGCAT 60.523 57.895 17.39 0.00 39.10 4.73
3684 17754 1.497223 GCATCTCCAGCTGACGCATC 61.497 60.000 17.39 0.00 39.10 3.91
3685 17755 0.179092 CATCTCCAGCTGACGCATCA 60.179 55.000 17.39 0.00 39.10 3.07
3686 17756 0.538584 ATCTCCAGCTGACGCATCAA 59.461 50.000 17.39 0.00 39.10 2.57
3687 17757 0.108472 TCTCCAGCTGACGCATCAAG 60.108 55.000 17.39 0.00 39.10 3.02
3688 17758 0.390866 CTCCAGCTGACGCATCAAGT 60.391 55.000 17.39 0.00 39.10 3.16
3689 17759 0.035317 TCCAGCTGACGCATCAAGTT 59.965 50.000 17.39 0.00 39.10 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.269562 CCGGCCGTCCATACCAAA 59.730 61.111 26.12 0.00 0.00 3.28
1 2 3.788145 CCCGGCCGTCCATACCAA 61.788 66.667 26.12 0.00 0.00 3.67
31 32 3.751049 TATTCTCCGGCCGCCTCCT 62.751 63.158 22.85 6.29 0.00 3.69
32 33 3.227792 CTATTCTCCGGCCGCCTCC 62.228 68.421 22.85 0.00 0.00 4.30
33 34 2.340443 CTATTCTCCGGCCGCCTC 59.660 66.667 22.85 0.00 0.00 4.70
34 35 3.930012 GCTATTCTCCGGCCGCCT 61.930 66.667 22.85 3.88 0.00 5.52
40 41 2.663188 GCTGCCGCTATTCTCCGG 60.663 66.667 0.00 0.00 46.94 5.14
41 42 3.032609 CGCTGCCGCTATTCTCCG 61.033 66.667 0.00 0.00 0.00 4.63
85 86 4.966787 TTCCAACGCCTGCACCCC 62.967 66.667 0.00 0.00 0.00 4.95
86 87 3.365265 CTTCCAACGCCTGCACCC 61.365 66.667 0.00 0.00 0.00 4.61
87 88 4.043200 GCTTCCAACGCCTGCACC 62.043 66.667 0.00 0.00 0.00 5.01
88 89 4.389576 CGCTTCCAACGCCTGCAC 62.390 66.667 0.00 0.00 0.00 4.57
89 90 4.617520 TCGCTTCCAACGCCTGCA 62.618 61.111 0.00 0.00 0.00 4.41
90 91 2.690778 ATTCGCTTCCAACGCCTGC 61.691 57.895 0.00 0.00 0.00 4.85
91 92 1.135315 CATTCGCTTCCAACGCCTG 59.865 57.895 0.00 0.00 0.00 4.85
92 93 2.040544 CCATTCGCTTCCAACGCCT 61.041 57.895 0.00 0.00 0.00 5.52
93 94 2.038269 TCCATTCGCTTCCAACGCC 61.038 57.895 0.00 0.00 0.00 5.68
94 95 1.134694 GTCCATTCGCTTCCAACGC 59.865 57.895 0.00 0.00 0.00 4.84
95 96 0.443869 CAGTCCATTCGCTTCCAACG 59.556 55.000 0.00 0.00 0.00 4.10
96 97 0.169009 GCAGTCCATTCGCTTCCAAC 59.831 55.000 0.00 0.00 0.00 3.77
97 98 0.036732 AGCAGTCCATTCGCTTCCAA 59.963 50.000 0.00 0.00 29.87 3.53
98 99 0.901827 TAGCAGTCCATTCGCTTCCA 59.098 50.000 0.00 0.00 37.20 3.53
99 100 1.134670 ACTAGCAGTCCATTCGCTTCC 60.135 52.381 0.00 0.00 37.20 3.46
100 101 2.301577 ACTAGCAGTCCATTCGCTTC 57.698 50.000 0.00 0.00 37.20 3.86
101 102 3.243907 GGATACTAGCAGTCCATTCGCTT 60.244 47.826 4.29 0.00 37.20 4.68
102 103 2.297597 GGATACTAGCAGTCCATTCGCT 59.702 50.000 4.29 0.00 39.80 4.93
103 104 2.610727 GGGATACTAGCAGTCCATTCGC 60.611 54.545 9.93 0.00 33.62 4.70
104 105 2.028930 GGGGATACTAGCAGTCCATTCG 60.029 54.545 9.93 0.00 33.62 3.34
105 106 2.028930 CGGGGATACTAGCAGTCCATTC 60.029 54.545 9.93 0.82 33.62 2.67
106 107 1.971357 CGGGGATACTAGCAGTCCATT 59.029 52.381 9.93 0.00 33.62 3.16
107 108 1.147191 TCGGGGATACTAGCAGTCCAT 59.853 52.381 9.93 0.00 33.62 3.41
108 109 0.554305 TCGGGGATACTAGCAGTCCA 59.446 55.000 9.93 0.00 33.62 4.02
109 110 0.960286 GTCGGGGATACTAGCAGTCC 59.040 60.000 0.00 0.00 0.00 3.85
110 111 1.609555 CTGTCGGGGATACTAGCAGTC 59.390 57.143 0.00 0.00 0.00 3.51
111 112 1.693627 CTGTCGGGGATACTAGCAGT 58.306 55.000 0.00 0.00 0.00 4.40
112 113 0.962489 CCTGTCGGGGATACTAGCAG 59.038 60.000 0.00 0.00 0.00 4.24
113 114 1.113517 GCCTGTCGGGGATACTAGCA 61.114 60.000 0.00 0.00 35.12 3.49
114 115 1.666580 GCCTGTCGGGGATACTAGC 59.333 63.158 0.00 0.00 35.12 3.42
115 116 1.957562 CGCCTGTCGGGGATACTAG 59.042 63.158 0.00 0.00 45.63 2.57
116 117 4.169271 CGCCTGTCGGGGATACTA 57.831 61.111 0.00 0.00 45.63 1.82
165 166 3.312504 CAGACATCGCGCGTACGG 61.313 66.667 30.98 18.97 40.57 4.02
166 167 1.670971 AAACAGACATCGCGCGTACG 61.671 55.000 30.98 20.68 44.07 3.67
167 168 0.023354 GAAACAGACATCGCGCGTAC 59.977 55.000 30.98 18.26 0.00 3.67
168 169 0.387494 TGAAACAGACATCGCGCGTA 60.387 50.000 30.98 17.05 0.00 4.42
169 170 1.663388 TGAAACAGACATCGCGCGT 60.663 52.632 30.98 14.63 0.00 6.01
170 171 1.225475 GTGAAACAGACATCGCGCG 60.225 57.895 26.76 26.76 36.32 6.86
171 172 1.132640 GGTGAAACAGACATCGCGC 59.867 57.895 0.00 0.00 39.98 6.86
172 173 1.635663 GGGGTGAAACAGACATCGCG 61.636 60.000 0.00 0.00 39.98 5.87
173 174 0.605319 TGGGGTGAAACAGACATCGC 60.605 55.000 0.00 0.00 39.98 4.58
174 175 1.890876 TTGGGGTGAAACAGACATCG 58.109 50.000 0.00 0.00 39.98 3.84
175 176 3.222603 AGTTTGGGGTGAAACAGACATC 58.777 45.455 0.00 0.00 39.98 3.06
176 177 3.222603 GAGTTTGGGGTGAAACAGACAT 58.777 45.455 0.00 0.00 39.98 3.06
177 178 2.650322 GAGTTTGGGGTGAAACAGACA 58.350 47.619 0.00 0.00 39.98 3.41
178 179 1.602377 CGAGTTTGGGGTGAAACAGAC 59.398 52.381 0.00 0.00 39.98 3.51
179 180 1.476110 CCGAGTTTGGGGTGAAACAGA 60.476 52.381 0.00 0.00 39.98 3.41
180 181 0.951558 CCGAGTTTGGGGTGAAACAG 59.048 55.000 0.00 0.00 39.98 3.16
181 182 1.104577 GCCGAGTTTGGGGTGAAACA 61.105 55.000 0.00 0.00 39.98 2.83
182 183 1.658114 GCCGAGTTTGGGGTGAAAC 59.342 57.895 0.00 0.00 36.28 2.78
183 184 1.894756 CGCCGAGTTTGGGGTGAAA 60.895 57.895 0.00 0.00 37.20 2.69
184 185 2.281208 CGCCGAGTTTGGGGTGAA 60.281 61.111 0.00 0.00 37.20 3.18
187 188 4.572571 TTGCGCCGAGTTTGGGGT 62.573 61.111 4.18 0.00 43.50 4.95
188 189 3.737172 CTTGCGCCGAGTTTGGGG 61.737 66.667 4.18 0.00 44.36 4.96
189 190 2.070654 AAACTTGCGCCGAGTTTGGG 62.071 55.000 27.70 3.91 43.80 4.12
190 191 0.589223 TAAACTTGCGCCGAGTTTGG 59.411 50.000 32.18 9.36 44.71 3.28
191 192 2.307049 CTTAAACTTGCGCCGAGTTTG 58.693 47.619 32.18 20.73 44.71 2.93
192 193 1.334689 GCTTAAACTTGCGCCGAGTTT 60.335 47.619 29.59 29.59 46.17 2.66
193 194 0.237498 GCTTAAACTTGCGCCGAGTT 59.763 50.000 17.47 17.47 39.51 3.01
194 195 1.574702 GGCTTAAACTTGCGCCGAGT 61.575 55.000 4.18 6.29 32.22 4.18
195 196 1.134694 GGCTTAAACTTGCGCCGAG 59.865 57.895 4.18 5.52 32.22 4.63
196 197 3.259930 GGCTTAAACTTGCGCCGA 58.740 55.556 4.18 0.00 32.22 5.54
198 199 1.134694 CTCGGCTTAAACTTGCGCC 59.865 57.895 4.18 0.00 39.14 6.53
199 200 1.134694 CCTCGGCTTAAACTTGCGC 59.865 57.895 0.00 0.00 0.00 6.09
200 201 1.062587 CATCCTCGGCTTAAACTTGCG 59.937 52.381 0.00 0.00 0.00 4.85
201 202 2.352960 CTCATCCTCGGCTTAAACTTGC 59.647 50.000 0.00 0.00 0.00 4.01
202 203 3.600388 ACTCATCCTCGGCTTAAACTTG 58.400 45.455 0.00 0.00 0.00 3.16
203 204 3.676324 CGACTCATCCTCGGCTTAAACTT 60.676 47.826 0.00 0.00 0.00 2.66
204 205 2.159226 CGACTCATCCTCGGCTTAAACT 60.159 50.000 0.00 0.00 0.00 2.66
205 206 2.159282 TCGACTCATCCTCGGCTTAAAC 60.159 50.000 0.00 0.00 0.00 2.01
206 207 2.097036 TCGACTCATCCTCGGCTTAAA 58.903 47.619 0.00 0.00 0.00 1.52
207 208 1.758936 TCGACTCATCCTCGGCTTAA 58.241 50.000 0.00 0.00 0.00 1.85
208 209 1.758936 TTCGACTCATCCTCGGCTTA 58.241 50.000 0.00 0.00 0.00 3.09
209 210 0.895530 TTTCGACTCATCCTCGGCTT 59.104 50.000 0.00 0.00 0.00 4.35
210 211 0.895530 TTTTCGACTCATCCTCGGCT 59.104 50.000 0.00 0.00 0.00 5.52
211 212 1.000145 GTTTTCGACTCATCCTCGGC 59.000 55.000 0.00 0.00 0.00 5.54
231 232 1.014352 CAAATGTCCGGATTCCGTCC 58.986 55.000 22.83 13.25 46.80 4.79
232 233 1.664151 GACAAATGTCCGGATTCCGTC 59.336 52.381 22.83 15.53 46.80 4.79
233 234 1.734163 GACAAATGTCCGGATTCCGT 58.266 50.000 22.83 1.21 46.80 4.69
243 244 0.038618 GCCCCAAACGGACAAATGTC 60.039 55.000 4.96 4.96 44.04 3.06
244 245 1.468506 GGCCCCAAACGGACAAATGT 61.469 55.000 0.00 0.00 0.00 2.71
245 246 1.291906 GGCCCCAAACGGACAAATG 59.708 57.895 0.00 0.00 0.00 2.32
246 247 2.272447 CGGCCCCAAACGGACAAAT 61.272 57.895 0.00 0.00 0.00 2.32
247 248 2.907917 CGGCCCCAAACGGACAAA 60.908 61.111 0.00 0.00 0.00 2.83
267 268 3.937062 GAATAGCGCGGCCCAACG 61.937 66.667 8.83 0.00 0.00 4.10
268 269 3.937062 CGAATAGCGCGGCCCAAC 61.937 66.667 8.83 0.00 0.00 3.77
269 270 3.961838 AACGAATAGCGCGGCCCAA 62.962 57.895 8.83 0.00 46.04 4.12
270 271 4.460683 AACGAATAGCGCGGCCCA 62.461 61.111 8.83 0.00 46.04 5.36
271 272 3.637030 GAACGAATAGCGCGGCCC 61.637 66.667 8.83 0.00 46.04 5.80
272 273 1.772063 AATGAACGAATAGCGCGGCC 61.772 55.000 8.83 0.00 46.04 6.13
273 274 0.383124 GAATGAACGAATAGCGCGGC 60.383 55.000 8.83 0.00 46.04 6.53
274 275 1.209128 AGAATGAACGAATAGCGCGG 58.791 50.000 8.83 0.00 46.04 6.46
275 276 2.153247 GGTAGAATGAACGAATAGCGCG 59.847 50.000 0.00 0.00 46.04 6.86
276 277 2.475487 GGGTAGAATGAACGAATAGCGC 59.525 50.000 0.00 0.00 46.04 5.92
278 279 4.067972 TGGGGTAGAATGAACGAATAGC 57.932 45.455 0.00 0.00 0.00 2.97
279 280 5.006358 CGTTTGGGGTAGAATGAACGAATAG 59.994 44.000 0.00 0.00 41.47 1.73
280 281 4.871557 CGTTTGGGGTAGAATGAACGAATA 59.128 41.667 0.00 0.00 41.47 1.75
281 282 3.687698 CGTTTGGGGTAGAATGAACGAAT 59.312 43.478 0.00 0.00 41.47 3.34
282 283 3.068560 CGTTTGGGGTAGAATGAACGAA 58.931 45.455 0.00 0.00 41.47 3.85
283 284 2.299582 TCGTTTGGGGTAGAATGAACGA 59.700 45.455 5.19 5.19 44.19 3.85
284 285 2.690786 TCGTTTGGGGTAGAATGAACG 58.309 47.619 0.00 0.00 40.63 3.95
285 286 3.120442 CGTTCGTTTGGGGTAGAATGAAC 60.120 47.826 9.84 9.84 43.38 3.18
286 287 3.068560 CGTTCGTTTGGGGTAGAATGAA 58.931 45.455 0.00 0.00 32.93 2.57
287 288 2.690786 CGTTCGTTTGGGGTAGAATGA 58.309 47.619 0.00 0.00 32.93 2.57
288 289 1.129811 GCGTTCGTTTGGGGTAGAATG 59.870 52.381 0.00 0.00 33.95 2.67
289 290 1.270947 TGCGTTCGTTTGGGGTAGAAT 60.271 47.619 0.00 0.00 0.00 2.40
290 291 0.106335 TGCGTTCGTTTGGGGTAGAA 59.894 50.000 0.00 0.00 0.00 2.10
291 292 0.600782 GTGCGTTCGTTTGGGGTAGA 60.601 55.000 0.00 0.00 0.00 2.59
292 293 1.571215 GGTGCGTTCGTTTGGGGTAG 61.571 60.000 0.00 0.00 0.00 3.18
293 294 1.597578 GGTGCGTTCGTTTGGGGTA 60.598 57.895 0.00 0.00 0.00 3.69
294 295 2.903350 GGTGCGTTCGTTTGGGGT 60.903 61.111 0.00 0.00 0.00 4.95
295 296 3.666253 GGGTGCGTTCGTTTGGGG 61.666 66.667 0.00 0.00 0.00 4.96
296 297 4.020378 CGGGTGCGTTCGTTTGGG 62.020 66.667 0.00 0.00 0.00 4.12
297 298 2.535788 TTCGGGTGCGTTCGTTTGG 61.536 57.895 0.00 0.00 0.00 3.28
298 299 1.368374 GTTCGGGTGCGTTCGTTTG 60.368 57.895 0.00 0.00 0.00 2.93
299 300 1.367599 TTGTTCGGGTGCGTTCGTTT 61.368 50.000 0.00 0.00 0.00 3.60
300 301 1.768112 CTTGTTCGGGTGCGTTCGTT 61.768 55.000 0.00 0.00 0.00 3.85
301 302 2.202905 TTGTTCGGGTGCGTTCGT 60.203 55.556 0.00 0.00 0.00 3.85
302 303 1.289109 ATCTTGTTCGGGTGCGTTCG 61.289 55.000 0.00 0.00 0.00 3.95
303 304 0.165944 CATCTTGTTCGGGTGCGTTC 59.834 55.000 0.00 0.00 0.00 3.95
304 305 1.234615 CCATCTTGTTCGGGTGCGTT 61.235 55.000 0.00 0.00 0.00 4.84
305 306 1.671054 CCATCTTGTTCGGGTGCGT 60.671 57.895 0.00 0.00 0.00 5.24
306 307 2.398554 CCCATCTTGTTCGGGTGCG 61.399 63.158 0.00 0.00 35.03 5.34
307 308 2.046285 CCCCATCTTGTTCGGGTGC 61.046 63.158 0.00 0.00 38.40 5.01
308 309 4.319133 CCCCATCTTGTTCGGGTG 57.681 61.111 0.00 0.00 38.40 4.61
309 310 3.916184 ACCCCATCTTGTTCGGGT 58.084 55.556 0.00 0.00 44.24 5.28
310 311 1.449601 CGACCCCATCTTGTTCGGG 60.450 63.158 0.00 0.00 41.71 5.14
311 312 2.106683 GCGACCCCATCTTGTTCGG 61.107 63.158 0.00 0.00 0.00 4.30
312 313 2.452813 CGCGACCCCATCTTGTTCG 61.453 63.158 0.00 0.00 0.00 3.95
313 314 2.750888 GCGCGACCCCATCTTGTTC 61.751 63.158 12.10 0.00 0.00 3.18
314 315 2.746277 GCGCGACCCCATCTTGTT 60.746 61.111 12.10 0.00 0.00 2.83
329 330 3.599285 TAAGGCCAACTCCACCGCG 62.599 63.158 5.01 0.00 0.00 6.46
330 331 2.038837 GTAAGGCCAACTCCACCGC 61.039 63.158 5.01 0.00 0.00 5.68
331 332 0.250553 TTGTAAGGCCAACTCCACCG 60.251 55.000 5.01 0.00 0.00 4.94
332 333 1.244816 GTTGTAAGGCCAACTCCACC 58.755 55.000 5.01 0.00 41.17 4.61
333 334 1.244816 GGTTGTAAGGCCAACTCCAC 58.755 55.000 5.01 1.73 43.36 4.02
334 335 0.111639 GGGTTGTAAGGCCAACTCCA 59.888 55.000 5.01 0.00 43.36 3.86
335 336 2.957060 GGGTTGTAAGGCCAACTCC 58.043 57.895 5.01 9.61 43.36 3.85
336 337 0.111639 TGGGGTTGTAAGGCCAACTC 59.888 55.000 5.01 0.00 43.64 3.01
337 338 0.558712 TTGGGGTTGTAAGGCCAACT 59.441 50.000 5.01 0.00 43.36 3.16
338 339 1.069513 GTTTGGGGTTGTAAGGCCAAC 59.930 52.381 5.01 2.84 43.15 3.77
339 340 1.343075 TGTTTGGGGTTGTAAGGCCAA 60.343 47.619 5.01 0.00 0.00 4.52
340 341 0.261991 TGTTTGGGGTTGTAAGGCCA 59.738 50.000 5.01 0.00 0.00 5.36
341 342 1.639722 ATGTTTGGGGTTGTAAGGCC 58.360 50.000 0.00 0.00 0.00 5.19
342 343 3.762407 AAATGTTTGGGGTTGTAAGGC 57.238 42.857 0.00 0.00 0.00 4.35
343 344 6.483974 GGTTTTAAATGTTTGGGGTTGTAAGG 59.516 38.462 0.00 0.00 0.00 2.69
344 345 7.048512 TGGTTTTAAATGTTTGGGGTTGTAAG 58.951 34.615 0.00 0.00 0.00 2.34
345 346 6.954232 TGGTTTTAAATGTTTGGGGTTGTAA 58.046 32.000 0.00 0.00 0.00 2.41
346 347 6.555463 TGGTTTTAAATGTTTGGGGTTGTA 57.445 33.333 0.00 0.00 0.00 2.41
347 348 5.437191 TGGTTTTAAATGTTTGGGGTTGT 57.563 34.783 0.00 0.00 0.00 3.32
348 349 6.543831 TCATTGGTTTTAAATGTTTGGGGTTG 59.456 34.615 0.00 0.00 36.58 3.77
349 350 6.663734 TCATTGGTTTTAAATGTTTGGGGTT 58.336 32.000 0.00 0.00 36.58 4.11
350 351 6.253946 TCATTGGTTTTAAATGTTTGGGGT 57.746 33.333 0.00 0.00 36.58 4.95
351 352 5.704978 CCTCATTGGTTTTAAATGTTTGGGG 59.295 40.000 0.00 0.00 36.58 4.96
352 353 6.529220 TCCTCATTGGTTTTAAATGTTTGGG 58.471 36.000 0.00 0.00 36.58 4.12
353 354 8.620116 AATCCTCATTGGTTTTAAATGTTTGG 57.380 30.769 0.00 0.00 36.58 3.28
354 355 9.270640 TGAATCCTCATTGGTTTTAAATGTTTG 57.729 29.630 0.00 0.00 36.58 2.93
355 356 9.844257 TTGAATCCTCATTGGTTTTAAATGTTT 57.156 25.926 0.00 0.00 36.58 2.83
357 358 9.657419 GATTGAATCCTCATTGGTTTTAAATGT 57.343 29.630 0.00 0.00 36.58 2.71
358 359 9.101655 GGATTGAATCCTCATTGGTTTTAAATG 57.898 33.333 16.79 0.00 46.19 2.32
375 376 1.522900 TGGGAGGGGAGGATTGAATC 58.477 55.000 0.00 0.00 0.00 2.52
376 377 2.178544 CAATGGGAGGGGAGGATTGAAT 59.821 50.000 0.00 0.00 0.00 2.57
377 378 1.570501 CAATGGGAGGGGAGGATTGAA 59.429 52.381 0.00 0.00 0.00 2.69
378 379 1.225373 CAATGGGAGGGGAGGATTGA 58.775 55.000 0.00 0.00 0.00 2.57
379 380 1.133668 GTCAATGGGAGGGGAGGATTG 60.134 57.143 0.00 0.00 0.00 2.67
380 381 1.226311 GTCAATGGGAGGGGAGGATT 58.774 55.000 0.00 0.00 0.00 3.01
381 382 0.046242 TGTCAATGGGAGGGGAGGAT 59.954 55.000 0.00 0.00 0.00 3.24
382 383 0.914417 GTGTCAATGGGAGGGGAGGA 60.914 60.000 0.00 0.00 0.00 3.71
383 384 1.609783 GTGTCAATGGGAGGGGAGG 59.390 63.158 0.00 0.00 0.00 4.30
384 385 1.221840 CGTGTCAATGGGAGGGGAG 59.778 63.158 0.00 0.00 0.00 4.30
385 386 1.131303 AACGTGTCAATGGGAGGGGA 61.131 55.000 0.00 0.00 0.00 4.81
386 387 0.251165 AAACGTGTCAATGGGAGGGG 60.251 55.000 0.00 0.00 0.00 4.79
387 388 1.269448 CAAAACGTGTCAATGGGAGGG 59.731 52.381 0.00 0.00 0.00 4.30
388 389 2.031157 GTCAAAACGTGTCAATGGGAGG 60.031 50.000 0.00 0.00 0.00 4.30
389 390 2.031157 GGTCAAAACGTGTCAATGGGAG 60.031 50.000 0.00 0.00 0.00 4.30
390 391 1.950909 GGTCAAAACGTGTCAATGGGA 59.049 47.619 0.00 0.00 0.00 4.37
391 392 1.000717 GGGTCAAAACGTGTCAATGGG 60.001 52.381 0.00 0.00 0.00 4.00
392 393 1.678627 TGGGTCAAAACGTGTCAATGG 59.321 47.619 0.00 0.00 0.00 3.16
393 394 2.357637 ACTGGGTCAAAACGTGTCAATG 59.642 45.455 0.00 0.00 0.00 2.82
394 395 2.650322 ACTGGGTCAAAACGTGTCAAT 58.350 42.857 0.00 0.00 0.00 2.57
395 396 2.116827 ACTGGGTCAAAACGTGTCAA 57.883 45.000 0.00 0.00 0.00 3.18
396 397 1.740585 CAACTGGGTCAAAACGTGTCA 59.259 47.619 0.00 0.00 0.00 3.58
397 398 2.011222 TCAACTGGGTCAAAACGTGTC 58.989 47.619 0.00 0.00 0.00 3.67
398 399 1.741145 GTCAACTGGGTCAAAACGTGT 59.259 47.619 0.00 0.00 0.00 4.49
399 400 1.064952 GGTCAACTGGGTCAAAACGTG 59.935 52.381 0.00 0.00 0.00 4.49
400 401 1.340211 TGGTCAACTGGGTCAAAACGT 60.340 47.619 0.00 0.00 0.00 3.99
401 402 1.384525 TGGTCAACTGGGTCAAAACG 58.615 50.000 0.00 0.00 0.00 3.60
402 403 2.296190 GGATGGTCAACTGGGTCAAAAC 59.704 50.000 0.00 0.00 0.00 2.43
403 404 2.091610 TGGATGGTCAACTGGGTCAAAA 60.092 45.455 0.00 0.00 0.00 2.44
404 405 1.496857 TGGATGGTCAACTGGGTCAAA 59.503 47.619 0.00 0.00 0.00 2.69
405 406 1.073763 CTGGATGGTCAACTGGGTCAA 59.926 52.381 0.00 0.00 0.00 3.18
406 407 0.692476 CTGGATGGTCAACTGGGTCA 59.308 55.000 0.00 0.00 0.00 4.02
407 408 0.984230 TCTGGATGGTCAACTGGGTC 59.016 55.000 0.00 0.00 0.00 4.46
408 409 1.673767 ATCTGGATGGTCAACTGGGT 58.326 50.000 0.00 0.00 0.00 4.51
409 410 2.486191 GCTATCTGGATGGTCAACTGGG 60.486 54.545 0.00 0.00 0.00 4.45
410 411 2.171237 TGCTATCTGGATGGTCAACTGG 59.829 50.000 0.00 0.00 0.00 4.00
411 412 3.548745 TGCTATCTGGATGGTCAACTG 57.451 47.619 0.00 0.00 0.00 3.16
412 413 3.683847 GCTTGCTATCTGGATGGTCAACT 60.684 47.826 0.00 0.00 0.00 3.16
413 414 2.615912 GCTTGCTATCTGGATGGTCAAC 59.384 50.000 0.00 0.00 0.00 3.18
414 415 2.421952 GGCTTGCTATCTGGATGGTCAA 60.422 50.000 0.00 0.15 0.00 3.18
415 416 1.141657 GGCTTGCTATCTGGATGGTCA 59.858 52.381 0.00 0.00 0.00 4.02
416 417 1.141657 TGGCTTGCTATCTGGATGGTC 59.858 52.381 0.00 0.00 0.00 4.02
417 418 1.133976 GTGGCTTGCTATCTGGATGGT 60.134 52.381 0.00 0.00 0.00 3.55
418 419 1.602311 GTGGCTTGCTATCTGGATGG 58.398 55.000 0.00 0.00 0.00 3.51
419 420 1.224075 CGTGGCTTGCTATCTGGATG 58.776 55.000 0.00 0.00 0.00 3.51
420 421 0.833287 ACGTGGCTTGCTATCTGGAT 59.167 50.000 0.00 0.00 0.00 3.41
421 422 0.175760 GACGTGGCTTGCTATCTGGA 59.824 55.000 0.00 0.00 0.00 3.86
422 423 0.108186 TGACGTGGCTTGCTATCTGG 60.108 55.000 0.00 0.00 0.00 3.86
423 424 1.284657 CTGACGTGGCTTGCTATCTG 58.715 55.000 0.00 0.00 0.00 2.90
424 425 0.460987 GCTGACGTGGCTTGCTATCT 60.461 55.000 0.00 0.00 0.00 1.98
425 426 0.740868 TGCTGACGTGGCTTGCTATC 60.741 55.000 0.00 0.00 0.00 2.08
426 427 0.321564 TTGCTGACGTGGCTTGCTAT 60.322 50.000 0.00 0.00 0.00 2.97
427 428 0.533978 TTTGCTGACGTGGCTTGCTA 60.534 50.000 0.00 0.00 0.00 3.49
428 429 1.383456 TTTTGCTGACGTGGCTTGCT 61.383 50.000 0.00 0.00 0.00 3.91
429 430 0.527385 TTTTTGCTGACGTGGCTTGC 60.527 50.000 0.00 0.00 0.00 4.01
430 431 3.639162 TTTTTGCTGACGTGGCTTG 57.361 47.368 0.00 0.00 0.00 4.01
532 533 9.630098 CATGTGCTTAGTATTGTTTTCTTGATT 57.370 29.630 0.00 0.00 0.00 2.57
533 534 8.246180 CCATGTGCTTAGTATTGTTTTCTTGAT 58.754 33.333 0.00 0.00 0.00 2.57
534 535 7.446931 TCCATGTGCTTAGTATTGTTTTCTTGA 59.553 33.333 0.00 0.00 0.00 3.02
535 536 7.592938 TCCATGTGCTTAGTATTGTTTTCTTG 58.407 34.615 0.00 0.00 0.00 3.02
536 537 7.759489 TCCATGTGCTTAGTATTGTTTTCTT 57.241 32.000 0.00 0.00 0.00 2.52
537 538 7.759489 TTCCATGTGCTTAGTATTGTTTTCT 57.241 32.000 0.00 0.00 0.00 2.52
538 539 8.810652 TTTTCCATGTGCTTAGTATTGTTTTC 57.189 30.769 0.00 0.00 0.00 2.29
539 540 8.421002 ACTTTTCCATGTGCTTAGTATTGTTTT 58.579 29.630 0.00 0.00 0.00 2.43
540 541 7.951591 ACTTTTCCATGTGCTTAGTATTGTTT 58.048 30.769 0.00 0.00 0.00 2.83
541 542 7.524717 ACTTTTCCATGTGCTTAGTATTGTT 57.475 32.000 0.00 0.00 0.00 2.83
542 543 7.524717 AACTTTTCCATGTGCTTAGTATTGT 57.475 32.000 0.00 0.00 0.00 2.71
543 544 8.816640 AAAACTTTTCCATGTGCTTAGTATTG 57.183 30.769 0.00 0.00 0.00 1.90
547 548 8.088365 GGATTAAAACTTTTCCATGTGCTTAGT 58.912 33.333 0.00 0.00 0.00 2.24
548 549 8.306761 AGGATTAAAACTTTTCCATGTGCTTAG 58.693 33.333 0.00 0.00 0.00 2.18
549 550 8.189119 AGGATTAAAACTTTTCCATGTGCTTA 57.811 30.769 0.00 0.00 0.00 3.09
550 551 7.066307 AGGATTAAAACTTTTCCATGTGCTT 57.934 32.000 0.00 0.00 0.00 3.91
551 552 6.267471 TGAGGATTAAAACTTTTCCATGTGCT 59.733 34.615 0.00 0.00 0.00 4.40
552 553 6.366061 GTGAGGATTAAAACTTTTCCATGTGC 59.634 38.462 0.00 0.00 0.00 4.57
553 554 6.582295 CGTGAGGATTAAAACTTTTCCATGTG 59.418 38.462 0.00 0.00 0.00 3.21
554 555 6.264518 ACGTGAGGATTAAAACTTTTCCATGT 59.735 34.615 0.00 0.00 0.00 3.21
555 556 6.582295 CACGTGAGGATTAAAACTTTTCCATG 59.418 38.462 10.90 0.00 0.00 3.66
556 557 6.264518 ACACGTGAGGATTAAAACTTTTCCAT 59.735 34.615 25.01 0.00 0.00 3.41
557 558 5.591067 ACACGTGAGGATTAAAACTTTTCCA 59.409 36.000 25.01 0.00 0.00 3.53
558 559 5.912955 CACACGTGAGGATTAAAACTTTTCC 59.087 40.000 25.01 0.00 0.00 3.13
559 560 6.492254 ACACACGTGAGGATTAAAACTTTTC 58.508 36.000 25.01 0.00 0.00 2.29
560 561 6.445357 ACACACGTGAGGATTAAAACTTTT 57.555 33.333 25.01 0.00 0.00 2.27
561 562 6.017687 GGTACACACGTGAGGATTAAAACTTT 60.018 38.462 25.01 0.00 0.00 2.66
562 563 5.467735 GGTACACACGTGAGGATTAAAACTT 59.532 40.000 25.01 0.00 0.00 2.66
563 564 4.992951 GGTACACACGTGAGGATTAAAACT 59.007 41.667 25.01 0.00 0.00 2.66
564 565 4.152938 GGGTACACACGTGAGGATTAAAAC 59.847 45.833 25.01 6.54 0.00 2.43
565 566 4.202336 TGGGTACACACGTGAGGATTAAAA 60.202 41.667 25.01 0.00 0.00 1.52
566 567 3.324268 TGGGTACACACGTGAGGATTAAA 59.676 43.478 25.01 0.00 0.00 1.52
567 568 2.898612 TGGGTACACACGTGAGGATTAA 59.101 45.455 25.01 0.00 0.00 1.40
568 569 2.527497 TGGGTACACACGTGAGGATTA 58.473 47.619 25.01 0.00 0.00 1.75
569 570 1.344065 TGGGTACACACGTGAGGATT 58.656 50.000 25.01 0.66 0.00 3.01
570 571 1.344065 TTGGGTACACACGTGAGGAT 58.656 50.000 25.01 6.70 0.00 3.24
571 572 1.121378 TTTGGGTACACACGTGAGGA 58.879 50.000 25.01 8.58 0.00 3.71
572 573 1.600485 GTTTTGGGTACACACGTGAGG 59.400 52.381 25.01 16.14 0.00 3.86
573 574 2.281517 TGTTTTGGGTACACACGTGAG 58.718 47.619 25.01 18.00 0.00 3.51
574 575 2.398252 TGTTTTGGGTACACACGTGA 57.602 45.000 25.01 0.00 0.00 4.35
575 576 2.614520 TGATGTTTTGGGTACACACGTG 59.385 45.455 15.48 15.48 0.00 4.49
576 577 2.920524 TGATGTTTTGGGTACACACGT 58.079 42.857 0.00 0.00 0.00 4.49
577 578 3.972950 TTGATGTTTTGGGTACACACG 57.027 42.857 0.00 0.00 0.00 4.49
578 579 5.446143 TGATTGATGTTTTGGGTACACAC 57.554 39.130 0.00 0.00 0.00 3.82
579 580 5.184864 GGATGATTGATGTTTTGGGTACACA 59.815 40.000 0.00 0.00 0.00 3.72
580 581 5.418840 AGGATGATTGATGTTTTGGGTACAC 59.581 40.000 0.00 0.00 0.00 2.90
581 582 5.418524 CAGGATGATTGATGTTTTGGGTACA 59.581 40.000 0.00 0.00 39.69 2.90
582 583 5.652014 TCAGGATGATTGATGTTTTGGGTAC 59.348 40.000 0.00 0.00 42.56 3.34
583 584 5.825532 TCAGGATGATTGATGTTTTGGGTA 58.174 37.500 0.00 0.00 42.56 3.69
584 585 4.676109 TCAGGATGATTGATGTTTTGGGT 58.324 39.130 0.00 0.00 42.56 4.51
599 600 4.572985 TGAGCTTTGTTTTGTCAGGATG 57.427 40.909 0.00 0.00 37.54 3.51
600 601 5.796424 ATTGAGCTTTGTTTTGTCAGGAT 57.204 34.783 0.00 0.00 0.00 3.24
661 662 3.780294 TGGCTTTCTTCTAGGCTAATCCA 59.220 43.478 0.00 0.00 38.84 3.41
772 773 6.183361 ACCTGTCAGGCCATCATATTTCTATT 60.183 38.462 19.40 0.00 39.63 1.73
781 782 0.034767 CACACCTGTCAGGCCATCAT 60.035 55.000 19.40 0.00 39.63 2.45
823 833 8.836413 GCAATATTTACTAGATGTGCTTTACCA 58.164 33.333 0.00 0.00 0.00 3.25
824 834 8.836413 TGCAATATTTACTAGATGTGCTTTACC 58.164 33.333 0.00 0.00 0.00 2.85
825 835 9.651718 GTGCAATATTTACTAGATGTGCTTTAC 57.348 33.333 0.00 0.00 0.00 2.01
826 836 9.389755 TGTGCAATATTTACTAGATGTGCTTTA 57.610 29.630 0.00 0.00 0.00 1.85
827 837 8.279970 TGTGCAATATTTACTAGATGTGCTTT 57.720 30.769 0.00 0.00 0.00 3.51
828 838 7.864108 TGTGCAATATTTACTAGATGTGCTT 57.136 32.000 0.00 0.00 0.00 3.91
829 839 7.935755 AGATGTGCAATATTTACTAGATGTGCT 59.064 33.333 0.00 0.00 0.00 4.40
830 840 8.092521 AGATGTGCAATATTTACTAGATGTGC 57.907 34.615 0.00 0.00 0.00 4.57
835 845 9.982651 GGACTTAGATGTGCAATATTTACTAGA 57.017 33.333 0.00 0.00 0.00 2.43
836 846 9.988815 AGGACTTAGATGTGCAATATTTACTAG 57.011 33.333 0.00 0.00 0.00 2.57
838 848 9.765795 GTAGGACTTAGATGTGCAATATTTACT 57.234 33.333 0.00 0.00 0.00 2.24
839 849 9.542462 TGTAGGACTTAGATGTGCAATATTTAC 57.458 33.333 0.00 0.00 0.00 2.01
845 855 9.632638 AAATTATGTAGGACTTAGATGTGCAAT 57.367 29.630 0.00 0.00 0.00 3.56
854 864 9.141400 GCCGAAGATAAATTATGTAGGACTTAG 57.859 37.037 8.15 0.00 0.00 2.18
855 865 7.811236 CGCCGAAGATAAATTATGTAGGACTTA 59.189 37.037 8.15 0.00 0.00 2.24
856 866 6.645415 CGCCGAAGATAAATTATGTAGGACTT 59.355 38.462 8.15 0.00 0.00 3.01
857 867 6.015688 TCGCCGAAGATAAATTATGTAGGACT 60.016 38.462 8.15 0.00 0.00 3.85
858 868 6.154445 TCGCCGAAGATAAATTATGTAGGAC 58.846 40.000 8.15 1.53 0.00 3.85
859 869 6.335471 TCGCCGAAGATAAATTATGTAGGA 57.665 37.500 8.15 0.00 0.00 2.94
860 870 6.455646 GCATCGCCGAAGATAAATTATGTAGG 60.456 42.308 0.00 0.00 0.00 3.18
861 871 6.090763 TGCATCGCCGAAGATAAATTATGTAG 59.909 38.462 0.00 0.00 0.00 2.74
862 872 5.929415 TGCATCGCCGAAGATAAATTATGTA 59.071 36.000 0.00 0.00 0.00 2.29
863 873 4.754618 TGCATCGCCGAAGATAAATTATGT 59.245 37.500 0.00 0.00 0.00 2.29
864 874 5.281693 TGCATCGCCGAAGATAAATTATG 57.718 39.130 0.00 0.00 0.00 1.90
865 875 6.072508 ACAATGCATCGCCGAAGATAAATTAT 60.073 34.615 0.00 0.00 0.00 1.28
866 876 5.238432 ACAATGCATCGCCGAAGATAAATTA 59.762 36.000 0.00 0.00 0.00 1.40
867 877 4.036734 ACAATGCATCGCCGAAGATAAATT 59.963 37.500 0.00 0.00 0.00 1.82
868 878 3.565482 ACAATGCATCGCCGAAGATAAAT 59.435 39.130 0.00 0.00 0.00 1.40
869 879 2.942376 ACAATGCATCGCCGAAGATAAA 59.058 40.909 0.00 0.00 0.00 1.40
870 880 2.543848 GACAATGCATCGCCGAAGATAA 59.456 45.455 0.00 0.00 0.00 1.75
871 881 2.135139 GACAATGCATCGCCGAAGATA 58.865 47.619 0.00 0.00 0.00 1.98
872 882 0.940126 GACAATGCATCGCCGAAGAT 59.060 50.000 0.00 0.00 0.00 2.40
873 883 1.089481 GGACAATGCATCGCCGAAGA 61.089 55.000 0.00 0.00 0.00 2.87
874 884 1.091771 AGGACAATGCATCGCCGAAG 61.092 55.000 0.00 0.00 0.00 3.79
875 885 1.078497 AGGACAATGCATCGCCGAA 60.078 52.632 0.00 0.00 0.00 4.30
876 886 1.815003 CAGGACAATGCATCGCCGA 60.815 57.895 0.00 0.00 0.00 5.54
877 887 2.711311 CAGGACAATGCATCGCCG 59.289 61.111 0.00 0.00 0.00 6.46
902 922 1.421410 GCTACCGGACAAGACATGCG 61.421 60.000 9.46 0.00 0.00 4.73
945 965 1.199097 GTGCGAGTGGTGGGTTTTATG 59.801 52.381 0.00 0.00 0.00 1.90
981 1020 2.118228 TTGTTGAATTGTGTGCGAGC 57.882 45.000 0.00 0.00 0.00 5.03
985 1029 2.758009 AGCCATTGTTGAATTGTGTGC 58.242 42.857 0.00 0.00 0.00 4.57
1082 1128 1.476110 CGTTCTTGGGTTTCTGGGTGA 60.476 52.381 0.00 0.00 0.00 4.02
1083 1129 0.951558 CGTTCTTGGGTTTCTGGGTG 59.048 55.000 0.00 0.00 0.00 4.61
1084 1130 0.822121 GCGTTCTTGGGTTTCTGGGT 60.822 55.000 0.00 0.00 0.00 4.51
1085 1131 1.524008 GGCGTTCTTGGGTTTCTGGG 61.524 60.000 0.00 0.00 0.00 4.45
1107 1153 4.704833 TGCTTGTGCTCCTCGGCC 62.705 66.667 0.00 0.00 40.48 6.13
1144 1196 0.167689 GTGAGGACGACGTAGGTGTC 59.832 60.000 0.00 1.55 35.49 3.67
1153 1205 1.301479 GGTGGTTGGTGAGGACGAC 60.301 63.158 0.00 0.00 0.00 4.34
1224 1276 1.070786 GTGGTTGGAGTTCTCGCCA 59.929 57.895 0.00 0.00 41.53 5.69
1228 1280 1.726853 CGGATGTGGTTGGAGTTCTC 58.273 55.000 0.00 0.00 0.00 2.87
1241 1293 2.577059 CGTAGGTGTGGCGGATGT 59.423 61.111 0.00 0.00 0.00 3.06
1337 2727 0.677288 CACCCTGTCCTTGTACACGA 59.323 55.000 0.00 0.00 0.00 4.35
1479 2869 4.687215 TTGAAGCTGGCGCGCTCT 62.687 61.111 32.29 21.63 39.86 4.09
1606 2996 1.440938 CCCTCTAGCTCGACCGTGAG 61.441 65.000 0.00 0.00 39.05 3.51
1607 2997 1.451567 CCCTCTAGCTCGACCGTGA 60.452 63.158 0.00 0.00 0.00 4.35
1608 2998 3.111939 CCCTCTAGCTCGACCGTG 58.888 66.667 0.00 0.00 0.00 4.94
1609 2999 2.829458 GCCCTCTAGCTCGACCGT 60.829 66.667 0.00 0.00 0.00 4.83
1610 3000 3.955101 CGCCCTCTAGCTCGACCG 61.955 72.222 0.00 0.00 0.00 4.79
1611 3001 3.597728 CCGCCCTCTAGCTCGACC 61.598 72.222 0.00 0.00 0.00 4.79
1612 3002 2.829458 ACCGCCCTCTAGCTCGAC 60.829 66.667 0.00 0.00 0.00 4.20
1613 3003 2.829003 CACCGCCCTCTAGCTCGA 60.829 66.667 0.00 0.00 0.00 4.04
1614 3004 3.905678 CCACCGCCCTCTAGCTCG 61.906 72.222 0.00 0.00 0.00 5.03
1615 3005 4.228567 GCCACCGCCCTCTAGCTC 62.229 72.222 0.00 0.00 0.00 4.09
1625 3015 4.832608 CGGTTAGGAGGCCACCGC 62.833 72.222 17.55 10.19 46.45 5.68
1627 3017 1.446366 GATCGGTTAGGAGGCCACC 59.554 63.158 11.96 11.96 0.00 4.61
1628 3018 1.446366 GGATCGGTTAGGAGGCCAC 59.554 63.158 5.01 0.00 0.00 5.01
1629 3019 2.131709 CGGATCGGTTAGGAGGCCA 61.132 63.158 5.01 0.00 0.00 5.36
1630 3020 1.807495 CTCGGATCGGTTAGGAGGCC 61.807 65.000 0.00 0.00 0.00 5.19
1631 3021 1.660917 CTCGGATCGGTTAGGAGGC 59.339 63.158 0.00 0.00 0.00 4.70
1632 3022 1.660917 GCTCGGATCGGTTAGGAGG 59.339 63.158 0.00 0.00 0.00 4.30
1633 3023 1.660917 GGCTCGGATCGGTTAGGAG 59.339 63.158 0.00 0.00 0.00 3.69
1634 3024 1.831286 GGGCTCGGATCGGTTAGGA 60.831 63.158 0.00 0.00 0.00 2.94
1635 3025 2.735237 GGGCTCGGATCGGTTAGG 59.265 66.667 0.00 0.00 0.00 2.69
1636 3026 2.131294 CTCGGGCTCGGATCGGTTAG 62.131 65.000 5.94 0.00 36.95 2.34
1637 3027 2.124193 TCGGGCTCGGATCGGTTA 60.124 61.111 5.94 0.00 36.95 2.85
1638 3028 3.528370 CTCGGGCTCGGATCGGTT 61.528 66.667 5.94 0.00 36.95 4.44
1798 6454 0.679002 TCTGAGGCAAAGCATCCTGC 60.679 55.000 0.98 0.00 45.46 4.85
1881 6546 3.670637 GAAGGGTTCCGCGGGGTAC 62.671 68.421 27.83 20.06 33.15 3.34
1935 6600 3.743091 GAAGACGCCTCTCCGCTCG 62.743 68.421 0.00 0.00 0.00 5.03
2110 7575 2.168666 GACTGGGAGAACGGGGTGTC 62.169 65.000 0.00 0.00 0.00 3.67
2114 7579 3.400054 GGGACTGGGAGAACGGGG 61.400 72.222 0.00 0.00 0.00 5.73
2225 7696 4.168291 CCGAAGCTCCTGCCTCCC 62.168 72.222 0.00 0.00 40.80 4.30
2541 11058 3.195698 GCGGCGAGGATGTTCACC 61.196 66.667 12.98 0.00 0.00 4.02
2583 11100 2.509336 GGGTCCATGTCGCTGTCG 60.509 66.667 0.00 0.00 0.00 4.35
2736 11253 4.388499 TTCTTGTCGAGCGGGCCC 62.388 66.667 13.57 13.57 0.00 5.80
3220 17261 3.308705 GAACTCCCACGTCCCGGT 61.309 66.667 0.00 0.00 0.00 5.28
3225 17266 3.998672 TGGCCGAACTCCCACGTC 61.999 66.667 0.00 0.00 0.00 4.34
3294 17335 1.142748 GAGGCATCAGTCGTCCCAG 59.857 63.158 0.00 0.00 0.00 4.45
3312 17366 3.708890 CAGCATTACTCTCTCAGAGCTG 58.291 50.000 0.00 0.00 46.12 4.24
3314 17368 2.101249 AGCAGCATTACTCTCTCAGAGC 59.899 50.000 0.00 0.00 46.12 4.09
3331 17385 2.554142 TCAACTCACAAGTCACAGCAG 58.446 47.619 0.00 0.00 33.48 4.24
3334 17388 2.733552 CGGATCAACTCACAAGTCACAG 59.266 50.000 0.00 0.00 33.48 3.66
3335 17389 2.754472 CGGATCAACTCACAAGTCACA 58.246 47.619 0.00 0.00 33.48 3.58
3336 17390 1.461127 GCGGATCAACTCACAAGTCAC 59.539 52.381 0.00 0.00 33.48 3.67
3338 17392 1.079503 GGCGGATCAACTCACAAGTC 58.920 55.000 0.00 0.00 33.48 3.01
3339 17393 0.396435 TGGCGGATCAACTCACAAGT 59.604 50.000 0.00 0.00 37.32 3.16
3340 17394 1.399440 CATGGCGGATCAACTCACAAG 59.601 52.381 0.00 0.00 0.00 3.16
3342 17396 0.612744 TCATGGCGGATCAACTCACA 59.387 50.000 0.00 0.00 0.00 3.58
3343 17397 1.667724 CTTCATGGCGGATCAACTCAC 59.332 52.381 0.00 0.00 0.00 3.51
3344 17398 1.554617 TCTTCATGGCGGATCAACTCA 59.445 47.619 0.00 0.00 0.00 3.41
3356 17410 5.646793 TGCTGATTCTTCTTCTTCTTCATGG 59.353 40.000 0.00 0.00 0.00 3.66
3415 17485 3.217599 TCGACAGGAGAAGAAACATCG 57.782 47.619 0.00 0.00 0.00 3.84
3416 17486 5.672321 GCAATTCGACAGGAGAAGAAACATC 60.672 44.000 0.00 0.00 0.00 3.06
3417 17487 4.154918 GCAATTCGACAGGAGAAGAAACAT 59.845 41.667 0.00 0.00 0.00 2.71
3434 17504 6.032094 CAGACACAATTACCAGATGCAATTC 58.968 40.000 0.00 0.00 0.00 2.17
3444 17514 4.000325 CGATGGTTCAGACACAATTACCA 59.000 43.478 0.00 0.00 39.72 3.25
3445 17515 4.000988 ACGATGGTTCAGACACAATTACC 58.999 43.478 0.00 0.00 0.00 2.85
3446 17516 4.201589 CGACGATGGTTCAGACACAATTAC 60.202 45.833 0.00 0.00 0.00 1.89
3459 17529 2.557317 ACAAGTTTGACGACGATGGTT 58.443 42.857 0.00 0.00 0.00 3.67
3466 17536 4.545823 TGATTCCAACAAGTTTGACGAC 57.454 40.909 0.00 0.00 0.00 4.34
3481 17551 4.816385 TCTACGGATTGAAGCAATGATTCC 59.184 41.667 8.86 0.00 33.90 3.01
3502 17572 6.675987 CAAAAGTGAAGTACTACGTAGGTCT 58.324 40.000 25.63 18.89 39.18 3.85
3508 17578 4.690122 ACTGCAAAAGTGAAGTACTACGT 58.310 39.130 0.00 0.00 42.38 3.57
3522 17592 2.575694 AACATGAACGCACTGCAAAA 57.424 40.000 0.00 0.00 0.00 2.44
3529 17599 3.432252 ACTGTAAGCTAACATGAACGCAC 59.568 43.478 0.00 0.00 37.60 5.34
3560 17630 3.058639 GCTGTCAGTGTTGTGGAAGATTC 60.059 47.826 0.93 0.00 0.00 2.52
3564 17634 1.600957 CAGCTGTCAGTGTTGTGGAAG 59.399 52.381 5.25 0.00 0.00 3.46
3577 17647 2.027192 TCATTTACCCAGTCCAGCTGTC 60.027 50.000 13.81 5.49 43.55 3.51
3578 17648 1.985159 TCATTTACCCAGTCCAGCTGT 59.015 47.619 13.81 0.00 43.55 4.40
3583 17653 3.448093 TGCATTCATTTACCCAGTCCA 57.552 42.857 0.00 0.00 0.00 4.02
3584 17654 4.402155 TGAATGCATTCATTTACCCAGTCC 59.598 41.667 33.08 7.89 42.60 3.85
3591 17661 7.542025 AGTTCCTTCTGAATGCATTCATTTAC 58.458 34.615 35.61 25.74 44.92 2.01
3608 17678 1.270826 GCAGCTTTCCCAAGTTCCTTC 59.729 52.381 0.00 0.00 31.86 3.46
3621 17691 3.266510 TCGGAACTCATATGCAGCTTT 57.733 42.857 0.00 0.00 0.00 3.51
3622 17692 2.988010 TCGGAACTCATATGCAGCTT 57.012 45.000 0.00 0.00 0.00 3.74
3648 17718 5.295540 GGAGATGCTCTAAGAATGTTGGAAC 59.704 44.000 0.00 0.00 0.00 3.62
3670 17740 0.035317 AACTTGATGCGTCAGCTGGA 59.965 50.000 15.13 0.00 45.42 3.86
3672 17742 2.693797 AAAACTTGATGCGTCAGCTG 57.306 45.000 7.63 7.63 45.42 4.24
3673 17743 2.287788 CCAAAAACTTGATGCGTCAGCT 60.288 45.455 8.93 0.00 45.42 4.24
3674 17744 2.053627 CCAAAAACTTGATGCGTCAGC 58.946 47.619 8.93 0.00 45.41 4.26
3675 17745 2.053627 GCCAAAAACTTGATGCGTCAG 58.946 47.619 8.93 6.30 35.39 3.51
3676 17746 1.269517 GGCCAAAAACTTGATGCGTCA 60.270 47.619 3.97 3.97 0.00 4.35
3677 17747 1.269517 TGGCCAAAAACTTGATGCGTC 60.270 47.619 0.61 0.00 0.00 5.19
3678 17748 0.749649 TGGCCAAAAACTTGATGCGT 59.250 45.000 0.61 0.00 0.00 5.24
3679 17749 1.269726 ACTGGCCAAAAACTTGATGCG 60.270 47.619 7.01 0.00 0.00 4.73
3680 17750 2.137523 CACTGGCCAAAAACTTGATGC 58.862 47.619 7.01 0.00 0.00 3.91
3681 17751 3.731652 TCACTGGCCAAAAACTTGATG 57.268 42.857 7.01 0.00 0.00 3.07
3682 17752 3.007182 CCATCACTGGCCAAAAACTTGAT 59.993 43.478 7.01 5.41 35.23 2.57
3683 17753 2.364970 CCATCACTGGCCAAAAACTTGA 59.635 45.455 7.01 3.07 35.23 3.02
3684 17754 2.548493 CCCATCACTGGCCAAAAACTTG 60.548 50.000 7.01 0.00 41.64 3.16
3685 17755 1.693606 CCCATCACTGGCCAAAAACTT 59.306 47.619 7.01 0.00 41.64 2.66
3686 17756 1.341080 CCCATCACTGGCCAAAAACT 58.659 50.000 7.01 0.00 41.64 2.66
3687 17757 0.320683 GCCCATCACTGGCCAAAAAC 60.321 55.000 7.01 0.00 43.33 2.43
3688 17758 1.814772 CGCCCATCACTGGCCAAAAA 61.815 55.000 7.01 0.00 46.48 1.94
3689 17759 2.274645 CGCCCATCACTGGCCAAAA 61.275 57.895 7.01 0.00 46.48 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.