Multiple sequence alignment - TraesCS5A01G187200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G187200 chr5A 100.000 4488 0 0 1 4488 389065369 389060882 0.000000e+00 8288.0
1 TraesCS5A01G187200 chr5A 98.425 127 2 0 2621 2747 655993940 655994066 1.620000e-54 224.0
2 TraesCS5A01G187200 chr5A 98.425 127 2 0 2621 2747 696840437 696840563 1.620000e-54 224.0
3 TraesCS5A01G187200 chr5A 98.425 127 2 0 2621 2747 696879526 696879652 1.620000e-54 224.0
4 TraesCS5A01G187200 chr5A 82.418 91 11 4 622 708 407211096 407211007 1.730000e-09 75.0
5 TraesCS5A01G187200 chr5A 82.759 87 12 3 619 703 481519667 481519752 1.730000e-09 75.0
6 TraesCS5A01G187200 chr5A 82.418 91 11 4 622 708 703521473 703521384 1.730000e-09 75.0
7 TraesCS5A01G187200 chr5A 82.418 91 11 4 622 708 703570709 703570620 1.730000e-09 75.0
8 TraesCS5A01G187200 chr5D 92.853 1931 73 27 718 2622 309044497 309046388 0.000000e+00 2741.0
9 TraesCS5A01G187200 chr5D 91.694 602 23 12 3152 3732 309047469 309048064 0.000000e+00 809.0
10 TraesCS5A01G187200 chr5D 92.471 518 20 11 2746 3256 309046387 309046892 0.000000e+00 723.0
11 TraesCS5A01G187200 chr5D 86.719 384 18 3 4096 4475 309048201 309048555 3.250000e-106 396.0
12 TraesCS5A01G187200 chr5D 89.754 244 22 2 2918 3158 309047143 309047386 4.360000e-80 309.0
13 TraesCS5A01G187200 chr5D 92.737 179 9 3 2746 2924 309046896 309047070 5.760000e-64 255.0
14 TraesCS5A01G187200 chr5D 87.719 228 15 6 1 217 309040111 309040336 2.070000e-63 254.0
15 TraesCS5A01G187200 chr5D 82.671 277 31 12 399 670 309010250 309010514 3.490000e-56 230.0
16 TraesCS5A01G187200 chr5D 80.120 166 24 6 3931 4087 495220924 495221089 1.020000e-21 115.0
17 TraesCS5A01G187200 chr5D 96.970 33 1 0 4456 4488 309049712 309049744 6.270000e-04 56.5
18 TraesCS5A01G187200 chr5B 92.959 1051 47 13 1589 2622 354290161 354291201 0.000000e+00 1506.0
19 TraesCS5A01G187200 chr5B 93.100 1000 47 11 2749 3732 354291202 354292195 0.000000e+00 1445.0
20 TraesCS5A01G187200 chr5B 89.636 878 45 15 718 1575 354289129 354289980 0.000000e+00 1075.0
21 TraesCS5A01G187200 chr5B 90.955 398 23 5 325 721 354288699 354289084 1.430000e-144 523.0
22 TraesCS5A01G187200 chr5B 89.542 306 17 5 1 294 354286944 354287246 1.520000e-99 374.0
23 TraesCS5A01G187200 chr5B 91.031 223 13 2 4216 4436 354292418 354292635 1.220000e-75 294.0
24 TraesCS5A01G187200 chr5B 97.638 127 3 0 2621 2747 42698138 42698012 7.560000e-53 219.0
25 TraesCS5A01G187200 chr5B 95.402 87 4 0 4096 4182 354292330 354292416 6.050000e-29 139.0
26 TraesCS5A01G187200 chr5B 95.238 63 3 0 3760 3822 354292270 354292332 2.860000e-17 100.0
27 TraesCS5A01G187200 chr5B 98.214 56 1 0 4430 4485 354292680 354292735 1.030000e-16 99.0
28 TraesCS5A01G187200 chr5B 97.222 36 1 0 298 333 354287415 354287450 1.350000e-05 62.1
29 TraesCS5A01G187200 chr5B 96.774 31 1 0 1849 1879 354290451 354290481 8.000000e-03 52.8
30 TraesCS5A01G187200 chr3B 97.674 129 3 0 2621 2749 797463872 797464000 5.840000e-54 222.0
31 TraesCS5A01G187200 chr1D 97.674 129 3 0 2619 2747 368493683 368493811 5.840000e-54 222.0
32 TraesCS5A01G187200 chr1D 80.723 166 22 7 3931 4087 60310525 60310689 2.190000e-23 121.0
33 TraesCS5A01G187200 chr1D 88.889 54 4 2 641 693 62407207 62407259 1.040000e-06 65.8
34 TraesCS5A01G187200 chr7D 94.891 137 7 0 2621 2757 3443219 3443083 9.780000e-52 215.0
35 TraesCS5A01G187200 chr7D 80.588 170 21 9 3931 4091 47480434 47480600 2.190000e-23 121.0
36 TraesCS5A01G187200 chr2B 94.286 140 8 0 2610 2749 800544899 800545038 9.780000e-52 215.0
37 TraesCS5A01G187200 chr7A 95.489 133 5 1 2618 2749 634386685 634386553 1.260000e-50 211.0
38 TraesCS5A01G187200 chr7A 82.178 101 14 3 622 720 626898321 626898223 2.880000e-12 84.2
39 TraesCS5A01G187200 chr7A 82.759 87 12 3 619 703 187555577 187555662 1.730000e-09 75.0
40 TraesCS5A01G187200 chr7B 91.597 119 6 4 3969 4086 697253280 697253165 1.290000e-35 161.0
41 TraesCS5A01G187200 chr7B 82.178 101 14 4 622 720 79097578 79097480 2.880000e-12 84.2
42 TraesCS5A01G187200 chr2D 81.098 164 22 7 3931 4086 606522771 606522609 6.100000e-24 122.0
43 TraesCS5A01G187200 chr2D 80.000 165 24 7 3931 4087 298121765 298121928 3.670000e-21 113.0
44 TraesCS5A01G187200 chr3A 80.723 166 22 8 3931 4087 94596763 94596599 2.190000e-23 121.0
45 TraesCS5A01G187200 chr4D 80.120 166 23 7 3931 4087 227305265 227305429 1.020000e-21 115.0
46 TraesCS5A01G187200 chr4D 80.488 164 21 8 3932 4086 351203183 351203022 1.020000e-21 115.0
47 TraesCS5A01G187200 chr1A 83.908 87 11 3 619 703 466562643 466562728 3.720000e-11 80.5
48 TraesCS5A01G187200 chr1A 86.765 68 6 2 643 708 450593405 450593339 6.230000e-09 73.1
49 TraesCS5A01G187200 chr6A 82.759 87 12 3 619 703 113475954 113476039 1.730000e-09 75.0
50 TraesCS5A01G187200 chr2A 82.759 87 12 3 619 703 187999220 187999305 1.730000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G187200 chr5A 389060882 389065369 4487 True 8288.000000 8288 100.000000 1 4488 1 chr5A.!!$R1 4487
1 TraesCS5A01G187200 chr5D 309044497 309049744 5247 False 755.642857 2741 91.885429 718 4488 7 chr5D.!!$F4 3770
2 TraesCS5A01G187200 chr5B 354286944 354292735 5791 False 515.445455 1506 93.643000 1 4485 11 chr5B.!!$F1 4484

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
891 2381 0.036306 CTACAACCACCCCTGACCAC 59.964 60.0 0.00 0.0 0.00 4.16 F
1652 3326 0.320073 CGTGACCCGTTGGAGCTTTA 60.320 55.0 0.00 0.0 34.81 1.85 F
1717 3391 0.454452 GACTTGAATTCGCGGGCAAC 60.454 55.0 6.13 0.0 0.00 4.17 F
2198 3872 0.618680 ATGCTGAGCCCAGTGAGGTA 60.619 55.0 0.23 0.0 42.35 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2724 4414 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.00 44.66 2.12 R
2726 4416 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.0 5.23 0.00 44.66 1.40 R
2727 4417 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.0 5.23 0.00 44.66 2.17 R
3994 6439 0.105913 ATCCACCATCATGGCATGCA 60.106 50.0 22.56 11.82 42.67 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 23 2.158827 GGGTTTGTGTTTGCCAAAGGAT 60.159 45.455 0.00 0.00 32.79 3.24
29 31 7.531857 TGTGTTTGCCAAAGGATAAGAAATA 57.468 32.000 0.00 0.00 0.00 1.40
37 39 6.096846 GCCAAAGGATAAGAAATAGCAAAGGA 59.903 38.462 0.00 0.00 0.00 3.36
64 66 3.905493 TTGGGGAATTAAGTGTTGGGA 57.095 42.857 0.00 0.00 0.00 4.37
78 80 3.829601 GTGTTGGGATGGGTTTTATGACA 59.170 43.478 0.00 0.00 0.00 3.58
81 83 2.021457 GGGATGGGTTTTATGACACCG 58.979 52.381 0.00 0.00 33.34 4.94
88 101 3.151554 GGTTTTATGACACCGTCCCTTT 58.848 45.455 0.00 0.00 0.00 3.11
99 112 2.966516 ACCGTCCCTTTTTGGCAATTAA 59.033 40.909 0.00 0.00 0.00 1.40
136 149 4.799564 TTTGGGAATGGATTAGTGTTGC 57.200 40.909 0.00 0.00 0.00 4.17
204 217 2.102084 TGGATCTCGCTCAATCTTGGAG 59.898 50.000 0.00 0.00 35.47 3.86
269 282 4.968259 AGTGTTGCCTATTAGTGTGTTGA 58.032 39.130 0.00 0.00 0.00 3.18
279 292 7.415206 GCCTATTAGTGTGTTGATCCGAATTTT 60.415 37.037 0.00 0.00 0.00 1.82
345 1780 5.533903 ACTTTCAATCATCTGCACTTTCAGT 59.466 36.000 0.00 0.00 35.63 3.41
370 1805 1.301423 TGTTTACAAGTCGCACACCC 58.699 50.000 0.00 0.00 0.00 4.61
390 1825 9.626045 CACACCCTTAAAGATGTAAATCTTTTC 57.374 33.333 22.95 0.00 45.59 2.29
428 1863 6.124088 ACGATGATGTGAATTTTAAGCCTC 57.876 37.500 0.00 0.00 0.00 4.70
477 1913 8.675040 ACAAGAAAGAAAGAAAGAAAGAAACG 57.325 30.769 0.00 0.00 0.00 3.60
507 1943 1.751563 TGGCGTGTCCACTTGATCA 59.248 52.632 0.00 0.00 40.72 2.92
513 1949 4.262036 GGCGTGTCCACTTGATCATATAGA 60.262 45.833 0.00 0.00 34.01 1.98
516 1952 6.090088 GCGTGTCCACTTGATCATATAGATTC 59.910 42.308 0.00 0.00 37.00 2.52
517 1953 7.147976 CGTGTCCACTTGATCATATAGATTCA 58.852 38.462 0.00 0.00 37.00 2.57
570 2006 5.814314 TTGACAACACAAAAGAAACAACG 57.186 34.783 0.00 0.00 0.00 4.10
572 2008 3.580731 ACAACACAAAAGAAACAACGGG 58.419 40.909 0.00 0.00 0.00 5.28
579 2015 5.912955 CACAAAAGAAACAACGGGATTCTAC 59.087 40.000 3.06 0.00 33.26 2.59
603 2039 7.864108 CCAAGAGGTTTGAAATTTTTCCTTT 57.136 32.000 0.00 0.00 36.36 3.11
620 2056 9.862149 TTTTTCCTTTAAAGTAGAGTGGAGATT 57.138 29.630 14.03 0.00 0.00 2.40
677 2113 3.485216 GCGAATCAAATGACCAACGTAGG 60.485 47.826 0.00 0.00 0.00 3.18
679 2115 4.390603 CGAATCAAATGACCAACGTAGGAA 59.609 41.667 0.00 0.00 0.00 3.36
693 2129 4.918588 ACGTAGGAAAAATGACCAAGGAT 58.081 39.130 0.00 0.00 0.00 3.24
721 2157 8.156820 CCAATCCTAAAGAAAACCCTTTGAATT 58.843 33.333 0.00 0.00 37.02 2.17
722 2158 8.992073 CAATCCTAAAGAAAACCCTTTGAATTG 58.008 33.333 0.00 0.00 37.02 2.32
723 2159 7.061566 TCCTAAAGAAAACCCTTTGAATTGG 57.938 36.000 0.00 0.00 37.02 3.16
724 2160 5.700832 CCTAAAGAAAACCCTTTGAATTGGC 59.299 40.000 0.00 0.00 37.02 4.52
725 2161 4.769345 AAGAAAACCCTTTGAATTGGCA 57.231 36.364 0.00 0.00 0.00 4.92
726 2162 4.341366 AGAAAACCCTTTGAATTGGCAG 57.659 40.909 0.00 0.00 0.00 4.85
747 2230 7.035612 GGCAGAAAACTGAAAAGAAAAGAGAA 58.964 34.615 0.00 0.00 0.00 2.87
748 2231 7.545615 GGCAGAAAACTGAAAAGAAAAGAGAAA 59.454 33.333 0.00 0.00 0.00 2.52
749 2232 8.590470 GCAGAAAACTGAAAAGAAAAGAGAAAG 58.410 33.333 0.00 0.00 0.00 2.62
750 2233 9.846248 CAGAAAACTGAAAAGAAAAGAGAAAGA 57.154 29.630 0.00 0.00 0.00 2.52
753 2236 9.809096 AAAACTGAAAAGAAAAGAGAAAGATCC 57.191 29.630 0.00 0.00 0.00 3.36
817 2307 2.128821 TGACACCACATACACGTTTCG 58.871 47.619 0.00 0.00 0.00 3.46
838 2328 2.156917 CTTTTCCCGACTAACCCCAAC 58.843 52.381 0.00 0.00 0.00 3.77
891 2381 0.036306 CTACAACCACCCCTGACCAC 59.964 60.000 0.00 0.00 0.00 4.16
909 2399 2.358737 CCAAAGAGCGGCGGAACT 60.359 61.111 9.78 0.00 0.00 3.01
976 2467 2.619590 GGAAAAGCGTATTCCCCTTCCA 60.620 50.000 6.88 0.00 40.41 3.53
1191 2695 2.101770 CCTCGTCGTAGGTTCGGC 59.898 66.667 0.00 0.00 31.46 5.54
1192 2696 2.101770 CTCGTCGTAGGTTCGGCC 59.898 66.667 0.00 0.00 37.58 6.13
1193 2697 3.729906 CTCGTCGTAGGTTCGGCCG 62.730 68.421 22.12 22.12 43.70 6.13
1194 2698 4.842091 CGTCGTAGGTTCGGCCGG 62.842 72.222 27.83 7.21 43.70 6.13
1195 2699 4.503314 GTCGTAGGTTCGGCCGGG 62.503 72.222 27.83 6.21 43.70 5.73
1197 2701 4.503314 CGTAGGTTCGGCCGGGTC 62.503 72.222 27.83 15.48 43.70 4.46
1198 2702 3.073101 GTAGGTTCGGCCGGGTCT 61.073 66.667 27.83 20.90 43.70 3.85
1199 2703 2.284112 TAGGTTCGGCCGGGTCTT 60.284 61.111 27.83 14.41 43.70 3.01
1200 2704 1.000233 TAGGTTCGGCCGGGTCTTA 60.000 57.895 27.83 13.39 43.70 2.10
1201 2705 0.397535 TAGGTTCGGCCGGGTCTTAT 60.398 55.000 27.83 7.79 43.70 1.73
1202 2706 1.523032 GGTTCGGCCGGGTCTTATG 60.523 63.158 27.83 0.00 0.00 1.90
1203 2707 1.219935 GTTCGGCCGGGTCTTATGT 59.780 57.895 27.83 0.00 0.00 2.29
1204 2708 0.392060 GTTCGGCCGGGTCTTATGTT 60.392 55.000 27.83 0.00 0.00 2.71
1205 2709 0.325602 TTCGGCCGGGTCTTATGTTT 59.674 50.000 27.83 0.00 0.00 2.83
1206 2710 0.391927 TCGGCCGGGTCTTATGTTTG 60.392 55.000 27.83 0.00 0.00 2.93
1207 2711 1.373590 CGGCCGGGTCTTATGTTTGG 61.374 60.000 20.10 0.00 0.00 3.28
1220 2724 1.362355 GTTTGGCCGGGTCACTTTG 59.638 57.895 0.00 0.00 0.00 2.77
1223 2727 2.112297 GGCCGGGTCACTTTGTGA 59.888 61.111 2.18 0.00 40.50 3.58
1231 2735 2.557317 GGTCACTTTGTGAGTTCGGAA 58.443 47.619 0.20 0.00 43.57 4.30
1251 2755 0.461339 TTACGGGCCAGATTTCGAGC 60.461 55.000 10.86 0.00 0.00 5.03
1276 2780 4.092968 CCTGTTTTACGATGTTAGGACAGC 59.907 45.833 0.00 0.00 39.58 4.40
1332 2836 3.793559 ACGAATCTATGGCTGGTGTTAC 58.206 45.455 0.00 0.00 0.00 2.50
1375 2879 2.632537 AGTGGTACTGGGGTCAAGAAT 58.367 47.619 0.00 0.00 0.00 2.40
1425 2932 4.718961 AGCTGTGAAGAGTTAAATGGTGT 58.281 39.130 0.00 0.00 0.00 4.16
1460 2967 3.341823 ACTGAATGATGACTGTCTTGCC 58.658 45.455 9.51 0.00 0.00 4.52
1512 3019 9.920133 TTCTGTAAATCATGATATCTAGTCAGC 57.080 33.333 9.04 0.00 0.00 4.26
1540 3047 2.550830 AGTAACTGTGAACTGCCCTG 57.449 50.000 0.00 0.00 0.00 4.45
1584 3251 7.148069 GGTGAAAATAGAAACTAGTTGGGATGG 60.148 40.741 9.34 0.00 0.00 3.51
1652 3326 0.320073 CGTGACCCGTTGGAGCTTTA 60.320 55.000 0.00 0.00 34.81 1.85
1710 3384 6.910433 TGTTTAAGAGTTTGACTTGAATTCGC 59.090 34.615 0.04 0.00 0.00 4.70
1717 3391 0.454452 GACTTGAATTCGCGGGCAAC 60.454 55.000 6.13 0.00 0.00 4.17
1821 3495 4.481368 TTGGTATCGGTGTAGCAGATTT 57.519 40.909 0.00 0.00 34.02 2.17
1822 3496 4.481368 TGGTATCGGTGTAGCAGATTTT 57.519 40.909 0.00 0.00 34.04 1.82
1884 3558 1.412710 TCACCGACTGATAATGGGAGC 59.587 52.381 0.00 0.00 0.00 4.70
1891 3565 4.051922 GACTGATAATGGGAGCGTTGTAG 58.948 47.826 0.00 0.00 0.00 2.74
1897 3571 4.689612 AATGGGAGCGTTGTAGATGTAT 57.310 40.909 0.00 0.00 0.00 2.29
1964 3638 3.904136 ATCAGCTGCTTTGTGTTGTAC 57.096 42.857 9.47 0.00 0.00 2.90
1965 3639 2.917933 TCAGCTGCTTTGTGTTGTACT 58.082 42.857 9.47 0.00 0.00 2.73
1966 3640 2.613595 TCAGCTGCTTTGTGTTGTACTG 59.386 45.455 9.47 0.00 0.00 2.74
1972 3646 7.277760 CAGCTGCTTTGTGTTGTACTGTATATA 59.722 37.037 0.00 0.00 0.00 0.86
2058 3732 0.951040 CACGCAGGGAGGAACTGAAC 60.951 60.000 0.00 0.00 41.55 3.18
2110 3784 3.034721 ACAGAACTTTGCGGTCGAATA 57.965 42.857 0.00 0.00 0.00 1.75
2192 3866 2.896685 GTCTAGATATGCTGAGCCCAGT 59.103 50.000 0.23 0.00 42.35 4.00
2196 3870 0.763652 ATATGCTGAGCCCAGTGAGG 59.236 55.000 0.23 0.00 42.35 3.86
2198 3872 0.618680 ATGCTGAGCCCAGTGAGGTA 60.619 55.000 0.23 0.00 42.35 3.08
2199 3873 1.260538 TGCTGAGCCCAGTGAGGTAG 61.261 60.000 0.23 0.00 42.35 3.18
2200 3874 1.261238 GCTGAGCCCAGTGAGGTAGT 61.261 60.000 0.00 0.00 42.35 2.73
2266 3955 3.185330 CATGTCCAAGAGACTCATGACG 58.815 50.000 9.25 0.00 46.46 4.35
2279 3968 5.707298 AGACTCATGACGTTGATTTTTGGAT 59.293 36.000 0.00 0.00 0.00 3.41
2372 4061 5.695816 GCAACTTGGCTTCAACATTTAATGA 59.304 36.000 12.28 0.00 0.00 2.57
2436 4125 4.081420 ACTGTTGCTAGGGTGTATCAGAAG 60.081 45.833 0.00 0.00 0.00 2.85
2563 4253 5.247110 ACTTCAGTCAATGTAGGACAGATGT 59.753 40.000 0.00 0.00 37.74 3.06
2622 4312 9.297037 AGATGTTTAAGGGGTATTATGCATTAC 57.703 33.333 3.54 1.73 0.00 1.89
2623 4313 9.297037 GATGTTTAAGGGGTATTATGCATTACT 57.703 33.333 3.54 0.00 0.00 2.24
2624 4314 8.685838 TGTTTAAGGGGTATTATGCATTACTC 57.314 34.615 3.54 1.62 0.00 2.59
2625 4315 7.722285 TGTTTAAGGGGTATTATGCATTACTCC 59.278 37.037 16.77 16.77 38.96 3.85
2626 4316 4.929146 AGGGGTATTATGCATTACTCCC 57.071 45.455 19.69 18.97 39.41 4.30
2627 4317 4.513292 AGGGGTATTATGCATTACTCCCT 58.487 43.478 19.69 20.36 39.41 4.20
2628 4318 4.536489 AGGGGTATTATGCATTACTCCCTC 59.464 45.833 19.69 12.53 39.41 4.30
2629 4319 4.324331 GGGGTATTATGCATTACTCCCTCC 60.324 50.000 14.39 4.77 33.54 4.30
2630 4320 4.504858 GGTATTATGCATTACTCCCTCCG 58.495 47.826 3.54 0.00 0.00 4.63
2631 4321 4.020485 GGTATTATGCATTACTCCCTCCGT 60.020 45.833 3.54 0.00 0.00 4.69
2632 4322 3.746045 TTATGCATTACTCCCTCCGTC 57.254 47.619 3.54 0.00 0.00 4.79
2633 4323 0.759346 ATGCATTACTCCCTCCGTCC 59.241 55.000 0.00 0.00 0.00 4.79
2634 4324 1.067582 GCATTACTCCCTCCGTCCG 59.932 63.158 0.00 0.00 0.00 4.79
2635 4325 1.389609 GCATTACTCCCTCCGTCCGA 61.390 60.000 0.00 0.00 0.00 4.55
2636 4326 1.108776 CATTACTCCCTCCGTCCGAA 58.891 55.000 0.00 0.00 0.00 4.30
2637 4327 1.479323 CATTACTCCCTCCGTCCGAAA 59.521 52.381 0.00 0.00 0.00 3.46
2638 4328 1.631405 TTACTCCCTCCGTCCGAAAA 58.369 50.000 0.00 0.00 0.00 2.29
2639 4329 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
2640 4330 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2641 4331 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2642 4332 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2643 4333 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2644 4334 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2645 4335 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2646 4336 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2647 4337 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2648 4338 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2649 4339 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2650 4340 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2651 4341 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2652 4342 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2653 4343 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2654 4344 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2655 4345 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2656 4346 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2657 4347 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2658 4348 7.273381 CCGAAAATACTTGTCATCAAAATGGAC 59.727 37.037 0.00 0.00 33.42 4.02
2659 4349 7.807433 CGAAAATACTTGTCATCAAAATGGACA 59.193 33.333 0.00 0.00 33.42 4.02
2660 4350 9.474920 GAAAATACTTGTCATCAAAATGGACAA 57.525 29.630 0.00 0.00 34.59 3.18
2661 4351 9.829507 AAAATACTTGTCATCAAAATGGACAAA 57.170 25.926 7.70 0.00 34.98 2.83
2662 4352 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
2663 4353 9.829507 AATACTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.70 0.55 34.98 1.94
2665 4355 8.145316 ACTTGTCATCAAAATGGACAAAAATG 57.855 30.769 7.70 0.11 34.98 2.32
2666 4356 7.227116 ACTTGTCATCAAAATGGACAAAAATGG 59.773 33.333 7.70 0.00 34.98 3.16
2667 4357 6.824553 TGTCATCAAAATGGACAAAAATGGA 58.175 32.000 0.00 0.00 33.42 3.41
2668 4358 7.451732 TGTCATCAAAATGGACAAAAATGGAT 58.548 30.769 0.00 0.00 33.42 3.41
2669 4359 7.388224 TGTCATCAAAATGGACAAAAATGGATG 59.612 33.333 0.00 0.00 33.42 3.51
2670 4360 7.388500 GTCATCAAAATGGACAAAAATGGATGT 59.612 33.333 0.00 0.00 33.42 3.06
2671 4361 8.591940 TCATCAAAATGGACAAAAATGGATGTA 58.408 29.630 0.00 0.00 33.42 2.29
2672 4362 9.386010 CATCAAAATGGACAAAAATGGATGTAT 57.614 29.630 0.00 0.00 0.00 2.29
2673 4363 9.603921 ATCAAAATGGACAAAAATGGATGTATC 57.396 29.630 0.00 0.00 0.00 2.24
2674 4364 8.814931 TCAAAATGGACAAAAATGGATGTATCT 58.185 29.630 0.00 0.00 0.00 1.98
2677 4367 9.699410 AAATGGACAAAAATGGATGTATCTAGA 57.301 29.630 0.00 0.00 0.00 2.43
2678 4368 9.699410 AATGGACAAAAATGGATGTATCTAGAA 57.301 29.630 0.00 0.00 0.00 2.10
2679 4369 8.506168 TGGACAAAAATGGATGTATCTAGAAC 57.494 34.615 0.00 0.00 0.00 3.01
2680 4370 8.328758 TGGACAAAAATGGATGTATCTAGAACT 58.671 33.333 0.00 0.00 0.00 3.01
2681 4371 9.832445 GGACAAAAATGGATGTATCTAGAACTA 57.168 33.333 0.00 0.00 0.00 2.24
2733 4423 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
2734 4424 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
2735 4425 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
2736 4426 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2737 4427 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2738 4428 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2739 4429 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2740 4430 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2741 4431 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2742 4432 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2743 4433 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2744 4434 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2745 4435 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
2746 4436 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2802 4493 6.328672 ACACTCCTCTTAAGCATCATATCCTT 59.671 38.462 0.00 0.00 0.00 3.36
2817 4508 8.900781 CATCATATCCTTCATTCACTTTGAAGT 58.099 33.333 11.29 0.00 45.56 3.01
2873 4564 5.923204 CTGCCTGACAGTCTTAAGGATTAT 58.077 41.667 9.22 0.00 41.86 1.28
2998 4692 4.414337 AGCAAGTCCTAATAGCTTCCAG 57.586 45.455 0.00 0.00 29.98 3.86
3006 4700 6.013293 AGTCCTAATAGCTTCCAGAACACTTT 60.013 38.462 0.00 0.00 0.00 2.66
3074 4768 4.968181 CGAAATCTTATGTGAAGCTGCATG 59.032 41.667 0.00 0.00 0.00 4.06
3122 4816 9.660180 TTATTGTTTGTATGTACATGCTGAGTA 57.340 29.630 22.21 7.94 35.89 2.59
3123 4817 8.737168 ATTGTTTGTATGTACATGCTGAGTAT 57.263 30.769 22.21 9.58 35.89 2.12
3125 4819 9.660180 TTGTTTGTATGTACATGCTGAGTATAA 57.340 29.630 22.21 6.10 35.89 0.98
3126 4820 9.093970 TGTTTGTATGTACATGCTGAGTATAAC 57.906 33.333 22.21 14.43 35.89 1.89
3129 4823 9.830975 TTGTATGTACATGCTGAGTATAACATT 57.169 29.630 22.21 0.00 35.89 2.71
3131 4825 9.476202 GTATGTACATGCTGAGTATAACATTGA 57.524 33.333 18.81 0.00 0.00 2.57
3137 4836 9.182214 ACATGCTGAGTATAACATTGATTTTCT 57.818 29.630 0.00 0.00 0.00 2.52
3220 4919 4.198530 CAAAGCAAATGGAAACTTGGGTT 58.801 39.130 0.00 0.00 37.24 4.11
3227 4926 3.905493 TGGAAACTTGGGTTGGGATAA 57.095 42.857 0.00 0.00 35.63 1.75
3247 4946 6.497606 GGATAAGACTACTAGGGGTGCTAATT 59.502 42.308 0.00 0.00 0.00 1.40
3248 4947 5.873146 AAGACTACTAGGGGTGCTAATTC 57.127 43.478 0.00 0.00 0.00 2.17
3461 5847 6.374417 ACTACTATGGTGACCAAATCAAGT 57.626 37.500 9.06 9.93 39.72 3.16
3575 5961 0.392193 CTGCTGTTCGATTGCCTCCT 60.392 55.000 0.00 0.00 0.00 3.69
3632 6028 5.353123 TGGCTAACTAGAAGTAATTTTGGCG 59.647 40.000 0.00 0.00 0.00 5.69
3658 6054 7.522889 GCAATCTCCAGGCTTAAGAATAAATCC 60.523 40.741 6.67 0.00 0.00 3.01
3663 6059 9.408648 CTCCAGGCTTAAGAATAAATCCTTTTA 57.591 33.333 6.67 0.00 0.00 1.52
3696 6092 2.807472 CGCCCCAGTTGTGTGTTACTTA 60.807 50.000 0.00 0.00 0.00 2.24
3713 6109 6.540551 TGTTACTTATTGTGTTCTGCAGTCAA 59.459 34.615 14.67 14.53 0.00 3.18
3732 6128 3.066203 TCAAGCGTTTTTCTCTTGTTCCC 59.934 43.478 0.00 0.00 39.19 3.97
3733 6129 2.932261 AGCGTTTTTCTCTTGTTCCCT 58.068 42.857 0.00 0.00 0.00 4.20
3735 6131 4.652822 AGCGTTTTTCTCTTGTTCCCTAT 58.347 39.130 0.00 0.00 0.00 2.57
3736 6132 5.070685 AGCGTTTTTCTCTTGTTCCCTATT 58.929 37.500 0.00 0.00 0.00 1.73
3738 6134 5.278315 GCGTTTTTCTCTTGTTCCCTATTGT 60.278 40.000 0.00 0.00 0.00 2.71
3739 6135 6.142817 CGTTTTTCTCTTGTTCCCTATTGTG 58.857 40.000 0.00 0.00 0.00 3.33
3740 6136 6.238648 CGTTTTTCTCTTGTTCCCTATTGTGT 60.239 38.462 0.00 0.00 0.00 3.72
3741 6137 6.633500 TTTTCTCTTGTTCCCTATTGTGTG 57.367 37.500 0.00 0.00 0.00 3.82
3743 6139 5.304686 TCTCTTGTTCCCTATTGTGTGTT 57.695 39.130 0.00 0.00 0.00 3.32
3744 6140 6.428083 TCTCTTGTTCCCTATTGTGTGTTA 57.572 37.500 0.00 0.00 0.00 2.41
3745 6141 6.228258 TCTCTTGTTCCCTATTGTGTGTTAC 58.772 40.000 0.00 0.00 0.00 2.50
3746 6142 4.992319 TCTTGTTCCCTATTGTGTGTTACG 59.008 41.667 0.00 0.00 0.00 3.18
3748 6144 4.309099 TGTTCCCTATTGTGTGTTACGTC 58.691 43.478 0.00 0.00 0.00 4.34
3751 6147 5.155278 TCCCTATTGTGTGTTACGTCAAT 57.845 39.130 0.00 0.00 32.90 2.57
3753 6149 4.331717 CCCTATTGTGTGTTACGTCAATCC 59.668 45.833 0.00 0.00 31.55 3.01
3754 6150 5.175859 CCTATTGTGTGTTACGTCAATCCT 58.824 41.667 0.00 0.00 31.55 3.24
3755 6151 5.642063 CCTATTGTGTGTTACGTCAATCCTT 59.358 40.000 0.00 0.00 31.55 3.36
3756 6152 6.148811 CCTATTGTGTGTTACGTCAATCCTTT 59.851 38.462 0.00 0.00 31.55 3.11
3757 6153 5.821516 TTGTGTGTTACGTCAATCCTTTT 57.178 34.783 0.00 0.00 0.00 2.27
3758 6154 6.922247 TTGTGTGTTACGTCAATCCTTTTA 57.078 33.333 0.00 0.00 0.00 1.52
3765 6210 6.311935 TGTTACGTCAATCCTTTTATTCCTCG 59.688 38.462 0.00 0.00 0.00 4.63
3773 6218 1.396996 CTTTTATTCCTCGTGCACCGG 59.603 52.381 12.15 12.33 37.11 5.28
3790 6235 1.308069 CGGAGCTGAACACAATGGGG 61.308 60.000 0.00 0.00 0.00 4.96
3822 6267 5.112220 TGTGTTCTTTCTGTTCATCATGC 57.888 39.130 0.00 0.00 0.00 4.06
3823 6268 4.823442 TGTGTTCTTTCTGTTCATCATGCT 59.177 37.500 0.00 0.00 0.00 3.79
3824 6269 5.152097 GTGTTCTTTCTGTTCATCATGCTG 58.848 41.667 0.00 0.00 0.00 4.41
3825 6270 5.049198 GTGTTCTTTCTGTTCATCATGCTGA 60.049 40.000 0.00 0.00 0.00 4.26
3826 6271 5.180680 TGTTCTTTCTGTTCATCATGCTGAG 59.819 40.000 0.00 0.00 0.00 3.35
3827 6272 3.688185 TCTTTCTGTTCATCATGCTGAGC 59.312 43.478 6.46 6.46 0.00 4.26
3828 6273 3.345508 TTCTGTTCATCATGCTGAGCT 57.654 42.857 13.48 0.00 0.00 4.09
3829 6274 2.629051 TCTGTTCATCATGCTGAGCTG 58.371 47.619 13.48 12.75 0.00 4.24
3830 6275 2.235402 TCTGTTCATCATGCTGAGCTGA 59.765 45.455 15.51 15.51 33.92 4.26
3831 6276 3.007635 CTGTTCATCATGCTGAGCTGAA 58.992 45.455 13.48 4.25 30.41 3.02
3832 6277 2.745821 TGTTCATCATGCTGAGCTGAAC 59.254 45.455 22.66 22.66 42.38 3.18
3833 6278 2.745821 GTTCATCATGCTGAGCTGAACA 59.254 45.455 23.80 7.74 41.98 3.18
3834 6279 2.353323 TCATCATGCTGAGCTGAACAC 58.647 47.619 5.83 0.00 0.00 3.32
3835 6280 2.027469 TCATCATGCTGAGCTGAACACT 60.027 45.455 5.83 0.00 0.00 3.55
3836 6281 1.804601 TCATGCTGAGCTGAACACTG 58.195 50.000 5.83 0.00 0.00 3.66
3837 6282 0.803117 CATGCTGAGCTGAACACTGG 59.197 55.000 5.83 0.00 0.00 4.00
3838 6283 0.399454 ATGCTGAGCTGAACACTGGT 59.601 50.000 5.83 0.00 0.00 4.00
3839 6284 0.533531 TGCTGAGCTGAACACTGGTG 60.534 55.000 5.83 0.00 0.00 4.17
3840 6285 1.849976 GCTGAGCTGAACACTGGTGC 61.850 60.000 0.00 0.00 0.00 5.01
3841 6286 0.250209 CTGAGCTGAACACTGGTGCT 60.250 55.000 0.00 0.00 36.63 4.40
3842 6287 0.181114 TGAGCTGAACACTGGTGCTT 59.819 50.000 0.00 0.00 33.83 3.91
3843 6288 0.590195 GAGCTGAACACTGGTGCTTG 59.410 55.000 0.00 0.00 33.83 4.01
3844 6289 0.107017 AGCTGAACACTGGTGCTTGT 60.107 50.000 0.17 0.00 0.00 3.16
3845 6290 0.308993 GCTGAACACTGGTGCTTGTC 59.691 55.000 0.17 0.00 0.00 3.18
3846 6291 1.667236 CTGAACACTGGTGCTTGTCA 58.333 50.000 0.17 0.02 0.00 3.58
3847 6292 1.331756 CTGAACACTGGTGCTTGTCAC 59.668 52.381 0.17 0.00 44.90 3.67
3848 6293 1.065491 TGAACACTGGTGCTTGTCACT 60.065 47.619 0.17 0.00 44.98 3.41
3849 6294 2.017049 GAACACTGGTGCTTGTCACTT 58.983 47.619 0.17 0.00 44.98 3.16
3850 6295 1.382522 ACACTGGTGCTTGTCACTTG 58.617 50.000 0.17 0.00 44.98 3.16
3851 6296 0.664761 CACTGGTGCTTGTCACTTGG 59.335 55.000 0.00 0.00 44.98 3.61
3852 6297 0.546122 ACTGGTGCTTGTCACTTGGA 59.454 50.000 0.00 0.00 44.98 3.53
3864 6309 3.512680 GTCACTTGGACTATCTGGAACG 58.487 50.000 0.00 0.00 43.46 3.95
3865 6310 3.192844 GTCACTTGGACTATCTGGAACGA 59.807 47.826 0.00 0.00 43.46 3.85
3866 6311 3.444034 TCACTTGGACTATCTGGAACGAG 59.556 47.826 0.00 0.00 0.00 4.18
3867 6312 3.444034 CACTTGGACTATCTGGAACGAGA 59.556 47.826 0.00 0.00 0.00 4.04
3868 6313 3.697045 ACTTGGACTATCTGGAACGAGAG 59.303 47.826 0.00 0.00 0.00 3.20
3869 6314 2.656002 TGGACTATCTGGAACGAGAGG 58.344 52.381 0.00 0.00 0.00 3.69
3870 6315 2.241430 TGGACTATCTGGAACGAGAGGA 59.759 50.000 0.00 0.00 0.00 3.71
3871 6316 3.288964 GGACTATCTGGAACGAGAGGAA 58.711 50.000 0.00 0.00 0.00 3.36
3872 6317 3.067040 GGACTATCTGGAACGAGAGGAAC 59.933 52.174 0.00 0.00 0.00 3.62
3887 6332 3.904136 AGGAACTCGCACATTTTTCTG 57.096 42.857 0.00 0.00 0.00 3.02
3888 6333 2.030805 AGGAACTCGCACATTTTTCTGC 60.031 45.455 0.00 0.00 0.00 4.26
3889 6334 2.287547 GGAACTCGCACATTTTTCTGCA 60.288 45.455 0.00 0.00 0.00 4.41
3890 6335 3.371168 GAACTCGCACATTTTTCTGCAA 58.629 40.909 0.00 0.00 0.00 4.08
3891 6336 3.435105 ACTCGCACATTTTTCTGCAAA 57.565 38.095 0.00 0.00 0.00 3.68
3892 6337 3.779759 ACTCGCACATTTTTCTGCAAAA 58.220 36.364 0.00 0.00 38.76 2.44
3893 6338 4.180057 ACTCGCACATTTTTCTGCAAAAA 58.820 34.783 0.00 0.00 43.92 1.94
3907 6352 2.719354 AAAAAGTGCACCGACGCC 59.281 55.556 14.63 0.00 0.00 5.68
3908 6353 2.115911 AAAAAGTGCACCGACGCCA 61.116 52.632 14.63 0.00 0.00 5.69
3909 6354 1.658686 AAAAAGTGCACCGACGCCAA 61.659 50.000 14.63 0.00 0.00 4.52
3910 6355 1.452145 AAAAGTGCACCGACGCCAAT 61.452 50.000 14.63 0.00 0.00 3.16
3911 6356 1.452145 AAAGTGCACCGACGCCAATT 61.452 50.000 14.63 0.00 0.00 2.32
3912 6357 1.452145 AAGTGCACCGACGCCAATTT 61.452 50.000 14.63 0.00 0.00 1.82
3913 6358 1.007849 GTGCACCGACGCCAATTTT 60.008 52.632 5.22 0.00 0.00 1.82
3914 6359 0.238817 GTGCACCGACGCCAATTTTA 59.761 50.000 5.22 0.00 0.00 1.52
3915 6360 1.135517 GTGCACCGACGCCAATTTTAT 60.136 47.619 5.22 0.00 0.00 1.40
3916 6361 1.542030 TGCACCGACGCCAATTTTATT 59.458 42.857 0.00 0.00 0.00 1.40
3917 6362 1.917303 GCACCGACGCCAATTTTATTG 59.083 47.619 0.00 0.00 0.00 1.90
3918 6363 1.917303 CACCGACGCCAATTTTATTGC 59.083 47.619 0.00 0.00 0.00 3.56
3924 6369 3.816613 CGCCAATTTTATTGCGCTTAC 57.183 42.857 9.73 0.00 40.58 2.34
3925 6370 3.434637 CGCCAATTTTATTGCGCTTACT 58.565 40.909 9.73 0.00 40.58 2.24
3926 6371 3.482110 CGCCAATTTTATTGCGCTTACTC 59.518 43.478 9.73 0.00 40.58 2.59
3927 6372 3.482110 GCCAATTTTATTGCGCTTACTCG 59.518 43.478 9.73 0.00 0.00 4.18
3928 6373 4.035017 CCAATTTTATTGCGCTTACTCGG 58.965 43.478 9.73 0.00 0.00 4.63
3929 6374 2.817538 TTTTATTGCGCTTACTCGGC 57.182 45.000 9.73 0.00 0.00 5.54
3936 6381 2.413765 GCTTACTCGGCGAGGAGG 59.586 66.667 36.81 31.27 38.39 4.30
3937 6382 2.413765 CTTACTCGGCGAGGAGGC 59.586 66.667 36.81 0.00 38.39 4.70
3945 6390 4.081050 GCGAGGAGGCCAAACTTT 57.919 55.556 5.01 0.00 0.00 2.66
3946 6391 1.581447 GCGAGGAGGCCAAACTTTG 59.419 57.895 5.01 0.00 0.00 2.77
3947 6392 0.889186 GCGAGGAGGCCAAACTTTGA 60.889 55.000 5.01 0.00 0.00 2.69
3948 6393 1.604604 CGAGGAGGCCAAACTTTGAA 58.395 50.000 5.01 0.00 0.00 2.69
3949 6394 2.162681 CGAGGAGGCCAAACTTTGAAT 58.837 47.619 5.01 0.00 0.00 2.57
3950 6395 2.558359 CGAGGAGGCCAAACTTTGAATT 59.442 45.455 5.01 0.00 0.00 2.17
3951 6396 3.756434 CGAGGAGGCCAAACTTTGAATTA 59.244 43.478 5.01 0.00 0.00 1.40
3952 6397 4.379499 CGAGGAGGCCAAACTTTGAATTAC 60.379 45.833 5.01 0.00 0.00 1.89
3953 6398 4.740902 AGGAGGCCAAACTTTGAATTACT 58.259 39.130 5.01 0.00 0.00 2.24
3954 6399 4.524328 AGGAGGCCAAACTTTGAATTACTG 59.476 41.667 5.01 0.00 0.00 2.74
3955 6400 4.237724 GAGGCCAAACTTTGAATTACTGC 58.762 43.478 5.01 0.00 0.00 4.40
3956 6401 2.986479 GGCCAAACTTTGAATTACTGCG 59.014 45.455 0.00 0.00 0.00 5.18
3957 6402 2.986479 GCCAAACTTTGAATTACTGCGG 59.014 45.455 2.87 0.00 0.00 5.69
3958 6403 3.574614 CCAAACTTTGAATTACTGCGGG 58.425 45.455 2.87 0.00 0.00 6.13
3959 6404 3.005367 CCAAACTTTGAATTACTGCGGGT 59.995 43.478 2.87 0.00 0.00 5.28
3960 6405 3.915437 AACTTTGAATTACTGCGGGTG 57.085 42.857 0.00 0.00 0.00 4.61
3961 6406 1.539827 ACTTTGAATTACTGCGGGTGC 59.460 47.619 0.00 0.00 43.20 5.01
3971 6416 2.650778 GCGGGTGCAAAGAAAGGG 59.349 61.111 0.00 0.00 42.15 3.95
3972 6417 1.901464 GCGGGTGCAAAGAAAGGGA 60.901 57.895 0.00 0.00 42.15 4.20
3973 6418 1.250840 GCGGGTGCAAAGAAAGGGAT 61.251 55.000 0.00 0.00 42.15 3.85
3974 6419 1.256812 CGGGTGCAAAGAAAGGGATT 58.743 50.000 0.00 0.00 0.00 3.01
3975 6420 2.442413 CGGGTGCAAAGAAAGGGATTA 58.558 47.619 0.00 0.00 0.00 1.75
3976 6421 3.023832 CGGGTGCAAAGAAAGGGATTAT 58.976 45.455 0.00 0.00 0.00 1.28
3977 6422 3.447229 CGGGTGCAAAGAAAGGGATTATT 59.553 43.478 0.00 0.00 0.00 1.40
3978 6423 4.677779 CGGGTGCAAAGAAAGGGATTATTG 60.678 45.833 0.00 0.00 0.00 1.90
3979 6424 4.222810 GGGTGCAAAGAAAGGGATTATTGT 59.777 41.667 0.00 0.00 0.00 2.71
3980 6425 5.170748 GGTGCAAAGAAAGGGATTATTGTG 58.829 41.667 0.00 0.00 0.00 3.33
3981 6426 5.279456 GGTGCAAAGAAAGGGATTATTGTGT 60.279 40.000 0.00 0.00 0.00 3.72
3982 6427 6.223120 GTGCAAAGAAAGGGATTATTGTGTT 58.777 36.000 0.00 0.00 0.00 3.32
3983 6428 6.146021 GTGCAAAGAAAGGGATTATTGTGTTG 59.854 38.462 0.00 0.00 0.00 3.33
3984 6429 6.183360 TGCAAAGAAAGGGATTATTGTGTTGT 60.183 34.615 0.00 0.00 0.00 3.32
3985 6430 6.146021 GCAAAGAAAGGGATTATTGTGTTGTG 59.854 38.462 0.00 0.00 0.00 3.33
3986 6431 6.976934 AAGAAAGGGATTATTGTGTTGTGT 57.023 33.333 0.00 0.00 0.00 3.72
3987 6432 6.331369 AGAAAGGGATTATTGTGTTGTGTG 57.669 37.500 0.00 0.00 0.00 3.82
3988 6433 6.068010 AGAAAGGGATTATTGTGTTGTGTGA 58.932 36.000 0.00 0.00 0.00 3.58
3989 6434 5.964958 AAGGGATTATTGTGTTGTGTGAG 57.035 39.130 0.00 0.00 0.00 3.51
3990 6435 4.985538 AGGGATTATTGTGTTGTGTGAGT 58.014 39.130 0.00 0.00 0.00 3.41
3991 6436 6.121776 AGGGATTATTGTGTTGTGTGAGTA 57.878 37.500 0.00 0.00 0.00 2.59
3992 6437 6.539173 AGGGATTATTGTGTTGTGTGAGTAA 58.461 36.000 0.00 0.00 0.00 2.24
3993 6438 7.175104 AGGGATTATTGTGTTGTGTGAGTAAT 58.825 34.615 0.00 0.00 0.00 1.89
3994 6439 7.669722 AGGGATTATTGTGTTGTGTGAGTAATT 59.330 33.333 0.00 0.00 0.00 1.40
3995 6440 7.754924 GGGATTATTGTGTTGTGTGAGTAATTG 59.245 37.037 0.00 0.00 0.00 2.32
3996 6441 7.273381 GGATTATTGTGTTGTGTGAGTAATTGC 59.727 37.037 0.00 0.00 0.00 3.56
3997 6442 4.972514 TTGTGTTGTGTGAGTAATTGCA 57.027 36.364 0.00 0.00 0.00 4.08
3998 6443 5.512753 TTGTGTTGTGTGAGTAATTGCAT 57.487 34.783 0.00 0.00 0.00 3.96
3999 6444 4.857799 TGTGTTGTGTGAGTAATTGCATG 58.142 39.130 0.00 0.00 0.00 4.06
4000 6445 3.670055 GTGTTGTGTGAGTAATTGCATGC 59.330 43.478 11.82 11.82 0.00 4.06
4001 6446 3.244976 GTTGTGTGAGTAATTGCATGCC 58.755 45.455 16.68 0.00 0.00 4.40
4002 6447 2.512705 TGTGTGAGTAATTGCATGCCA 58.487 42.857 16.68 4.04 0.00 4.92
4003 6448 3.090790 TGTGTGAGTAATTGCATGCCAT 58.909 40.909 16.68 6.88 0.00 4.40
4004 6449 3.119424 TGTGTGAGTAATTGCATGCCATG 60.119 43.478 16.68 0.00 0.00 3.66
4005 6450 3.129113 GTGTGAGTAATTGCATGCCATGA 59.871 43.478 16.68 0.00 0.00 3.07
4006 6451 3.955551 TGTGAGTAATTGCATGCCATGAT 59.044 39.130 16.68 1.03 0.00 2.45
4007 6452 4.202070 TGTGAGTAATTGCATGCCATGATG 60.202 41.667 16.68 0.00 0.00 3.07
4008 6453 3.319689 TGAGTAATTGCATGCCATGATGG 59.680 43.478 16.68 7.21 41.55 3.51
4009 6454 3.302161 AGTAATTGCATGCCATGATGGT 58.698 40.909 16.68 0.00 40.46 3.55
4010 6455 2.613026 AATTGCATGCCATGATGGTG 57.387 45.000 16.68 5.51 40.46 4.17
4011 6456 0.756294 ATTGCATGCCATGATGGTGG 59.244 50.000 16.68 4.17 40.46 4.61
4012 6457 0.324460 TTGCATGCCATGATGGTGGA 60.324 50.000 16.68 2.57 42.02 4.02
4013 6458 0.105913 TGCATGCCATGATGGTGGAT 60.106 50.000 16.68 0.24 42.02 3.41
4014 6459 0.317160 GCATGCCATGATGGTGGATG 59.683 55.000 13.84 13.27 42.02 3.51
4015 6460 1.699730 CATGCCATGATGGTGGATGT 58.300 50.000 13.84 0.00 42.02 3.06
4016 6461 1.611977 CATGCCATGATGGTGGATGTC 59.388 52.381 13.84 0.00 42.02 3.06
4017 6462 0.921166 TGCCATGATGGTGGATGTCT 59.079 50.000 13.84 0.00 42.02 3.41
4018 6463 1.285667 TGCCATGATGGTGGATGTCTT 59.714 47.619 13.84 0.00 42.02 3.01
4019 6464 1.679680 GCCATGATGGTGGATGTCTTG 59.320 52.381 13.84 0.00 42.02 3.02
4020 6465 2.947243 GCCATGATGGTGGATGTCTTGT 60.947 50.000 13.84 0.00 42.02 3.16
4021 6466 3.685265 GCCATGATGGTGGATGTCTTGTA 60.685 47.826 13.84 0.00 42.02 2.41
4022 6467 4.525996 CCATGATGGTGGATGTCTTGTAA 58.474 43.478 2.54 0.00 42.02 2.41
4023 6468 4.949238 CCATGATGGTGGATGTCTTGTAAA 59.051 41.667 2.54 0.00 42.02 2.01
4024 6469 5.418524 CCATGATGGTGGATGTCTTGTAAAA 59.581 40.000 2.54 0.00 42.02 1.52
4025 6470 5.957842 TGATGGTGGATGTCTTGTAAAAC 57.042 39.130 0.00 0.00 0.00 2.43
4026 6471 5.630121 TGATGGTGGATGTCTTGTAAAACT 58.370 37.500 0.00 0.00 0.00 2.66
4027 6472 5.705441 TGATGGTGGATGTCTTGTAAAACTC 59.295 40.000 0.00 0.00 0.00 3.01
4028 6473 5.304686 TGGTGGATGTCTTGTAAAACTCT 57.695 39.130 0.00 0.00 0.00 3.24
4029 6474 6.428083 TGGTGGATGTCTTGTAAAACTCTA 57.572 37.500 0.00 0.00 0.00 2.43
4030 6475 7.016153 TGGTGGATGTCTTGTAAAACTCTAT 57.984 36.000 0.00 0.00 0.00 1.98
4031 6476 7.458397 TGGTGGATGTCTTGTAAAACTCTATT 58.542 34.615 0.00 0.00 0.00 1.73
4032 6477 7.942341 TGGTGGATGTCTTGTAAAACTCTATTT 59.058 33.333 0.00 0.00 0.00 1.40
4033 6478 8.451748 GGTGGATGTCTTGTAAAACTCTATTTC 58.548 37.037 0.00 0.00 0.00 2.17
4034 6479 8.451748 GTGGATGTCTTGTAAAACTCTATTTCC 58.548 37.037 0.00 0.00 0.00 3.13
4035 6480 7.610305 TGGATGTCTTGTAAAACTCTATTTCCC 59.390 37.037 0.00 0.00 0.00 3.97
4036 6481 7.067129 GGATGTCTTGTAAAACTCTATTTCCCC 59.933 40.741 0.00 0.00 0.00 4.81
4037 6482 7.086685 TGTCTTGTAAAACTCTATTTCCCCT 57.913 36.000 0.00 0.00 0.00 4.79
4038 6483 7.166167 TGTCTTGTAAAACTCTATTTCCCCTC 58.834 38.462 0.00 0.00 0.00 4.30
4039 6484 7.017254 TGTCTTGTAAAACTCTATTTCCCCTCT 59.983 37.037 0.00 0.00 0.00 3.69
4040 6485 7.883833 GTCTTGTAAAACTCTATTTCCCCTCTT 59.116 37.037 0.00 0.00 0.00 2.85
4041 6486 9.108111 TCTTGTAAAACTCTATTTCCCCTCTTA 57.892 33.333 0.00 0.00 0.00 2.10
4042 6487 9.907229 CTTGTAAAACTCTATTTCCCCTCTTAT 57.093 33.333 0.00 0.00 0.00 1.73
4056 6501 7.259088 TCCCCTCTTATTTAATAGATGAGGC 57.741 40.000 17.26 0.00 38.50 4.70
4057 6502 6.792473 TCCCCTCTTATTTAATAGATGAGGCA 59.208 38.462 17.26 9.03 38.50 4.75
4058 6503 7.294720 TCCCCTCTTATTTAATAGATGAGGCAA 59.705 37.037 17.26 9.74 38.50 4.52
4059 6504 7.944554 CCCCTCTTATTTAATAGATGAGGCAAA 59.055 37.037 17.26 0.00 38.50 3.68
4060 6505 9.525826 CCCTCTTATTTAATAGATGAGGCAAAT 57.474 33.333 17.26 0.00 38.50 2.32
4067 6512 8.931385 TTTAATAGATGAGGCAAATCTTTTGC 57.069 30.769 14.88 14.88 44.22 3.68
4073 6518 3.586430 GCAAATCTTTTGCCACCGT 57.414 47.368 12.74 0.00 39.38 4.83
4074 6519 1.864565 GCAAATCTTTTGCCACCGTT 58.135 45.000 12.74 0.00 39.38 4.44
4075 6520 2.209273 GCAAATCTTTTGCCACCGTTT 58.791 42.857 12.74 0.00 39.38 3.60
4076 6521 2.220824 GCAAATCTTTTGCCACCGTTTC 59.779 45.455 12.74 0.00 39.38 2.78
4077 6522 3.452474 CAAATCTTTTGCCACCGTTTCA 58.548 40.909 0.00 0.00 0.00 2.69
4078 6523 3.810310 AATCTTTTGCCACCGTTTCAA 57.190 38.095 0.00 0.00 0.00 2.69
4079 6524 3.810310 ATCTTTTGCCACCGTTTCAAA 57.190 38.095 0.00 0.00 0.00 2.69
4080 6525 3.594603 TCTTTTGCCACCGTTTCAAAA 57.405 38.095 7.21 7.21 37.36 2.44
4081 6526 3.923827 CTTTTGCCACCGTTTCAAAAG 57.076 42.857 15.21 15.21 45.37 2.27
4082 6527 3.594603 TTTTGCCACCGTTTCAAAAGA 57.405 38.095 4.43 0.00 35.53 2.52
4083 6528 3.594603 TTTGCCACCGTTTCAAAAGAA 57.405 38.095 0.00 0.00 0.00 2.52
4084 6529 3.594603 TTGCCACCGTTTCAAAAGAAA 57.405 38.095 0.00 0.00 0.00 2.52
4085 6530 3.594603 TGCCACCGTTTCAAAAGAAAA 57.405 38.095 0.00 0.00 0.00 2.29
4086 6531 3.926616 TGCCACCGTTTCAAAAGAAAAA 58.073 36.364 0.00 0.00 0.00 1.94
4087 6532 3.929610 TGCCACCGTTTCAAAAGAAAAAG 59.070 39.130 0.00 0.00 0.00 2.27
4088 6533 4.177783 GCCACCGTTTCAAAAGAAAAAGA 58.822 39.130 0.00 0.00 0.00 2.52
4089 6534 4.627900 GCCACCGTTTCAAAAGAAAAAGAA 59.372 37.500 0.00 0.00 0.00 2.52
4090 6535 5.120986 GCCACCGTTTCAAAAGAAAAAGAAA 59.879 36.000 0.00 0.00 0.00 2.52
4091 6536 6.347806 GCCACCGTTTCAAAAGAAAAAGAAAA 60.348 34.615 0.00 0.00 32.44 2.29
4092 6537 7.577107 CCACCGTTTCAAAAGAAAAAGAAAAA 58.423 30.769 0.00 0.00 32.44 1.94
4125 6570 4.218200 TGTGCAATGGAAATTGTCACTAGG 59.782 41.667 18.09 0.00 38.33 3.02
4142 6587 3.452627 ACTAGGTTTGCCATCAGTAGGAG 59.547 47.826 0.00 0.00 37.19 3.69
4183 6628 3.390639 CCCTTAGGAATGAGCTGATGAGT 59.609 47.826 0.00 0.00 33.47 3.41
4184 6629 4.590647 CCCTTAGGAATGAGCTGATGAGTA 59.409 45.833 0.00 0.00 33.47 2.59
4187 6632 7.222872 CCTTAGGAATGAGCTGATGAGTAATT 58.777 38.462 0.00 0.00 0.00 1.40
4188 6633 7.172875 CCTTAGGAATGAGCTGATGAGTAATTG 59.827 40.741 0.00 0.00 0.00 2.32
4189 6634 5.374921 AGGAATGAGCTGATGAGTAATTGG 58.625 41.667 0.00 0.00 0.00 3.16
4190 6635 5.131642 AGGAATGAGCTGATGAGTAATTGGA 59.868 40.000 0.00 0.00 0.00 3.53
4191 6636 5.469421 GGAATGAGCTGATGAGTAATTGGAG 59.531 44.000 0.00 0.00 0.00 3.86
4192 6637 5.883685 ATGAGCTGATGAGTAATTGGAGA 57.116 39.130 0.00 0.00 0.00 3.71
4193 6638 5.883685 TGAGCTGATGAGTAATTGGAGAT 57.116 39.130 0.00 0.00 0.00 2.75
4194 6639 6.244552 TGAGCTGATGAGTAATTGGAGATT 57.755 37.500 0.00 0.00 0.00 2.40
4195 6640 6.656902 TGAGCTGATGAGTAATTGGAGATTT 58.343 36.000 0.00 0.00 0.00 2.17
4196 6641 7.114754 TGAGCTGATGAGTAATTGGAGATTTT 58.885 34.615 0.00 0.00 0.00 1.82
4197 6642 7.613022 TGAGCTGATGAGTAATTGGAGATTTTT 59.387 33.333 0.00 0.00 0.00 1.94
4312 6757 9.827411 GAAATTAAAATACAGACACTCCTTCAC 57.173 33.333 0.00 0.00 0.00 3.18
4353 6802 4.447138 TGGTACACCTGAACTCCAAAAT 57.553 40.909 0.00 0.00 36.82 1.82
4357 6806 2.362077 ACACCTGAACTCCAAAATGTGC 59.638 45.455 0.00 0.00 0.00 4.57
4358 6807 2.361757 CACCTGAACTCCAAAATGTGCA 59.638 45.455 0.00 0.00 0.00 4.57
4359 6808 2.624838 ACCTGAACTCCAAAATGTGCAG 59.375 45.455 0.00 0.00 39.06 4.41
4360 6809 2.886523 CCTGAACTCCAAAATGTGCAGA 59.113 45.455 2.93 0.00 41.21 4.26
4361 6810 3.304928 CCTGAACTCCAAAATGTGCAGAC 60.305 47.826 2.93 0.00 41.21 3.51
4386 6835 1.131126 CCACATCCACGCTTCATCAAC 59.869 52.381 0.00 0.00 0.00 3.18
4387 6836 2.079158 CACATCCACGCTTCATCAACT 58.921 47.619 0.00 0.00 0.00 3.16
4432 6934 2.417787 GCAAGGGTGTAGGTTACGGTAG 60.418 54.545 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 23 9.541143 CCAAAAGTTTTCCTTTGCTATTTCTTA 57.459 29.630 0.00 0.00 42.62 2.10
29 31 3.111484 TCCCCAAAAGTTTTCCTTTGCT 58.889 40.909 0.00 0.00 42.62 3.91
37 39 6.826231 CCAACACTTAATTCCCCAAAAGTTTT 59.174 34.615 0.00 0.00 29.93 2.43
64 66 2.619590 GGGACGGTGTCATAAAACCCAT 60.620 50.000 0.00 0.00 36.47 4.00
78 80 1.419381 AATTGCCAAAAAGGGACGGT 58.581 45.000 0.00 0.00 37.51 4.83
106 119 3.905493 TCCATTCCCAAAAACCCACTA 57.095 42.857 0.00 0.00 0.00 2.74
166 179 7.917505 GCGAGATCCAATTTTAGTTCATGAATT 59.082 33.333 12.12 10.23 0.00 2.17
167 180 7.284034 AGCGAGATCCAATTTTAGTTCATGAAT 59.716 33.333 12.12 3.70 0.00 2.57
249 262 4.941263 GGATCAACACACTAATAGGCAACA 59.059 41.667 0.00 0.00 41.41 3.33
263 276 9.791838 GATTTTAAACAAAATTCGGATCAACAC 57.208 29.630 0.00 0.00 32.92 3.32
345 1780 5.503498 GTGTGCGACTTGTAAACATGTTAA 58.497 37.500 12.39 1.61 34.86 2.01
388 1823 8.405531 ACATCATCGTCAAAAAGAAAGAAAGAA 58.594 29.630 0.00 0.00 0.00 2.52
390 1825 7.857389 TCACATCATCGTCAAAAAGAAAGAAAG 59.143 33.333 0.00 0.00 0.00 2.62
468 1904 4.618489 CCACTTGAATCATGCGTTTCTTTC 59.382 41.667 0.00 0.00 0.00 2.62
470 1906 3.612479 GCCACTTGAATCATGCGTTTCTT 60.612 43.478 0.00 0.00 0.00 2.52
471 1907 2.095059 GCCACTTGAATCATGCGTTTCT 60.095 45.455 0.00 0.00 0.00 2.52
472 1908 2.253603 GCCACTTGAATCATGCGTTTC 58.746 47.619 0.00 0.00 0.00 2.78
473 1909 1.401409 CGCCACTTGAATCATGCGTTT 60.401 47.619 8.20 0.00 37.44 3.60
474 1910 0.168788 CGCCACTTGAATCATGCGTT 59.831 50.000 8.20 0.00 37.44 4.84
475 1911 1.796151 CGCCACTTGAATCATGCGT 59.204 52.632 8.20 0.00 37.44 5.24
476 1912 0.521867 CACGCCACTTGAATCATGCG 60.522 55.000 12.85 12.85 46.69 4.73
477 1913 0.523072 ACACGCCACTTGAATCATGC 59.477 50.000 0.00 0.00 0.00 4.06
513 1949 8.805175 TGATCCAAATTCATGTAGTGTTTGAAT 58.195 29.630 0.00 0.00 40.78 2.57
516 1952 8.815141 TTTGATCCAAATTCATGTAGTGTTTG 57.185 30.769 0.00 0.00 0.00 2.93
517 1953 9.480053 CTTTTGATCCAAATTCATGTAGTGTTT 57.520 29.630 0.00 0.00 33.19 2.83
579 2015 7.864108 AAAGGAAAAATTTCAAACCTCTTGG 57.136 32.000 8.06 0.00 38.92 3.61
637 2073 5.641783 TTCGCATGATTGAAATCCTTTGA 57.358 34.783 0.00 0.00 34.50 2.69
638 2074 6.037726 TGATTCGCATGATTGAAATCCTTTG 58.962 36.000 0.00 0.00 34.50 2.77
693 2129 6.841755 TCAAAGGGTTTTCTTTAGGATTGGAA 59.158 34.615 0.00 0.00 35.44 3.53
711 2147 4.060205 CAGTTTTCTGCCAATTCAAAGGG 58.940 43.478 0.00 0.00 41.24 3.95
721 2157 6.152661 TCTCTTTTCTTTTCAGTTTTCTGCCA 59.847 34.615 0.00 0.00 46.59 4.92
722 2158 6.564328 TCTCTTTTCTTTTCAGTTTTCTGCC 58.436 36.000 0.00 0.00 46.59 4.85
723 2159 8.466086 TTTCTCTTTTCTTTTCAGTTTTCTGC 57.534 30.769 0.00 0.00 46.59 4.26
747 2230 3.053320 GGAGGGATTTGACCTTGGATCTT 60.053 47.826 0.00 0.00 38.79 2.40
748 2231 2.511637 GGAGGGATTTGACCTTGGATCT 59.488 50.000 0.00 0.00 38.79 2.75
749 2232 2.746472 CGGAGGGATTTGACCTTGGATC 60.746 54.545 0.00 0.00 38.79 3.36
750 2233 1.212935 CGGAGGGATTTGACCTTGGAT 59.787 52.381 0.00 0.00 38.79 3.41
751 2234 0.618458 CGGAGGGATTTGACCTTGGA 59.382 55.000 0.00 0.00 38.79 3.53
752 2235 3.175133 CGGAGGGATTTGACCTTGG 57.825 57.895 0.00 0.00 38.79 3.61
794 2284 3.678056 AACGTGTATGTGGTGTCAGAT 57.322 42.857 0.00 0.00 0.00 2.90
817 2307 0.037160 TGGGGTTAGTCGGGAAAAGC 59.963 55.000 0.00 0.00 0.00 3.51
891 2381 3.431725 GTTCCGCCGCTCTTTGGG 61.432 66.667 0.00 0.00 0.00 4.12
925 2415 3.093172 GCAGGGAGGAGAAGGGGG 61.093 72.222 0.00 0.00 0.00 5.40
927 2417 0.322906 GTTTGCAGGGAGGAGAAGGG 60.323 60.000 0.00 0.00 0.00 3.95
965 2456 2.043115 GAGGAAAAGGTGGAAGGGGAAT 59.957 50.000 0.00 0.00 0.00 3.01
966 2457 1.427753 GAGGAAAAGGTGGAAGGGGAA 59.572 52.381 0.00 0.00 0.00 3.97
976 2467 1.846124 TCGCCTGGGAGGAAAAGGT 60.846 57.895 0.00 0.00 37.67 3.50
1060 2558 0.385029 TCGAACGGGAACTCGTCAAA 59.615 50.000 0.00 0.00 43.07 2.69
1062 2560 1.577922 CTCGAACGGGAACTCGTCA 59.422 57.895 0.00 0.00 43.07 4.35
1191 2695 1.373590 CGGCCAAACATAAGACCCGG 61.374 60.000 2.24 0.00 0.00 5.73
1192 2696 1.373590 CCGGCCAAACATAAGACCCG 61.374 60.000 2.24 0.00 0.00 5.28
1193 2697 1.035385 CCCGGCCAAACATAAGACCC 61.035 60.000 2.24 0.00 0.00 4.46
1194 2698 0.323087 ACCCGGCCAAACATAAGACC 60.323 55.000 2.24 0.00 0.00 3.85
1195 2699 1.092348 GACCCGGCCAAACATAAGAC 58.908 55.000 2.24 0.00 0.00 3.01
1196 2700 0.693622 TGACCCGGCCAAACATAAGA 59.306 50.000 2.24 0.00 0.00 2.10
1197 2701 0.808755 GTGACCCGGCCAAACATAAG 59.191 55.000 2.24 0.00 0.00 1.73
1198 2702 0.402504 AGTGACCCGGCCAAACATAA 59.597 50.000 2.24 0.00 0.00 1.90
1199 2703 0.402504 AAGTGACCCGGCCAAACATA 59.597 50.000 2.24 0.00 0.00 2.29
1200 2704 0.469144 AAAGTGACCCGGCCAAACAT 60.469 50.000 2.24 0.00 0.00 2.71
1201 2705 1.076632 AAAGTGACCCGGCCAAACA 60.077 52.632 2.24 0.00 0.00 2.83
1202 2706 1.362355 CAAAGTGACCCGGCCAAAC 59.638 57.895 2.24 0.00 0.00 2.93
1203 2707 1.076632 ACAAAGTGACCCGGCCAAA 60.077 52.632 2.24 0.00 0.00 3.28
1204 2708 1.826054 CACAAAGTGACCCGGCCAA 60.826 57.895 2.24 0.00 35.23 4.52
1205 2709 2.203280 CACAAAGTGACCCGGCCA 60.203 61.111 2.24 0.00 35.23 5.36
1206 2710 1.966451 CTCACAAAGTGACCCGGCC 60.966 63.158 0.00 0.00 37.67 6.13
1207 2711 0.818040 AACTCACAAAGTGACCCGGC 60.818 55.000 0.00 0.00 37.67 6.13
1220 2724 1.004595 GCCCGTAATTCCGAACTCAC 58.995 55.000 0.00 0.00 0.00 3.51
1223 2727 0.107848 CTGGCCCGTAATTCCGAACT 60.108 55.000 0.00 0.00 0.00 3.01
1231 2735 1.810412 GCTCGAAATCTGGCCCGTAAT 60.810 52.381 0.00 0.00 0.00 1.89
1251 2755 5.475719 TGTCCTAACATCGTAAAACAGGAG 58.524 41.667 0.00 0.00 31.58 3.69
1276 2780 1.134946 GCCCAAAGATCCCAACAATCG 59.865 52.381 0.00 0.00 0.00 3.34
1332 2836 1.290203 ATAGCACGCACGATCTTTGG 58.710 50.000 0.00 0.00 0.00 3.28
1399 2903 8.100791 ACACCATTTAACTCTTCACAGCTAATA 58.899 33.333 0.00 0.00 0.00 0.98
1401 2905 6.296026 ACACCATTTAACTCTTCACAGCTAA 58.704 36.000 0.00 0.00 0.00 3.09
1425 2932 5.385509 TCATTCAGTCTTACACGACATGA 57.614 39.130 0.00 0.00 36.38 3.07
1460 2967 4.570772 ACTGTATATTACCAGCGCAGTTTG 59.429 41.667 11.47 0.00 32.62 2.93
1512 3019 6.691388 GGCAGTTCACAGTTACTAACAAAAAG 59.309 38.462 1.79 0.00 0.00 2.27
1522 3029 1.873591 CACAGGGCAGTTCACAGTTAC 59.126 52.381 0.00 0.00 0.00 2.50
1540 3047 4.380531 TCACCATCTCTTCACAGTTTCAC 58.619 43.478 0.00 0.00 0.00 3.18
1584 3251 4.180057 CTGAAGCAGGATGTTGAGAGTAC 58.820 47.826 0.00 0.00 39.31 2.73
1652 3326 4.174704 TGCCCTCATGCTAATGAAATCT 57.825 40.909 0.00 0.00 42.28 2.40
1710 3384 1.676006 GGGAAATGTGATAGTTGCCCG 59.324 52.381 0.00 0.00 38.72 6.13
1841 3515 0.905357 ATAGACAGCCGCCAAGAACT 59.095 50.000 0.00 0.00 0.00 3.01
1850 3524 1.067060 TCGGTGATTCATAGACAGCCG 59.933 52.381 3.87 3.87 39.33 5.52
2058 3732 1.405105 CAGTTCTGGTGTGTTGGTTGG 59.595 52.381 0.00 0.00 0.00 3.77
2192 3866 3.056821 CACATCCGAAGTGAACTACCTCA 60.057 47.826 0.00 0.00 39.30 3.86
2196 3870 1.654105 CGCACATCCGAAGTGAACTAC 59.346 52.381 7.93 0.00 39.30 2.73
2198 3872 0.033504 ACGCACATCCGAAGTGAACT 59.966 50.000 7.93 0.00 39.30 3.01
2199 3873 0.438830 GACGCACATCCGAAGTGAAC 59.561 55.000 7.93 0.00 39.30 3.18
2200 3874 0.032815 TGACGCACATCCGAAGTGAA 59.967 50.000 7.93 0.00 39.30 3.18
2208 3897 1.089920 AGCATTCTTGACGCACATCC 58.910 50.000 0.00 0.00 0.00 3.51
2266 3955 8.776376 AACATATGAACCATCCAAAAATCAAC 57.224 30.769 10.38 0.00 0.00 3.18
2306 3995 4.379302 AAGAGGAACTTGAGAAGCCAAT 57.621 40.909 0.00 0.00 41.55 3.16
2332 4021 2.129555 TTGCTTCTCCCCTGGCTCAC 62.130 60.000 0.00 0.00 0.00 3.51
2372 4061 7.796054 ACTTCCACAGCTACACATATTAAGAT 58.204 34.615 0.00 0.00 0.00 2.40
2385 4074 5.131067 AGTGACGATATACTTCCACAGCTA 58.869 41.667 0.00 0.00 0.00 3.32
2436 4125 0.036732 TGGTCACACCATTGCCTCTC 59.963 55.000 0.00 0.00 44.79 3.20
2563 4253 6.173427 TCCATAAGCACAGCATATCAACTA 57.827 37.500 0.00 0.00 0.00 2.24
2622 4312 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2623 4313 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2624 4314 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2625 4315 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2626 4316 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2627 4317 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2628 4318 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
2629 4319 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2630 4320 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
2631 4321 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
2632 4322 7.273381 GTCCATTTTGATGACAAGTATTTTCGG 59.727 37.037 0.00 0.00 37.32 4.30
2633 4323 7.807433 TGTCCATTTTGATGACAAGTATTTTCG 59.193 33.333 0.00 0.00 37.32 3.46
2634 4324 9.474920 TTGTCCATTTTGATGACAAGTATTTTC 57.525 29.630 0.00 0.00 37.32 2.29
2635 4325 9.829507 TTTGTCCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.13 1.82
2636 4326 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
2637 4327 9.829507 TTTTTGTCCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.13 1.89
2639 4329 9.258826 CATTTTTGTCCATTTTGATGACAAGTA 57.741 29.630 0.00 0.00 37.13 2.24
2640 4330 7.227116 CCATTTTTGTCCATTTTGATGACAAGT 59.773 33.333 0.00 0.00 37.13 3.16
2641 4331 7.441760 TCCATTTTTGTCCATTTTGATGACAAG 59.558 33.333 0.00 0.00 37.13 3.16
2642 4332 7.278135 TCCATTTTTGTCCATTTTGATGACAA 58.722 30.769 0.00 0.00 34.47 3.18
2643 4333 6.824553 TCCATTTTTGTCCATTTTGATGACA 58.175 32.000 0.00 0.00 0.00 3.58
2644 4334 7.388500 ACATCCATTTTTGTCCATTTTGATGAC 59.612 33.333 0.00 0.00 32.39 3.06
2645 4335 7.451732 ACATCCATTTTTGTCCATTTTGATGA 58.548 30.769 0.00 0.00 32.39 2.92
2646 4336 7.675962 ACATCCATTTTTGTCCATTTTGATG 57.324 32.000 0.00 0.00 33.80 3.07
2647 4337 9.603921 GATACATCCATTTTTGTCCATTTTGAT 57.396 29.630 0.00 0.00 0.00 2.57
2648 4338 8.814931 AGATACATCCATTTTTGTCCATTTTGA 58.185 29.630 0.00 0.00 0.00 2.69
2651 4341 9.699410 TCTAGATACATCCATTTTTGTCCATTT 57.301 29.630 0.00 0.00 0.00 2.32
2652 4342 9.699410 TTCTAGATACATCCATTTTTGTCCATT 57.301 29.630 0.00 0.00 0.00 3.16
2653 4343 9.125026 GTTCTAGATACATCCATTTTTGTCCAT 57.875 33.333 0.00 0.00 0.00 3.41
2654 4344 8.328758 AGTTCTAGATACATCCATTTTTGTCCA 58.671 33.333 0.00 0.00 0.00 4.02
2655 4345 8.738645 AGTTCTAGATACATCCATTTTTGTCC 57.261 34.615 0.00 0.00 0.00 4.02
2708 4398 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
2709 4399 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
2710 4400 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
2711 4401 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2712 4402 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2713 4403 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2714 4404 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2715 4405 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2716 4406 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
2717 4407 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
2718 4408 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
2719 4409 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2720 4410 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2721 4411 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2722 4412 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2723 4413 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2724 4414 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2725 4415 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2726 4416 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2727 4417 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2728 4418 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
2729 4419 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
2730 4420 1.565390 TTCTACTCCCTCCGTCCGGA 61.565 60.000 0.00 0.00 42.90 5.14
2731 4421 0.682209 TTTCTACTCCCTCCGTCCGG 60.682 60.000 0.00 0.00 0.00 5.14
2732 4422 0.739561 CTTTCTACTCCCTCCGTCCG 59.260 60.000 0.00 0.00 0.00 4.79
2733 4423 1.112950 CCTTTCTACTCCCTCCGTCC 58.887 60.000 0.00 0.00 0.00 4.79
2734 4424 2.025898 CTCCTTTCTACTCCCTCCGTC 58.974 57.143 0.00 0.00 0.00 4.79
2735 4425 1.342175 CCTCCTTTCTACTCCCTCCGT 60.342 57.143 0.00 0.00 0.00 4.69
2736 4426 1.063867 TCCTCCTTTCTACTCCCTCCG 60.064 57.143 0.00 0.00 0.00 4.63
2737 4427 2.850695 TCCTCCTTTCTACTCCCTCC 57.149 55.000 0.00 0.00 0.00 4.30
2738 4428 3.386402 CACATCCTCCTTTCTACTCCCTC 59.614 52.174 0.00 0.00 0.00 4.30
2739 4429 3.379452 CACATCCTCCTTTCTACTCCCT 58.621 50.000 0.00 0.00 0.00 4.20
2740 4430 2.158885 GCACATCCTCCTTTCTACTCCC 60.159 54.545 0.00 0.00 0.00 4.30
2741 4431 2.501723 TGCACATCCTCCTTTCTACTCC 59.498 50.000 0.00 0.00 0.00 3.85
2742 4432 3.895232 TGCACATCCTCCTTTCTACTC 57.105 47.619 0.00 0.00 0.00 2.59
2743 4433 4.851639 AATGCACATCCTCCTTTCTACT 57.148 40.909 0.00 0.00 0.00 2.57
2744 4434 4.816925 GGTAATGCACATCCTCCTTTCTAC 59.183 45.833 0.00 0.00 0.00 2.59
2745 4435 4.141482 GGGTAATGCACATCCTCCTTTCTA 60.141 45.833 0.00 0.00 0.00 2.10
2746 4436 3.372025 GGGTAATGCACATCCTCCTTTCT 60.372 47.826 0.00 0.00 0.00 2.52
2802 4493 5.048504 GGCATCTCAACTTCAAAGTGAATGA 60.049 40.000 0.00 0.00 39.66 2.57
2998 4692 9.985318 CAAGATATGAGAAGATCAAAAGTGTTC 57.015 33.333 0.00 0.00 42.53 3.18
3006 4700 6.827251 AGCAAAGCAAGATATGAGAAGATCAA 59.173 34.615 0.00 0.00 42.53 2.57
3052 4746 5.888105 ACATGCAGCTTCACATAAGATTTC 58.112 37.500 0.00 0.00 0.00 2.17
3074 4768 3.285484 ACATGATTGCAGGATCCAGAAC 58.715 45.455 15.82 0.14 0.00 3.01
3220 4919 3.693359 GCACCCCTAGTAGTCTTATCCCA 60.693 52.174 0.00 0.00 0.00 4.37
3227 4926 4.880164 TGAATTAGCACCCCTAGTAGTCT 58.120 43.478 0.00 0.00 0.00 3.24
3247 4946 8.918202 AAGAACAAAACAAGGTACATAGATGA 57.082 30.769 0.00 0.00 0.00 2.92
3248 4947 8.783093 TGAAGAACAAAACAAGGTACATAGATG 58.217 33.333 0.00 0.00 0.00 2.90
3461 5847 3.751518 GGCTAGACCCTTTCTTGAACAA 58.248 45.455 0.00 0.00 35.55 2.83
3575 5961 4.116113 ACAATAGTTAATCCCCAGGACCA 58.884 43.478 0.00 0.00 32.98 4.02
3632 6028 6.699575 TTTATTCTTAAGCCTGGAGATTGC 57.300 37.500 0.00 0.00 0.00 3.56
3658 6054 2.095372 GGGCGGAGTCAACGAATAAAAG 59.905 50.000 0.00 0.00 0.00 2.27
3663 6059 2.267961 GGGGCGGAGTCAACGAAT 59.732 61.111 0.00 0.00 0.00 3.34
3696 6092 1.265095 CGCTTGACTGCAGAACACAAT 59.735 47.619 23.35 0.00 0.00 2.71
3713 6109 2.932261 AGGGAACAAGAGAAAAACGCT 58.068 42.857 0.00 0.00 0.00 5.07
3732 6128 6.721571 AAGGATTGACGTAACACACAATAG 57.278 37.500 0.00 0.00 33.92 1.73
3733 6129 7.499321 AAAAGGATTGACGTAACACACAATA 57.501 32.000 0.00 0.00 33.92 1.90
3735 6131 5.821516 AAAAGGATTGACGTAACACACAA 57.178 34.783 0.00 0.00 0.00 3.33
3736 6132 7.308109 GGAATAAAAGGATTGACGTAACACACA 60.308 37.037 0.00 0.00 0.00 3.72
3738 6134 6.938030 AGGAATAAAAGGATTGACGTAACACA 59.062 34.615 0.00 0.00 0.00 3.72
3739 6135 7.373778 AGGAATAAAAGGATTGACGTAACAC 57.626 36.000 0.00 0.00 0.00 3.32
3740 6136 6.311935 CGAGGAATAAAAGGATTGACGTAACA 59.688 38.462 0.00 0.00 0.00 2.41
3741 6137 6.312180 ACGAGGAATAAAAGGATTGACGTAAC 59.688 38.462 0.00 0.00 0.00 2.50
3743 6139 5.808540 CACGAGGAATAAAAGGATTGACGTA 59.191 40.000 0.00 0.00 0.00 3.57
3744 6140 4.630069 CACGAGGAATAAAAGGATTGACGT 59.370 41.667 0.00 0.00 0.00 4.34
3745 6141 4.494199 GCACGAGGAATAAAAGGATTGACG 60.494 45.833 0.00 0.00 0.00 4.35
3746 6142 4.394920 TGCACGAGGAATAAAAGGATTGAC 59.605 41.667 0.00 0.00 0.00 3.18
3748 6144 4.438744 GGTGCACGAGGAATAAAAGGATTG 60.439 45.833 11.45 0.00 0.00 2.67
3751 6147 2.706890 GGTGCACGAGGAATAAAAGGA 58.293 47.619 11.45 0.00 0.00 3.36
3765 6210 2.280797 TGTTCAGCTCCGGTGCAC 60.281 61.111 28.68 18.74 34.99 4.57
3773 6218 0.883833 CACCCCATTGTGTTCAGCTC 59.116 55.000 0.00 0.00 0.00 4.09
3790 6235 4.201950 ACAGAAAGAACACAGCAATGTCAC 60.202 41.667 0.00 0.00 30.55 3.67
3822 6267 0.250209 AGCACCAGTGTTCAGCTCAG 60.250 55.000 0.00 0.00 0.00 3.35
3823 6268 0.181114 AAGCACCAGTGTTCAGCTCA 59.819 50.000 0.00 0.00 33.83 4.26
3824 6269 0.590195 CAAGCACCAGTGTTCAGCTC 59.410 55.000 0.00 0.00 33.83 4.09
3825 6270 0.107017 ACAAGCACCAGTGTTCAGCT 60.107 50.000 0.00 0.00 37.08 4.24
3826 6271 0.308993 GACAAGCACCAGTGTTCAGC 59.691 55.000 0.00 0.00 0.00 4.26
3827 6272 1.331756 GTGACAAGCACCAGTGTTCAG 59.668 52.381 0.00 0.00 41.78 3.02
3828 6273 1.378531 GTGACAAGCACCAGTGTTCA 58.621 50.000 0.00 0.00 41.78 3.18
3843 6288 3.192844 TCGTTCCAGATAGTCCAAGTGAC 59.807 47.826 0.00 0.00 44.82 3.67
3844 6289 3.427573 TCGTTCCAGATAGTCCAAGTGA 58.572 45.455 0.00 0.00 0.00 3.41
3845 6290 3.444034 TCTCGTTCCAGATAGTCCAAGTG 59.556 47.826 0.00 0.00 0.00 3.16
3846 6291 3.697045 CTCTCGTTCCAGATAGTCCAAGT 59.303 47.826 0.00 0.00 0.00 3.16
3847 6292 3.067461 CCTCTCGTTCCAGATAGTCCAAG 59.933 52.174 0.00 0.00 0.00 3.61
3848 6293 3.024547 CCTCTCGTTCCAGATAGTCCAA 58.975 50.000 0.00 0.00 0.00 3.53
3849 6294 2.241430 TCCTCTCGTTCCAGATAGTCCA 59.759 50.000 0.00 0.00 0.00 4.02
3850 6295 2.933573 TCCTCTCGTTCCAGATAGTCC 58.066 52.381 0.00 0.00 0.00 3.85
3851 6296 3.949113 AGTTCCTCTCGTTCCAGATAGTC 59.051 47.826 0.00 0.00 0.00 2.59
3852 6297 3.949113 GAGTTCCTCTCGTTCCAGATAGT 59.051 47.826 0.00 0.00 33.25 2.12
3853 6298 4.561735 GAGTTCCTCTCGTTCCAGATAG 57.438 50.000 0.00 0.00 33.25 2.08
3864 6309 3.748568 AGAAAAATGTGCGAGTTCCTCTC 59.251 43.478 0.00 0.00 39.62 3.20
3865 6310 3.499918 CAGAAAAATGTGCGAGTTCCTCT 59.500 43.478 0.00 0.00 0.00 3.69
3866 6311 3.814945 CAGAAAAATGTGCGAGTTCCTC 58.185 45.455 0.00 0.00 0.00 3.71
3867 6312 2.030805 GCAGAAAAATGTGCGAGTTCCT 60.031 45.455 0.00 0.00 0.00 3.36
3868 6313 2.287547 TGCAGAAAAATGTGCGAGTTCC 60.288 45.455 0.00 0.00 42.96 3.62
3869 6314 2.998772 TGCAGAAAAATGTGCGAGTTC 58.001 42.857 0.00 0.00 42.96 3.01
3870 6315 3.435105 TTGCAGAAAAATGTGCGAGTT 57.565 38.095 0.00 0.00 42.96 3.01
3871 6316 3.435105 TTTGCAGAAAAATGTGCGAGT 57.565 38.095 0.00 0.00 42.96 4.18
3872 6317 4.775440 TTTTTGCAGAAAAATGTGCGAG 57.225 36.364 0.00 0.00 42.96 5.03
3890 6335 1.658686 TTGGCGTCGGTGCACTTTTT 61.659 50.000 17.98 0.00 36.28 1.94
3891 6336 1.452145 ATTGGCGTCGGTGCACTTTT 61.452 50.000 17.98 0.00 36.28 2.27
3892 6337 1.452145 AATTGGCGTCGGTGCACTTT 61.452 50.000 17.98 0.00 36.28 2.66
3893 6338 1.452145 AAATTGGCGTCGGTGCACTT 61.452 50.000 17.98 0.00 36.28 3.16
3894 6339 1.452145 AAAATTGGCGTCGGTGCACT 61.452 50.000 17.98 0.00 36.28 4.40
3895 6340 0.238817 TAAAATTGGCGTCGGTGCAC 59.761 50.000 8.80 8.80 36.28 4.57
3896 6341 1.169577 ATAAAATTGGCGTCGGTGCA 58.830 45.000 0.00 0.00 36.28 4.57
3897 6342 1.917303 CAATAAAATTGGCGTCGGTGC 59.083 47.619 0.00 0.00 0.00 5.01
3898 6343 1.917303 GCAATAAAATTGGCGTCGGTG 59.083 47.619 0.00 0.00 0.00 4.94
3899 6344 1.466697 CGCAATAAAATTGGCGTCGGT 60.467 47.619 0.00 0.00 44.11 4.69
3900 6345 1.187715 CGCAATAAAATTGGCGTCGG 58.812 50.000 0.00 0.00 44.11 4.79
3905 6350 3.482110 CGAGTAAGCGCAATAAAATTGGC 59.518 43.478 11.47 4.05 0.00 4.52
3906 6351 4.035017 CCGAGTAAGCGCAATAAAATTGG 58.965 43.478 11.47 0.00 0.00 3.16
3907 6352 3.482110 GCCGAGTAAGCGCAATAAAATTG 59.518 43.478 11.47 0.00 0.00 2.32
3908 6353 3.691498 GCCGAGTAAGCGCAATAAAATT 58.309 40.909 11.47 0.00 0.00 1.82
3909 6354 3.334272 GCCGAGTAAGCGCAATAAAAT 57.666 42.857 11.47 0.00 0.00 1.82
3910 6355 2.817538 GCCGAGTAAGCGCAATAAAA 57.182 45.000 11.47 0.00 0.00 1.52
3919 6364 2.413765 CCTCCTCGCCGAGTAAGC 59.586 66.667 13.83 0.00 0.00 3.09
3920 6365 2.413765 GCCTCCTCGCCGAGTAAG 59.586 66.667 13.83 9.80 0.00 2.34
3921 6366 3.145551 GGCCTCCTCGCCGAGTAA 61.146 66.667 13.83 0.00 39.64 2.24
3928 6373 0.889186 TCAAAGTTTGGCCTCCTCGC 60.889 55.000 15.47 0.00 0.00 5.03
3929 6374 1.604604 TTCAAAGTTTGGCCTCCTCG 58.395 50.000 15.47 0.00 0.00 4.63
3930 6375 4.767409 AGTAATTCAAAGTTTGGCCTCCTC 59.233 41.667 15.47 1.93 0.00 3.71
3931 6376 4.524328 CAGTAATTCAAAGTTTGGCCTCCT 59.476 41.667 15.47 4.36 0.00 3.69
3932 6377 4.809673 CAGTAATTCAAAGTTTGGCCTCC 58.190 43.478 15.47 2.24 0.00 4.30
3933 6378 4.237724 GCAGTAATTCAAAGTTTGGCCTC 58.762 43.478 15.47 3.79 0.00 4.70
3934 6379 3.305335 CGCAGTAATTCAAAGTTTGGCCT 60.305 43.478 15.47 3.12 0.00 5.19
3935 6380 2.986479 CGCAGTAATTCAAAGTTTGGCC 59.014 45.455 15.47 0.00 0.00 5.36
3936 6381 2.986479 CCGCAGTAATTCAAAGTTTGGC 59.014 45.455 15.47 8.01 0.00 4.52
3937 6382 3.005367 ACCCGCAGTAATTCAAAGTTTGG 59.995 43.478 15.47 0.00 0.00 3.28
3938 6383 3.980775 CACCCGCAGTAATTCAAAGTTTG 59.019 43.478 9.44 9.44 0.00 2.93
3939 6384 3.552068 GCACCCGCAGTAATTCAAAGTTT 60.552 43.478 0.00 0.00 38.36 2.66
3940 6385 2.030274 GCACCCGCAGTAATTCAAAGTT 60.030 45.455 0.00 0.00 38.36 2.66
3941 6386 1.539827 GCACCCGCAGTAATTCAAAGT 59.460 47.619 0.00 0.00 38.36 2.66
3942 6387 1.539388 TGCACCCGCAGTAATTCAAAG 59.461 47.619 0.00 0.00 45.36 2.77
3943 6388 1.610363 TGCACCCGCAGTAATTCAAA 58.390 45.000 0.00 0.00 45.36 2.69
3944 6389 3.331002 TGCACCCGCAGTAATTCAA 57.669 47.368 0.00 0.00 45.36 2.69
3954 6399 1.250840 ATCCCTTTCTTTGCACCCGC 61.251 55.000 0.00 0.00 39.24 6.13
3955 6400 1.256812 AATCCCTTTCTTTGCACCCG 58.743 50.000 0.00 0.00 0.00 5.28
3956 6401 4.222810 ACAATAATCCCTTTCTTTGCACCC 59.777 41.667 0.00 0.00 0.00 4.61
3957 6402 5.170748 CACAATAATCCCTTTCTTTGCACC 58.829 41.667 0.00 0.00 0.00 5.01
3958 6403 5.783111 ACACAATAATCCCTTTCTTTGCAC 58.217 37.500 0.00 0.00 0.00 4.57
3959 6404 6.183360 ACAACACAATAATCCCTTTCTTTGCA 60.183 34.615 0.00 0.00 0.00 4.08
3960 6405 6.146021 CACAACACAATAATCCCTTTCTTTGC 59.854 38.462 0.00 0.00 0.00 3.68
3961 6406 7.169645 CACACAACACAATAATCCCTTTCTTTG 59.830 37.037 0.00 0.00 0.00 2.77
3962 6407 7.069331 TCACACAACACAATAATCCCTTTCTTT 59.931 33.333 0.00 0.00 0.00 2.52
3963 6408 6.549364 TCACACAACACAATAATCCCTTTCTT 59.451 34.615 0.00 0.00 0.00 2.52
3964 6409 6.068010 TCACACAACACAATAATCCCTTTCT 58.932 36.000 0.00 0.00 0.00 2.52
3965 6410 6.016276 ACTCACACAACACAATAATCCCTTTC 60.016 38.462 0.00 0.00 0.00 2.62
3966 6411 5.833131 ACTCACACAACACAATAATCCCTTT 59.167 36.000 0.00 0.00 0.00 3.11
3967 6412 5.385198 ACTCACACAACACAATAATCCCTT 58.615 37.500 0.00 0.00 0.00 3.95
3968 6413 4.985538 ACTCACACAACACAATAATCCCT 58.014 39.130 0.00 0.00 0.00 4.20
3969 6414 6.811253 TTACTCACACAACACAATAATCCC 57.189 37.500 0.00 0.00 0.00 3.85
3970 6415 7.273381 GCAATTACTCACACAACACAATAATCC 59.727 37.037 0.00 0.00 0.00 3.01
3971 6416 7.807433 TGCAATTACTCACACAACACAATAATC 59.193 33.333 0.00 0.00 0.00 1.75
3972 6417 7.656412 TGCAATTACTCACACAACACAATAAT 58.344 30.769 0.00 0.00 0.00 1.28
3973 6418 7.032377 TGCAATTACTCACACAACACAATAA 57.968 32.000 0.00 0.00 0.00 1.40
3974 6419 6.625873 TGCAATTACTCACACAACACAATA 57.374 33.333 0.00 0.00 0.00 1.90
3975 6420 5.512753 TGCAATTACTCACACAACACAAT 57.487 34.783 0.00 0.00 0.00 2.71
3976 6421 4.972514 TGCAATTACTCACACAACACAA 57.027 36.364 0.00 0.00 0.00 3.33
3977 6422 4.792380 GCATGCAATTACTCACACAACACA 60.792 41.667 14.21 0.00 0.00 3.72
3978 6423 3.670055 GCATGCAATTACTCACACAACAC 59.330 43.478 14.21 0.00 0.00 3.32
3979 6424 3.305267 GGCATGCAATTACTCACACAACA 60.305 43.478 21.36 0.00 0.00 3.33
3980 6425 3.244976 GGCATGCAATTACTCACACAAC 58.755 45.455 21.36 0.00 0.00 3.32
3981 6426 2.889678 TGGCATGCAATTACTCACACAA 59.110 40.909 21.36 0.00 0.00 3.33
3982 6427 2.512705 TGGCATGCAATTACTCACACA 58.487 42.857 21.36 0.00 0.00 3.72
3983 6428 3.129113 TCATGGCATGCAATTACTCACAC 59.871 43.478 22.56 0.00 0.00 3.82
3984 6429 3.354467 TCATGGCATGCAATTACTCACA 58.646 40.909 22.56 4.91 0.00 3.58
3985 6430 4.295870 CATCATGGCATGCAATTACTCAC 58.704 43.478 22.56 0.00 0.00 3.51
3986 6431 3.319689 CCATCATGGCATGCAATTACTCA 59.680 43.478 22.56 6.51 0.00 3.41
3987 6432 3.319972 ACCATCATGGCATGCAATTACTC 59.680 43.478 22.56 0.00 42.67 2.59
3988 6433 3.069016 CACCATCATGGCATGCAATTACT 59.931 43.478 22.56 0.00 42.67 2.24
3989 6434 3.386486 CACCATCATGGCATGCAATTAC 58.614 45.455 22.56 1.47 42.67 1.89
3990 6435 2.365941 CCACCATCATGGCATGCAATTA 59.634 45.455 22.56 5.57 42.67 1.40
3991 6436 1.140052 CCACCATCATGGCATGCAATT 59.860 47.619 22.56 4.25 42.67 2.32
3992 6437 0.756294 CCACCATCATGGCATGCAAT 59.244 50.000 22.56 11.73 42.67 3.56
3993 6438 0.324460 TCCACCATCATGGCATGCAA 60.324 50.000 22.56 9.21 42.67 4.08
3994 6439 0.105913 ATCCACCATCATGGCATGCA 60.106 50.000 22.56 11.82 42.67 3.96
3995 6440 0.317160 CATCCACCATCATGGCATGC 59.683 55.000 22.56 9.90 42.67 4.06
3996 6441 1.611977 GACATCCACCATCATGGCATG 59.388 52.381 21.42 21.42 42.67 4.06
3997 6442 1.497716 AGACATCCACCATCATGGCAT 59.502 47.619 2.52 0.00 42.67 4.40
3998 6443 0.921166 AGACATCCACCATCATGGCA 59.079 50.000 2.52 0.00 42.67 4.92
3999 6444 1.679680 CAAGACATCCACCATCATGGC 59.320 52.381 2.52 0.00 42.67 4.40
4000 6445 3.008835 ACAAGACATCCACCATCATGG 57.991 47.619 0.54 0.54 45.02 3.66
4001 6446 6.151648 AGTTTTACAAGACATCCACCATCATG 59.848 38.462 0.00 0.00 0.00 3.07
4002 6447 6.248433 AGTTTTACAAGACATCCACCATCAT 58.752 36.000 0.00 0.00 0.00 2.45
4003 6448 5.630121 AGTTTTACAAGACATCCACCATCA 58.370 37.500 0.00 0.00 0.00 3.07
4004 6449 5.940470 AGAGTTTTACAAGACATCCACCATC 59.060 40.000 0.00 0.00 0.00 3.51
4005 6450 5.880901 AGAGTTTTACAAGACATCCACCAT 58.119 37.500 0.00 0.00 0.00 3.55
4006 6451 5.304686 AGAGTTTTACAAGACATCCACCA 57.695 39.130 0.00 0.00 0.00 4.17
4007 6452 7.923414 AATAGAGTTTTACAAGACATCCACC 57.077 36.000 0.00 0.00 0.00 4.61
4008 6453 8.451748 GGAAATAGAGTTTTACAAGACATCCAC 58.548 37.037 0.00 0.00 0.00 4.02
4009 6454 7.610305 GGGAAATAGAGTTTTACAAGACATCCA 59.390 37.037 0.00 0.00 0.00 3.41
4010 6455 7.067129 GGGGAAATAGAGTTTTACAAGACATCC 59.933 40.741 0.00 0.00 0.00 3.51
4011 6456 7.829706 AGGGGAAATAGAGTTTTACAAGACATC 59.170 37.037 0.00 0.00 0.00 3.06
4012 6457 7.699878 AGGGGAAATAGAGTTTTACAAGACAT 58.300 34.615 0.00 0.00 0.00 3.06
4013 6458 7.017254 AGAGGGGAAATAGAGTTTTACAAGACA 59.983 37.037 0.00 0.00 0.00 3.41
4014 6459 7.395617 AGAGGGGAAATAGAGTTTTACAAGAC 58.604 38.462 0.00 0.00 0.00 3.01
4015 6460 7.569599 AGAGGGGAAATAGAGTTTTACAAGA 57.430 36.000 0.00 0.00 0.00 3.02
4016 6461 9.907229 ATAAGAGGGGAAATAGAGTTTTACAAG 57.093 33.333 0.00 0.00 0.00 3.16
4030 6475 8.164070 GCCTCATCTATTAAATAAGAGGGGAAA 58.836 37.037 0.00 0.00 41.06 3.13
4031 6476 7.294720 TGCCTCATCTATTAAATAAGAGGGGAA 59.705 37.037 0.00 1.58 41.06 3.97
4032 6477 6.792473 TGCCTCATCTATTAAATAAGAGGGGA 59.208 38.462 0.00 5.24 41.06 4.81
4033 6478 7.020827 TGCCTCATCTATTAAATAAGAGGGG 57.979 40.000 0.00 4.30 41.06 4.79
4034 6479 8.924511 TTTGCCTCATCTATTAAATAAGAGGG 57.075 34.615 0.00 6.97 41.06 4.30
4041 6486 9.538508 GCAAAAGATTTGCCTCATCTATTAAAT 57.461 29.630 15.12 0.00 39.38 1.40
4042 6487 8.931385 GCAAAAGATTTGCCTCATCTATTAAA 57.069 30.769 15.12 0.00 39.38 1.52
4055 6500 1.864565 AACGGTGGCAAAAGATTTGC 58.135 45.000 17.18 17.18 44.22 3.68
4056 6501 3.452474 TGAAACGGTGGCAAAAGATTTG 58.548 40.909 0.00 0.00 0.00 2.32
4057 6502 3.810310 TGAAACGGTGGCAAAAGATTT 57.190 38.095 0.00 0.00 0.00 2.17
4058 6503 3.810310 TTGAAACGGTGGCAAAAGATT 57.190 38.095 0.00 0.00 0.00 2.40
4059 6504 3.810310 TTTGAAACGGTGGCAAAAGAT 57.190 38.095 6.29 0.00 0.00 2.40
4060 6505 3.594603 TTTTGAAACGGTGGCAAAAGA 57.405 38.095 13.87 0.00 36.80 2.52
4061 6506 3.923827 CTTTTGAAACGGTGGCAAAAG 57.076 42.857 22.76 22.76 46.56 2.27
4062 6507 3.594603 TCTTTTGAAACGGTGGCAAAA 57.405 38.095 15.84 15.84 38.68 2.44
4063 6508 3.594603 TTCTTTTGAAACGGTGGCAAA 57.405 38.095 0.00 5.01 35.17 3.68
4064 6509 3.594603 TTTCTTTTGAAACGGTGGCAA 57.405 38.095 0.00 0.00 42.84 4.52
4065 6510 3.594603 TTTTCTTTTGAAACGGTGGCA 57.405 38.095 0.00 0.00 46.80 4.92
4066 6511 4.177783 TCTTTTTCTTTTGAAACGGTGGC 58.822 39.130 0.00 0.00 46.80 5.01
4067 6512 6.713792 TTTCTTTTTCTTTTGAAACGGTGG 57.286 33.333 0.00 0.00 46.80 4.61
4091 6536 2.104451 TCCATTGCACAGCACCATTTTT 59.896 40.909 0.00 0.00 38.71 1.94
4092 6537 1.693062 TCCATTGCACAGCACCATTTT 59.307 42.857 0.00 0.00 38.71 1.82
4093 6538 1.340088 TCCATTGCACAGCACCATTT 58.660 45.000 0.00 0.00 38.71 2.32
4094 6539 1.340088 TTCCATTGCACAGCACCATT 58.660 45.000 0.00 0.00 38.71 3.16
4095 6540 1.340088 TTTCCATTGCACAGCACCAT 58.660 45.000 0.00 0.00 38.71 3.55
4096 6541 1.340088 ATTTCCATTGCACAGCACCA 58.660 45.000 0.00 0.00 38.71 4.17
4097 6542 2.070783 CAATTTCCATTGCACAGCACC 58.929 47.619 0.00 0.00 38.71 5.01
4101 6546 4.247267 AGTGACAATTTCCATTGCACAG 57.753 40.909 17.18 0.00 43.39 3.66
4125 6570 3.010420 GGAACTCCTACTGATGGCAAAC 58.990 50.000 0.00 0.00 0.00 2.93
4197 6642 8.735315 TCATTATCTCCAATTTACTCGCAAAAA 58.265 29.630 0.00 0.00 0.00 1.94
4198 6643 8.275015 TCATTATCTCCAATTTACTCGCAAAA 57.725 30.769 0.00 0.00 0.00 2.44
4199 6644 7.857734 TCATTATCTCCAATTTACTCGCAAA 57.142 32.000 0.00 0.00 0.00 3.68
4200 6645 7.714813 TCATCATTATCTCCAATTTACTCGCAA 59.285 33.333 0.00 0.00 0.00 4.85
4201 6646 7.216494 TCATCATTATCTCCAATTTACTCGCA 58.784 34.615 0.00 0.00 0.00 5.10
4202 6647 7.658179 TCATCATTATCTCCAATTTACTCGC 57.342 36.000 0.00 0.00 0.00 5.03
4203 6648 9.045223 TGTTCATCATTATCTCCAATTTACTCG 57.955 33.333 0.00 0.00 0.00 4.18
4312 6757 1.428448 TTTGGATGACGAAGCGTGAG 58.572 50.000 0.00 0.00 41.37 3.51
4342 6791 2.622942 TGGTCTGCACATTTTGGAGTTC 59.377 45.455 0.00 0.00 44.01 3.01
4347 6796 1.270550 GGTCTGGTCTGCACATTTTGG 59.729 52.381 0.00 0.00 0.00 3.28
4353 6802 0.035317 GATGTGGTCTGGTCTGCACA 59.965 55.000 0.00 0.00 0.00 4.57
4357 6806 0.390340 CGTGGATGTGGTCTGGTCTG 60.390 60.000 0.00 0.00 0.00 3.51
4358 6807 1.975327 CGTGGATGTGGTCTGGTCT 59.025 57.895 0.00 0.00 0.00 3.85
4359 6808 1.741770 GCGTGGATGTGGTCTGGTC 60.742 63.158 0.00 0.00 0.00 4.02
4360 6809 1.768684 AAGCGTGGATGTGGTCTGGT 61.769 55.000 0.00 0.00 0.00 4.00
4361 6810 1.003355 AAGCGTGGATGTGGTCTGG 60.003 57.895 0.00 0.00 0.00 3.86
4386 6835 4.214437 CGCACTGAAAAACTTAGCAAGAG 58.786 43.478 3.37 0.00 0.00 2.85
4387 6836 3.003275 CCGCACTGAAAAACTTAGCAAGA 59.997 43.478 3.37 0.00 0.00 3.02
4432 6934 7.205297 AGTTGGATATTTGTTATGCTCATTGC 58.795 34.615 0.00 0.00 43.25 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.