Multiple sequence alignment - TraesCS5A01G179500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G179500 chr5A 100.000 6560 0 0 1 6560 377333103 377326544 0.000000e+00 12115.0
1 TraesCS5A01G179500 chr1A 96.213 4172 131 19 281 4441 21705554 21709709 0.000000e+00 6804.0
2 TraesCS5A01G179500 chr1A 95.367 1770 63 18 4444 6202 21709746 21711507 0.000000e+00 2796.0
3 TraesCS5A01G179500 chr1A 93.416 243 15 1 1 242 21705310 21705552 6.250000e-95 359.0
4 TraesCS5A01G179500 chr7B 84.991 553 61 17 5436 5981 485611727 485612264 5.790000e-150 542.0
5 TraesCS5A01G179500 chr7B 81.538 130 18 4 6073 6202 485612388 485612511 1.160000e-17 102.0
6 TraesCS5A01G179500 chr5B 93.227 251 10 5 6312 6560 323712309 323712064 4.830000e-96 363.0
7 TraesCS5A01G179500 chr5D 91.633 251 15 4 6310 6560 285556253 285556009 6.300000e-90 342.0
8 TraesCS5A01G179500 chr3B 78.462 130 22 4 6073 6202 805341341 805341218 5.450000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G179500 chr5A 377326544 377333103 6559 True 12115.000000 12115 100.000000 1 6560 1 chr5A.!!$R1 6559
1 TraesCS5A01G179500 chr1A 21705310 21711507 6197 False 3319.666667 6804 94.998667 1 6202 3 chr1A.!!$F1 6201
2 TraesCS5A01G179500 chr7B 485611727 485612511 784 False 322.000000 542 83.264500 5436 6202 2 chr7B.!!$F1 766

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
399 401 1.271054 GCCTCCACGCTATCCAATCAT 60.271 52.381 0.00 0.00 0.00 2.45 F
1126 1133 1.063567 AGGGGGCTACTACTGACTCAG 60.064 57.143 4.36 4.36 37.52 3.35 F
1369 1377 1.325943 GCTTCACTGCTACGAATCAGC 59.674 52.381 0.00 0.00 39.56 4.26 F
1389 1397 1.542472 CTGTGCCTGCAACATTGATGA 59.458 47.619 0.00 0.00 0.00 2.92 F
2745 2758 1.892474 CCCCGAACAACCACATTTCAT 59.108 47.619 0.00 0.00 0.00 2.57 F
3834 3847 0.250901 AAGCAGCCAACAGATTCGGT 60.251 50.000 0.00 0.00 0.00 4.69 F
4935 4982 1.010419 CGTTTCGTTCCAGTACCCCG 61.010 60.000 0.00 0.00 0.00 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1362 1370 0.109412 GTTGCAGGCACAGCTGATTC 60.109 55.0 23.35 8.73 43.00 2.52 R
2553 2566 0.767375 AGCAGTGCCTTCTCCTGAAA 59.233 50.0 12.58 0.00 0.00 2.69 R
3189 3202 0.396435 TCCCATTCGCTTCTGTGTGT 59.604 50.0 0.00 0.00 0.00 3.72 R
3206 3219 5.984926 TCAATTTTGTCTGTTTCTTGCATCC 59.015 36.0 0.00 0.00 0.00 3.51 R
3919 3932 0.820891 AAGTTCTGCAGTGGTGGCTG 60.821 55.0 14.67 0.00 39.37 4.85 R
5410 5460 2.801077 AATGTAGGGGGAGGTTTTCG 57.199 50.0 0.00 0.00 0.00 3.46 R
6307 6417 0.033503 TCAGGTAGAGATGCGTCCCA 60.034 55.0 1.23 0.00 0.00 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.569354 GGGGCGTTGGATTTGTGCA 61.569 57.895 0.00 0.00 0.00 4.57
100 102 2.578713 CCGTTGATCCGTCGACCG 60.579 66.667 10.58 3.37 35.65 4.79
116 118 2.356313 CGTGTGCGTGGAAGCTCT 60.356 61.111 0.00 0.00 38.13 4.09
131 133 1.301677 GCTCTGTTTCTTCCCCTGCG 61.302 60.000 0.00 0.00 0.00 5.18
148 150 3.329386 CTGCGTGTATCTATGGGGATTG 58.671 50.000 0.00 0.00 0.00 2.67
154 156 2.913603 ATCTATGGGGATTGCCATGG 57.086 50.000 7.63 7.63 35.15 3.66
181 183 4.135747 AGCTTCATTTAGGTCTCTGAGC 57.864 45.455 0.00 0.00 0.00 4.26
194 196 7.010339 AGGTCTCTGAGCTAAAACATTAAGT 57.990 36.000 0.00 0.00 38.70 2.24
253 255 5.123805 GAGAGGTCTCTGACTTTAAACGT 57.876 43.478 5.09 0.00 40.61 3.99
254 256 4.872664 AGAGGTCTCTGACTTTAAACGTG 58.127 43.478 0.00 0.00 38.75 4.49
255 257 3.988517 GAGGTCTCTGACTTTAAACGTGG 59.011 47.826 0.00 0.00 32.47 4.94
256 258 2.479275 GGTCTCTGACTTTAAACGTGGC 59.521 50.000 0.00 0.00 32.47 5.01
257 259 2.479275 GTCTCTGACTTTAAACGTGGCC 59.521 50.000 0.00 0.00 0.00 5.36
258 260 2.103432 TCTCTGACTTTAAACGTGGCCA 59.897 45.455 0.00 0.00 0.00 5.36
259 261 2.875933 CTCTGACTTTAAACGTGGCCAA 59.124 45.455 7.24 0.00 0.00 4.52
260 262 2.614983 TCTGACTTTAAACGTGGCCAAC 59.385 45.455 7.24 0.15 0.00 3.77
261 263 2.356382 CTGACTTTAAACGTGGCCAACA 59.644 45.455 7.24 0.00 0.00 3.33
262 264 2.753452 TGACTTTAAACGTGGCCAACAA 59.247 40.909 7.24 0.00 0.00 2.83
263 265 3.192844 TGACTTTAAACGTGGCCAACAAA 59.807 39.130 7.24 2.60 0.00 2.83
264 266 3.776340 ACTTTAAACGTGGCCAACAAAG 58.224 40.909 7.24 14.63 0.00 2.77
265 267 3.193903 ACTTTAAACGTGGCCAACAAAGT 59.806 39.130 7.24 15.26 30.46 2.66
266 268 4.398673 ACTTTAAACGTGGCCAACAAAGTA 59.601 37.500 20.88 4.50 32.45 2.24
267 269 5.068067 ACTTTAAACGTGGCCAACAAAGTAT 59.932 36.000 20.88 6.45 32.45 2.12
268 270 5.517322 TTAAACGTGGCCAACAAAGTATT 57.483 34.783 7.24 0.00 0.00 1.89
269 271 4.394439 AAACGTGGCCAACAAAGTATTT 57.606 36.364 7.24 0.00 40.26 1.40
270 272 3.636282 ACGTGGCCAACAAAGTATTTC 57.364 42.857 7.24 0.00 35.03 2.17
271 273 2.952978 ACGTGGCCAACAAAGTATTTCA 59.047 40.909 7.24 0.00 35.03 2.69
272 274 3.572255 ACGTGGCCAACAAAGTATTTCAT 59.428 39.130 7.24 0.00 35.03 2.57
273 275 4.038642 ACGTGGCCAACAAAGTATTTCATT 59.961 37.500 7.24 0.00 35.03 2.57
274 276 4.621034 CGTGGCCAACAAAGTATTTCATTC 59.379 41.667 7.24 0.00 35.03 2.67
275 277 4.929211 GTGGCCAACAAAGTATTTCATTCC 59.071 41.667 7.24 0.00 35.03 3.01
276 278 4.837860 TGGCCAACAAAGTATTTCATTCCT 59.162 37.500 0.61 0.00 35.03 3.36
277 279 5.306678 TGGCCAACAAAGTATTTCATTCCTT 59.693 36.000 0.61 0.00 35.03 3.36
278 280 6.183361 TGGCCAACAAAGTATTTCATTCCTTT 60.183 34.615 0.61 0.00 35.03 3.11
279 281 6.710295 GGCCAACAAAGTATTTCATTCCTTTT 59.290 34.615 0.00 0.00 35.03 2.27
339 341 1.705002 CCACTGTGACCCCTCAACCA 61.705 60.000 9.86 0.00 0.00 3.67
356 358 1.942657 ACCATCCGATCGATTTGCAAG 59.057 47.619 18.66 0.00 0.00 4.01
363 365 1.669999 ATCGATTTGCAAGGCCAGGC 61.670 55.000 5.01 8.90 0.00 4.85
366 368 1.953231 GATTTGCAAGGCCAGGCTCC 61.953 60.000 12.43 0.00 0.00 4.70
377 379 1.274712 CCAGGCTCCTCTTCTCTGTT 58.725 55.000 0.00 0.00 0.00 3.16
399 401 1.271054 GCCTCCACGCTATCCAATCAT 60.271 52.381 0.00 0.00 0.00 2.45
404 406 3.627123 TCCACGCTATCCAATCATGTTTG 59.373 43.478 9.19 9.19 0.00 2.93
468 471 1.663388 TGAGTTGCATTCGCGTCGT 60.663 52.632 5.77 0.00 42.97 4.34
552 555 5.105877 CGAACCAACTATGAGGTCTAGTTCA 60.106 44.000 0.00 0.00 37.33 3.18
655 658 7.706607 CGAACAAACCTATGAGATATCACTTCA 59.293 37.037 5.32 0.36 0.00 3.02
785 789 9.726232 AACGGAATTACTTCTTGTTTTAAGTTC 57.274 29.630 0.00 0.00 37.19 3.01
824 828 6.293004 ACAGGACAAATGAACAAAGGAAAA 57.707 33.333 0.00 0.00 0.00 2.29
860 865 3.879427 TCCGCACAAAATTAGTGAAACG 58.121 40.909 13.43 8.19 45.86 3.60
969 974 9.349713 ACAACTCCTAATTTGTTCAGTTATTCA 57.650 29.630 0.00 0.00 31.78 2.57
1010 1015 6.917533 ACTAAATGGAAGAAATGTCAGCAAG 58.082 36.000 0.00 0.00 0.00 4.01
1104 1111 5.473504 ACATGTAGGCCAGAAAAACAACTAG 59.526 40.000 5.01 0.00 0.00 2.57
1126 1133 1.063567 AGGGGGCTACTACTGACTCAG 60.064 57.143 4.36 4.36 37.52 3.35
1129 1136 2.832733 GGGGCTACTACTGACTCAGTTT 59.167 50.000 16.89 7.49 42.59 2.66
1280 1288 2.485814 GTCAGCAATGAAGACAACCTCC 59.514 50.000 1.55 0.00 32.68 4.30
1345 1353 5.358298 AGAACATAGTTCGAAAACTTGGC 57.642 39.130 0.00 0.00 43.28 4.52
1348 1356 5.358298 ACATAGTTCGAAAACTTGGCTTC 57.642 39.130 0.00 0.00 43.28 3.86
1362 1370 1.687494 GGCTTCGCTTCACTGCTACG 61.687 60.000 0.00 0.00 0.00 3.51
1369 1377 1.325943 GCTTCACTGCTACGAATCAGC 59.674 52.381 0.00 0.00 39.56 4.26
1389 1397 1.542472 CTGTGCCTGCAACATTGATGA 59.458 47.619 0.00 0.00 0.00 2.92
1590 1598 6.731292 TGTACAATCATCAGCACCTACTAT 57.269 37.500 0.00 0.00 0.00 2.12
1661 1669 7.441890 TTCTCTACTATATTCTTGCTCCTCG 57.558 40.000 0.00 0.00 0.00 4.63
1662 1670 5.413213 TCTCTACTATATTCTTGCTCCTCGC 59.587 44.000 0.00 0.00 39.77 5.03
1679 1687 3.493877 CCTCGCTATCTCAAGCTTGATTG 59.506 47.826 28.57 18.22 40.49 2.67
1740 1748 5.530915 ACAGTGCTCTGCAAAACATTAGTTA 59.469 36.000 15.50 0.00 44.77 2.24
1874 1882 8.520351 GCAAACTAATCTTGGTGGTAAGTTTAT 58.480 33.333 0.00 0.00 34.79 1.40
1909 1917 5.940470 TGAGCCTAAGATCACTTTTTCTTCC 59.060 40.000 0.00 0.00 32.25 3.46
1949 1958 8.203485 TGCATCCAACTCTTTCTTTTAAACAAT 58.797 29.630 0.00 0.00 0.00 2.71
2203 2214 9.136323 ACAATCAGACTTTCCTTTCTTTTACAT 57.864 29.630 0.00 0.00 0.00 2.29
2232 2243 8.675705 TTTGTCCACCACATATATGTATTCTG 57.324 34.615 17.86 10.18 39.39 3.02
2383 2395 5.181245 ACAGTACATCAGTTCCAAATTTCCG 59.819 40.000 0.00 0.00 0.00 4.30
2480 2492 8.522830 AGACATTCATCATTTTCAATACGGTTT 58.477 29.630 0.00 0.00 0.00 3.27
2532 2545 9.968870 TGTCACGCACATATATATACAAAGTAA 57.031 29.630 0.00 0.00 0.00 2.24
2568 2581 3.636153 ATACCTTTCAGGAGAAGGCAC 57.364 47.619 2.93 0.00 37.67 5.01
2669 2682 4.128925 TCTCCATTCGACAATCTCCAAG 57.871 45.455 0.00 0.00 0.00 3.61
2675 2688 5.163814 CCATTCGACAATCTCCAAGAGTTTC 60.164 44.000 0.00 0.00 0.00 2.78
2745 2758 1.892474 CCCCGAACAACCACATTTCAT 59.108 47.619 0.00 0.00 0.00 2.57
2913 2926 5.712152 ATGGTTGGACAAGAAATTCTCAC 57.288 39.130 0.00 0.00 0.00 3.51
2940 2953 5.707298 TGCCTCCTTTTAGAAAACTCATCAG 59.293 40.000 0.00 0.00 0.00 2.90
2966 2979 5.772825 TTGATGACCTGTTTCAGAAAAGG 57.227 39.130 16.57 16.57 32.44 3.11
2967 2980 4.792068 TGATGACCTGTTTCAGAAAAGGT 58.208 39.130 20.82 20.82 32.44 3.50
3041 3054 7.067496 TGACTACCCAGATATTGATTTCCTC 57.933 40.000 0.00 0.00 0.00 3.71
3053 3066 8.712228 ATATTGATTTCCTCCAAGGTAATTCC 57.288 34.615 0.22 0.00 35.80 3.01
3057 3070 6.959366 TGATTTCCTCCAAGGTAATTCCAATT 59.041 34.615 0.22 0.00 35.80 2.32
3129 3142 9.871238 TCTACATAGGTTGAAACAAGATCTAAC 57.129 33.333 0.00 0.00 0.00 2.34
3145 3158 8.499162 CAAGATCTAACACATTTTCTCTTCGTT 58.501 33.333 0.00 0.00 0.00 3.85
3189 3202 9.967346 GCAGTACTCAAAGATTACATCTATACA 57.033 33.333 0.00 0.00 39.08 2.29
3206 3219 1.229428 ACACACACAGAAGCGAATGG 58.771 50.000 0.00 0.00 0.00 3.16
3262 3275 6.790232 AAGAGAAATTCTGTTTGACCCAAA 57.210 33.333 0.00 0.00 35.91 3.28
3460 3473 1.944024 CTGTTTGCAACAAGGTACGGA 59.056 47.619 0.00 0.00 41.61 4.69
3474 3487 2.925563 GGTACGGATTCAACAACTACGG 59.074 50.000 0.00 0.00 0.00 4.02
3499 3512 4.665009 TGCCCTAGATGTTTCCAGGAATAT 59.335 41.667 1.58 0.74 0.00 1.28
3504 3517 7.946776 CCCTAGATGTTTCCAGGAATATGAAAT 59.053 37.037 1.58 0.00 31.35 2.17
3516 3529 5.048921 AGGAATATGAAATGCTCGCAATCAG 60.049 40.000 13.60 0.00 32.25 2.90
3525 3538 0.461548 CTCGCAATCAGCACCTCCTA 59.538 55.000 0.00 0.00 46.13 2.94
3582 3595 2.607635 GGTAGTACATCCAATGCGTGTG 59.392 50.000 2.06 0.00 0.00 3.82
3590 3603 0.383590 CCAATGCGTGTGAACCACAA 59.616 50.000 0.95 0.00 46.28 3.33
3639 3652 1.409064 CCGCTATAACAGACAGCCTGA 59.591 52.381 0.00 0.00 45.78 3.86
3697 3710 5.826643 ACCAAGCAAATTATTCACCTCCTA 58.173 37.500 0.00 0.00 0.00 2.94
3761 3774 5.626142 TGTAAGGAATTCAGGTAGCAACAA 58.374 37.500 7.93 0.00 0.00 2.83
3765 3778 4.946157 AGGAATTCAGGTAGCAACAATCAG 59.054 41.667 7.93 0.00 0.00 2.90
3786 3799 1.040646 TCCTCTATAGCAACAGCCCG 58.959 55.000 0.00 0.00 0.00 6.13
3793 3806 1.550130 TAGCAACAGCCCGCTTAGGT 61.550 55.000 0.00 0.00 39.70 3.08
3794 3807 2.690778 GCAACAGCCCGCTTAGGTG 61.691 63.158 0.00 0.00 38.74 4.00
3832 3845 2.712057 AAAAGCAGCCAACAGATTCG 57.288 45.000 0.00 0.00 0.00 3.34
3834 3847 0.250901 AAGCAGCCAACAGATTCGGT 60.251 50.000 0.00 0.00 0.00 4.69
3837 3850 1.943968 GCAGCCAACAGATTCGGTACA 60.944 52.381 0.00 0.00 0.00 2.90
3840 3853 1.338769 GCCAACAGATTCGGTACACCT 60.339 52.381 0.00 0.00 0.00 4.00
3867 3880 4.202264 CCAGACCCTATCATGTACCAAGTC 60.202 50.000 0.00 0.00 0.00 3.01
3870 3883 3.711704 ACCCTATCATGTACCAAGTCCTG 59.288 47.826 0.00 0.00 0.00 3.86
3919 3932 1.598601 GAGATAAAGCAGCAGCAGAGC 59.401 52.381 3.17 0.00 45.49 4.09
3928 3941 3.054503 CAGCAGAGCAGCCACCAC 61.055 66.667 0.00 0.00 34.23 4.16
3952 3965 3.750130 GCAGAACTTCTCTTCAGCATCAA 59.250 43.478 0.00 0.00 33.90 2.57
3962 3975 5.047590 TCTCTTCAGCATCAAAATTGCACAT 60.048 36.000 0.00 0.00 42.62 3.21
3982 3995 4.393062 ACATAACAACTCAGCTCAATTCGG 59.607 41.667 0.00 0.00 0.00 4.30
4085 4098 7.754924 CAGGTGAAAATGTTATGTACATGGTTC 59.245 37.037 18.81 11.73 46.75 3.62
4103 4116 8.352942 ACATGGTTCTGTATTCTTTTTCTGTTC 58.647 33.333 0.00 0.00 0.00 3.18
4138 4151 4.889409 CCACCATGCTTCATTACTACCAAT 59.111 41.667 0.00 0.00 0.00 3.16
4356 4369 1.865865 ATTGTCCATATCGTCGGCAC 58.134 50.000 0.00 0.00 0.00 5.01
4361 4374 1.067060 TCCATATCGTCGGCACAGAAG 59.933 52.381 0.00 0.00 0.00 2.85
4397 4410 9.892130 TTTTTCTTCTTCTATCCTATCTTGGTC 57.108 33.333 0.00 0.00 0.00 4.02
4632 4679 7.483059 CGAGCAAATCATTCTAAAGAGAAAACC 59.517 37.037 0.00 0.00 44.85 3.27
4634 4681 7.174946 AGCAAATCATTCTAAAGAGAAAACCGA 59.825 33.333 0.00 0.00 44.85 4.69
4755 4802 5.156355 CAAACAGTGGATTGTAATCACTGC 58.844 41.667 22.54 7.45 42.12 4.40
4774 4821 3.020274 TGCTAACTTTGACAGTGGCAAA 58.980 40.909 22.64 22.64 40.17 3.68
4792 4839 9.807649 AGTGGCAAATTCTTTGATATAATGAAC 57.192 29.630 3.87 0.00 43.26 3.18
4823 4870 6.098124 TGGATCTGGAAACAACAAATTCACTT 59.902 34.615 0.00 0.00 42.06 3.16
4921 4968 9.673454 AACATAAAAGAATTTGACTACCGTTTC 57.327 29.630 0.00 0.00 39.02 2.78
4935 4982 1.010419 CGTTTCGTTCCAGTACCCCG 61.010 60.000 0.00 0.00 0.00 5.73
5004 5051 8.629158 TCTGTGCACTGTACTTCAAATTAATTT 58.371 29.630 19.41 7.64 0.00 1.82
5184 5233 7.042523 GCTGCCCATGTAAATAATTTGTTGATC 60.043 37.037 0.00 0.00 0.00 2.92
5410 5460 1.717194 TCACGTTAGTTCCGCCATTC 58.283 50.000 0.00 0.00 0.00 2.67
5567 5619 4.452455 CCGGCTATTCAGGTGAATCAATAC 59.548 45.833 8.49 0.00 43.17 1.89
5577 5629 6.818644 TCAGGTGAATCAATACTCAGCTTAAC 59.181 38.462 1.24 0.00 45.63 2.01
5654 5706 7.923878 TCCATTTTACTTTTTGCTCTACCAAAC 59.076 33.333 0.00 0.00 34.68 2.93
5662 5714 3.746045 TGCTCTACCAAACGAGAACTT 57.254 42.857 0.00 0.00 0.00 2.66
5682 5734 6.038997 ACTTATTTCCTTCTCGTGCTACTT 57.961 37.500 0.00 0.00 0.00 2.24
5997 6055 1.645704 TAGGAGTGCTCGCTGACGTC 61.646 60.000 9.11 9.11 41.18 4.34
6031 6089 5.751509 GCTACAACCAAACGAAAGGAATTTT 59.248 36.000 0.00 0.00 0.00 1.82
6079 6188 0.886490 ACAGCGAAACAGAAGGGCAG 60.886 55.000 0.00 0.00 0.00 4.85
6209 6319 3.978164 GGCACCTCAGCTCCCTAT 58.022 61.111 0.00 0.00 34.17 2.57
6210 6320 3.149436 GGCACCTCAGCTCCCTATA 57.851 57.895 0.00 0.00 34.17 1.31
6211 6321 1.424638 GGCACCTCAGCTCCCTATAA 58.575 55.000 0.00 0.00 34.17 0.98
6212 6322 1.070914 GGCACCTCAGCTCCCTATAAC 59.929 57.143 0.00 0.00 34.17 1.89
6213 6323 1.070914 GCACCTCAGCTCCCTATAACC 59.929 57.143 0.00 0.00 0.00 2.85
6214 6324 2.683768 CACCTCAGCTCCCTATAACCT 58.316 52.381 0.00 0.00 0.00 3.50
6215 6325 2.366916 CACCTCAGCTCCCTATAACCTG 59.633 54.545 0.00 0.00 0.00 4.00
6216 6326 1.974236 CCTCAGCTCCCTATAACCTGG 59.026 57.143 0.00 0.00 0.00 4.45
6217 6327 1.346068 CTCAGCTCCCTATAACCTGGC 59.654 57.143 0.00 0.00 0.00 4.85
6218 6328 1.062121 TCAGCTCCCTATAACCTGGCT 60.062 52.381 0.00 0.00 0.00 4.75
6219 6329 1.071385 CAGCTCCCTATAACCTGGCTG 59.929 57.143 0.00 0.00 39.38 4.85
6220 6330 0.398318 GCTCCCTATAACCTGGCTGG 59.602 60.000 9.11 9.11 42.93 4.85
6221 6331 1.059913 CTCCCTATAACCTGGCTGGG 58.940 60.000 15.36 5.47 41.11 4.45
6222 6332 0.345502 TCCCTATAACCTGGCTGGGT 59.654 55.000 15.36 11.07 42.05 4.51
6223 6333 0.474184 CCCTATAACCTGGCTGGGTG 59.526 60.000 11.73 0.00 39.85 4.61
6224 6334 0.179018 CCTATAACCTGGCTGGGTGC 60.179 60.000 11.73 0.00 39.85 5.01
6233 6343 2.282180 GCTGGGTGCCTTTTCCGA 60.282 61.111 0.00 0.00 35.15 4.55
6234 6344 2.626780 GCTGGGTGCCTTTTCCGAC 61.627 63.158 0.00 0.00 35.15 4.79
6235 6345 2.281208 TGGGTGCCTTTTCCGACG 60.281 61.111 0.00 0.00 0.00 5.12
6236 6346 3.053896 GGGTGCCTTTTCCGACGG 61.054 66.667 7.84 7.84 0.00 4.79
6237 6347 2.281276 GGTGCCTTTTCCGACGGT 60.281 61.111 14.79 0.00 0.00 4.83
6238 6348 1.895231 GGTGCCTTTTCCGACGGTT 60.895 57.895 14.79 0.00 0.00 4.44
6239 6349 1.449726 GGTGCCTTTTCCGACGGTTT 61.450 55.000 14.79 0.00 0.00 3.27
6240 6350 0.382873 GTGCCTTTTCCGACGGTTTT 59.617 50.000 14.79 0.00 0.00 2.43
6241 6351 1.603326 GTGCCTTTTCCGACGGTTTTA 59.397 47.619 14.79 0.00 0.00 1.52
6242 6352 1.603326 TGCCTTTTCCGACGGTTTTAC 59.397 47.619 14.79 1.35 0.00 2.01
6243 6353 1.603326 GCCTTTTCCGACGGTTTTACA 59.397 47.619 14.79 0.00 0.00 2.41
6244 6354 2.350102 GCCTTTTCCGACGGTTTTACAG 60.350 50.000 14.79 2.90 0.00 2.74
6245 6355 2.224784 CCTTTTCCGACGGTTTTACAGG 59.775 50.000 14.79 8.15 0.00 4.00
6246 6356 1.881591 TTTCCGACGGTTTTACAGGG 58.118 50.000 14.79 0.00 0.00 4.45
6247 6357 0.603439 TTCCGACGGTTTTACAGGGC 60.603 55.000 14.79 0.00 0.00 5.19
6248 6358 2.385091 CCGACGGTTTTACAGGGCG 61.385 63.158 5.48 0.00 0.00 6.13
6249 6359 2.385091 CGACGGTTTTACAGGGCGG 61.385 63.158 0.00 0.00 0.00 6.13
6250 6360 1.004679 GACGGTTTTACAGGGCGGA 60.005 57.895 0.00 0.00 0.00 5.54
6251 6361 1.293963 GACGGTTTTACAGGGCGGAC 61.294 60.000 0.00 0.00 0.00 4.79
6252 6362 1.301874 CGGTTTTACAGGGCGGACA 60.302 57.895 0.00 0.00 0.00 4.02
6253 6363 0.885596 CGGTTTTACAGGGCGGACAA 60.886 55.000 0.00 0.00 0.00 3.18
6254 6364 1.320507 GGTTTTACAGGGCGGACAAA 58.679 50.000 0.00 0.00 0.00 2.83
6255 6365 1.682323 GGTTTTACAGGGCGGACAAAA 59.318 47.619 0.00 0.00 0.00 2.44
6256 6366 2.101082 GGTTTTACAGGGCGGACAAAAA 59.899 45.455 0.00 0.00 0.00 1.94
6278 6388 4.881019 AAATAGCCTGAGCAGATATCGT 57.119 40.909 0.00 0.00 43.56 3.73
6279 6389 5.984695 AAATAGCCTGAGCAGATATCGTA 57.015 39.130 0.00 0.00 43.56 3.43
6280 6390 5.984695 AATAGCCTGAGCAGATATCGTAA 57.015 39.130 0.00 0.00 43.56 3.18
6281 6391 5.984695 ATAGCCTGAGCAGATATCGTAAA 57.015 39.130 0.00 0.00 43.56 2.01
6282 6392 4.672587 AGCCTGAGCAGATATCGTAAAA 57.327 40.909 0.00 0.00 43.56 1.52
6283 6393 5.023533 AGCCTGAGCAGATATCGTAAAAA 57.976 39.130 0.00 0.00 43.56 1.94
6284 6394 4.811557 AGCCTGAGCAGATATCGTAAAAAC 59.188 41.667 0.00 0.00 43.56 2.43
6285 6395 4.318121 GCCTGAGCAGATATCGTAAAAACG 60.318 45.833 0.00 0.00 39.53 3.60
6286 6396 4.209288 CCTGAGCAGATATCGTAAAAACGG 59.791 45.833 0.00 0.00 0.00 4.44
6287 6397 3.554324 TGAGCAGATATCGTAAAAACGGC 59.446 43.478 0.00 0.00 0.00 5.68
6288 6398 2.870411 AGCAGATATCGTAAAAACGGCC 59.130 45.455 0.00 0.00 0.00 6.13
6289 6399 2.032290 GCAGATATCGTAAAAACGGCCC 60.032 50.000 0.00 0.00 0.00 5.80
6290 6400 2.220133 CAGATATCGTAAAAACGGCCCG 59.780 50.000 0.00 0.00 0.00 6.13
6291 6401 1.528161 GATATCGTAAAAACGGCCCGG 59.472 52.381 8.57 0.00 0.00 5.73
6292 6402 1.088910 TATCGTAAAAACGGCCCGGC 61.089 55.000 8.57 0.00 0.00 6.13
6293 6403 2.808181 ATCGTAAAAACGGCCCGGCT 62.808 55.000 8.57 0.00 0.00 5.52
6294 6404 2.872557 GTAAAAACGGCCCGGCTC 59.127 61.111 8.57 0.00 0.00 4.70
6295 6405 2.743149 TAAAAACGGCCCGGCTCG 60.743 61.111 8.57 13.57 0.00 5.03
6296 6406 3.534054 TAAAAACGGCCCGGCTCGT 62.534 57.895 17.12 17.12 37.13 4.18
6297 6407 2.164865 TAAAAACGGCCCGGCTCGTA 62.165 55.000 21.37 7.64 35.28 3.43
6298 6408 3.534054 AAAACGGCCCGGCTCGTAA 62.534 57.895 21.37 0.00 35.28 3.18
6299 6409 3.534054 AAACGGCCCGGCTCGTAAA 62.534 57.895 21.37 0.00 35.28 2.01
6300 6410 3.534054 AACGGCCCGGCTCGTAAAA 62.534 57.895 21.37 0.00 35.28 1.52
6301 6411 3.493440 CGGCCCGGCTCGTAAAAC 61.493 66.667 9.86 0.00 0.00 2.43
6302 6412 2.358984 GGCCCGGCTCGTAAAACA 60.359 61.111 9.86 0.00 0.00 2.83
6303 6413 1.747745 GGCCCGGCTCGTAAAACAT 60.748 57.895 9.86 0.00 0.00 2.71
6304 6414 1.310216 GGCCCGGCTCGTAAAACATT 61.310 55.000 9.86 0.00 0.00 2.71
6305 6415 0.524414 GCCCGGCTCGTAAAACATTT 59.476 50.000 0.71 0.00 0.00 2.32
6306 6416 1.731098 GCCCGGCTCGTAAAACATTTG 60.731 52.381 0.71 0.00 0.00 2.32
6307 6417 1.538075 CCCGGCTCGTAAAACATTTGT 59.462 47.619 0.00 0.00 0.00 2.83
6308 6418 2.580589 CCGGCTCGTAAAACATTTGTG 58.419 47.619 0.00 0.00 0.00 3.33
6309 6419 2.580589 CGGCTCGTAAAACATTTGTGG 58.419 47.619 0.00 0.00 0.00 4.17
6310 6420 2.667171 CGGCTCGTAAAACATTTGTGGG 60.667 50.000 0.00 0.00 0.00 4.61
6311 6421 2.554893 GGCTCGTAAAACATTTGTGGGA 59.445 45.455 0.00 0.00 0.00 4.37
6312 6422 3.561503 GCTCGTAAAACATTTGTGGGAC 58.438 45.455 0.00 0.00 0.00 4.46
6313 6423 3.805823 CTCGTAAAACATTTGTGGGACG 58.194 45.455 5.60 5.60 0.00 4.79
6314 6424 2.031857 TCGTAAAACATTTGTGGGACGC 60.032 45.455 6.64 0.00 40.62 5.19
6324 6434 2.506065 GTGGGACGCATCTCTACCT 58.494 57.895 0.00 0.00 39.55 3.08
6325 6435 0.103208 GTGGGACGCATCTCTACCTG 59.897 60.000 0.00 0.00 39.55 4.00
6326 6436 0.033503 TGGGACGCATCTCTACCTGA 60.034 55.000 0.00 0.00 0.00 3.86
6327 6437 0.386113 GGGACGCATCTCTACCTGAC 59.614 60.000 0.00 0.00 0.00 3.51
6328 6438 0.386113 GGACGCATCTCTACCTGACC 59.614 60.000 0.00 0.00 0.00 4.02
6329 6439 0.386113 GACGCATCTCTACCTGACCC 59.614 60.000 0.00 0.00 0.00 4.46
6330 6440 0.324368 ACGCATCTCTACCTGACCCA 60.324 55.000 0.00 0.00 0.00 4.51
6331 6441 0.387202 CGCATCTCTACCTGACCCAG 59.613 60.000 0.00 0.00 0.00 4.45
6332 6442 0.105778 GCATCTCTACCTGACCCAGC 59.894 60.000 0.00 0.00 0.00 4.85
6333 6443 1.489481 CATCTCTACCTGACCCAGCA 58.511 55.000 0.00 0.00 0.00 4.41
6334 6444 1.833630 CATCTCTACCTGACCCAGCAA 59.166 52.381 0.00 0.00 0.00 3.91
6335 6445 2.254152 TCTCTACCTGACCCAGCAAT 57.746 50.000 0.00 0.00 0.00 3.56
6336 6446 2.111384 TCTCTACCTGACCCAGCAATC 58.889 52.381 0.00 0.00 0.00 2.67
6337 6447 1.833630 CTCTACCTGACCCAGCAATCA 59.166 52.381 0.00 0.00 0.00 2.57
6338 6448 1.833630 TCTACCTGACCCAGCAATCAG 59.166 52.381 0.00 0.00 41.75 2.90
6342 6452 2.431954 CTGACCCAGCAATCAGGATT 57.568 50.000 0.00 0.00 38.97 3.01
6343 6453 2.295885 CTGACCCAGCAATCAGGATTC 58.704 52.381 0.00 0.00 38.97 2.52
6344 6454 1.918262 TGACCCAGCAATCAGGATTCT 59.082 47.619 0.00 0.00 0.00 2.40
6345 6455 2.309755 TGACCCAGCAATCAGGATTCTT 59.690 45.455 0.00 0.00 0.00 2.52
6346 6456 2.948315 GACCCAGCAATCAGGATTCTTC 59.052 50.000 0.00 0.00 0.00 2.87
6347 6457 2.305009 CCCAGCAATCAGGATTCTTCC 58.695 52.381 0.00 0.00 42.96 3.46
6359 6469 3.344515 GGATTCTTCCTAACACACCACC 58.655 50.000 0.00 0.00 39.14 4.61
6360 6470 3.244770 GGATTCTTCCTAACACACCACCA 60.245 47.826 0.00 0.00 39.14 4.17
6361 6471 4.567747 GGATTCTTCCTAACACACCACCAT 60.568 45.833 0.00 0.00 39.14 3.55
6362 6472 3.417069 TCTTCCTAACACACCACCATG 57.583 47.619 0.00 0.00 0.00 3.66
6363 6473 1.812571 CTTCCTAACACACCACCATGC 59.187 52.381 0.00 0.00 0.00 4.06
6364 6474 0.037590 TCCTAACACACCACCATGCC 59.962 55.000 0.00 0.00 0.00 4.40
6365 6475 0.038166 CCTAACACACCACCATGCCT 59.962 55.000 0.00 0.00 0.00 4.75
6366 6476 1.453155 CTAACACACCACCATGCCTC 58.547 55.000 0.00 0.00 0.00 4.70
6367 6477 0.037590 TAACACACCACCATGCCTCC 59.962 55.000 0.00 0.00 0.00 4.30
6368 6478 1.719063 AACACACCACCATGCCTCCT 61.719 55.000 0.00 0.00 0.00 3.69
6369 6479 1.377725 CACACCACCATGCCTCCTC 60.378 63.158 0.00 0.00 0.00 3.71
6370 6480 2.273449 CACCACCATGCCTCCTCC 59.727 66.667 0.00 0.00 0.00 4.30
6371 6481 3.017581 ACCACCATGCCTCCTCCC 61.018 66.667 0.00 0.00 0.00 4.30
6372 6482 3.813724 CCACCATGCCTCCTCCCC 61.814 72.222 0.00 0.00 0.00 4.81
6373 6483 3.016971 CACCATGCCTCCTCCCCA 61.017 66.667 0.00 0.00 0.00 4.96
6374 6484 2.693864 ACCATGCCTCCTCCCCAG 60.694 66.667 0.00 0.00 0.00 4.45
6375 6485 4.201122 CCATGCCTCCTCCCCAGC 62.201 72.222 0.00 0.00 0.00 4.85
6376 6486 4.559063 CATGCCTCCTCCCCAGCG 62.559 72.222 0.00 0.00 0.00 5.18
6384 6494 3.801997 CTCCCCAGCGCCTCCATT 61.802 66.667 2.29 0.00 0.00 3.16
6385 6495 3.338250 TCCCCAGCGCCTCCATTT 61.338 61.111 2.29 0.00 0.00 2.32
6386 6496 1.983119 CTCCCCAGCGCCTCCATTTA 61.983 60.000 2.29 0.00 0.00 1.40
6387 6497 1.526917 CCCCAGCGCCTCCATTTAG 60.527 63.158 2.29 0.00 0.00 1.85
6388 6498 2.189499 CCCAGCGCCTCCATTTAGC 61.189 63.158 2.29 0.00 0.00 3.09
6389 6499 1.451927 CCAGCGCCTCCATTTAGCA 60.452 57.895 2.29 0.00 0.00 3.49
6390 6500 0.820891 CCAGCGCCTCCATTTAGCAT 60.821 55.000 2.29 0.00 0.00 3.79
6391 6501 0.309922 CAGCGCCTCCATTTAGCATG 59.690 55.000 2.29 0.00 0.00 4.06
6392 6502 0.820891 AGCGCCTCCATTTAGCATGG 60.821 55.000 2.29 0.00 40.48 3.66
6393 6503 0.819259 GCGCCTCCATTTAGCATGGA 60.819 55.000 0.00 4.33 45.24 3.41
6394 6504 1.901591 CGCCTCCATTTAGCATGGAT 58.098 50.000 4.80 0.00 46.12 3.41
6395 6505 2.875672 GCGCCTCCATTTAGCATGGATA 60.876 50.000 4.80 0.00 46.12 2.59
6396 6506 3.411446 CGCCTCCATTTAGCATGGATAA 58.589 45.455 4.80 0.00 46.12 1.75
6397 6507 3.438087 CGCCTCCATTTAGCATGGATAAG 59.562 47.826 4.80 0.00 46.12 1.73
6398 6508 4.401925 GCCTCCATTTAGCATGGATAAGT 58.598 43.478 4.80 0.00 46.12 2.24
6399 6509 5.560724 GCCTCCATTTAGCATGGATAAGTA 58.439 41.667 4.80 0.00 46.12 2.24
6400 6510 5.645497 GCCTCCATTTAGCATGGATAAGTAG 59.355 44.000 4.80 0.00 46.12 2.57
6401 6511 6.176183 CCTCCATTTAGCATGGATAAGTAGG 58.824 44.000 4.80 0.00 46.12 3.18
6402 6512 6.013379 CCTCCATTTAGCATGGATAAGTAGGA 60.013 42.308 4.80 0.00 46.12 2.94
6403 6513 7.387265 TCCATTTAGCATGGATAAGTAGGAA 57.613 36.000 0.16 0.00 42.81 3.36
6404 6514 7.811282 TCCATTTAGCATGGATAAGTAGGAAA 58.189 34.615 0.16 0.00 42.81 3.13
6405 6515 8.448008 TCCATTTAGCATGGATAAGTAGGAAAT 58.552 33.333 0.16 0.00 42.81 2.17
6406 6516 9.739276 CCATTTAGCATGGATAAGTAGGAAATA 57.261 33.333 0.00 0.00 41.64 1.40
6409 6519 9.778741 TTTAGCATGGATAAGTAGGAAATACAG 57.221 33.333 0.00 0.00 36.79 2.74
6410 6520 7.380423 AGCATGGATAAGTAGGAAATACAGT 57.620 36.000 0.00 0.00 36.79 3.55
6411 6521 8.492415 AGCATGGATAAGTAGGAAATACAGTA 57.508 34.615 0.00 0.00 36.79 2.74
6412 6522 8.934697 AGCATGGATAAGTAGGAAATACAGTAA 58.065 33.333 0.00 0.00 36.79 2.24
6413 6523 9.209175 GCATGGATAAGTAGGAAATACAGTAAG 57.791 37.037 0.00 0.00 36.79 2.34
6423 6533 9.880157 GTAGGAAATACAGTAAGTTATTGGACA 57.120 33.333 9.87 0.00 34.26 4.02
6440 6550 9.970395 TTATTGGACATATGAAGATTCAAATGC 57.030 29.630 10.38 0.00 41.13 3.56
6441 6551 7.407393 TTGGACATATGAAGATTCAAATGCA 57.593 32.000 10.38 0.00 41.13 3.96
6442 6552 7.591421 TGGACATATGAAGATTCAAATGCAT 57.409 32.000 10.38 0.00 41.13 3.96
6443 6553 7.430441 TGGACATATGAAGATTCAAATGCATG 58.570 34.615 10.38 0.00 41.13 4.06
6444 6554 7.068962 TGGACATATGAAGATTCAAATGCATGT 59.931 33.333 10.38 0.00 41.13 3.21
6445 6555 7.924412 GGACATATGAAGATTCAAATGCATGTT 59.076 33.333 10.38 0.00 41.13 2.71
6446 6556 8.867112 ACATATGAAGATTCAAATGCATGTTC 57.133 30.769 10.38 0.00 41.13 3.18
6447 6557 7.646526 ACATATGAAGATTCAAATGCATGTTCG 59.353 33.333 10.38 0.00 41.13 3.95
6448 6558 4.735985 TGAAGATTCAAATGCATGTTCGG 58.264 39.130 0.00 0.00 33.55 4.30
6449 6559 4.218200 TGAAGATTCAAATGCATGTTCGGT 59.782 37.500 0.00 0.00 33.55 4.69
6450 6560 4.361451 AGATTCAAATGCATGTTCGGTC 57.639 40.909 0.00 0.00 0.00 4.79
6451 6561 3.129287 AGATTCAAATGCATGTTCGGTCC 59.871 43.478 0.00 0.00 0.00 4.46
6452 6562 1.902938 TCAAATGCATGTTCGGTCCA 58.097 45.000 0.00 0.00 0.00 4.02
6453 6563 2.234143 TCAAATGCATGTTCGGTCCAA 58.766 42.857 0.00 0.00 0.00 3.53
6454 6564 2.030363 TCAAATGCATGTTCGGTCCAAC 60.030 45.455 0.00 0.00 0.00 3.77
6455 6565 0.521291 AATGCATGTTCGGTCCAACG 59.479 50.000 0.00 0.00 0.00 4.10
6456 6566 1.305219 ATGCATGTTCGGTCCAACGG 61.305 55.000 0.00 0.00 0.00 4.44
6457 6567 1.964373 GCATGTTCGGTCCAACGGT 60.964 57.895 0.00 0.00 0.00 4.83
6458 6568 1.866237 CATGTTCGGTCCAACGGTG 59.134 57.895 0.00 0.00 0.00 4.94
6459 6569 0.882927 CATGTTCGGTCCAACGGTGT 60.883 55.000 0.00 0.00 0.00 4.16
6460 6570 0.882927 ATGTTCGGTCCAACGGTGTG 60.883 55.000 0.00 0.00 0.00 3.82
6461 6571 1.227321 GTTCGGTCCAACGGTGTGA 60.227 57.895 0.00 0.00 0.00 3.58
6462 6572 0.810823 GTTCGGTCCAACGGTGTGAA 60.811 55.000 0.00 0.00 0.00 3.18
6463 6573 0.107800 TTCGGTCCAACGGTGTGAAA 60.108 50.000 0.00 0.00 0.00 2.69
6464 6574 0.107800 TCGGTCCAACGGTGTGAAAA 60.108 50.000 0.00 0.00 0.00 2.29
6465 6575 0.948678 CGGTCCAACGGTGTGAAAAT 59.051 50.000 0.00 0.00 0.00 1.82
6466 6576 1.334599 CGGTCCAACGGTGTGAAAATG 60.335 52.381 0.00 0.00 0.00 2.32
6467 6577 1.679153 GGTCCAACGGTGTGAAAATGT 59.321 47.619 0.00 0.00 0.00 2.71
6468 6578 2.879646 GGTCCAACGGTGTGAAAATGTA 59.120 45.455 0.00 0.00 0.00 2.29
6469 6579 3.315749 GGTCCAACGGTGTGAAAATGTAA 59.684 43.478 0.00 0.00 0.00 2.41
6470 6580 4.284485 GTCCAACGGTGTGAAAATGTAAC 58.716 43.478 0.00 0.00 0.00 2.50
6471 6581 4.035909 GTCCAACGGTGTGAAAATGTAACT 59.964 41.667 0.00 0.00 0.00 2.24
6472 6582 4.641094 TCCAACGGTGTGAAAATGTAACTT 59.359 37.500 0.00 0.00 0.00 2.66
6473 6583 5.125739 TCCAACGGTGTGAAAATGTAACTTT 59.874 36.000 0.00 0.00 0.00 2.66
6474 6584 6.318144 TCCAACGGTGTGAAAATGTAACTTTA 59.682 34.615 0.00 0.00 0.00 1.85
6475 6585 7.013464 TCCAACGGTGTGAAAATGTAACTTTAT 59.987 33.333 0.00 0.00 0.00 1.40
6476 6586 7.325097 CCAACGGTGTGAAAATGTAACTTTATC 59.675 37.037 0.00 0.00 0.00 1.75
6477 6587 7.739498 ACGGTGTGAAAATGTAACTTTATCT 57.261 32.000 0.00 0.00 0.00 1.98
6478 6588 8.161699 ACGGTGTGAAAATGTAACTTTATCTT 57.838 30.769 0.00 0.00 0.00 2.40
6479 6589 8.626526 ACGGTGTGAAAATGTAACTTTATCTTT 58.373 29.630 0.00 0.00 0.00 2.52
6495 6605 9.466497 ACTTTATCTTTAGCAAATCATTCCAGA 57.534 29.630 0.00 0.00 0.00 3.86
6503 6613 9.866655 TTTAGCAAATCATTCCAGATTATAGGT 57.133 29.630 0.00 0.00 37.24 3.08
6504 6614 7.992754 AGCAAATCATTCCAGATTATAGGTC 57.007 36.000 0.00 0.00 37.24 3.85
6505 6615 6.944862 AGCAAATCATTCCAGATTATAGGTCC 59.055 38.462 0.00 0.00 37.24 4.46
6506 6616 6.151817 GCAAATCATTCCAGATTATAGGTCCC 59.848 42.308 0.00 0.00 37.24 4.46
6507 6617 7.465116 CAAATCATTCCAGATTATAGGTCCCT 58.535 38.462 0.00 0.00 37.24 4.20
6508 6618 6.882768 ATCATTCCAGATTATAGGTCCCTC 57.117 41.667 0.00 0.00 0.00 4.30
6509 6619 5.982391 TCATTCCAGATTATAGGTCCCTCT 58.018 41.667 0.00 0.00 0.00 3.69
6510 6620 6.019748 TCATTCCAGATTATAGGTCCCTCTC 58.980 44.000 0.00 0.00 0.00 3.20
6511 6621 4.405756 TCCAGATTATAGGTCCCTCTCC 57.594 50.000 0.00 0.00 0.00 3.71
6512 6622 3.732742 TCCAGATTATAGGTCCCTCTCCA 59.267 47.826 0.00 0.00 0.00 3.86
6513 6623 4.172041 TCCAGATTATAGGTCCCTCTCCAA 59.828 45.833 0.00 0.00 0.00 3.53
6514 6624 5.097234 CCAGATTATAGGTCCCTCTCCAAT 58.903 45.833 0.00 0.00 0.00 3.16
6515 6625 5.188751 CCAGATTATAGGTCCCTCTCCAATC 59.811 48.000 0.00 0.00 0.00 2.67
6516 6626 5.782331 CAGATTATAGGTCCCTCTCCAATCA 59.218 44.000 0.00 0.00 0.00 2.57
6517 6627 6.270927 CAGATTATAGGTCCCTCTCCAATCAA 59.729 42.308 0.00 0.00 0.00 2.57
6518 6628 7.028131 AGATTATAGGTCCCTCTCCAATCAAT 58.972 38.462 0.00 0.00 0.00 2.57
6519 6629 6.688073 TTATAGGTCCCTCTCCAATCAATC 57.312 41.667 0.00 0.00 0.00 2.67
6520 6630 2.131023 AGGTCCCTCTCCAATCAATCC 58.869 52.381 0.00 0.00 0.00 3.01
6521 6631 2.131023 GGTCCCTCTCCAATCAATCCT 58.869 52.381 0.00 0.00 0.00 3.24
6522 6632 2.105649 GGTCCCTCTCCAATCAATCCTC 59.894 54.545 0.00 0.00 0.00 3.71
6523 6633 3.044894 GTCCCTCTCCAATCAATCCTCT 58.955 50.000 0.00 0.00 0.00 3.69
6524 6634 3.044156 TCCCTCTCCAATCAATCCTCTG 58.956 50.000 0.00 0.00 0.00 3.35
6525 6635 3.044156 CCCTCTCCAATCAATCCTCTGA 58.956 50.000 0.00 0.00 0.00 3.27
6526 6636 3.457380 CCCTCTCCAATCAATCCTCTGAA 59.543 47.826 0.00 0.00 0.00 3.02
6527 6637 4.104420 CCCTCTCCAATCAATCCTCTGAAT 59.896 45.833 0.00 0.00 0.00 2.57
6528 6638 5.309020 CCCTCTCCAATCAATCCTCTGAATA 59.691 44.000 0.00 0.00 0.00 1.75
6529 6639 6.012683 CCCTCTCCAATCAATCCTCTGAATAT 60.013 42.308 0.00 0.00 0.00 1.28
6530 6640 6.879993 CCTCTCCAATCAATCCTCTGAATATG 59.120 42.308 0.00 0.00 0.00 1.78
6531 6641 7.384524 TCTCCAATCAATCCTCTGAATATGT 57.615 36.000 0.00 0.00 0.00 2.29
6532 6642 7.809238 TCTCCAATCAATCCTCTGAATATGTT 58.191 34.615 0.00 0.00 0.00 2.71
6533 6643 7.935755 TCTCCAATCAATCCTCTGAATATGTTC 59.064 37.037 0.00 0.00 34.85 3.18
6534 6644 7.809238 TCCAATCAATCCTCTGAATATGTTCT 58.191 34.615 3.72 0.00 35.33 3.01
6535 6645 8.277197 TCCAATCAATCCTCTGAATATGTTCTT 58.723 33.333 3.72 0.00 35.33 2.52
6536 6646 8.566260 CCAATCAATCCTCTGAATATGTTCTTC 58.434 37.037 3.72 0.00 35.33 2.87
6537 6647 9.339850 CAATCAATCCTCTGAATATGTTCTTCT 57.660 33.333 3.72 0.00 35.33 2.85
6545 6655 9.482627 CCTCTGAATATGTTCTTCTAATGTACC 57.517 37.037 3.72 0.00 35.33 3.34
6549 6659 9.778741 TGAATATGTTCTTCTAATGTACCATCC 57.221 33.333 3.72 0.00 35.33 3.51
6550 6660 9.778741 GAATATGTTCTTCTAATGTACCATCCA 57.221 33.333 0.00 0.00 0.00 3.41
6554 6664 9.784531 ATGTTCTTCTAATGTACCATCCAATAG 57.215 33.333 0.00 0.00 0.00 1.73
6555 6665 8.210946 TGTTCTTCTAATGTACCATCCAATAGG 58.789 37.037 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.939106 GGTGTGCACAAATCCAACGC 60.939 55.000 23.59 5.36 0.00 4.84
67 68 2.102553 GGACTACCGCTCGACAGC 59.897 66.667 0.00 0.00 42.96 4.40
83 85 2.578713 CGGTCGACGGATCAACGG 60.579 66.667 17.47 0.00 39.42 4.44
100 102 1.160329 AACAGAGCTTCCACGCACAC 61.160 55.000 0.00 0.00 0.00 3.82
116 118 0.759959 TACACGCAGGGGAAGAAACA 59.240 50.000 0.00 0.00 0.00 2.83
126 128 1.338107 TCCCCATAGATACACGCAGG 58.662 55.000 0.00 0.00 0.00 4.85
131 133 3.788227 TGGCAATCCCCATAGATACAC 57.212 47.619 0.00 0.00 0.00 2.90
148 150 0.822532 ATGAAGCTAGCTGCCATGGC 60.823 55.000 30.54 30.54 44.23 4.40
154 156 3.802866 AGACCTAAATGAAGCTAGCTGC 58.197 45.455 20.16 18.29 43.29 5.25
211 213 8.428063 ACCTCTCTAAGATGATGTGAAAATAGG 58.572 37.037 0.00 0.00 0.00 2.57
242 244 3.423996 TTGTTGGCCACGTTTAAAGTC 57.576 42.857 3.88 0.00 0.00 3.01
243 245 3.193903 ACTTTGTTGGCCACGTTTAAAGT 59.806 39.130 3.88 14.62 33.50 2.66
244 246 3.776340 ACTTTGTTGGCCACGTTTAAAG 58.224 40.909 3.88 13.98 0.00 1.85
245 247 3.870633 ACTTTGTTGGCCACGTTTAAA 57.129 38.095 3.88 1.83 0.00 1.52
246 248 5.517322 AATACTTTGTTGGCCACGTTTAA 57.483 34.783 3.88 0.00 0.00 1.52
247 249 5.067413 TGAAATACTTTGTTGGCCACGTTTA 59.933 36.000 3.88 0.00 0.00 2.01
248 250 4.142138 TGAAATACTTTGTTGGCCACGTTT 60.142 37.500 3.88 0.00 0.00 3.60
249 251 3.381908 TGAAATACTTTGTTGGCCACGTT 59.618 39.130 3.88 0.00 0.00 3.99
250 252 2.952978 TGAAATACTTTGTTGGCCACGT 59.047 40.909 3.88 0.00 0.00 4.49
251 253 3.634568 TGAAATACTTTGTTGGCCACG 57.365 42.857 3.88 0.00 0.00 4.94
252 254 4.929211 GGAATGAAATACTTTGTTGGCCAC 59.071 41.667 3.88 0.75 0.00 5.01
253 255 4.837860 AGGAATGAAATACTTTGTTGGCCA 59.162 37.500 0.00 0.00 0.00 5.36
254 256 5.405935 AGGAATGAAATACTTTGTTGGCC 57.594 39.130 0.00 0.00 0.00 5.36
255 257 7.728847 AAAAGGAATGAAATACTTTGTTGGC 57.271 32.000 0.00 0.00 34.96 4.52
256 258 9.757227 TGTAAAAGGAATGAAATACTTTGTTGG 57.243 29.630 0.00 0.00 34.96 3.77
262 264 9.860898 GCATCTTGTAAAAGGAATGAAATACTT 57.139 29.630 0.00 0.00 0.00 2.24
263 265 9.247861 AGCATCTTGTAAAAGGAATGAAATACT 57.752 29.630 0.00 0.00 0.00 2.12
266 268 9.466497 TCTAGCATCTTGTAAAAGGAATGAAAT 57.534 29.630 0.00 0.00 0.00 2.17
267 269 8.862325 TCTAGCATCTTGTAAAAGGAATGAAA 57.138 30.769 0.00 0.00 0.00 2.69
268 270 9.466497 AATCTAGCATCTTGTAAAAGGAATGAA 57.534 29.630 0.00 0.00 0.00 2.57
273 275 9.261180 CGAATAATCTAGCATCTTGTAAAAGGA 57.739 33.333 0.00 0.00 0.00 3.36
274 276 9.046296 ACGAATAATCTAGCATCTTGTAAAAGG 57.954 33.333 0.00 0.00 0.00 3.11
276 278 9.817809 AGACGAATAATCTAGCATCTTGTAAAA 57.182 29.630 0.00 0.00 0.00 1.52
277 279 9.464714 GAGACGAATAATCTAGCATCTTGTAAA 57.535 33.333 0.00 0.00 0.00 2.01
278 280 8.082852 GGAGACGAATAATCTAGCATCTTGTAA 58.917 37.037 0.00 0.00 0.00 2.41
279 281 7.309255 GGGAGACGAATAATCTAGCATCTTGTA 60.309 40.741 0.00 0.00 0.00 2.41
322 324 0.693049 GATGGTTGAGGGGTCACAGT 59.307 55.000 0.00 0.00 0.00 3.55
339 341 0.947244 GCCTTGCAAATCGATCGGAT 59.053 50.000 16.41 4.75 36.78 4.18
356 358 1.688884 AGAGAAGAGGAGCCTGGCC 60.689 63.158 16.57 6.85 0.00 5.36
363 365 1.206849 GAGGCCAACAGAGAAGAGGAG 59.793 57.143 5.01 0.00 0.00 3.69
366 368 0.979665 TGGAGGCCAACAGAGAAGAG 59.020 55.000 5.01 0.00 0.00 2.85
377 379 1.344953 ATTGGATAGCGTGGAGGCCA 61.345 55.000 5.01 0.00 0.00 5.36
404 406 3.368427 TCATCACGATGAGGAAACAGTCC 60.368 47.826 5.62 0.00 42.42 3.85
406 408 3.961480 TCATCACGATGAGGAAACAGT 57.039 42.857 5.62 0.00 42.42 3.55
443 446 0.521867 CGAATGCAACTCACATGCCG 60.522 55.000 0.00 0.00 43.16 5.69
468 471 2.704464 TAGTCGCAGTAGTAGAGCCA 57.296 50.000 0.00 0.00 0.00 4.75
552 555 7.859325 AAATGTTTGTGGCTCGTACTATAAT 57.141 32.000 0.00 0.00 0.00 1.28
614 617 8.718047 AGGTTTGTTCGTAAATTCGTAAATTC 57.282 30.769 0.00 0.00 33.93 2.17
616 619 9.763465 CATAGGTTTGTTCGTAAATTCGTAAAT 57.237 29.630 0.00 0.00 0.00 1.40
617 620 8.986847 TCATAGGTTTGTTCGTAAATTCGTAAA 58.013 29.630 0.00 0.00 0.00 2.01
618 621 8.531622 TCATAGGTTTGTTCGTAAATTCGTAA 57.468 30.769 0.00 0.00 0.00 3.18
619 622 8.028354 TCTCATAGGTTTGTTCGTAAATTCGTA 58.972 33.333 0.00 0.00 0.00 3.43
620 623 6.869913 TCTCATAGGTTTGTTCGTAAATTCGT 59.130 34.615 0.00 0.00 0.00 3.85
621 624 7.285783 TCTCATAGGTTTGTTCGTAAATTCG 57.714 36.000 0.00 0.00 0.00 3.34
700 703 6.471233 TGTTCCCAACTCATATCTACAGAG 57.529 41.667 0.00 0.00 35.56 3.35
824 828 2.293399 GTGCGGATTGTCAAAAGAGGTT 59.707 45.455 0.00 0.00 0.00 3.50
1010 1015 3.503748 CAGATGTTGGTTGTTCCTCTTCC 59.496 47.826 0.00 0.00 37.07 3.46
1053 1058 7.397476 ACCTTCTTTCTTTTGGGAGGATTATTC 59.603 37.037 0.00 0.00 0.00 1.75
1104 1111 0.688087 AGTCAGTAGTAGCCCCCTGC 60.688 60.000 0.00 0.00 41.71 4.85
1129 1136 2.712709 TGAAACGGGTGTCAGTGAAAA 58.287 42.857 0.00 0.00 0.00 2.29
1280 1288 8.909708 TCAGACAGAAATTTAACAAACAACTG 57.090 30.769 0.00 0.00 0.00 3.16
1345 1353 1.698165 TTCGTAGCAGTGAAGCGAAG 58.302 50.000 10.51 0.00 40.15 3.79
1348 1356 1.585668 CTGATTCGTAGCAGTGAAGCG 59.414 52.381 0.00 0.00 40.15 4.68
1362 1370 0.109412 GTTGCAGGCACAGCTGATTC 60.109 55.000 23.35 8.73 43.00 2.52
1369 1377 1.542472 TCATCAATGTTGCAGGCACAG 59.458 47.619 0.00 0.00 0.00 3.66
1372 1380 5.601583 AAATATCATCAATGTTGCAGGCA 57.398 34.783 0.00 0.00 0.00 4.75
1389 1397 6.876155 TGTAATGCAAGCCACATGAAAATAT 58.124 32.000 0.00 0.00 0.00 1.28
1441 1449 5.969423 TCAAAATTGAATCCATTCCTCAGC 58.031 37.500 0.00 0.00 35.97 4.26
1590 1598 6.528072 CGTAATCATCGCAATAAGATGCTCTA 59.472 38.462 1.67 0.00 44.21 2.43
1661 1669 3.250521 GGAGCAATCAAGCTTGAGATAGC 59.749 47.826 31.14 27.73 46.75 2.97
1662 1670 4.706035 AGGAGCAATCAAGCTTGAGATAG 58.294 43.478 31.14 21.07 46.75 2.08
1679 1687 1.671328 GGAACCTTTCGCATTAGGAGC 59.329 52.381 0.00 0.00 35.45 4.70
1740 1748 2.231964 CACCAGTTGTATTTGCCAGCAT 59.768 45.455 0.00 0.00 0.00 3.79
1846 1854 6.010219 ACTTACCACCAAGATTAGTTTGCAT 58.990 36.000 0.00 0.00 0.00 3.96
1888 1896 6.825944 AAGGAAGAAAAAGTGATCTTAGGC 57.174 37.500 0.00 0.00 36.08 3.93
1920 1928 8.349983 GTTTAAAAGAAAGAGTTGGATGCAGTA 58.650 33.333 0.00 0.00 0.00 2.74
2143 2153 7.939784 AGAGAAGGTAAAGAGTTTTTGTTGT 57.060 32.000 0.00 0.00 0.00 3.32
2214 2225 6.210784 ACCTACGCAGAATACATATATGTGGT 59.789 38.462 25.48 17.04 41.89 4.16
2232 2243 3.844577 TGTTAGAGAACAGACCTACGC 57.155 47.619 0.00 0.00 40.72 4.42
2383 2395 6.228258 TCCAACCTGTAAGTTGTAGATTGAC 58.772 40.000 3.95 0.00 44.60 3.18
2455 2467 8.687824 AAACCGTATTGAAAATGATGAATGTC 57.312 30.769 0.00 0.00 0.00 3.06
2497 2510 5.912360 ATATGTGCGTGACATGTCAATAG 57.088 39.130 29.42 22.58 45.43 1.73
2553 2566 0.767375 AGCAGTGCCTTCTCCTGAAA 59.233 50.000 12.58 0.00 0.00 2.69
2568 2581 6.748333 TTTCTTGGTCATATCTTCAAGCAG 57.252 37.500 0.00 0.00 37.21 4.24
2669 2682 4.278170 TCATTGTTGATGTGGGTGAAACTC 59.722 41.667 0.00 0.00 37.06 3.01
2675 2688 4.925054 GTCATTTCATTGTTGATGTGGGTG 59.075 41.667 0.00 0.00 37.06 4.61
2745 2758 2.340210 TGTTCAGCTTGCTGGTGTAA 57.660 45.000 20.62 6.58 43.97 2.41
2885 2898 8.421249 AGAATTTCTTGTCCAACCATTGAATA 57.579 30.769 0.00 0.00 0.00 1.75
2913 2926 4.821805 TGAGTTTTCTAAAAGGAGGCACTG 59.178 41.667 0.00 0.00 41.55 3.66
2940 2953 3.084039 TCTGAAACAGGTCATCAATGCC 58.916 45.455 0.00 0.00 31.51 4.40
2966 2979 5.262588 ACAAATCTTCAAAGGTTGGTGAC 57.737 39.130 0.00 0.00 32.11 3.67
2967 2980 5.449862 CGAACAAATCTTCAAAGGTTGGTGA 60.450 40.000 0.00 0.00 33.61 4.02
3032 3045 5.528600 TGGAATTACCTTGGAGGAAATCA 57.471 39.130 0.07 0.00 37.67 2.57
3072 3085 5.205759 AGAAACATGCTGGAAAAGGAAAG 57.794 39.130 0.00 0.00 0.00 2.62
3076 3089 3.160269 AGGAGAAACATGCTGGAAAAGG 58.840 45.455 0.00 0.00 0.00 3.11
3104 3117 9.653287 TGTTAGATCTTGTTTCAACCTATGTAG 57.347 33.333 0.00 0.00 0.00 2.74
3121 3134 8.608844 AAACGAAGAGAAAATGTGTTAGATCT 57.391 30.769 0.00 0.00 0.00 2.75
3189 3202 0.396435 TCCCATTCGCTTCTGTGTGT 59.604 50.000 0.00 0.00 0.00 3.72
3206 3219 5.984926 TCAATTTTGTCTGTTTCTTGCATCC 59.015 36.000 0.00 0.00 0.00 3.51
3354 3367 9.646427 GTATTAAGGATAAAAATGGTGCAAACA 57.354 29.630 0.00 0.00 0.00 2.83
3355 3368 9.646427 TGTATTAAGGATAAAAATGGTGCAAAC 57.354 29.630 0.00 0.00 0.00 2.93
3474 3487 2.026262 TCCTGGAAACATCTAGGGCAAC 60.026 50.000 8.18 0.00 41.51 4.17
3499 3512 1.166989 TGCTGATTGCGAGCATTTCA 58.833 45.000 0.00 4.99 46.63 2.69
3504 3517 1.742880 GAGGTGCTGATTGCGAGCA 60.743 57.895 0.00 0.00 46.63 4.26
3516 3529 2.861147 AAACTTCTGGTAGGAGGTGC 57.139 50.000 0.00 0.00 0.00 5.01
3518 3531 3.323775 TGGAAAACTTCTGGTAGGAGGT 58.676 45.455 0.00 0.00 0.00 3.85
3525 3538 3.288092 GAGTGGTTGGAAAACTTCTGGT 58.712 45.455 0.00 0.00 32.01 4.00
3582 3595 9.294030 GATGTCAATATCTGAATTTTGTGGTTC 57.706 33.333 0.00 0.00 35.22 3.62
3590 3603 9.484806 AAAGAAGGGATGTCAATATCTGAATTT 57.515 29.630 0.00 0.00 35.22 1.82
3697 3710 4.387026 TGGGAAGGATTGATGAACAACT 57.613 40.909 0.00 0.00 41.52 3.16
3786 3799 5.586243 TGAAGAATTGTGATAGCACCTAAGC 59.414 40.000 8.95 0.00 44.51 3.09
3793 3806 7.086376 GCTTTTTCTGAAGAATTGTGATAGCA 58.914 34.615 0.00 0.00 33.54 3.49
3794 3807 7.086376 TGCTTTTTCTGAAGAATTGTGATAGC 58.914 34.615 0.00 0.00 33.54 2.97
3832 3845 3.325359 AGGGTCTGGTATAGGTGTACC 57.675 52.381 0.00 0.00 43.61 3.34
3834 3847 5.935668 TGATAGGGTCTGGTATAGGTGTA 57.064 43.478 0.00 0.00 0.00 2.90
3837 3850 5.355670 ACATGATAGGGTCTGGTATAGGT 57.644 43.478 0.00 0.00 0.00 3.08
3840 3853 6.222227 TGGTACATGATAGGGTCTGGTATA 57.778 41.667 0.00 0.00 0.00 1.47
3867 3880 5.826737 ACATTCAGCTTCATAATCTTCCAGG 59.173 40.000 0.00 0.00 0.00 4.45
3870 3883 6.474751 GCAAACATTCAGCTTCATAATCTTCC 59.525 38.462 0.00 0.00 0.00 3.46
3919 3932 0.820891 AAGTTCTGCAGTGGTGGCTG 60.821 55.000 14.67 0.00 39.37 4.85
3952 3965 5.009911 TGAGCTGAGTTGTTATGTGCAATTT 59.990 36.000 0.00 0.00 0.00 1.82
3962 3975 4.265904 TCCGAATTGAGCTGAGTTGTTA 57.734 40.909 0.00 0.00 0.00 2.41
3982 3995 6.142958 GCTGCTGTTGAGAAAATAACTTGTTC 59.857 38.462 0.00 0.00 0.00 3.18
4073 4086 9.520515 AGAAAAAGAATACAGAACCATGTACAT 57.479 29.630 1.41 1.41 38.43 2.29
4103 4116 4.789012 AGCATGGTGGTGAAAATTAGTG 57.211 40.909 0.00 0.00 0.00 2.74
4330 4343 4.261867 CCGACGATATGGACAATAGGTTCA 60.262 45.833 0.00 0.00 40.00 3.18
4356 4369 9.617975 GAAGAAGAAAAATTACCATGTCTTCTG 57.382 33.333 16.98 0.00 46.53 3.02
4387 4400 7.388776 TCTTTGTGTGATGAAAGACCAAGATAG 59.611 37.037 0.00 0.00 34.09 2.08
4397 4410 6.962686 TCATGTCTTCTTTGTGTGATGAAAG 58.037 36.000 0.00 0.00 0.00 2.62
4476 4523 8.742777 TCATTAGAAGTTCCTGATGAAAAATGG 58.257 33.333 0.00 0.00 36.59 3.16
4624 4671 6.656314 AAAATTTGGTGTTTCGGTTTTCTC 57.344 33.333 0.00 0.00 0.00 2.87
4632 4679 7.223777 AGTGGAACATAAAAATTTGGTGTTTCG 59.776 33.333 13.82 0.00 44.52 3.46
4634 4681 8.264347 AGAGTGGAACATAAAAATTTGGTGTTT 58.736 29.630 13.82 0.00 44.52 2.83
4755 4802 6.076981 AGAATTTGCCACTGTCAAAGTTAG 57.923 37.500 1.92 0.00 36.83 2.34
4774 4821 9.305555 CCATCAGGGTTCATTATATCAAAGAAT 57.694 33.333 0.00 0.00 0.00 2.40
4792 4839 3.019564 GTTGTTTCCAGATCCATCAGGG 58.980 50.000 0.00 0.00 34.54 4.45
4823 4870 7.920160 TGAATGTAACAGTGCTGATAATTGA 57.080 32.000 6.17 0.00 0.00 2.57
4935 4982 7.661847 TCTTTCTTTTCTACCTGAAATGAGTCC 59.338 37.037 0.00 0.00 44.27 3.85
5007 5055 9.289303 AGTGCGCAAAAATATTATAAAGTGAAG 57.711 29.630 14.00 0.00 0.00 3.02
5016 5064 7.255139 GGAGTTAGGAGTGCGCAAAAATATTAT 60.255 37.037 14.00 0.00 0.00 1.28
5325 5375 3.185594 TGGAACAAGTCGCAATTTCGTAG 59.814 43.478 0.00 0.00 31.92 3.51
5410 5460 2.801077 AATGTAGGGGGAGGTTTTCG 57.199 50.000 0.00 0.00 0.00 3.46
5567 5619 2.859165 TGAACCTGGGTTAAGCTGAG 57.141 50.000 4.88 1.36 38.60 3.35
5577 5629 4.878397 GTCATCTTGTATCTTGAACCTGGG 59.122 45.833 0.00 0.00 0.00 4.45
5662 5714 5.654603 TCAAGTAGCACGAGAAGGAAATA 57.345 39.130 0.00 0.00 0.00 1.40
5682 5734 4.527816 CCCCCTCAACATTTTCTTCATTCA 59.472 41.667 0.00 0.00 0.00 2.57
5841 5895 3.984292 CAGATTTTGCTCGTGCCTC 57.016 52.632 7.05 0.00 38.71 4.70
5983 6041 0.939577 TTTCTGACGTCAGCGAGCAC 60.940 55.000 35.48 0.00 43.46 4.40
6031 6089 5.670149 TTCGTTGCCGTTTGTTTATTAGA 57.330 34.783 0.00 0.00 35.01 2.10
6055 6113 1.660333 CCTTCTGTTTCGCTGTTTCGC 60.660 52.381 0.00 0.00 0.00 4.70
6056 6114 1.069906 CCCTTCTGTTTCGCTGTTTCG 60.070 52.381 0.00 0.00 0.00 3.46
6079 6188 2.404215 TCTACTGTTTCTGTGCTTCGC 58.596 47.619 0.00 0.00 0.00 4.70
6202 6312 1.059913 CCCAGCCAGGTTATAGGGAG 58.940 60.000 0.00 0.00 38.60 4.30
6203 6313 0.345502 ACCCAGCCAGGTTATAGGGA 59.654 55.000 4.31 0.00 36.44 4.20
6204 6314 0.474184 CACCCAGCCAGGTTATAGGG 59.526 60.000 0.00 0.00 38.39 3.53
6205 6315 0.179018 GCACCCAGCCAGGTTATAGG 60.179 60.000 0.00 0.00 38.39 2.57
6206 6316 3.403936 GCACCCAGCCAGGTTATAG 57.596 57.895 0.00 0.00 38.39 1.31
6216 6326 2.282180 TCGGAAAAGGCACCCAGC 60.282 61.111 0.00 0.00 44.65 4.85
6217 6327 2.325082 CGTCGGAAAAGGCACCCAG 61.325 63.158 0.00 0.00 0.00 4.45
6218 6328 2.281208 CGTCGGAAAAGGCACCCA 60.281 61.111 0.00 0.00 0.00 4.51
6219 6329 3.053896 CCGTCGGAAAAGGCACCC 61.054 66.667 4.91 0.00 0.00 4.61
6220 6330 1.449726 AAACCGTCGGAAAAGGCACC 61.450 55.000 20.51 0.00 0.00 5.01
6221 6331 0.382873 AAAACCGTCGGAAAAGGCAC 59.617 50.000 20.51 0.00 0.00 5.01
6222 6332 1.603326 GTAAAACCGTCGGAAAAGGCA 59.397 47.619 20.51 0.00 0.00 4.75
6223 6333 1.603326 TGTAAAACCGTCGGAAAAGGC 59.397 47.619 20.51 4.04 0.00 4.35
6224 6334 2.224784 CCTGTAAAACCGTCGGAAAAGG 59.775 50.000 20.51 10.04 0.00 3.11
6225 6335 2.224784 CCCTGTAAAACCGTCGGAAAAG 59.775 50.000 20.51 4.72 0.00 2.27
6226 6336 2.220313 CCCTGTAAAACCGTCGGAAAA 58.780 47.619 20.51 0.00 0.00 2.29
6227 6337 1.881591 CCCTGTAAAACCGTCGGAAA 58.118 50.000 20.51 0.00 0.00 3.13
6228 6338 0.603439 GCCCTGTAAAACCGTCGGAA 60.603 55.000 20.51 0.00 0.00 4.30
6229 6339 1.004679 GCCCTGTAAAACCGTCGGA 60.005 57.895 20.51 0.00 0.00 4.55
6230 6340 2.385091 CGCCCTGTAAAACCGTCGG 61.385 63.158 10.48 10.48 0.00 4.79
6231 6341 2.385091 CCGCCCTGTAAAACCGTCG 61.385 63.158 0.00 0.00 0.00 5.12
6232 6342 1.004679 TCCGCCCTGTAAAACCGTC 60.005 57.895 0.00 0.00 0.00 4.79
6233 6343 1.301953 GTCCGCCCTGTAAAACCGT 60.302 57.895 0.00 0.00 0.00 4.83
6234 6344 0.885596 TTGTCCGCCCTGTAAAACCG 60.886 55.000 0.00 0.00 0.00 4.44
6235 6345 1.320507 TTTGTCCGCCCTGTAAAACC 58.679 50.000 0.00 0.00 0.00 3.27
6236 6346 3.439895 TTTTTGTCCGCCCTGTAAAAC 57.560 42.857 0.00 0.00 0.00 2.43
6255 6365 5.615289 ACGATATCTGCTCAGGCTATTTTT 58.385 37.500 0.34 0.00 39.59 1.94
6256 6366 5.220710 ACGATATCTGCTCAGGCTATTTT 57.779 39.130 0.34 0.00 39.59 1.82
6257 6367 4.881019 ACGATATCTGCTCAGGCTATTT 57.119 40.909 0.34 0.00 39.59 1.40
6258 6368 5.984695 TTACGATATCTGCTCAGGCTATT 57.015 39.130 0.34 0.00 39.59 1.73
6259 6369 5.984695 TTTACGATATCTGCTCAGGCTAT 57.015 39.130 0.34 0.00 39.59 2.97
6260 6370 5.784578 TTTTACGATATCTGCTCAGGCTA 57.215 39.130 0.34 0.00 39.59 3.93
6261 6371 4.672587 TTTTACGATATCTGCTCAGGCT 57.327 40.909 0.34 0.00 39.59 4.58
6262 6372 4.318121 CGTTTTTACGATATCTGCTCAGGC 60.318 45.833 0.34 0.00 35.49 4.85
6263 6373 4.209288 CCGTTTTTACGATATCTGCTCAGG 59.791 45.833 0.34 0.00 34.64 3.86
6264 6374 4.318121 GCCGTTTTTACGATATCTGCTCAG 60.318 45.833 0.34 0.00 34.64 3.35
6265 6375 3.554324 GCCGTTTTTACGATATCTGCTCA 59.446 43.478 0.34 0.00 34.64 4.26
6266 6376 3.059800 GGCCGTTTTTACGATATCTGCTC 60.060 47.826 0.34 0.00 34.64 4.26
6267 6377 2.870411 GGCCGTTTTTACGATATCTGCT 59.130 45.455 0.34 0.00 34.64 4.24
6268 6378 2.032290 GGGCCGTTTTTACGATATCTGC 60.032 50.000 0.00 0.00 34.64 4.26
6269 6379 2.220133 CGGGCCGTTTTTACGATATCTG 59.780 50.000 19.97 0.00 34.64 2.90
6270 6380 2.476821 CGGGCCGTTTTTACGATATCT 58.523 47.619 19.97 0.00 34.64 1.98
6271 6381 1.528161 CCGGGCCGTTTTTACGATATC 59.472 52.381 26.32 0.00 34.64 1.63
6272 6382 1.585297 CCGGGCCGTTTTTACGATAT 58.415 50.000 26.32 0.00 34.64 1.63
6273 6383 1.088910 GCCGGGCCGTTTTTACGATA 61.089 55.000 26.32 0.00 34.64 2.92
6274 6384 2.400962 GCCGGGCCGTTTTTACGAT 61.401 57.895 26.32 0.00 34.64 3.73
6275 6385 3.049074 GCCGGGCCGTTTTTACGA 61.049 61.111 26.32 0.00 34.64 3.43
6276 6386 3.030763 GAGCCGGGCCGTTTTTACG 62.031 63.158 26.32 8.56 0.00 3.18
6277 6387 2.872557 GAGCCGGGCCGTTTTTAC 59.127 61.111 26.32 6.69 0.00 2.01
6278 6388 2.164865 TACGAGCCGGGCCGTTTTTA 62.165 55.000 30.49 16.30 36.94 1.52
6279 6389 3.534054 TACGAGCCGGGCCGTTTTT 62.534 57.895 30.49 15.05 36.94 1.94
6280 6390 3.534054 TTACGAGCCGGGCCGTTTT 62.534 57.895 30.49 9.66 36.94 2.43
6281 6391 3.534054 TTTACGAGCCGGGCCGTTT 62.534 57.895 30.49 12.56 36.94 3.60
6282 6392 3.534054 TTTTACGAGCCGGGCCGTT 62.534 57.895 30.49 12.98 36.94 4.44
6283 6393 4.006357 TTTTACGAGCCGGGCCGT 62.006 61.111 29.05 29.05 38.49 5.68
6284 6394 3.493440 GTTTTACGAGCCGGGCCG 61.493 66.667 21.46 21.46 0.00 6.13
6285 6395 1.310216 AATGTTTTACGAGCCGGGCC 61.310 55.000 17.02 6.41 0.00 5.80
6286 6396 0.524414 AAATGTTTTACGAGCCGGGC 59.476 50.000 12.11 12.11 0.00 6.13
6287 6397 1.538075 ACAAATGTTTTACGAGCCGGG 59.462 47.619 2.18 0.00 0.00 5.73
6288 6398 2.580589 CACAAATGTTTTACGAGCCGG 58.419 47.619 0.00 0.00 0.00 6.13
6289 6399 2.580589 CCACAAATGTTTTACGAGCCG 58.419 47.619 0.00 0.00 0.00 5.52
6290 6400 2.554893 TCCCACAAATGTTTTACGAGCC 59.445 45.455 0.00 0.00 0.00 4.70
6291 6401 3.561503 GTCCCACAAATGTTTTACGAGC 58.438 45.455 0.00 0.00 0.00 5.03
6292 6402 3.805823 CGTCCCACAAATGTTTTACGAG 58.194 45.455 0.00 0.00 0.00 4.18
6293 6403 2.031857 GCGTCCCACAAATGTTTTACGA 60.032 45.455 12.69 0.00 0.00 3.43
6294 6404 2.287069 TGCGTCCCACAAATGTTTTACG 60.287 45.455 6.85 6.85 0.00 3.18
6295 6405 3.357166 TGCGTCCCACAAATGTTTTAC 57.643 42.857 0.00 0.00 0.00 2.01
6296 6406 3.823873 AGATGCGTCCCACAAATGTTTTA 59.176 39.130 1.23 0.00 0.00 1.52
6297 6407 2.627699 AGATGCGTCCCACAAATGTTTT 59.372 40.909 1.23 0.00 0.00 2.43
6298 6408 2.228822 GAGATGCGTCCCACAAATGTTT 59.771 45.455 1.23 0.00 0.00 2.83
6299 6409 1.812571 GAGATGCGTCCCACAAATGTT 59.187 47.619 1.23 0.00 0.00 2.71
6300 6410 1.003580 AGAGATGCGTCCCACAAATGT 59.996 47.619 1.23 0.00 0.00 2.71
6301 6411 1.742761 AGAGATGCGTCCCACAAATG 58.257 50.000 1.23 0.00 0.00 2.32
6302 6412 2.420129 GGTAGAGATGCGTCCCACAAAT 60.420 50.000 1.23 0.00 0.00 2.32
6303 6413 1.066430 GGTAGAGATGCGTCCCACAAA 60.066 52.381 1.23 0.00 0.00 2.83
6304 6414 0.535335 GGTAGAGATGCGTCCCACAA 59.465 55.000 1.23 0.00 0.00 3.33
6305 6415 0.324368 AGGTAGAGATGCGTCCCACA 60.324 55.000 1.23 0.00 0.00 4.17
6306 6416 0.103208 CAGGTAGAGATGCGTCCCAC 59.897 60.000 1.23 0.00 0.00 4.61
6307 6417 0.033503 TCAGGTAGAGATGCGTCCCA 60.034 55.000 1.23 0.00 0.00 4.37
6308 6418 0.386113 GTCAGGTAGAGATGCGTCCC 59.614 60.000 1.23 0.00 0.00 4.46
6309 6419 0.386113 GGTCAGGTAGAGATGCGTCC 59.614 60.000 1.23 0.00 0.00 4.79
6310 6420 0.386113 GGGTCAGGTAGAGATGCGTC 59.614 60.000 0.00 0.00 0.00 5.19
6311 6421 0.324368 TGGGTCAGGTAGAGATGCGT 60.324 55.000 0.00 0.00 0.00 5.24
6312 6422 0.387202 CTGGGTCAGGTAGAGATGCG 59.613 60.000 0.00 0.00 0.00 4.73
6313 6423 0.105778 GCTGGGTCAGGTAGAGATGC 59.894 60.000 0.00 0.00 31.21 3.91
6314 6424 1.489481 TGCTGGGTCAGGTAGAGATG 58.511 55.000 0.00 0.00 31.21 2.90
6315 6425 2.254152 TTGCTGGGTCAGGTAGAGAT 57.746 50.000 0.00 0.00 31.21 2.75
6316 6426 2.111384 GATTGCTGGGTCAGGTAGAGA 58.889 52.381 0.00 0.00 31.21 3.10
6317 6427 1.833630 TGATTGCTGGGTCAGGTAGAG 59.166 52.381 0.00 0.00 31.21 2.43
6318 6428 1.833630 CTGATTGCTGGGTCAGGTAGA 59.166 52.381 0.00 0.00 38.50 2.59
6319 6429 2.322355 CTGATTGCTGGGTCAGGTAG 57.678 55.000 0.00 0.00 38.50 3.18
6323 6433 2.092538 AGAATCCTGATTGCTGGGTCAG 60.093 50.000 0.00 0.00 41.13 3.51
6324 6434 1.918262 AGAATCCTGATTGCTGGGTCA 59.082 47.619 0.00 0.00 34.17 4.02
6325 6435 2.725221 AGAATCCTGATTGCTGGGTC 57.275 50.000 0.00 0.00 34.17 4.46
6326 6436 2.357569 GGAAGAATCCTGATTGCTGGGT 60.358 50.000 0.00 0.00 42.93 4.51
6327 6437 2.305009 GGAAGAATCCTGATTGCTGGG 58.695 52.381 0.00 0.00 42.93 4.45
6338 6448 3.244770 TGGTGGTGTGTTAGGAAGAATCC 60.245 47.826 0.00 0.00 46.98 3.01
6339 6449 4.015872 TGGTGGTGTGTTAGGAAGAATC 57.984 45.455 0.00 0.00 0.00 2.52
6340 6450 4.335416 CATGGTGGTGTGTTAGGAAGAAT 58.665 43.478 0.00 0.00 0.00 2.40
6341 6451 3.750371 CATGGTGGTGTGTTAGGAAGAA 58.250 45.455 0.00 0.00 0.00 2.52
6342 6452 2.552155 GCATGGTGGTGTGTTAGGAAGA 60.552 50.000 0.00 0.00 0.00 2.87
6343 6453 1.812571 GCATGGTGGTGTGTTAGGAAG 59.187 52.381 0.00 0.00 0.00 3.46
6344 6454 1.546773 GGCATGGTGGTGTGTTAGGAA 60.547 52.381 0.00 0.00 0.00 3.36
6345 6455 0.037590 GGCATGGTGGTGTGTTAGGA 59.962 55.000 0.00 0.00 0.00 2.94
6346 6456 0.038166 AGGCATGGTGGTGTGTTAGG 59.962 55.000 0.00 0.00 0.00 2.69
6347 6457 1.453155 GAGGCATGGTGGTGTGTTAG 58.547 55.000 0.00 0.00 0.00 2.34
6348 6458 0.037590 GGAGGCATGGTGGTGTGTTA 59.962 55.000 0.00 0.00 0.00 2.41
6349 6459 1.228552 GGAGGCATGGTGGTGTGTT 60.229 57.895 0.00 0.00 0.00 3.32
6350 6460 2.129555 GAGGAGGCATGGTGGTGTGT 62.130 60.000 0.00 0.00 0.00 3.72
6351 6461 1.377725 GAGGAGGCATGGTGGTGTG 60.378 63.158 0.00 0.00 0.00 3.82
6352 6462 2.606587 GGAGGAGGCATGGTGGTGT 61.607 63.158 0.00 0.00 0.00 4.16
6353 6463 2.273449 GGAGGAGGCATGGTGGTG 59.727 66.667 0.00 0.00 0.00 4.17
6354 6464 3.017581 GGGAGGAGGCATGGTGGT 61.018 66.667 0.00 0.00 0.00 4.16
6355 6465 3.813724 GGGGAGGAGGCATGGTGG 61.814 72.222 0.00 0.00 0.00 4.61
6356 6466 3.016971 TGGGGAGGAGGCATGGTG 61.017 66.667 0.00 0.00 0.00 4.17
6357 6467 2.693864 CTGGGGAGGAGGCATGGT 60.694 66.667 0.00 0.00 0.00 3.55
6358 6468 4.201122 GCTGGGGAGGAGGCATGG 62.201 72.222 0.00 0.00 0.00 3.66
6359 6469 4.559063 CGCTGGGGAGGAGGCATG 62.559 72.222 0.00 0.00 0.00 4.06
6367 6477 1.983119 TAAATGGAGGCGCTGGGGAG 61.983 60.000 7.64 0.00 0.00 4.30
6368 6478 1.983119 CTAAATGGAGGCGCTGGGGA 61.983 60.000 7.64 0.00 0.00 4.81
6369 6479 1.526917 CTAAATGGAGGCGCTGGGG 60.527 63.158 7.64 0.00 0.00 4.96
6370 6480 2.189499 GCTAAATGGAGGCGCTGGG 61.189 63.158 7.64 0.00 0.00 4.45
6371 6481 0.820891 ATGCTAAATGGAGGCGCTGG 60.821 55.000 7.64 0.00 0.00 4.85
6372 6482 0.309922 CATGCTAAATGGAGGCGCTG 59.690 55.000 7.64 0.00 0.00 5.18
6373 6483 0.820891 CCATGCTAAATGGAGGCGCT 60.821 55.000 7.64 0.00 41.64 5.92
6374 6484 0.819259 TCCATGCTAAATGGAGGCGC 60.819 55.000 0.00 0.00 42.81 6.53
6375 6485 3.402186 TCCATGCTAAATGGAGGCG 57.598 52.632 2.90 0.00 42.81 5.52
6380 6490 8.641498 ATTTCCTACTTATCCATGCTAAATGG 57.359 34.615 0.00 0.00 40.48 3.16
6383 6493 9.778741 CTGTATTTCCTACTTATCCATGCTAAA 57.221 33.333 0.00 0.00 0.00 1.85
6384 6494 8.934697 ACTGTATTTCCTACTTATCCATGCTAA 58.065 33.333 0.00 0.00 0.00 3.09
6385 6495 8.492415 ACTGTATTTCCTACTTATCCATGCTA 57.508 34.615 0.00 0.00 0.00 3.49
6386 6496 7.380423 ACTGTATTTCCTACTTATCCATGCT 57.620 36.000 0.00 0.00 0.00 3.79
6387 6497 9.209175 CTTACTGTATTTCCTACTTATCCATGC 57.791 37.037 0.00 0.00 0.00 4.06
6397 6507 9.880157 TGTCCAATAACTTACTGTATTTCCTAC 57.120 33.333 0.00 0.00 0.00 3.18
6414 6524 9.970395 GCATTTGAATCTTCATATGTCCAATAA 57.030 29.630 18.36 0.00 43.79 1.40
6415 6525 9.134055 TGCATTTGAATCTTCATATGTCCAATA 57.866 29.630 18.36 3.70 43.79 1.90
6416 6526 8.014070 TGCATTTGAATCTTCATATGTCCAAT 57.986 30.769 18.36 2.96 43.79 3.16
6417 6527 7.407393 TGCATTTGAATCTTCATATGTCCAA 57.593 32.000 18.36 1.09 43.79 3.53
6418 6528 7.068962 ACATGCATTTGAATCTTCATATGTCCA 59.931 33.333 18.36 12.23 43.79 4.02
6419 6529 7.431249 ACATGCATTTGAATCTTCATATGTCC 58.569 34.615 18.36 8.53 43.79 4.02
6420 6530 8.867112 AACATGCATTTGAATCTTCATATGTC 57.133 30.769 18.36 13.37 43.79 3.06
6421 6531 7.646526 CGAACATGCATTTGAATCTTCATATGT 59.353 33.333 18.36 10.73 43.79 2.29
6422 6532 7.114388 CCGAACATGCATTTGAATCTTCATATG 59.886 37.037 15.02 15.02 44.33 1.78
6423 6533 7.143340 CCGAACATGCATTTGAATCTTCATAT 58.857 34.615 0.00 0.00 37.00 1.78
6424 6534 6.095300 ACCGAACATGCATTTGAATCTTCATA 59.905 34.615 0.00 0.00 37.00 2.15
6425 6535 5.105635 ACCGAACATGCATTTGAATCTTCAT 60.106 36.000 0.00 0.00 37.00 2.57
6426 6536 4.218200 ACCGAACATGCATTTGAATCTTCA 59.782 37.500 0.00 0.00 34.92 3.02
6427 6537 4.737054 ACCGAACATGCATTTGAATCTTC 58.263 39.130 0.00 0.00 0.00 2.87
6428 6538 4.380867 GGACCGAACATGCATTTGAATCTT 60.381 41.667 0.00 0.00 0.00 2.40
6429 6539 3.129287 GGACCGAACATGCATTTGAATCT 59.871 43.478 0.00 0.00 0.00 2.40
6430 6540 3.119531 TGGACCGAACATGCATTTGAATC 60.120 43.478 0.00 0.00 0.00 2.52
6431 6541 2.824936 TGGACCGAACATGCATTTGAAT 59.175 40.909 0.00 0.00 0.00 2.57
6432 6542 2.234143 TGGACCGAACATGCATTTGAA 58.766 42.857 0.00 0.00 0.00 2.69
6433 6543 1.902938 TGGACCGAACATGCATTTGA 58.097 45.000 0.00 0.00 0.00 2.69
6434 6544 2.327568 GTTGGACCGAACATGCATTTG 58.672 47.619 0.00 0.00 0.00 2.32
6435 6545 1.068610 CGTTGGACCGAACATGCATTT 60.069 47.619 0.00 0.00 0.00 2.32
6436 6546 0.521291 CGTTGGACCGAACATGCATT 59.479 50.000 0.00 0.00 0.00 3.56
6437 6547 1.305219 CCGTTGGACCGAACATGCAT 61.305 55.000 0.00 0.00 0.00 3.96
6438 6548 1.963855 CCGTTGGACCGAACATGCA 60.964 57.895 0.00 0.00 0.00 3.96
6439 6549 1.964373 ACCGTTGGACCGAACATGC 60.964 57.895 0.00 0.00 0.00 4.06
6440 6550 0.882927 ACACCGTTGGACCGAACATG 60.883 55.000 0.00 0.00 0.00 3.21
6441 6551 0.882927 CACACCGTTGGACCGAACAT 60.883 55.000 7.34 0.00 0.00 2.71
6442 6552 1.521906 CACACCGTTGGACCGAACA 60.522 57.895 7.34 0.00 0.00 3.18
6443 6553 0.810823 TTCACACCGTTGGACCGAAC 60.811 55.000 0.00 0.00 0.00 3.95
6444 6554 0.107800 TTTCACACCGTTGGACCGAA 60.108 50.000 0.00 0.00 0.00 4.30
6445 6555 0.107800 TTTTCACACCGTTGGACCGA 60.108 50.000 0.00 0.00 0.00 4.69
6446 6556 0.948678 ATTTTCACACCGTTGGACCG 59.051 50.000 0.00 0.00 0.00 4.79
6447 6557 1.679153 ACATTTTCACACCGTTGGACC 59.321 47.619 0.00 0.00 0.00 4.46
6448 6558 4.035909 AGTTACATTTTCACACCGTTGGAC 59.964 41.667 0.00 0.00 0.00 4.02
6449 6559 4.200874 AGTTACATTTTCACACCGTTGGA 58.799 39.130 0.00 0.00 0.00 3.53
6450 6560 4.561735 AGTTACATTTTCACACCGTTGG 57.438 40.909 0.00 0.00 0.00 3.77
6451 6561 8.073768 AGATAAAGTTACATTTTCACACCGTTG 58.926 33.333 0.00 0.00 0.00 4.10
6452 6562 8.161699 AGATAAAGTTACATTTTCACACCGTT 57.838 30.769 0.00 0.00 0.00 4.44
6453 6563 7.739498 AGATAAAGTTACATTTTCACACCGT 57.261 32.000 0.00 0.00 0.00 4.83
6469 6579 9.466497 TCTGGAATGATTTGCTAAAGATAAAGT 57.534 29.630 0.00 0.00 0.00 2.66
6477 6587 9.866655 ACCTATAATCTGGAATGATTTGCTAAA 57.133 29.630 0.00 0.00 37.73 1.85
6478 6588 9.507329 GACCTATAATCTGGAATGATTTGCTAA 57.493 33.333 0.00 0.00 37.73 3.09
6479 6589 8.103305 GGACCTATAATCTGGAATGATTTGCTA 58.897 37.037 0.00 0.00 37.73 3.49
6480 6590 6.944862 GGACCTATAATCTGGAATGATTTGCT 59.055 38.462 0.00 0.00 37.73 3.91
6481 6591 6.151817 GGGACCTATAATCTGGAATGATTTGC 59.848 42.308 0.00 0.00 37.73 3.68
6482 6592 7.465116 AGGGACCTATAATCTGGAATGATTTG 58.535 38.462 0.00 0.00 37.73 2.32
6483 6593 7.519004 AGAGGGACCTATAATCTGGAATGATTT 59.481 37.037 0.00 0.00 37.73 2.17
6484 6594 7.028131 AGAGGGACCTATAATCTGGAATGATT 58.972 38.462 0.00 0.00 39.63 2.57
6485 6595 6.579214 AGAGGGACCTATAATCTGGAATGAT 58.421 40.000 0.00 0.00 0.00 2.45
6486 6596 5.982391 AGAGGGACCTATAATCTGGAATGA 58.018 41.667 0.00 0.00 0.00 2.57
6487 6597 5.188751 GGAGAGGGACCTATAATCTGGAATG 59.811 48.000 0.00 0.00 0.00 2.67
6488 6598 5.162715 TGGAGAGGGACCTATAATCTGGAAT 60.163 44.000 0.00 0.00 0.00 3.01
6489 6599 4.172041 TGGAGAGGGACCTATAATCTGGAA 59.828 45.833 0.00 0.00 0.00 3.53
6490 6600 3.732742 TGGAGAGGGACCTATAATCTGGA 59.267 47.826 0.00 0.00 0.00 3.86
6491 6601 4.133526 TGGAGAGGGACCTATAATCTGG 57.866 50.000 0.00 0.00 0.00 3.86
6492 6602 5.782331 TGATTGGAGAGGGACCTATAATCTG 59.218 44.000 8.93 0.00 0.00 2.90
6493 6603 5.982391 TGATTGGAGAGGGACCTATAATCT 58.018 41.667 8.93 0.00 0.00 2.40
6494 6604 6.688073 TTGATTGGAGAGGGACCTATAATC 57.312 41.667 0.00 0.00 0.00 1.75
6495 6605 6.216456 GGATTGATTGGAGAGGGACCTATAAT 59.784 42.308 0.00 0.00 0.00 1.28
6496 6606 5.548056 GGATTGATTGGAGAGGGACCTATAA 59.452 44.000 0.00 0.00 0.00 0.98
6497 6607 5.094387 GGATTGATTGGAGAGGGACCTATA 58.906 45.833 0.00 0.00 0.00 1.31
6498 6608 3.913163 GGATTGATTGGAGAGGGACCTAT 59.087 47.826 0.00 0.00 0.00 2.57
6499 6609 3.051032 AGGATTGATTGGAGAGGGACCTA 60.051 47.826 0.00 0.00 0.00 3.08
6500 6610 2.131023 GGATTGATTGGAGAGGGACCT 58.869 52.381 0.00 0.00 0.00 3.85
6501 6611 2.105649 GAGGATTGATTGGAGAGGGACC 59.894 54.545 0.00 0.00 0.00 4.46
6502 6612 3.044894 AGAGGATTGATTGGAGAGGGAC 58.955 50.000 0.00 0.00 0.00 4.46
6503 6613 3.044156 CAGAGGATTGATTGGAGAGGGA 58.956 50.000 0.00 0.00 0.00 4.20
6504 6614 3.044156 TCAGAGGATTGATTGGAGAGGG 58.956 50.000 0.00 0.00 0.00 4.30
6505 6615 4.767578 TTCAGAGGATTGATTGGAGAGG 57.232 45.455 0.00 0.00 0.00 3.69
6506 6616 7.451732 ACATATTCAGAGGATTGATTGGAGAG 58.548 38.462 0.00 0.00 0.00 3.20
6507 6617 7.384524 ACATATTCAGAGGATTGATTGGAGA 57.615 36.000 0.00 0.00 0.00 3.71
6508 6618 7.937942 AGAACATATTCAGAGGATTGATTGGAG 59.062 37.037 0.00 0.00 37.29 3.86
6509 6619 7.809238 AGAACATATTCAGAGGATTGATTGGA 58.191 34.615 0.00 0.00 37.29 3.53
6510 6620 8.461249 AAGAACATATTCAGAGGATTGATTGG 57.539 34.615 0.00 0.00 37.29 3.16
6511 6621 9.339850 AGAAGAACATATTCAGAGGATTGATTG 57.660 33.333 0.00 0.00 37.29 2.67
6519 6629 9.482627 GGTACATTAGAAGAACATATTCAGAGG 57.517 37.037 0.00 0.00 37.29 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.