Multiple sequence alignment - TraesCS5A01G178000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G178000 chr5A 100.000 1802 0 0 1 1802 375563627 375565428 0.000000e+00 3328.0
1 TraesCS5A01G178000 chr5A 100.000 629 0 0 2011 2639 375565637 375566265 0.000000e+00 1162.0
2 TraesCS5A01G178000 chr5A 97.241 435 6 2 1 431 672327111 672327543 0.000000e+00 732.0
3 TraesCS5A01G178000 chr5A 96.330 436 11 2 1 432 680496116 680496550 0.000000e+00 712.0
4 TraesCS5A01G178000 chr5D 94.915 1239 40 6 429 1657 283348410 283349635 0.000000e+00 1917.0
5 TraesCS5A01G178000 chr5D 92.063 63 5 0 2288 2350 497127516 497127454 3.620000e-14 89.8
6 TraesCS5A01G178000 chr5D 92.063 63 5 0 2288 2350 497408406 497408468 3.620000e-14 89.8
7 TraesCS5A01G178000 chr5D 92.063 63 5 0 2288 2350 497440667 497440729 3.620000e-14 89.8
8 TraesCS5A01G178000 chr5B 94.263 889 28 9 780 1657 321551089 321551965 0.000000e+00 1338.0
9 TraesCS5A01G178000 chr5B 87.302 630 70 7 2011 2639 321552240 321552860 0.000000e+00 712.0
10 TraesCS5A01G178000 chr5B 97.727 44 1 0 1679 1722 321551951 321551994 2.820000e-10 76.8
11 TraesCS5A01G178000 chr1A 97.706 436 3 3 1 432 543479787 543480219 0.000000e+00 743.0
12 TraesCS5A01G178000 chr1A 94.872 39 2 0 2551 2589 276267300 276267338 7.890000e-06 62.1
13 TraesCS5A01G178000 chr3B 96.782 435 9 2 1 431 8726664 8727097 0.000000e+00 721.0
14 TraesCS5A01G178000 chr3B 80.503 159 28 3 2109 2266 492606935 492607091 4.610000e-23 119.0
15 TraesCS5A01G178000 chr3B 89.362 47 5 0 2586 2632 86114916 86114962 2.840000e-05 60.2
16 TraesCS5A01G178000 chr7B 95.672 439 12 4 1 433 579519464 579519027 0.000000e+00 699.0
17 TraesCS5A01G178000 chr1B 94.954 436 18 2 1 432 9083593 9083158 0.000000e+00 680.0
18 TraesCS5A01G178000 chr1B 95.122 41 2 0 2586 2626 365673927 365673887 6.100000e-07 65.8
19 TraesCS5A01G178000 chr1B 97.222 36 1 0 2586 2621 171062842 171062877 7.890000e-06 62.1
20 TraesCS5A01G178000 chr6B 93.807 436 18 3 1 432 672916182 672915752 0.000000e+00 647.0
21 TraesCS5A01G178000 chr6B 85.526 76 11 0 2286 2361 246253512 246253437 2.180000e-11 80.5
22 TraesCS5A01G178000 chr6D 91.183 431 31 3 1 428 407197955 407198381 1.760000e-161 579.0
23 TraesCS5A01G178000 chr4A 90.826 436 24 7 1 432 181702564 181702987 1.060000e-158 569.0
24 TraesCS5A01G178000 chr2B 83.558 371 44 7 2286 2639 462957584 462957954 5.440000e-87 331.0
25 TraesCS5A01G178000 chr2B 97.297 37 1 0 2586 2622 657100701 657100665 2.190000e-06 63.9
26 TraesCS5A01G178000 chr7D 81.793 368 51 4 2288 2639 94610925 94610558 7.140000e-76 294.0
27 TraesCS5A01G178000 chr7D 78.846 156 28 4 2109 2261 101715716 101715563 1.670000e-17 100.0
28 TraesCS5A01G178000 chr7D 92.063 63 5 0 2288 2350 637043466 637043528 3.620000e-14 89.8
29 TraesCS5A01G178000 chr7D 87.500 72 9 0 2279 2350 178156236 178156165 1.680000e-12 84.2
30 TraesCS5A01G178000 chr4D 85.897 156 22 0 646 801 85011125 85011280 1.620000e-37 167.0
31 TraesCS5A01G178000 chr7A 88.312 77 6 3 2103 2177 42997444 42997369 3.620000e-14 89.8
32 TraesCS5A01G178000 chrUn 88.571 70 8 0 2276 2345 104130109 104130178 4.680000e-13 86.1
33 TraesCS5A01G178000 chr2A 79.339 121 20 2 2287 2403 769616633 769616752 2.180000e-11 80.5
34 TraesCS5A01G178000 chr2D 91.489 47 4 0 2586 2632 168964957 168964911 6.100000e-07 65.8
35 TraesCS5A01G178000 chr2D 94.737 38 2 0 2595 2632 542618694 542618657 2.840000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G178000 chr5A 375563627 375566265 2638 False 2245.000000 3328 100.000000 1 2639 2 chr5A.!!$F3 2638
1 TraesCS5A01G178000 chr5D 283348410 283349635 1225 False 1917.000000 1917 94.915000 429 1657 1 chr5D.!!$F1 1228
2 TraesCS5A01G178000 chr5B 321551089 321552860 1771 False 708.933333 1338 93.097333 780 2639 3 chr5B.!!$F1 1859

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
334 335 0.031585 ACGACTTTGACAGCAGCGTA 59.968 50.0 0.0 0.0 0.0 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2128 2180 1.177895 ATTGCCATGTGTTCGTGCCA 61.178 50.0 0.0 0.0 0.0 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.976593 TAGATGCTGGCCAGGAGG 58.023 61.111 33.46 10.38 38.23 4.30
18 19 1.003442 TAGATGCTGGCCAGGAGGT 59.997 57.895 33.46 23.27 37.19 3.85
19 20 1.050988 TAGATGCTGGCCAGGAGGTC 61.051 60.000 33.46 25.04 41.04 3.85
20 21 3.746949 GATGCTGGCCAGGAGGTCG 62.747 68.421 33.46 8.32 44.71 4.79
23 24 4.154347 CTGGCCAGGAGGTCGCTC 62.154 72.222 26.14 0.00 44.71 5.03
28 29 4.200283 CAGGAGGTCGCTCGGCTC 62.200 72.222 0.00 0.00 0.00 4.70
54 55 2.438614 CGAGAGCACGGGAGGAGA 60.439 66.667 0.00 0.00 0.00 3.71
55 56 2.046864 CGAGAGCACGGGAGGAGAA 61.047 63.158 0.00 0.00 0.00 2.87
56 57 1.595993 CGAGAGCACGGGAGGAGAAA 61.596 60.000 0.00 0.00 0.00 2.52
57 58 0.608640 GAGAGCACGGGAGGAGAAAA 59.391 55.000 0.00 0.00 0.00 2.29
58 59 0.610687 AGAGCACGGGAGGAGAAAAG 59.389 55.000 0.00 0.00 0.00 2.27
59 60 0.391793 GAGCACGGGAGGAGAAAAGG 60.392 60.000 0.00 0.00 0.00 3.11
60 61 1.377333 GCACGGGAGGAGAAAAGGG 60.377 63.158 0.00 0.00 0.00 3.95
61 62 1.838073 GCACGGGAGGAGAAAAGGGA 61.838 60.000 0.00 0.00 0.00 4.20
62 63 0.690762 CACGGGAGGAGAAAAGGGAA 59.309 55.000 0.00 0.00 0.00 3.97
63 64 0.984995 ACGGGAGGAGAAAAGGGAAG 59.015 55.000 0.00 0.00 0.00 3.46
64 65 0.253327 CGGGAGGAGAAAAGGGAAGG 59.747 60.000 0.00 0.00 0.00 3.46
65 66 0.626382 GGGAGGAGAAAAGGGAAGGG 59.374 60.000 0.00 0.00 0.00 3.95
66 67 0.626382 GGAGGAGAAAAGGGAAGGGG 59.374 60.000 0.00 0.00 0.00 4.79
67 68 0.626382 GAGGAGAAAAGGGAAGGGGG 59.374 60.000 0.00 0.00 0.00 5.40
95 96 4.767255 GGCGCAGTGGAGACCAGG 62.767 72.222 10.83 0.00 32.34 4.45
96 97 4.767255 GCGCAGTGGAGACCAGGG 62.767 72.222 0.30 0.00 32.34 4.45
97 98 4.087892 CGCAGTGGAGACCAGGGG 62.088 72.222 0.00 0.00 32.34 4.79
98 99 2.607750 GCAGTGGAGACCAGGGGA 60.608 66.667 0.00 0.00 32.34 4.81
99 100 2.664081 GCAGTGGAGACCAGGGGAG 61.664 68.421 0.00 0.00 32.34 4.30
100 101 1.992277 CAGTGGAGACCAGGGGAGG 60.992 68.421 0.00 0.00 32.34 4.30
101 102 2.177518 AGTGGAGACCAGGGGAGGA 61.178 63.158 0.00 0.00 32.34 3.71
102 103 1.687493 GTGGAGACCAGGGGAGGAG 60.687 68.421 0.00 0.00 32.34 3.69
103 104 2.041405 GGAGACCAGGGGAGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
104 105 2.766229 GAGACCAGGGGAGGAGGC 60.766 72.222 0.00 0.00 0.00 4.70
105 106 4.787280 AGACCAGGGGAGGAGGCG 62.787 72.222 0.00 0.00 0.00 5.52
117 118 4.214327 GAGGCGGGGCTCGAGAAG 62.214 72.222 18.75 4.54 42.43 2.85
119 120 4.821589 GGCGGGGCTCGAGAAGTG 62.822 72.222 18.75 3.59 42.43 3.16
120 121 4.821589 GCGGGGCTCGAGAAGTGG 62.822 72.222 18.75 1.43 42.43 4.00
121 122 3.068691 CGGGGCTCGAGAAGTGGA 61.069 66.667 18.75 0.00 42.43 4.02
122 123 2.896443 GGGGCTCGAGAAGTGGAG 59.104 66.667 18.75 0.00 0.00 3.86
123 124 2.726351 GGGGCTCGAGAAGTGGAGG 61.726 68.421 18.75 0.00 0.00 4.30
124 125 2.726351 GGGCTCGAGAAGTGGAGGG 61.726 68.421 18.75 0.00 0.00 4.30
125 126 1.682684 GGCTCGAGAAGTGGAGGGA 60.683 63.158 18.75 0.00 0.00 4.20
126 127 1.045911 GGCTCGAGAAGTGGAGGGAT 61.046 60.000 18.75 0.00 0.00 3.85
127 128 0.827368 GCTCGAGAAGTGGAGGGATT 59.173 55.000 18.75 0.00 0.00 3.01
128 129 1.472376 GCTCGAGAAGTGGAGGGATTG 60.472 57.143 18.75 0.00 0.00 2.67
129 130 1.137872 CTCGAGAAGTGGAGGGATTGG 59.862 57.143 6.58 0.00 0.00 3.16
130 131 0.462759 CGAGAAGTGGAGGGATTGGC 60.463 60.000 0.00 0.00 0.00 4.52
131 132 0.915364 GAGAAGTGGAGGGATTGGCT 59.085 55.000 0.00 0.00 0.00 4.75
132 133 0.622665 AGAAGTGGAGGGATTGGCTG 59.377 55.000 0.00 0.00 0.00 4.85
133 134 1.000396 AAGTGGAGGGATTGGCTGC 60.000 57.895 0.00 0.00 0.00 5.25
134 135 1.504275 AAGTGGAGGGATTGGCTGCT 61.504 55.000 0.00 0.00 0.00 4.24
135 136 1.000396 GTGGAGGGATTGGCTGCTT 60.000 57.895 0.00 0.00 0.00 3.91
136 137 1.000521 TGGAGGGATTGGCTGCTTG 60.001 57.895 0.00 0.00 0.00 4.01
137 138 1.755783 GGAGGGATTGGCTGCTTGG 60.756 63.158 0.00 0.00 0.00 3.61
138 139 1.304282 GAGGGATTGGCTGCTTGGA 59.696 57.895 0.00 0.00 0.00 3.53
139 140 0.750911 GAGGGATTGGCTGCTTGGAG 60.751 60.000 0.00 0.00 0.00 3.86
140 141 1.210204 AGGGATTGGCTGCTTGGAGA 61.210 55.000 0.00 0.00 0.00 3.71
141 142 1.034292 GGGATTGGCTGCTTGGAGAC 61.034 60.000 0.00 0.00 0.00 3.36
142 143 1.372087 GGATTGGCTGCTTGGAGACG 61.372 60.000 0.00 0.00 0.00 4.18
143 144 0.391661 GATTGGCTGCTTGGAGACGA 60.392 55.000 0.00 0.00 0.00 4.20
144 145 0.036732 ATTGGCTGCTTGGAGACGAA 59.963 50.000 0.00 0.00 0.00 3.85
145 146 0.036732 TTGGCTGCTTGGAGACGAAT 59.963 50.000 0.00 0.00 0.00 3.34
146 147 0.674581 TGGCTGCTTGGAGACGAATG 60.675 55.000 0.00 0.00 0.00 2.67
147 148 1.372087 GGCTGCTTGGAGACGAATGG 61.372 60.000 0.00 0.00 0.00 3.16
148 149 1.372087 GCTGCTTGGAGACGAATGGG 61.372 60.000 0.00 0.00 0.00 4.00
149 150 0.250234 CTGCTTGGAGACGAATGGGA 59.750 55.000 0.00 0.00 0.00 4.37
150 151 0.911769 TGCTTGGAGACGAATGGGAT 59.088 50.000 0.00 0.00 0.00 3.85
151 152 1.281867 TGCTTGGAGACGAATGGGATT 59.718 47.619 0.00 0.00 0.00 3.01
152 153 1.672881 GCTTGGAGACGAATGGGATTG 59.327 52.381 0.00 0.00 0.00 2.67
153 154 2.292267 CTTGGAGACGAATGGGATTGG 58.708 52.381 0.00 0.00 0.00 3.16
154 155 0.546122 TGGAGACGAATGGGATTGGG 59.454 55.000 0.00 0.00 0.00 4.12
155 156 0.179018 GGAGACGAATGGGATTGGGG 60.179 60.000 0.00 0.00 0.00 4.96
156 157 0.179018 GAGACGAATGGGATTGGGGG 60.179 60.000 0.00 0.00 0.00 5.40
157 158 1.828224 GACGAATGGGATTGGGGGC 60.828 63.158 0.00 0.00 0.00 5.80
158 159 2.284515 GACGAATGGGATTGGGGGCT 62.285 60.000 0.00 0.00 0.00 5.19
159 160 0.991355 ACGAATGGGATTGGGGGCTA 60.991 55.000 0.00 0.00 0.00 3.93
160 161 0.250901 CGAATGGGATTGGGGGCTAG 60.251 60.000 0.00 0.00 0.00 3.42
161 162 0.113190 GAATGGGATTGGGGGCTAGG 59.887 60.000 0.00 0.00 0.00 3.02
162 163 0.630478 AATGGGATTGGGGGCTAGGT 60.630 55.000 0.00 0.00 0.00 3.08
163 164 0.630478 ATGGGATTGGGGGCTAGGTT 60.630 55.000 0.00 0.00 0.00 3.50
164 165 0.853586 TGGGATTGGGGGCTAGGTTT 60.854 55.000 0.00 0.00 0.00 3.27
165 166 0.338467 GGGATTGGGGGCTAGGTTTT 59.662 55.000 0.00 0.00 0.00 2.43
166 167 1.688311 GGGATTGGGGGCTAGGTTTTC 60.688 57.143 0.00 0.00 0.00 2.29
167 168 1.006639 GGATTGGGGGCTAGGTTTTCA 59.993 52.381 0.00 0.00 0.00 2.69
168 169 2.100197 GATTGGGGGCTAGGTTTTCAC 58.900 52.381 0.00 0.00 0.00 3.18
169 170 0.113580 TTGGGGGCTAGGTTTTCACC 59.886 55.000 0.00 0.00 44.67 4.02
177 178 2.358984 GGTTTTCACCGCGCCCTA 60.359 61.111 0.00 0.00 31.60 3.53
178 179 2.683859 GGTTTTCACCGCGCCCTAC 61.684 63.158 0.00 0.00 31.60 3.18
189 190 3.942439 GCCCTACGATCCAGCCCC 61.942 72.222 0.00 0.00 0.00 5.80
190 191 2.445845 CCCTACGATCCAGCCCCA 60.446 66.667 0.00 0.00 0.00 4.96
191 192 2.808206 CCCTACGATCCAGCCCCAC 61.808 68.421 0.00 0.00 0.00 4.61
192 193 2.417516 CTACGATCCAGCCCCACG 59.582 66.667 0.00 0.00 0.00 4.94
193 194 3.792053 CTACGATCCAGCCCCACGC 62.792 68.421 0.00 0.00 37.98 5.34
196 197 4.554036 GATCCAGCCCCACGCCTC 62.554 72.222 0.00 0.00 38.78 4.70
203 204 4.394712 CCCCACGCCTCTCGCTTT 62.395 66.667 0.00 0.00 43.23 3.51
204 205 2.815647 CCCACGCCTCTCGCTTTC 60.816 66.667 0.00 0.00 43.23 2.62
205 206 2.262915 CCACGCCTCTCGCTTTCT 59.737 61.111 0.00 0.00 43.23 2.52
206 207 1.807573 CCACGCCTCTCGCTTTCTC 60.808 63.158 0.00 0.00 43.23 2.87
207 208 1.080501 CACGCCTCTCGCTTTCTCA 60.081 57.895 0.00 0.00 43.23 3.27
208 209 1.080434 ACGCCTCTCGCTTTCTCAC 60.080 57.895 0.00 0.00 43.23 3.51
209 210 1.807573 CGCCTCTCGCTTTCTCACC 60.808 63.158 0.00 0.00 34.21 4.02
210 211 1.448717 GCCTCTCGCTTTCTCACCC 60.449 63.158 0.00 0.00 0.00 4.61
211 212 1.975327 CCTCTCGCTTTCTCACCCA 59.025 57.895 0.00 0.00 0.00 4.51
212 213 0.108424 CCTCTCGCTTTCTCACCCAG 60.108 60.000 0.00 0.00 0.00 4.45
213 214 0.108424 CTCTCGCTTTCTCACCCAGG 60.108 60.000 0.00 0.00 0.00 4.45
214 215 0.541998 TCTCGCTTTCTCACCCAGGA 60.542 55.000 0.00 0.00 0.00 3.86
215 216 0.390472 CTCGCTTTCTCACCCAGGAC 60.390 60.000 0.00 0.00 0.00 3.85
216 217 1.738099 CGCTTTCTCACCCAGGACG 60.738 63.158 0.00 0.00 0.00 4.79
217 218 2.035442 GCTTTCTCACCCAGGACGC 61.035 63.158 0.00 0.00 0.00 5.19
218 219 1.371183 CTTTCTCACCCAGGACGCA 59.629 57.895 0.00 0.00 0.00 5.24
219 220 0.951040 CTTTCTCACCCAGGACGCAC 60.951 60.000 0.00 0.00 0.00 5.34
220 221 2.709125 TTTCTCACCCAGGACGCACG 62.709 60.000 0.00 0.00 0.00 5.34
240 241 2.466867 GGGACGCACCAATACACTG 58.533 57.895 1.83 0.00 41.20 3.66
241 242 1.024579 GGGACGCACCAATACACTGG 61.025 60.000 1.83 0.00 42.68 4.00
242 243 1.024579 GGACGCACCAATACACTGGG 61.025 60.000 0.00 0.00 41.16 4.45
243 244 1.644786 GACGCACCAATACACTGGGC 61.645 60.000 0.00 0.00 41.16 5.36
244 245 2.406616 CGCACCAATACACTGGGCC 61.407 63.158 0.00 0.00 41.16 5.80
245 246 2.052104 GCACCAATACACTGGGCCC 61.052 63.158 17.59 17.59 41.16 5.80
246 247 1.748879 CACCAATACACTGGGCCCG 60.749 63.158 19.37 14.85 41.16 6.13
247 248 2.228480 ACCAATACACTGGGCCCGT 61.228 57.895 19.37 15.59 41.16 5.28
248 249 0.910566 ACCAATACACTGGGCCCGTA 60.911 55.000 19.37 14.08 41.16 4.02
249 250 0.179056 CCAATACACTGGGCCCGTAG 60.179 60.000 19.37 13.00 32.32 3.51
250 251 0.828022 CAATACACTGGGCCCGTAGA 59.172 55.000 19.37 9.47 0.00 2.59
251 252 0.828677 AATACACTGGGCCCGTAGAC 59.171 55.000 19.37 0.00 0.00 2.59
252 253 0.324923 ATACACTGGGCCCGTAGACA 60.325 55.000 19.37 0.00 0.00 3.41
253 254 0.324923 TACACTGGGCCCGTAGACAT 60.325 55.000 19.37 0.68 0.00 3.06
254 255 1.198759 ACACTGGGCCCGTAGACATT 61.199 55.000 19.37 0.00 0.00 2.71
255 256 0.035439 CACTGGGCCCGTAGACATTT 60.035 55.000 19.37 0.00 0.00 2.32
256 257 0.035439 ACTGGGCCCGTAGACATTTG 60.035 55.000 19.37 0.00 0.00 2.32
257 258 0.251916 CTGGGCCCGTAGACATTTGA 59.748 55.000 19.37 0.00 0.00 2.69
258 259 0.251916 TGGGCCCGTAGACATTTGAG 59.748 55.000 19.37 0.00 0.00 3.02
259 260 0.463833 GGGCCCGTAGACATTTGAGG 60.464 60.000 5.69 0.00 0.00 3.86
260 261 1.095807 GGCCCGTAGACATTTGAGGC 61.096 60.000 0.00 0.00 38.21 4.70
261 262 1.095807 GCCCGTAGACATTTGAGGCC 61.096 60.000 0.00 0.00 32.68 5.19
262 263 0.463833 CCCGTAGACATTTGAGGCCC 60.464 60.000 0.00 0.00 0.00 5.80
263 264 0.251916 CCGTAGACATTTGAGGCCCA 59.748 55.000 0.00 0.00 0.00 5.36
264 265 1.369625 CGTAGACATTTGAGGCCCAC 58.630 55.000 0.00 0.00 0.00 4.61
265 266 1.751437 GTAGACATTTGAGGCCCACC 58.249 55.000 0.00 0.00 0.00 4.61
266 267 0.623723 TAGACATTTGAGGCCCACCC 59.376 55.000 0.00 0.00 36.11 4.61
267 268 2.035626 ACATTTGAGGCCCACCCG 59.964 61.111 0.00 0.00 39.21 5.28
268 269 2.035626 CATTTGAGGCCCACCCGT 59.964 61.111 0.00 0.00 39.21 5.28
269 270 2.046285 CATTTGAGGCCCACCCGTC 61.046 63.158 0.00 0.00 39.21 4.79
270 271 2.534396 ATTTGAGGCCCACCCGTCA 61.534 57.895 0.00 0.00 39.21 4.35
271 272 1.863155 ATTTGAGGCCCACCCGTCAT 61.863 55.000 0.00 0.00 39.21 3.06
272 273 2.762969 TTTGAGGCCCACCCGTCATG 62.763 60.000 0.00 0.00 39.21 3.07
273 274 4.489771 GAGGCCCACCCGTCATGG 62.490 72.222 0.00 0.00 39.21 3.66
275 276 4.796495 GGCCCACCCGTCATGGAC 62.796 72.222 0.00 0.00 42.00 4.02
276 277 4.028490 GCCCACCCGTCATGGACA 62.028 66.667 0.00 0.00 42.00 4.02
277 278 2.753701 CCCACCCGTCATGGACAA 59.246 61.111 0.00 0.00 42.00 3.18
278 279 1.377202 CCCACCCGTCATGGACAAG 60.377 63.158 0.00 0.00 42.00 3.16
279 280 1.377202 CCACCCGTCATGGACAAGG 60.377 63.158 0.00 0.00 42.00 3.61
280 281 1.676968 CACCCGTCATGGACAAGGA 59.323 57.895 8.84 0.00 42.00 3.36
281 282 0.036164 CACCCGTCATGGACAAGGAA 59.964 55.000 8.84 0.00 42.00 3.36
282 283 0.324943 ACCCGTCATGGACAAGGAAG 59.675 55.000 8.84 0.00 42.00 3.46
283 284 1.026718 CCCGTCATGGACAAGGAAGC 61.027 60.000 0.00 0.00 42.00 3.86
284 285 0.321564 CCGTCATGGACAAGGAAGCA 60.322 55.000 0.00 0.00 42.00 3.91
285 286 1.522668 CGTCATGGACAAGGAAGCAA 58.477 50.000 0.00 0.00 32.09 3.91
286 287 1.879380 CGTCATGGACAAGGAAGCAAA 59.121 47.619 0.00 0.00 32.09 3.68
287 288 2.293122 CGTCATGGACAAGGAAGCAAAA 59.707 45.455 0.00 0.00 32.09 2.44
288 289 3.642705 GTCATGGACAAGGAAGCAAAAC 58.357 45.455 0.00 0.00 32.09 2.43
289 290 3.068024 GTCATGGACAAGGAAGCAAAACA 59.932 43.478 0.00 0.00 32.09 2.83
290 291 3.703556 TCATGGACAAGGAAGCAAAACAA 59.296 39.130 0.00 0.00 0.00 2.83
291 292 4.161189 TCATGGACAAGGAAGCAAAACAAA 59.839 37.500 0.00 0.00 0.00 2.83
292 293 4.751767 TGGACAAGGAAGCAAAACAAAT 57.248 36.364 0.00 0.00 0.00 2.32
293 294 4.440880 TGGACAAGGAAGCAAAACAAATG 58.559 39.130 0.00 0.00 0.00 2.32
294 295 4.161189 TGGACAAGGAAGCAAAACAAATGA 59.839 37.500 0.00 0.00 0.00 2.57
295 296 4.746611 GGACAAGGAAGCAAAACAAATGAG 59.253 41.667 0.00 0.00 0.00 2.90
296 297 5.343307 ACAAGGAAGCAAAACAAATGAGT 57.657 34.783 0.00 0.00 0.00 3.41
297 298 5.351458 ACAAGGAAGCAAAACAAATGAGTC 58.649 37.500 0.00 0.00 0.00 3.36
298 299 5.105392 ACAAGGAAGCAAAACAAATGAGTCA 60.105 36.000 0.00 0.00 0.00 3.41
299 300 4.936891 AGGAAGCAAAACAAATGAGTCAC 58.063 39.130 0.00 0.00 0.00 3.67
300 301 4.402155 AGGAAGCAAAACAAATGAGTCACA 59.598 37.500 0.00 0.00 0.00 3.58
301 302 4.741676 GGAAGCAAAACAAATGAGTCACAG 59.258 41.667 0.00 0.00 0.00 3.66
302 303 5.450412 GGAAGCAAAACAAATGAGTCACAGA 60.450 40.000 0.00 0.00 0.00 3.41
303 304 5.179045 AGCAAAACAAATGAGTCACAGAG 57.821 39.130 0.00 0.00 0.00 3.35
304 305 4.037208 AGCAAAACAAATGAGTCACAGAGG 59.963 41.667 0.00 0.00 0.00 3.69
305 306 4.036734 GCAAAACAAATGAGTCACAGAGGA 59.963 41.667 0.00 0.00 0.00 3.71
306 307 5.514279 CAAAACAAATGAGTCACAGAGGAC 58.486 41.667 0.00 0.00 38.08 3.85
313 314 0.889306 AGTCACAGAGGACTAACGGC 59.111 55.000 0.00 0.00 45.95 5.68
314 315 0.108756 GTCACAGAGGACTAACGGCC 60.109 60.000 0.00 0.00 34.92 6.13
315 316 0.541063 TCACAGAGGACTAACGGCCA 60.541 55.000 2.24 0.00 0.00 5.36
316 317 0.389948 CACAGAGGACTAACGGCCAC 60.390 60.000 2.24 0.00 0.00 5.01
318 319 1.303888 AGAGGACTAACGGCCACGA 60.304 57.895 2.24 0.00 44.60 4.35
319 320 1.153881 GAGGACTAACGGCCACGAC 60.154 63.158 2.24 0.00 44.60 4.34
320 321 1.593296 GAGGACTAACGGCCACGACT 61.593 60.000 2.24 0.00 44.60 4.18
321 322 1.183676 AGGACTAACGGCCACGACTT 61.184 55.000 2.24 0.00 44.60 3.01
322 323 0.320160 GGACTAACGGCCACGACTTT 60.320 55.000 2.24 0.00 44.60 2.66
323 324 0.788391 GACTAACGGCCACGACTTTG 59.212 55.000 2.24 0.00 44.60 2.77
324 325 0.390124 ACTAACGGCCACGACTTTGA 59.610 50.000 2.24 0.00 44.60 2.69
325 326 0.788391 CTAACGGCCACGACTTTGAC 59.212 55.000 2.24 0.00 44.60 3.18
326 327 0.104487 TAACGGCCACGACTTTGACA 59.896 50.000 2.24 0.00 44.60 3.58
327 328 1.157870 AACGGCCACGACTTTGACAG 61.158 55.000 2.24 0.00 44.60 3.51
328 329 2.946762 GGCCACGACTTTGACAGC 59.053 61.111 0.00 0.00 0.00 4.40
329 330 1.891919 GGCCACGACTTTGACAGCA 60.892 57.895 0.00 0.00 0.00 4.41
330 331 1.571460 GCCACGACTTTGACAGCAG 59.429 57.895 0.00 0.00 0.00 4.24
331 332 1.571460 CCACGACTTTGACAGCAGC 59.429 57.895 0.00 0.00 0.00 5.25
332 333 1.202568 CACGACTTTGACAGCAGCG 59.797 57.895 0.00 0.00 0.00 5.18
333 334 1.227263 ACGACTTTGACAGCAGCGT 60.227 52.632 0.00 0.00 0.00 5.07
334 335 0.031585 ACGACTTTGACAGCAGCGTA 59.968 50.000 0.00 0.00 0.00 4.42
335 336 1.136690 CGACTTTGACAGCAGCGTAA 58.863 50.000 0.00 0.00 0.00 3.18
336 337 1.525197 CGACTTTGACAGCAGCGTAAA 59.475 47.619 0.00 0.00 0.00 2.01
337 338 2.033236 CGACTTTGACAGCAGCGTAAAA 60.033 45.455 0.00 0.00 0.00 1.52
338 339 3.545228 CGACTTTGACAGCAGCGTAAAAA 60.545 43.478 0.00 1.76 0.00 1.94
339 340 4.537015 GACTTTGACAGCAGCGTAAAAAT 58.463 39.130 0.00 0.00 0.00 1.82
340 341 4.537015 ACTTTGACAGCAGCGTAAAAATC 58.463 39.130 0.00 0.00 0.00 2.17
341 342 3.552604 TTGACAGCAGCGTAAAAATCC 57.447 42.857 0.00 0.00 0.00 3.01
342 343 1.810151 TGACAGCAGCGTAAAAATCCC 59.190 47.619 0.00 0.00 0.00 3.85
343 344 2.084546 GACAGCAGCGTAAAAATCCCT 58.915 47.619 0.00 0.00 0.00 4.20
344 345 1.812571 ACAGCAGCGTAAAAATCCCTG 59.187 47.619 0.00 0.00 0.00 4.45
345 346 1.812571 CAGCAGCGTAAAAATCCCTGT 59.187 47.619 0.00 0.00 0.00 4.00
346 347 2.228822 CAGCAGCGTAAAAATCCCTGTT 59.771 45.455 0.00 0.00 0.00 3.16
347 348 2.228822 AGCAGCGTAAAAATCCCTGTTG 59.771 45.455 0.00 0.00 0.00 3.33
348 349 2.595386 CAGCGTAAAAATCCCTGTTGC 58.405 47.619 0.00 0.00 0.00 4.17
349 350 2.228822 CAGCGTAAAAATCCCTGTTGCT 59.771 45.455 0.00 0.00 0.00 3.91
350 351 2.228822 AGCGTAAAAATCCCTGTTGCTG 59.771 45.455 0.00 0.00 0.00 4.41
351 352 2.030274 GCGTAAAAATCCCTGTTGCTGT 60.030 45.455 0.00 0.00 0.00 4.40
352 353 3.564511 CGTAAAAATCCCTGTTGCTGTG 58.435 45.455 0.00 0.00 0.00 3.66
353 354 3.252215 CGTAAAAATCCCTGTTGCTGTGA 59.748 43.478 0.00 0.00 0.00 3.58
354 355 4.261405 CGTAAAAATCCCTGTTGCTGTGAA 60.261 41.667 0.00 0.00 0.00 3.18
355 356 4.751767 AAAAATCCCTGTTGCTGTGAAA 57.248 36.364 0.00 0.00 0.00 2.69
356 357 4.961438 AAAATCCCTGTTGCTGTGAAAT 57.039 36.364 0.00 0.00 0.00 2.17
357 358 4.525912 AAATCCCTGTTGCTGTGAAATC 57.474 40.909 0.00 0.00 0.00 2.17
358 359 1.522668 TCCCTGTTGCTGTGAAATCG 58.477 50.000 0.00 0.00 0.00 3.34
359 360 1.202758 TCCCTGTTGCTGTGAAATCGT 60.203 47.619 0.00 0.00 0.00 3.73
360 361 1.069022 CCCTGTTGCTGTGAAATCGTG 60.069 52.381 0.00 0.00 0.00 4.35
361 362 1.664016 CCTGTTGCTGTGAAATCGTGC 60.664 52.381 0.00 0.00 0.00 5.34
362 363 0.041400 TGTTGCTGTGAAATCGTGCG 60.041 50.000 0.00 0.00 0.00 5.34
363 364 0.725784 GTTGCTGTGAAATCGTGCGG 60.726 55.000 0.00 0.00 0.00 5.69
364 365 2.202349 GCTGTGAAATCGTGCGGC 60.202 61.111 0.00 0.00 0.00 6.53
365 366 2.480555 CTGTGAAATCGTGCGGCC 59.519 61.111 0.00 0.00 0.00 6.13
366 367 2.281139 TGTGAAATCGTGCGGCCA 60.281 55.556 2.24 0.00 0.00 5.36
367 368 2.175811 GTGAAATCGTGCGGCCAC 59.824 61.111 2.24 0.00 38.62 5.01
368 369 2.281139 TGAAATCGTGCGGCCACA 60.281 55.556 2.24 0.00 42.17 4.17
369 370 1.894282 TGAAATCGTGCGGCCACAA 60.894 52.632 2.24 0.00 42.17 3.33
370 371 1.442017 GAAATCGTGCGGCCACAAC 60.442 57.895 2.24 0.00 42.17 3.32
371 372 2.123988 GAAATCGTGCGGCCACAACA 62.124 55.000 2.24 0.00 42.17 3.33
372 373 2.400896 AAATCGTGCGGCCACAACAC 62.401 55.000 2.24 4.22 42.17 3.32
373 374 4.840005 TCGTGCGGCCACAACACA 62.840 61.111 2.24 0.00 42.17 3.72
374 375 4.605967 CGTGCGGCCACAACACAC 62.606 66.667 2.24 0.00 42.17 3.82
375 376 4.605967 GTGCGGCCACAACACACG 62.606 66.667 2.24 0.00 41.67 4.49
397 398 4.794648 CCGCGAATGCCCCTGGAA 62.795 66.667 8.23 0.00 38.08 3.53
398 399 2.516930 CGCGAATGCCCCTGGAAT 60.517 61.111 0.00 0.00 38.08 3.01
399 400 2.837883 CGCGAATGCCCCTGGAATG 61.838 63.158 0.00 0.00 38.08 2.67
400 401 2.492773 GCGAATGCCCCTGGAATGG 61.493 63.158 0.00 0.00 33.98 3.16
406 407 3.093835 CCCCTGGAATGGCGGGTA 61.094 66.667 0.00 0.00 36.18 3.69
407 408 2.192175 CCCTGGAATGGCGGGTAC 59.808 66.667 0.00 0.00 33.16 3.34
408 409 2.375345 CCCTGGAATGGCGGGTACT 61.375 63.158 0.00 0.00 33.16 2.73
409 410 1.146263 CCTGGAATGGCGGGTACTC 59.854 63.158 0.00 0.00 0.00 2.59
410 411 1.338136 CCTGGAATGGCGGGTACTCT 61.338 60.000 0.00 0.00 0.00 3.24
411 412 1.410004 CTGGAATGGCGGGTACTCTA 58.590 55.000 0.00 0.00 0.00 2.43
412 413 1.068741 CTGGAATGGCGGGTACTCTAC 59.931 57.143 0.00 0.00 0.00 2.59
460 461 7.099764 ACACCTACTTCAAGATAGACAACATG 58.900 38.462 0.00 0.00 0.00 3.21
482 483 2.029560 TCATCACTATGATCCGCTGCTC 60.030 50.000 0.00 0.00 37.20 4.26
523 524 1.838112 CCTTGCTCAAATAGGGCACA 58.162 50.000 0.00 0.00 35.62 4.57
524 525 1.474077 CCTTGCTCAAATAGGGCACAC 59.526 52.381 0.00 0.00 35.62 3.82
536 537 2.317040 AGGGCACACATAGTATACGCT 58.683 47.619 0.00 0.00 0.00 5.07
548 549 0.736636 TATACGCTCTGTCGTGTGGG 59.263 55.000 7.68 0.00 43.21 4.61
557 558 2.165167 CTGTCGTGTGGGTAAGGTCTA 58.835 52.381 0.00 0.00 0.00 2.59
589 590 4.479619 AGATTAACGTCGTGTACCAGAAC 58.520 43.478 0.00 0.00 0.00 3.01
601 602 1.267121 ACCAGAACGACTGTATGCCT 58.733 50.000 11.71 0.00 44.40 4.75
612 613 5.128171 ACGACTGTATGCCTAATGGTTAAGA 59.872 40.000 0.00 0.00 35.27 2.10
621 622 7.775053 TGCCTAATGGTTAAGAAATGAAAGT 57.225 32.000 0.00 0.00 35.27 2.66
670 671 3.409570 GAACCTGGAACTTTGAGGGTAC 58.590 50.000 0.00 0.00 0.00 3.34
691 692 4.180723 ACCCTCCAACCCTATTTAGTTCA 58.819 43.478 0.00 0.00 0.00 3.18
766 767 7.652727 TCATCTGATTGAACTAAGTAGGATCG 58.347 38.462 0.00 0.00 0.00 3.69
767 768 6.392625 TCTGATTGAACTAAGTAGGATCGG 57.607 41.667 0.00 0.00 0.00 4.18
800 801 7.386059 CCTAAAGGTTTCAAATTTACATGCCT 58.614 34.615 0.00 0.00 0.00 4.75
897 900 1.062587 GCGGCGCTATATATGGCTTTG 59.937 52.381 26.86 8.69 31.46 2.77
926 929 4.927978 ACTGTGATTCTAATCCTCCTCG 57.072 45.455 0.41 0.00 34.50 4.63
949 952 1.144093 TGGTCTTTCCGTCCATGGTTT 59.856 47.619 12.58 0.00 39.52 3.27
989 1001 1.384191 GTCCCCAGCCACAGGAAAT 59.616 57.895 0.00 0.00 0.00 2.17
1011 1023 2.628106 CGATACATGCAGCCACGC 59.372 61.111 0.00 0.00 0.00 5.34
1585 1597 2.443390 CGTACCCGGACCATCCCT 60.443 66.667 0.73 0.00 31.13 4.20
1648 1660 2.433664 GCGTGTGACCGGTTAGGG 60.434 66.667 9.42 0.00 46.96 3.53
1654 1666 1.979308 TGTGACCGGTTAGGGAATTCA 59.021 47.619 9.42 0.00 46.96 2.57
1655 1667 2.574369 TGTGACCGGTTAGGGAATTCAT 59.426 45.455 9.42 0.00 46.96 2.57
1656 1668 3.009695 TGTGACCGGTTAGGGAATTCATT 59.990 43.478 9.42 0.00 46.96 2.57
1657 1669 4.014406 GTGACCGGTTAGGGAATTCATTT 58.986 43.478 9.42 0.00 46.96 2.32
1658 1670 4.461431 GTGACCGGTTAGGGAATTCATTTT 59.539 41.667 9.42 0.00 46.96 1.82
1659 1671 5.047590 GTGACCGGTTAGGGAATTCATTTTT 60.048 40.000 9.42 0.00 46.96 1.94
1684 1696 5.699097 TTTGTTTTGAGAATCCGTTAGGG 57.301 39.130 0.00 0.00 38.33 3.53
1722 1734 6.139048 TCTCGATTGAATGTACGTAATGGA 57.861 37.500 0.00 0.00 0.00 3.41
1723 1735 6.566141 TCTCGATTGAATGTACGTAATGGAA 58.434 36.000 0.00 0.00 0.00 3.53
1724 1736 6.474427 TCTCGATTGAATGTACGTAATGGAAC 59.526 38.462 0.00 0.00 0.00 3.62
1741 1793 3.119388 TGGAACATAGTACCACGTAGCAC 60.119 47.826 0.00 0.00 0.00 4.40
1752 1804 0.621609 ACGTAGCACTCCTCTCTCCT 59.378 55.000 0.00 0.00 0.00 3.69
1754 1806 1.687563 GTAGCACTCCTCTCTCCTCC 58.312 60.000 0.00 0.00 0.00 4.30
1755 1807 1.214424 GTAGCACTCCTCTCTCCTCCT 59.786 57.143 0.00 0.00 0.00 3.69
1756 1808 1.602440 AGCACTCCTCTCTCCTCCTA 58.398 55.000 0.00 0.00 0.00 2.94
1757 1809 2.143602 AGCACTCCTCTCTCCTCCTAT 58.856 52.381 0.00 0.00 0.00 2.57
1758 1810 2.158475 AGCACTCCTCTCTCCTCCTATG 60.158 54.545 0.00 0.00 0.00 2.23
1760 1812 3.689858 GCACTCCTCTCTCCTCCTATGAA 60.690 52.174 0.00 0.00 0.00 2.57
1761 1813 3.888930 CACTCCTCTCTCCTCCTATGAAC 59.111 52.174 0.00 0.00 0.00 3.18
1762 1814 3.146066 CTCCTCTCTCCTCCTATGAACG 58.854 54.545 0.00 0.00 0.00 3.95
1774 1826 4.793071 TCCTATGAACGTTTTTACGACGA 58.207 39.130 0.46 0.00 42.82 4.20
1801 1853 2.360350 CCACACGATGGGCAGCTT 60.360 61.111 0.00 0.00 45.95 3.74
2032 2084 3.254411 TGAATTGTGGTTTAGAATGCGCA 59.746 39.130 14.96 14.96 0.00 6.09
2034 2086 1.164411 TGTGGTTTAGAATGCGCAGG 58.836 50.000 18.32 0.00 0.00 4.85
2053 2105 5.227805 CGCAGGTTGTAATTTGAAATCATCG 59.772 40.000 0.00 0.00 0.00 3.84
2118 2170 6.035327 GCAGCTTGCTTTTAACCTGATAAATG 59.965 38.462 0.00 0.00 40.96 2.32
2143 2195 3.743208 TGTGGCACGAACACATGG 58.257 55.556 13.77 0.00 43.35 3.66
2147 2199 1.586028 GGCACGAACACATGGCAAT 59.414 52.632 0.00 0.00 40.91 3.56
2186 2238 7.864307 ATAACAAGTTTAGTGACACGAGTAC 57.136 36.000 0.00 0.00 0.00 2.73
2187 2239 5.252969 ACAAGTTTAGTGACACGAGTACA 57.747 39.130 0.00 0.00 0.00 2.90
2192 2244 2.882927 AGTGACACGAGTACAGCAAA 57.117 45.000 0.00 0.00 0.00 3.68
2208 2260 8.413229 AGTACAGCAAATTTAGTTGTCAAACAT 58.587 29.630 11.31 0.00 38.88 2.71
2210 2262 7.264221 ACAGCAAATTTAGTTGTCAAACATGA 58.736 30.769 0.00 0.00 38.88 3.07
2229 2281 4.829064 TGACAACTTTCTTTTCGGATGG 57.171 40.909 0.00 0.00 0.00 3.51
2230 2282 3.004315 TGACAACTTTCTTTTCGGATGGC 59.996 43.478 0.00 0.00 0.00 4.40
2237 2289 5.300792 ACTTTCTTTTCGGATGGCAAGTTTA 59.699 36.000 0.00 0.00 0.00 2.01
2268 2320 4.835284 TTGGGCTTGTTTTTCTTTTCCT 57.165 36.364 0.00 0.00 0.00 3.36
2271 2323 4.712337 TGGGCTTGTTTTTCTTTTCCTACA 59.288 37.500 0.00 0.00 0.00 2.74
2275 2327 6.592220 GGCTTGTTTTTCTTTTCCTACAACAA 59.408 34.615 0.00 0.00 33.02 2.83
2276 2328 7.279981 GGCTTGTTTTTCTTTTCCTACAACAAT 59.720 33.333 0.00 0.00 33.45 2.71
2277 2329 8.328146 GCTTGTTTTTCTTTTCCTACAACAATC 58.672 33.333 0.00 0.00 33.45 2.67
2314 2366 2.033294 TGCCCGTGCATTGCTACA 59.967 55.556 10.49 0.00 44.23 2.74
2315 2367 2.039974 TGCCCGTGCATTGCTACAG 61.040 57.895 10.49 0.00 44.23 2.74
2323 2375 2.096496 GTGCATTGCTACAGGCTACAAG 59.904 50.000 10.49 0.00 42.39 3.16
2324 2376 2.027285 TGCATTGCTACAGGCTACAAGA 60.027 45.455 10.49 0.00 42.39 3.02
2334 2386 6.642950 GCTACAGGCTACAAGACATATAAGTG 59.357 42.308 0.00 0.00 38.06 3.16
2357 2409 8.023128 AGTGAATGAAACAAATAATGGAGAACG 58.977 33.333 0.00 0.00 0.00 3.95
2361 2413 6.898041 TGAAACAAATAATGGAGAACGTCAG 58.102 36.000 0.00 0.00 0.00 3.51
2365 2417 4.819105 AATAATGGAGAACGTCAGGTCA 57.181 40.909 0.00 0.00 36.28 4.02
2366 2418 5.359194 AATAATGGAGAACGTCAGGTCAT 57.641 39.130 0.00 0.00 36.28 3.06
2380 2432 4.830046 GTCAGGTCATAGCTCATTCCTCTA 59.170 45.833 0.00 0.00 0.00 2.43
2383 2435 5.022787 AGGTCATAGCTCATTCCTCTATCC 58.977 45.833 0.00 0.00 0.00 2.59
2386 2438 6.838612 GGTCATAGCTCATTCCTCTATCCTAT 59.161 42.308 0.00 0.00 0.00 2.57
2391 2443 4.142271 GCTCATTCCTCTATCCTATGTCCG 60.142 50.000 0.00 0.00 0.00 4.79
2397 2449 2.152016 TCTATCCTATGTCCGAGCGTG 58.848 52.381 0.00 0.00 0.00 5.34
2398 2450 1.880675 CTATCCTATGTCCGAGCGTGT 59.119 52.381 0.00 0.00 0.00 4.49
2399 2451 1.112113 ATCCTATGTCCGAGCGTGTT 58.888 50.000 0.00 0.00 0.00 3.32
2400 2452 0.454600 TCCTATGTCCGAGCGTGTTC 59.545 55.000 0.00 0.00 0.00 3.18
2401 2453 0.172578 CCTATGTCCGAGCGTGTTCA 59.827 55.000 0.00 0.00 0.00 3.18
2402 2454 1.550065 CTATGTCCGAGCGTGTTCAG 58.450 55.000 0.00 0.00 0.00 3.02
2403 2455 0.885879 TATGTCCGAGCGTGTTCAGT 59.114 50.000 0.00 0.00 0.00 3.41
2404 2456 0.667487 ATGTCCGAGCGTGTTCAGTG 60.667 55.000 0.00 0.00 0.00 3.66
2405 2457 2.022129 GTCCGAGCGTGTTCAGTGG 61.022 63.158 0.00 0.00 0.00 4.00
2406 2458 2.738521 CCGAGCGTGTTCAGTGGG 60.739 66.667 0.00 0.00 0.00 4.61
2407 2459 2.029073 CGAGCGTGTTCAGTGGGT 59.971 61.111 0.00 0.00 0.00 4.51
2432 2484 3.705579 CCCAAAATTCAGCCCATATGTGA 59.294 43.478 1.24 0.00 0.00 3.58
2451 2503 2.108970 GAGGGAGGAATACGGTTGTCT 58.891 52.381 0.00 0.00 0.00 3.41
2462 2514 1.278238 CGGTTGTCTGAACTATCCGC 58.722 55.000 0.00 0.00 31.41 5.54
2463 2515 1.135083 CGGTTGTCTGAACTATCCGCT 60.135 52.381 0.00 0.00 31.41 5.52
2480 2532 3.379057 TCCGCTATGTTATCTCGAACACA 59.621 43.478 0.00 0.00 41.93 3.72
2492 2544 1.084935 CGAACACACGGTCCAACACA 61.085 55.000 0.00 0.00 0.00 3.72
2497 2549 2.255316 CACACGGTCCAACACAAAAAC 58.745 47.619 0.00 0.00 0.00 2.43
2509 2561 1.977129 CACAAAAACCCCACCCATGAT 59.023 47.619 0.00 0.00 0.00 2.45
2532 2584 7.394923 TGATACACCCTTTTATTTTCCAATCGT 59.605 33.333 0.00 0.00 0.00 3.73
2549 2601 1.069823 TCGTACCCTGCCGTTTAAACA 59.930 47.619 18.07 0.00 0.00 2.83
2569 2621 1.831580 ACATTTCTTGCTGGAGCTCC 58.168 50.000 26.78 26.78 42.66 4.70
2572 2624 0.326264 TTTCTTGCTGGAGCTCCCTC 59.674 55.000 29.95 20.58 42.66 4.30
2583 2635 2.357075 GAGCTCCCTCCTTTAAAACCG 58.643 52.381 0.87 0.00 31.68 4.44
2590 2642 3.560453 CCCTCCTTTAAAACCGGATGACA 60.560 47.826 9.46 0.00 0.00 3.58
2593 2645 3.150767 CCTTTAAAACCGGATGACACCA 58.849 45.455 9.46 0.00 0.00 4.17
2607 2659 3.176411 TGACACCATCTCTCCTTCACAT 58.824 45.455 0.00 0.00 0.00 3.21
2615 2667 4.966965 TCTCTCCTTCACATCGTACTTC 57.033 45.455 0.00 0.00 0.00 3.01
2620 2672 2.618053 CTTCACATCGTACTTCCCCAC 58.382 52.381 0.00 0.00 0.00 4.61
2624 2676 0.179119 CATCGTACTTCCCCACGGAC 60.179 60.000 0.00 0.00 38.14 4.79
2627 2679 2.681064 TACTTCCCCACGGACCGG 60.681 66.667 20.00 0.00 38.14 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.003442 ACCTCCTGGCCAGCATCTA 59.997 57.895 28.39 8.39 36.63 1.98
1 2 2.285969 ACCTCCTGGCCAGCATCT 60.286 61.111 28.39 6.31 36.63 2.90
2 3 2.191641 GACCTCCTGGCCAGCATC 59.808 66.667 28.39 16.43 36.63 3.91
3 4 3.790437 CGACCTCCTGGCCAGCAT 61.790 66.667 28.39 11.60 36.63 3.79
6 7 4.154347 GAGCGACCTCCTGGCCAG 62.154 72.222 26.87 26.87 36.63 4.85
11 12 4.200283 GAGCCGAGCGACCTCCTG 62.200 72.222 0.00 0.00 34.49 3.86
36 37 4.200283 CTCCTCCCGTGCTCTCGC 62.200 72.222 0.00 0.00 0.00 5.03
37 38 1.595993 TTTCTCCTCCCGTGCTCTCG 61.596 60.000 0.00 0.00 0.00 4.04
38 39 0.608640 TTTTCTCCTCCCGTGCTCTC 59.391 55.000 0.00 0.00 0.00 3.20
39 40 0.610687 CTTTTCTCCTCCCGTGCTCT 59.389 55.000 0.00 0.00 0.00 4.09
40 41 0.391793 CCTTTTCTCCTCCCGTGCTC 60.392 60.000 0.00 0.00 0.00 4.26
41 42 1.679898 CCTTTTCTCCTCCCGTGCT 59.320 57.895 0.00 0.00 0.00 4.40
42 43 1.377333 CCCTTTTCTCCTCCCGTGC 60.377 63.158 0.00 0.00 0.00 5.34
43 44 0.690762 TTCCCTTTTCTCCTCCCGTG 59.309 55.000 0.00 0.00 0.00 4.94
44 45 0.984995 CTTCCCTTTTCTCCTCCCGT 59.015 55.000 0.00 0.00 0.00 5.28
45 46 0.253327 CCTTCCCTTTTCTCCTCCCG 59.747 60.000 0.00 0.00 0.00 5.14
46 47 0.626382 CCCTTCCCTTTTCTCCTCCC 59.374 60.000 0.00 0.00 0.00 4.30
47 48 0.626382 CCCCTTCCCTTTTCTCCTCC 59.374 60.000 0.00 0.00 0.00 4.30
48 49 0.626382 CCCCCTTCCCTTTTCTCCTC 59.374 60.000 0.00 0.00 0.00 3.71
49 50 2.806566 CCCCCTTCCCTTTTCTCCT 58.193 57.895 0.00 0.00 0.00 3.69
78 79 4.767255 CCTGGTCTCCACTGCGCC 62.767 72.222 4.18 0.00 0.00 6.53
79 80 4.767255 CCCTGGTCTCCACTGCGC 62.767 72.222 0.00 0.00 0.00 6.09
80 81 4.087892 CCCCTGGTCTCCACTGCG 62.088 72.222 0.00 0.00 0.00 5.18
81 82 2.607750 TCCCCTGGTCTCCACTGC 60.608 66.667 0.00 0.00 0.00 4.40
82 83 1.992277 CCTCCCCTGGTCTCCACTG 60.992 68.421 0.00 0.00 0.00 3.66
83 84 2.174876 CTCCTCCCCTGGTCTCCACT 62.175 65.000 0.00 0.00 0.00 4.00
84 85 1.687493 CTCCTCCCCTGGTCTCCAC 60.687 68.421 0.00 0.00 0.00 4.02
85 86 2.780693 CTCCTCCCCTGGTCTCCA 59.219 66.667 0.00 0.00 0.00 3.86
86 87 2.041405 CCTCCTCCCCTGGTCTCC 60.041 72.222 0.00 0.00 0.00 3.71
87 88 2.766229 GCCTCCTCCCCTGGTCTC 60.766 72.222 0.00 0.00 0.00 3.36
88 89 4.787280 CGCCTCCTCCCCTGGTCT 62.787 72.222 0.00 0.00 0.00 3.85
100 101 4.214327 CTTCTCGAGCCCCGCCTC 62.214 72.222 7.81 0.00 38.37 4.70
102 103 4.821589 CACTTCTCGAGCCCCGCC 62.822 72.222 7.81 0.00 38.37 6.13
103 104 4.821589 CCACTTCTCGAGCCCCGC 62.822 72.222 7.81 0.00 38.37 6.13
104 105 3.068691 TCCACTTCTCGAGCCCCG 61.069 66.667 7.81 0.00 40.25 5.73
105 106 2.726351 CCTCCACTTCTCGAGCCCC 61.726 68.421 7.81 0.00 0.00 5.80
106 107 2.726351 CCCTCCACTTCTCGAGCCC 61.726 68.421 7.81 0.00 0.00 5.19
107 108 1.045911 ATCCCTCCACTTCTCGAGCC 61.046 60.000 7.81 0.00 0.00 4.70
108 109 0.827368 AATCCCTCCACTTCTCGAGC 59.173 55.000 7.81 0.00 0.00 5.03
109 110 1.137872 CCAATCCCTCCACTTCTCGAG 59.862 57.143 5.93 5.93 0.00 4.04
110 111 1.195115 CCAATCCCTCCACTTCTCGA 58.805 55.000 0.00 0.00 0.00 4.04
111 112 0.462759 GCCAATCCCTCCACTTCTCG 60.463 60.000 0.00 0.00 0.00 4.04
112 113 0.915364 AGCCAATCCCTCCACTTCTC 59.085 55.000 0.00 0.00 0.00 2.87
113 114 0.622665 CAGCCAATCCCTCCACTTCT 59.377 55.000 0.00 0.00 0.00 2.85
114 115 1.034292 GCAGCCAATCCCTCCACTTC 61.034 60.000 0.00 0.00 0.00 3.01
115 116 1.000396 GCAGCCAATCCCTCCACTT 60.000 57.895 0.00 0.00 0.00 3.16
116 117 1.504275 AAGCAGCCAATCCCTCCACT 61.504 55.000 0.00 0.00 0.00 4.00
117 118 1.000396 AAGCAGCCAATCCCTCCAC 60.000 57.895 0.00 0.00 0.00 4.02
118 119 1.000521 CAAGCAGCCAATCCCTCCA 60.001 57.895 0.00 0.00 0.00 3.86
119 120 1.755783 CCAAGCAGCCAATCCCTCC 60.756 63.158 0.00 0.00 0.00 4.30
120 121 0.750911 CTCCAAGCAGCCAATCCCTC 60.751 60.000 0.00 0.00 0.00 4.30
121 122 1.210204 TCTCCAAGCAGCCAATCCCT 61.210 55.000 0.00 0.00 0.00 4.20
122 123 1.034292 GTCTCCAAGCAGCCAATCCC 61.034 60.000 0.00 0.00 0.00 3.85
123 124 1.372087 CGTCTCCAAGCAGCCAATCC 61.372 60.000 0.00 0.00 0.00 3.01
124 125 0.391661 TCGTCTCCAAGCAGCCAATC 60.392 55.000 0.00 0.00 0.00 2.67
125 126 0.036732 TTCGTCTCCAAGCAGCCAAT 59.963 50.000 0.00 0.00 0.00 3.16
126 127 0.036732 ATTCGTCTCCAAGCAGCCAA 59.963 50.000 0.00 0.00 0.00 4.52
127 128 0.674581 CATTCGTCTCCAAGCAGCCA 60.675 55.000 0.00 0.00 0.00 4.75
128 129 1.372087 CCATTCGTCTCCAAGCAGCC 61.372 60.000 0.00 0.00 0.00 4.85
129 130 1.372087 CCCATTCGTCTCCAAGCAGC 61.372 60.000 0.00 0.00 0.00 5.25
130 131 0.250234 TCCCATTCGTCTCCAAGCAG 59.750 55.000 0.00 0.00 0.00 4.24
131 132 0.911769 ATCCCATTCGTCTCCAAGCA 59.088 50.000 0.00 0.00 0.00 3.91
132 133 1.672881 CAATCCCATTCGTCTCCAAGC 59.327 52.381 0.00 0.00 0.00 4.01
133 134 2.292267 CCAATCCCATTCGTCTCCAAG 58.708 52.381 0.00 0.00 0.00 3.61
134 135 1.064758 CCCAATCCCATTCGTCTCCAA 60.065 52.381 0.00 0.00 0.00 3.53
135 136 0.546122 CCCAATCCCATTCGTCTCCA 59.454 55.000 0.00 0.00 0.00 3.86
136 137 0.179018 CCCCAATCCCATTCGTCTCC 60.179 60.000 0.00 0.00 0.00 3.71
137 138 0.179018 CCCCCAATCCCATTCGTCTC 60.179 60.000 0.00 0.00 0.00 3.36
138 139 1.922821 CCCCCAATCCCATTCGTCT 59.077 57.895 0.00 0.00 0.00 4.18
139 140 1.828224 GCCCCCAATCCCATTCGTC 60.828 63.158 0.00 0.00 0.00 4.20
140 141 0.991355 TAGCCCCCAATCCCATTCGT 60.991 55.000 0.00 0.00 0.00 3.85
141 142 0.250901 CTAGCCCCCAATCCCATTCG 60.251 60.000 0.00 0.00 0.00 3.34
142 143 0.113190 CCTAGCCCCCAATCCCATTC 59.887 60.000 0.00 0.00 0.00 2.67
143 144 0.630478 ACCTAGCCCCCAATCCCATT 60.630 55.000 0.00 0.00 0.00 3.16
144 145 0.630478 AACCTAGCCCCCAATCCCAT 60.630 55.000 0.00 0.00 0.00 4.00
145 146 0.853586 AAACCTAGCCCCCAATCCCA 60.854 55.000 0.00 0.00 0.00 4.37
146 147 0.338467 AAAACCTAGCCCCCAATCCC 59.662 55.000 0.00 0.00 0.00 3.85
147 148 1.006639 TGAAAACCTAGCCCCCAATCC 59.993 52.381 0.00 0.00 0.00 3.01
148 149 2.100197 GTGAAAACCTAGCCCCCAATC 58.900 52.381 0.00 0.00 0.00 2.67
149 150 1.273041 GGTGAAAACCTAGCCCCCAAT 60.273 52.381 0.00 0.00 0.00 3.16
150 151 0.113580 GGTGAAAACCTAGCCCCCAA 59.886 55.000 0.00 0.00 0.00 4.12
151 152 1.771646 GGTGAAAACCTAGCCCCCA 59.228 57.895 0.00 0.00 0.00 4.96
152 153 1.378119 CGGTGAAAACCTAGCCCCC 60.378 63.158 0.00 0.00 0.00 5.40
153 154 2.044555 GCGGTGAAAACCTAGCCCC 61.045 63.158 0.00 0.00 0.00 5.80
154 155 2.396157 CGCGGTGAAAACCTAGCCC 61.396 63.158 0.00 0.00 0.00 5.19
155 156 3.035576 GCGCGGTGAAAACCTAGCC 62.036 63.158 8.83 0.00 0.00 3.93
156 157 2.479198 GCGCGGTGAAAACCTAGC 59.521 61.111 8.83 0.00 0.00 3.42
157 158 2.396157 GGGCGCGGTGAAAACCTAG 61.396 63.158 8.83 0.00 0.00 3.02
158 159 1.543065 TAGGGCGCGGTGAAAACCTA 61.543 55.000 8.83 0.36 0.00 3.08
159 160 2.886134 TAGGGCGCGGTGAAAACCT 61.886 57.895 8.83 1.49 0.00 3.50
160 161 2.358984 TAGGGCGCGGTGAAAACC 60.359 61.111 8.83 0.00 0.00 3.27
161 162 2.865308 GTAGGGCGCGGTGAAAAC 59.135 61.111 8.83 0.00 0.00 2.43
162 163 2.510064 ATCGTAGGGCGCGGTGAAAA 62.510 55.000 8.83 0.00 41.07 2.29
163 164 2.894240 GATCGTAGGGCGCGGTGAAA 62.894 60.000 8.83 0.00 41.07 2.69
164 165 3.420214 GATCGTAGGGCGCGGTGAA 62.420 63.158 8.83 0.00 41.07 3.18
165 166 3.896133 GATCGTAGGGCGCGGTGA 61.896 66.667 8.83 0.00 41.07 4.02
166 167 4.944372 GGATCGTAGGGCGCGGTG 62.944 72.222 8.83 0.00 41.07 4.94
168 169 4.647615 CTGGATCGTAGGGCGCGG 62.648 72.222 8.83 0.00 41.07 6.46
170 171 4.971125 GGCTGGATCGTAGGGCGC 62.971 72.222 0.00 0.00 41.07 6.53
171 172 4.301027 GGGCTGGATCGTAGGGCG 62.301 72.222 0.00 0.00 43.01 6.13
172 173 3.942439 GGGGCTGGATCGTAGGGC 61.942 72.222 0.00 0.00 0.00 5.19
173 174 2.445845 TGGGGCTGGATCGTAGGG 60.446 66.667 0.00 0.00 0.00 3.53
174 175 2.822399 GTGGGGCTGGATCGTAGG 59.178 66.667 0.00 0.00 0.00 3.18
175 176 2.417516 CGTGGGGCTGGATCGTAG 59.582 66.667 0.00 0.00 0.00 3.51
176 177 3.845259 GCGTGGGGCTGGATCGTA 61.845 66.667 0.00 0.00 39.11 3.43
192 193 1.448717 GGGTGAGAAAGCGAGAGGC 60.449 63.158 0.00 0.00 44.05 4.70
193 194 0.108424 CTGGGTGAGAAAGCGAGAGG 60.108 60.000 0.00 0.00 34.30 3.69
194 195 0.108424 CCTGGGTGAGAAAGCGAGAG 60.108 60.000 0.00 0.00 34.30 3.20
195 196 0.541998 TCCTGGGTGAGAAAGCGAGA 60.542 55.000 0.00 0.00 34.30 4.04
196 197 0.390472 GTCCTGGGTGAGAAAGCGAG 60.390 60.000 0.00 0.00 32.38 5.03
197 198 1.671742 GTCCTGGGTGAGAAAGCGA 59.328 57.895 0.00 0.00 0.00 4.93
198 199 1.738099 CGTCCTGGGTGAGAAAGCG 60.738 63.158 0.00 0.00 0.00 4.68
199 200 2.035442 GCGTCCTGGGTGAGAAAGC 61.035 63.158 0.00 0.00 0.00 3.51
200 201 0.951040 GTGCGTCCTGGGTGAGAAAG 60.951 60.000 0.00 0.00 0.00 2.62
201 202 1.070786 GTGCGTCCTGGGTGAGAAA 59.929 57.895 0.00 0.00 0.00 2.52
202 203 2.741092 GTGCGTCCTGGGTGAGAA 59.259 61.111 0.00 0.00 0.00 2.87
203 204 3.680786 CGTGCGTCCTGGGTGAGA 61.681 66.667 0.00 0.00 0.00 3.27
221 222 1.079405 AGTGTATTGGTGCGTCCCG 60.079 57.895 0.00 0.00 34.77 5.14
222 223 1.024579 CCAGTGTATTGGTGCGTCCC 61.025 60.000 0.00 0.00 33.38 4.46
223 224 1.024579 CCCAGTGTATTGGTGCGTCC 61.025 60.000 0.00 0.00 36.45 4.79
224 225 1.644786 GCCCAGTGTATTGGTGCGTC 61.645 60.000 0.00 0.00 36.45 5.19
225 226 1.674322 GCCCAGTGTATTGGTGCGT 60.674 57.895 0.00 0.00 36.45 5.24
226 227 2.406616 GGCCCAGTGTATTGGTGCG 61.407 63.158 0.00 0.00 36.11 5.34
227 228 2.052104 GGGCCCAGTGTATTGGTGC 61.052 63.158 19.95 0.00 36.45 5.01
228 229 1.748879 CGGGCCCAGTGTATTGGTG 60.749 63.158 24.92 0.00 36.45 4.17
229 230 0.910566 TACGGGCCCAGTGTATTGGT 60.911 55.000 24.92 10.64 36.45 3.67
230 231 0.179056 CTACGGGCCCAGTGTATTGG 60.179 60.000 24.92 3.98 38.00 3.16
231 232 0.828022 TCTACGGGCCCAGTGTATTG 59.172 55.000 24.92 4.83 0.00 1.90
232 233 0.828677 GTCTACGGGCCCAGTGTATT 59.171 55.000 24.92 0.75 0.00 1.89
233 234 0.324923 TGTCTACGGGCCCAGTGTAT 60.325 55.000 24.92 1.40 0.00 2.29
234 235 0.324923 ATGTCTACGGGCCCAGTGTA 60.325 55.000 24.92 15.10 0.00 2.90
235 236 1.198759 AATGTCTACGGGCCCAGTGT 61.199 55.000 24.92 14.71 0.00 3.55
236 237 0.035439 AAATGTCTACGGGCCCAGTG 60.035 55.000 24.92 8.33 0.00 3.66
237 238 0.035439 CAAATGTCTACGGGCCCAGT 60.035 55.000 24.92 22.32 0.00 4.00
238 239 0.251916 TCAAATGTCTACGGGCCCAG 59.748 55.000 24.92 17.36 0.00 4.45
239 240 0.251916 CTCAAATGTCTACGGGCCCA 59.748 55.000 24.92 0.93 0.00 5.36
240 241 0.463833 CCTCAAATGTCTACGGGCCC 60.464 60.000 13.57 13.57 0.00 5.80
241 242 1.095807 GCCTCAAATGTCTACGGGCC 61.096 60.000 0.00 0.00 32.86 5.80
242 243 1.095807 GGCCTCAAATGTCTACGGGC 61.096 60.000 0.00 0.00 37.61 6.13
243 244 0.463833 GGGCCTCAAATGTCTACGGG 60.464 60.000 0.84 0.00 0.00 5.28
244 245 0.251916 TGGGCCTCAAATGTCTACGG 59.748 55.000 4.53 0.00 0.00 4.02
245 246 1.369625 GTGGGCCTCAAATGTCTACG 58.630 55.000 4.53 0.00 0.00 3.51
246 247 1.682087 GGGTGGGCCTCAAATGTCTAC 60.682 57.143 4.53 0.00 34.45 2.59
247 248 0.623723 GGGTGGGCCTCAAATGTCTA 59.376 55.000 4.53 0.00 34.45 2.59
248 249 1.384191 GGGTGGGCCTCAAATGTCT 59.616 57.895 4.53 0.00 34.45 3.41
249 250 2.046285 CGGGTGGGCCTCAAATGTC 61.046 63.158 4.53 0.00 34.45 3.06
250 251 2.035626 CGGGTGGGCCTCAAATGT 59.964 61.111 4.53 0.00 34.45 2.71
251 252 2.035626 ACGGGTGGGCCTCAAATG 59.964 61.111 4.53 0.00 34.45 2.32
252 253 1.863155 ATGACGGGTGGGCCTCAAAT 61.863 55.000 4.53 0.00 34.45 2.32
253 254 2.534396 ATGACGGGTGGGCCTCAAA 61.534 57.895 4.53 0.00 34.45 2.69
254 255 2.933287 ATGACGGGTGGGCCTCAA 60.933 61.111 4.53 0.00 34.45 3.02
255 256 3.716195 CATGACGGGTGGGCCTCA 61.716 66.667 4.53 0.00 34.45 3.86
256 257 4.489771 CCATGACGGGTGGGCCTC 62.490 72.222 4.53 0.00 32.98 4.70
258 259 4.796495 GTCCATGACGGGTGGGCC 62.796 72.222 0.00 0.00 35.30 5.80
259 260 3.561120 TTGTCCATGACGGGTGGGC 62.561 63.158 0.00 1.21 41.73 5.36
260 261 1.377202 CTTGTCCATGACGGGTGGG 60.377 63.158 0.00 0.00 37.34 4.61
261 262 1.377202 CCTTGTCCATGACGGGTGG 60.377 63.158 0.00 0.00 34.95 4.61
262 263 0.036164 TTCCTTGTCCATGACGGGTG 59.964 55.000 0.00 0.00 34.95 4.61
263 264 0.324943 CTTCCTTGTCCATGACGGGT 59.675 55.000 0.00 0.00 34.95 5.28
264 265 1.026718 GCTTCCTTGTCCATGACGGG 61.027 60.000 0.00 0.00 34.95 5.28
265 266 0.321564 TGCTTCCTTGTCCATGACGG 60.322 55.000 0.00 0.00 34.95 4.79
266 267 1.522668 TTGCTTCCTTGTCCATGACG 58.477 50.000 0.00 0.00 34.95 4.35
267 268 3.068024 TGTTTTGCTTCCTTGTCCATGAC 59.932 43.478 0.00 0.00 0.00 3.06
268 269 3.295093 TGTTTTGCTTCCTTGTCCATGA 58.705 40.909 0.00 0.00 0.00 3.07
269 270 3.731652 TGTTTTGCTTCCTTGTCCATG 57.268 42.857 0.00 0.00 0.00 3.66
270 271 4.751767 TTTGTTTTGCTTCCTTGTCCAT 57.248 36.364 0.00 0.00 0.00 3.41
271 272 4.161189 TCATTTGTTTTGCTTCCTTGTCCA 59.839 37.500 0.00 0.00 0.00 4.02
272 273 4.692228 TCATTTGTTTTGCTTCCTTGTCC 58.308 39.130 0.00 0.00 0.00 4.02
273 274 5.351458 ACTCATTTGTTTTGCTTCCTTGTC 58.649 37.500 0.00 0.00 0.00 3.18
274 275 5.105392 TGACTCATTTGTTTTGCTTCCTTGT 60.105 36.000 0.00 0.00 0.00 3.16
275 276 5.232838 GTGACTCATTTGTTTTGCTTCCTTG 59.767 40.000 0.00 0.00 0.00 3.61
276 277 5.105392 TGTGACTCATTTGTTTTGCTTCCTT 60.105 36.000 0.00 0.00 0.00 3.36
277 278 4.402155 TGTGACTCATTTGTTTTGCTTCCT 59.598 37.500 0.00 0.00 0.00 3.36
278 279 4.681744 TGTGACTCATTTGTTTTGCTTCC 58.318 39.130 0.00 0.00 0.00 3.46
279 280 5.581605 TCTGTGACTCATTTGTTTTGCTTC 58.418 37.500 0.00 0.00 0.00 3.86
280 281 5.450965 CCTCTGTGACTCATTTGTTTTGCTT 60.451 40.000 0.00 0.00 0.00 3.91
281 282 4.037208 CCTCTGTGACTCATTTGTTTTGCT 59.963 41.667 0.00 0.00 0.00 3.91
282 283 4.036734 TCCTCTGTGACTCATTTGTTTTGC 59.963 41.667 0.00 0.00 0.00 3.68
283 284 5.297776 AGTCCTCTGTGACTCATTTGTTTTG 59.702 40.000 0.00 0.00 41.75 2.44
284 285 5.440610 AGTCCTCTGTGACTCATTTGTTTT 58.559 37.500 0.00 0.00 41.75 2.43
285 286 5.041191 AGTCCTCTGTGACTCATTTGTTT 57.959 39.130 0.00 0.00 41.75 2.83
286 287 4.696479 AGTCCTCTGTGACTCATTTGTT 57.304 40.909 0.00 0.00 41.75 2.83
287 288 5.542779 GTTAGTCCTCTGTGACTCATTTGT 58.457 41.667 6.01 0.00 44.30 2.83
288 289 4.623167 CGTTAGTCCTCTGTGACTCATTTG 59.377 45.833 6.01 0.00 44.30 2.32
289 290 4.322049 CCGTTAGTCCTCTGTGACTCATTT 60.322 45.833 6.01 0.00 44.30 2.32
290 291 3.193691 CCGTTAGTCCTCTGTGACTCATT 59.806 47.826 6.01 0.00 44.30 2.57
291 292 2.755655 CCGTTAGTCCTCTGTGACTCAT 59.244 50.000 6.01 0.00 44.30 2.90
292 293 2.160205 CCGTTAGTCCTCTGTGACTCA 58.840 52.381 6.01 0.00 44.30 3.41
293 294 1.135344 GCCGTTAGTCCTCTGTGACTC 60.135 57.143 6.01 0.00 44.30 3.36
294 295 0.889306 GCCGTTAGTCCTCTGTGACT 59.111 55.000 7.52 7.52 46.90 3.41
295 296 0.108756 GGCCGTTAGTCCTCTGTGAC 60.109 60.000 0.00 0.00 35.43 3.67
296 297 0.541063 TGGCCGTTAGTCCTCTGTGA 60.541 55.000 0.00 0.00 0.00 3.58
297 298 0.389948 GTGGCCGTTAGTCCTCTGTG 60.390 60.000 0.00 0.00 0.00 3.66
298 299 1.874345 CGTGGCCGTTAGTCCTCTGT 61.874 60.000 0.00 0.00 0.00 3.41
299 300 1.153823 CGTGGCCGTTAGTCCTCTG 60.154 63.158 0.00 0.00 0.00 3.35
300 301 1.303888 TCGTGGCCGTTAGTCCTCT 60.304 57.895 0.00 0.00 35.01 3.69
301 302 1.153881 GTCGTGGCCGTTAGTCCTC 60.154 63.158 0.00 0.00 35.01 3.71
302 303 1.183676 AAGTCGTGGCCGTTAGTCCT 61.184 55.000 0.00 0.00 35.01 3.85
303 304 0.320160 AAAGTCGTGGCCGTTAGTCC 60.320 55.000 0.00 0.00 35.01 3.85
304 305 0.788391 CAAAGTCGTGGCCGTTAGTC 59.212 55.000 0.00 0.00 35.01 2.59
305 306 0.390124 TCAAAGTCGTGGCCGTTAGT 59.610 50.000 0.00 0.00 35.01 2.24
306 307 0.788391 GTCAAAGTCGTGGCCGTTAG 59.212 55.000 0.00 0.00 35.01 2.34
307 308 0.104487 TGTCAAAGTCGTGGCCGTTA 59.896 50.000 0.00 0.00 35.01 3.18
308 309 1.153329 TGTCAAAGTCGTGGCCGTT 60.153 52.632 0.00 0.00 35.01 4.44
309 310 1.594293 CTGTCAAAGTCGTGGCCGT 60.594 57.895 0.00 0.00 35.01 5.68
310 311 2.954753 GCTGTCAAAGTCGTGGCCG 61.955 63.158 0.00 0.00 0.00 6.13
311 312 1.845809 CTGCTGTCAAAGTCGTGGCC 61.846 60.000 0.00 0.00 0.00 5.36
312 313 1.571460 CTGCTGTCAAAGTCGTGGC 59.429 57.895 0.00 0.00 0.00 5.01
313 314 1.571460 GCTGCTGTCAAAGTCGTGG 59.429 57.895 0.00 0.00 0.00 4.94
314 315 1.202568 CGCTGCTGTCAAAGTCGTG 59.797 57.895 0.00 0.00 0.00 4.35
315 316 0.031585 TACGCTGCTGTCAAAGTCGT 59.968 50.000 0.00 0.00 34.55 4.34
316 317 1.136690 TTACGCTGCTGTCAAAGTCG 58.863 50.000 0.00 0.00 0.00 4.18
317 318 3.602390 TTTTACGCTGCTGTCAAAGTC 57.398 42.857 0.00 0.00 0.00 3.01
318 319 4.537015 GATTTTTACGCTGCTGTCAAAGT 58.463 39.130 0.00 0.00 0.00 2.66
319 320 3.914364 GGATTTTTACGCTGCTGTCAAAG 59.086 43.478 0.00 0.00 0.00 2.77
320 321 3.305064 GGGATTTTTACGCTGCTGTCAAA 60.305 43.478 0.00 0.00 0.00 2.69
321 322 2.227865 GGGATTTTTACGCTGCTGTCAA 59.772 45.455 0.00 0.00 0.00 3.18
322 323 1.810151 GGGATTTTTACGCTGCTGTCA 59.190 47.619 0.00 0.00 0.00 3.58
323 324 2.084546 AGGGATTTTTACGCTGCTGTC 58.915 47.619 0.00 0.00 0.00 3.51
324 325 1.812571 CAGGGATTTTTACGCTGCTGT 59.187 47.619 0.00 0.00 40.30 4.40
325 326 2.549633 CAGGGATTTTTACGCTGCTG 57.450 50.000 0.00 0.00 40.30 4.41
329 330 2.228822 CAGCAACAGGGATTTTTACGCT 59.771 45.455 0.00 0.00 0.00 5.07
330 331 2.030274 ACAGCAACAGGGATTTTTACGC 60.030 45.455 0.00 0.00 0.00 4.42
331 332 3.252215 TCACAGCAACAGGGATTTTTACG 59.748 43.478 0.00 0.00 0.00 3.18
332 333 4.846779 TCACAGCAACAGGGATTTTTAC 57.153 40.909 0.00 0.00 0.00 2.01
333 334 5.860941 TTTCACAGCAACAGGGATTTTTA 57.139 34.783 0.00 0.00 0.00 1.52
334 335 4.751767 TTTCACAGCAACAGGGATTTTT 57.248 36.364 0.00 0.00 0.00 1.94
335 336 4.559300 CGATTTCACAGCAACAGGGATTTT 60.559 41.667 0.00 0.00 0.00 1.82
336 337 3.057315 CGATTTCACAGCAACAGGGATTT 60.057 43.478 0.00 0.00 0.00 2.17
337 338 2.489329 CGATTTCACAGCAACAGGGATT 59.511 45.455 0.00 0.00 0.00 3.01
338 339 2.086869 CGATTTCACAGCAACAGGGAT 58.913 47.619 0.00 0.00 0.00 3.85
339 340 1.202758 ACGATTTCACAGCAACAGGGA 60.203 47.619 0.00 0.00 0.00 4.20
340 341 1.069022 CACGATTTCACAGCAACAGGG 60.069 52.381 0.00 0.00 0.00 4.45
341 342 1.664016 GCACGATTTCACAGCAACAGG 60.664 52.381 0.00 0.00 0.00 4.00
342 343 1.678360 GCACGATTTCACAGCAACAG 58.322 50.000 0.00 0.00 0.00 3.16
343 344 0.041400 CGCACGATTTCACAGCAACA 60.041 50.000 0.00 0.00 0.00 3.33
344 345 0.725784 CCGCACGATTTCACAGCAAC 60.726 55.000 0.00 0.00 0.00 4.17
345 346 1.573932 CCGCACGATTTCACAGCAA 59.426 52.632 0.00 0.00 0.00 3.91
346 347 2.965147 GCCGCACGATTTCACAGCA 61.965 57.895 0.00 0.00 0.00 4.41
347 348 2.202349 GCCGCACGATTTCACAGC 60.202 61.111 0.00 0.00 0.00 4.40
348 349 2.324330 TGGCCGCACGATTTCACAG 61.324 57.895 0.00 0.00 0.00 3.66
349 350 2.281139 TGGCCGCACGATTTCACA 60.281 55.556 0.00 0.00 0.00 3.58
350 351 2.123988 TTGTGGCCGCACGATTTCAC 62.124 55.000 21.09 0.00 0.00 3.18
351 352 1.894282 TTGTGGCCGCACGATTTCA 60.894 52.632 21.09 0.00 0.00 2.69
352 353 1.442017 GTTGTGGCCGCACGATTTC 60.442 57.895 21.09 1.88 0.00 2.17
353 354 2.190170 TGTTGTGGCCGCACGATTT 61.190 52.632 21.09 0.00 0.00 2.17
354 355 2.593148 TGTTGTGGCCGCACGATT 60.593 55.556 21.09 0.00 0.00 3.34
355 356 3.353836 GTGTTGTGGCCGCACGAT 61.354 61.111 21.09 0.00 0.00 3.73
356 357 4.840005 TGTGTTGTGGCCGCACGA 62.840 61.111 21.09 5.26 36.04 4.35
357 358 4.605967 GTGTGTTGTGGCCGCACG 62.606 66.667 21.09 0.00 36.04 5.34
358 359 4.605967 CGTGTGTTGTGGCCGCAC 62.606 66.667 21.09 14.77 39.38 5.34
380 381 4.794648 TTCCAGGGGCATTCGCGG 62.795 66.667 6.13 0.00 39.92 6.46
381 382 2.516930 ATTCCAGGGGCATTCGCG 60.517 61.111 0.00 0.00 39.92 5.87
382 383 2.492773 CCATTCCAGGGGCATTCGC 61.493 63.158 0.00 0.00 37.44 4.70
383 384 3.846180 CCATTCCAGGGGCATTCG 58.154 61.111 0.00 0.00 0.00 3.34
391 392 1.146263 GAGTACCCGCCATTCCAGG 59.854 63.158 0.00 0.00 0.00 4.45
392 393 1.068741 GTAGAGTACCCGCCATTCCAG 59.931 57.143 0.00 0.00 0.00 3.86
393 394 1.117150 GTAGAGTACCCGCCATTCCA 58.883 55.000 0.00 0.00 0.00 3.53
394 395 0.391966 GGTAGAGTACCCGCCATTCC 59.608 60.000 0.00 0.00 43.18 3.01
395 396 3.982709 GGTAGAGTACCCGCCATTC 57.017 57.895 0.00 0.00 43.18 2.67
404 405 9.075678 TCTAACATATAAAGCCTGGTAGAGTAC 57.924 37.037 0.00 0.00 34.98 2.73
405 406 9.824216 ATCTAACATATAAAGCCTGGTAGAGTA 57.176 33.333 4.77 0.00 41.21 2.59
406 407 8.728596 ATCTAACATATAAAGCCTGGTAGAGT 57.271 34.615 4.77 0.00 41.21 3.24
434 435 7.770366 TGTTGTCTATCTTGAAGTAGGTGTA 57.230 36.000 0.00 0.00 0.00 2.90
460 461 2.064762 GCAGCGGATCATAGTGATGAC 58.935 52.381 0.00 0.00 44.90 3.06
482 483 1.367471 TGAGCCACACAGTTCCTCG 59.633 57.895 0.00 0.00 0.00 4.63
507 508 2.512692 ATGTGTGCCCTATTTGAGCA 57.487 45.000 0.00 0.00 0.00 4.26
523 524 3.875727 ACACGACAGAGCGTATACTATGT 59.124 43.478 0.56 0.00 44.43 2.29
524 525 4.212150 CACACGACAGAGCGTATACTATG 58.788 47.826 0.56 0.00 43.59 2.23
536 537 0.963962 GACCTTACCCACACGACAGA 59.036 55.000 0.00 0.00 0.00 3.41
557 558 3.695060 ACGACGTTAATCTCATCAGGTCT 59.305 43.478 0.00 0.00 0.00 3.85
589 590 5.597806 TCTTAACCATTAGGCATACAGTCG 58.402 41.667 0.00 0.00 39.06 4.18
592 593 8.450578 TCATTTCTTAACCATTAGGCATACAG 57.549 34.615 0.00 0.00 39.06 2.74
612 613 8.980143 TTTTGACGAGAAAGAAACTTTCATTT 57.020 26.923 20.97 6.00 0.00 2.32
650 651 2.107726 GGTACCCTCAAAGTTCCAGGTT 59.892 50.000 0.00 0.00 0.00 3.50
670 671 4.855298 TGAACTAAATAGGGTTGGAGGG 57.145 45.455 0.00 0.00 0.00 4.30
671 672 5.816682 ACTTGAACTAAATAGGGTTGGAGG 58.183 41.667 0.00 0.00 0.00 4.30
672 673 8.857694 TTTACTTGAACTAAATAGGGTTGGAG 57.142 34.615 0.00 0.00 0.00 3.86
673 674 9.238368 CATTTACTTGAACTAAATAGGGTTGGA 57.762 33.333 0.00 0.00 0.00 3.53
674 675 9.238368 TCATTTACTTGAACTAAATAGGGTTGG 57.762 33.333 0.00 0.00 0.00 3.77
748 749 5.661759 ACCTTCCGATCCTACTTAGTTCAAT 59.338 40.000 0.00 0.00 0.00 2.57
812 813 1.865865 CAAGTGTTCTAGTGTGCGGT 58.134 50.000 0.00 0.00 0.00 5.68
897 900 6.831976 AGGATTAGAATCACAGTTATCCCAC 58.168 40.000 4.71 0.00 37.15 4.61
926 929 0.676782 CATGGACGGAAAGACCACCC 60.677 60.000 0.00 0.00 46.67 4.61
989 1001 2.280119 GCTGCATGTATCGGGCGA 60.280 61.111 0.00 0.00 0.00 5.54
1199 1211 4.457496 AGACGAGCACCATGCCGG 62.457 66.667 0.00 0.00 46.52 6.13
1293 1305 3.764466 AGGAGCTCCAAGACGCGG 61.764 66.667 33.90 0.00 38.89 6.46
1548 1560 3.957260 CACTCCGTGCTGAACAGG 58.043 61.111 3.99 0.00 0.00 4.00
1660 1672 6.321690 TCCCTAACGGATTCTCAAAACAAAAA 59.678 34.615 0.00 0.00 34.86 1.94
1661 1673 5.828859 TCCCTAACGGATTCTCAAAACAAAA 59.171 36.000 0.00 0.00 34.86 2.44
1662 1674 5.378332 TCCCTAACGGATTCTCAAAACAAA 58.622 37.500 0.00 0.00 34.86 2.83
1663 1675 4.975631 TCCCTAACGGATTCTCAAAACAA 58.024 39.130 0.00 0.00 34.86 2.83
1664 1676 4.627284 TCCCTAACGGATTCTCAAAACA 57.373 40.909 0.00 0.00 34.86 2.83
1665 1677 6.150474 TGAATTCCCTAACGGATTCTCAAAAC 59.850 38.462 2.27 0.00 41.63 2.43
1666 1678 6.242396 TGAATTCCCTAACGGATTCTCAAAA 58.758 36.000 2.27 0.00 41.63 2.44
1667 1679 5.811190 TGAATTCCCTAACGGATTCTCAAA 58.189 37.500 2.27 0.00 41.63 2.69
1668 1680 5.429681 TGAATTCCCTAACGGATTCTCAA 57.570 39.130 2.27 0.00 41.63 3.02
1669 1681 5.630415 ATGAATTCCCTAACGGATTCTCA 57.370 39.130 2.27 0.00 41.63 3.27
1670 1682 6.651225 CCTAATGAATTCCCTAACGGATTCTC 59.349 42.308 2.27 0.00 41.63 2.87
1671 1683 6.465894 CCCTAATGAATTCCCTAACGGATTCT 60.466 42.308 2.27 0.00 41.63 2.40
1672 1684 5.705905 CCCTAATGAATTCCCTAACGGATTC 59.294 44.000 2.27 0.00 41.63 2.52
1673 1685 5.631119 CCCTAATGAATTCCCTAACGGATT 58.369 41.667 2.27 0.00 41.63 3.01
1674 1686 4.506802 GCCCTAATGAATTCCCTAACGGAT 60.507 45.833 2.27 0.00 41.63 4.18
1675 1687 3.181448 GCCCTAATGAATTCCCTAACGGA 60.181 47.826 2.27 0.00 39.68 4.69
1676 1688 3.146847 GCCCTAATGAATTCCCTAACGG 58.853 50.000 2.27 0.00 0.00 4.44
1677 1689 3.815809 TGCCCTAATGAATTCCCTAACG 58.184 45.455 2.27 0.00 0.00 3.18
1678 1690 5.635120 AGATGCCCTAATGAATTCCCTAAC 58.365 41.667 2.27 0.00 0.00 2.34
1679 1691 5.513094 CGAGATGCCCTAATGAATTCCCTAA 60.513 44.000 2.27 0.00 0.00 2.69
1680 1692 4.020218 CGAGATGCCCTAATGAATTCCCTA 60.020 45.833 2.27 0.00 0.00 3.53
1681 1693 3.244700 CGAGATGCCCTAATGAATTCCCT 60.245 47.826 2.27 0.00 0.00 4.20
1682 1694 3.077359 CGAGATGCCCTAATGAATTCCC 58.923 50.000 2.27 0.00 0.00 3.97
1683 1695 4.008074 TCGAGATGCCCTAATGAATTCC 57.992 45.455 2.27 0.00 0.00 3.01
1684 1696 5.702670 TCAATCGAGATGCCCTAATGAATTC 59.297 40.000 0.00 0.00 0.00 2.17
1685 1697 5.624159 TCAATCGAGATGCCCTAATGAATT 58.376 37.500 0.00 0.00 0.00 2.17
1686 1698 5.233083 TCAATCGAGATGCCCTAATGAAT 57.767 39.130 0.00 0.00 0.00 2.57
1687 1699 4.687901 TCAATCGAGATGCCCTAATGAA 57.312 40.909 0.00 0.00 0.00 2.57
1688 1700 4.687901 TTCAATCGAGATGCCCTAATGA 57.312 40.909 0.00 0.00 0.00 2.57
1689 1701 4.758674 ACATTCAATCGAGATGCCCTAATG 59.241 41.667 0.00 2.02 0.00 1.90
1722 1734 3.129988 GGAGTGCTACGTGGTACTATGTT 59.870 47.826 21.69 0.46 32.61 2.71
1723 1735 2.686915 GGAGTGCTACGTGGTACTATGT 59.313 50.000 21.69 9.23 32.61 2.29
1724 1736 2.950309 AGGAGTGCTACGTGGTACTATG 59.050 50.000 21.69 0.00 32.61 2.23
1725 1737 3.117963 AGAGGAGTGCTACGTGGTACTAT 60.118 47.826 21.69 13.80 32.61 2.12
1741 1793 3.146066 CGTTCATAGGAGGAGAGAGGAG 58.854 54.545 0.00 0.00 0.00 3.69
1752 1804 4.793071 TCGTCGTAAAAACGTTCATAGGA 58.207 39.130 0.00 6.44 40.86 2.94
1754 1806 5.443763 GCATTCGTCGTAAAAACGTTCATAG 59.556 40.000 0.00 0.00 40.86 2.23
1755 1807 5.307368 GCATTCGTCGTAAAAACGTTCATA 58.693 37.500 0.00 0.00 40.86 2.15
1756 1808 4.145997 GCATTCGTCGTAAAAACGTTCAT 58.854 39.130 0.00 0.00 40.86 2.57
1757 1809 3.533919 GCATTCGTCGTAAAAACGTTCA 58.466 40.909 0.00 0.00 40.86 3.18
1758 1810 2.898225 GGCATTCGTCGTAAAAACGTTC 59.102 45.455 0.00 0.00 40.86 3.95
1760 1812 1.195222 GGGCATTCGTCGTAAAAACGT 59.805 47.619 0.00 0.00 40.86 3.99
1761 1813 1.194997 TGGGCATTCGTCGTAAAAACG 59.805 47.619 0.00 0.00 41.39 3.60
1762 1814 2.846693 CTGGGCATTCGTCGTAAAAAC 58.153 47.619 0.00 0.00 0.00 2.43
1774 1826 3.286694 ATCGTGTGGGCTGGGCATT 62.287 57.895 0.00 0.00 0.00 3.56
2022 2074 4.697828 TCAAATTACAACCTGCGCATTCTA 59.302 37.500 12.24 0.00 0.00 2.10
2023 2075 3.505680 TCAAATTACAACCTGCGCATTCT 59.494 39.130 12.24 0.00 0.00 2.40
2032 2084 5.714806 ACCCGATGATTTCAAATTACAACCT 59.285 36.000 0.00 0.00 0.00 3.50
2034 2086 8.973835 TTAACCCGATGATTTCAAATTACAAC 57.026 30.769 0.00 0.00 0.00 3.32
2118 2170 2.551006 TTCGTGCCACATGTGTGCC 61.551 57.895 26.33 19.25 44.34 5.01
2128 2180 1.177895 ATTGCCATGTGTTCGTGCCA 61.178 50.000 0.00 0.00 0.00 4.92
2135 2187 4.255833 ACATTCGAAATTGCCATGTGTT 57.744 36.364 0.00 0.00 0.00 3.32
2161 2213 8.567104 TGTACTCGTGTCACTAAACTTGTTATA 58.433 33.333 0.65 0.00 0.00 0.98
2164 2216 5.653507 TGTACTCGTGTCACTAAACTTGTT 58.346 37.500 0.65 0.00 0.00 2.83
2165 2217 5.252969 TGTACTCGTGTCACTAAACTTGT 57.747 39.130 0.65 0.00 0.00 3.16
2169 2221 3.635331 TGCTGTACTCGTGTCACTAAAC 58.365 45.455 0.65 0.00 0.00 2.01
2172 2224 3.994204 TTTGCTGTACTCGTGTCACTA 57.006 42.857 0.65 0.00 0.00 2.74
2186 2238 7.697352 TCATGTTTGACAACTAAATTTGCTG 57.303 32.000 0.00 0.00 33.58 4.41
2208 2260 3.004315 GCCATCCGAAAAGAAAGTTGTCA 59.996 43.478 0.00 0.00 0.00 3.58
2210 2262 2.955660 TGCCATCCGAAAAGAAAGTTGT 59.044 40.909 0.00 0.00 0.00 3.32
2217 2269 4.825085 ACTTAAACTTGCCATCCGAAAAGA 59.175 37.500 0.00 0.00 0.00 2.52
2218 2270 5.121221 ACTTAAACTTGCCATCCGAAAAG 57.879 39.130 0.00 0.00 0.00 2.27
2275 2327 8.808092 GGGCATTCTACTAGTTACATCTAAGAT 58.192 37.037 0.00 0.00 0.00 2.40
2276 2328 7.040617 CGGGCATTCTACTAGTTACATCTAAGA 60.041 40.741 0.00 0.00 0.00 2.10
2277 2329 7.085116 CGGGCATTCTACTAGTTACATCTAAG 58.915 42.308 0.00 0.00 0.00 2.18
2314 2366 8.023021 TCATTCACTTATATGTCTTGTAGCCT 57.977 34.615 0.00 0.00 0.00 4.58
2315 2367 8.662781 TTCATTCACTTATATGTCTTGTAGCC 57.337 34.615 0.00 0.00 0.00 3.93
2334 2386 8.020819 TGACGTTCTCCATTATTTGTTTCATTC 58.979 33.333 0.00 0.00 0.00 2.67
2351 2403 2.423892 TGAGCTATGACCTGACGTTCTC 59.576 50.000 0.00 0.00 0.00 2.87
2357 2409 3.640967 AGAGGAATGAGCTATGACCTGAC 59.359 47.826 6.71 0.00 30.08 3.51
2361 2413 5.022787 AGGATAGAGGAATGAGCTATGACC 58.977 45.833 0.00 0.00 0.00 4.02
2365 2417 6.838612 GGACATAGGATAGAGGAATGAGCTAT 59.161 42.308 0.00 0.00 0.00 2.97
2366 2418 6.191315 GGACATAGGATAGAGGAATGAGCTA 58.809 44.000 0.00 0.00 0.00 3.32
2380 2432 1.067212 GAACACGCTCGGACATAGGAT 59.933 52.381 0.00 0.00 0.00 3.24
2383 2435 1.135373 ACTGAACACGCTCGGACATAG 60.135 52.381 0.00 0.00 0.00 2.23
2386 2438 1.299850 CACTGAACACGCTCGGACA 60.300 57.895 0.00 0.00 0.00 4.02
2391 2443 1.228657 GGAACCCACTGAACACGCTC 61.229 60.000 0.00 0.00 0.00 5.03
2406 2458 1.347062 TGGGCTGAATTTTGGGGAAC 58.653 50.000 0.00 0.00 0.00 3.62
2407 2459 2.340721 ATGGGCTGAATTTTGGGGAA 57.659 45.000 0.00 0.00 0.00 3.97
2418 2470 1.427809 CTCCCTCACATATGGGCTGA 58.572 55.000 7.80 1.02 43.04 4.26
2432 2484 1.831736 CAGACAACCGTATTCCTCCCT 59.168 52.381 0.00 0.00 0.00 4.20
2438 2490 4.738740 CGGATAGTTCAGACAACCGTATTC 59.261 45.833 0.00 0.00 35.19 1.75
2442 2494 1.403780 GCGGATAGTTCAGACAACCGT 60.404 52.381 0.00 0.00 38.87 4.83
2443 2495 1.135083 AGCGGATAGTTCAGACAACCG 60.135 52.381 0.00 0.00 39.28 4.44
2451 2503 5.704053 TCGAGATAACATAGCGGATAGTTCA 59.296 40.000 0.00 0.00 0.00 3.18
2462 2514 4.669318 ACCGTGTGTTCGAGATAACATAG 58.331 43.478 0.00 0.00 41.18 2.23
2463 2515 4.439153 GGACCGTGTGTTCGAGATAACATA 60.439 45.833 0.00 0.00 41.18 2.29
2480 2532 0.818938 GGGTTTTTGTGTTGGACCGT 59.181 50.000 0.00 0.00 0.00 4.83
2492 2544 3.169908 GTGTATCATGGGTGGGGTTTTT 58.830 45.455 0.00 0.00 0.00 1.94
2497 2549 0.993509 AGGGTGTATCATGGGTGGGG 60.994 60.000 0.00 0.00 0.00 4.96
2509 2561 7.121020 GGTACGATTGGAAAATAAAAGGGTGTA 59.879 37.037 0.00 0.00 0.00 2.90
2532 2584 2.928334 TGTTGTTTAAACGGCAGGGTA 58.072 42.857 13.45 0.00 0.00 3.69
2549 2601 2.165998 GGAGCTCCAGCAAGAAATGTT 58.834 47.619 28.43 0.00 45.16 2.71
2569 2621 3.439129 GTGTCATCCGGTTTTAAAGGAGG 59.561 47.826 0.00 1.32 37.49 4.30
2572 2624 3.150767 TGGTGTCATCCGGTTTTAAAGG 58.849 45.455 0.00 0.00 0.00 3.11
2590 2642 2.461695 ACGATGTGAAGGAGAGATGGT 58.538 47.619 0.00 0.00 0.00 3.55
2593 2645 4.339814 GGAAGTACGATGTGAAGGAGAGAT 59.660 45.833 0.00 0.00 0.00 2.75
2607 2659 1.978617 GGTCCGTGGGGAAGTACGA 60.979 63.158 0.00 0.00 46.08 3.43
2620 2672 2.112815 GGGAATTCTTGCCGGTCCG 61.113 63.158 3.60 3.60 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.