Multiple sequence alignment - TraesCS5A01G177900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G177900 chr5A 100.000 5050 0 0 1 5050 375553680 375548631 0.000000e+00 9326.0
1 TraesCS5A01G177900 chr5A 90.385 156 5 5 1382 1537 375377034 375376889 3.990000e-46 196.0
2 TraesCS5A01G177900 chr5A 100.000 44 0 0 1310 1353 375377081 375377038 1.170000e-11 82.4
3 TraesCS5A01G177900 chr5D 91.531 2279 97 32 2268 4499 283343532 283341303 0.000000e+00 3051.0
4 TraesCS5A01G177900 chr5D 91.980 1197 72 9 441 1630 283345274 283344095 0.000000e+00 1657.0
5 TraesCS5A01G177900 chr5D 95.183 436 18 1 1626 2061 283343961 283343529 0.000000e+00 686.0
6 TraesCS5A01G177900 chr5D 88.528 462 38 6 1 448 283345887 283345427 3.440000e-151 545.0
7 TraesCS5A01G177900 chr5D 88.564 411 44 2 4643 5050 283226740 283226330 3.510000e-136 496.0
8 TraesCS5A01G177900 chr5D 92.857 322 19 3 2756 3073 283108212 283107891 9.900000e-127 464.0
9 TraesCS5A01G177900 chr5D 87.010 408 49 3 4644 5050 273956490 273956894 1.660000e-124 457.0
10 TraesCS5A01G177900 chr5D 89.218 371 18 3 4108 4459 283107815 283107448 1.290000e-120 444.0
11 TraesCS5A01G177900 chr5D 86.098 410 52 4 4643 5050 474314759 474315165 2.160000e-118 436.0
12 TraesCS5A01G177900 chr5D 91.447 152 12 1 3618 3769 223647550 223647700 1.840000e-49 207.0
13 TraesCS5A01G177900 chr5D 93.182 88 6 0 3678 3765 505561061 505561148 4.100000e-26 130.0
14 TraesCS5A01G177900 chr5D 100.000 69 0 0 3149 3217 283107886 283107818 1.480000e-25 128.0
15 TraesCS5A01G177900 chr5D 87.838 74 9 0 4502 4575 283104341 283104268 2.500000e-13 87.9
16 TraesCS5A01G177900 chr5B 93.632 1743 72 10 1626 3344 321532759 321531032 0.000000e+00 2567.0
17 TraesCS5A01G177900 chr5B 92.921 1229 53 8 3301 4499 321531029 321529805 0.000000e+00 1757.0
18 TraesCS5A01G177900 chr5B 94.087 964 46 5 669 1630 321533856 321532902 0.000000e+00 1454.0
19 TraesCS5A01G177900 chr5B 95.449 835 31 2 3007 3835 321471738 321470905 0.000000e+00 1325.0
20 TraesCS5A01G177900 chr5B 91.053 380 20 4 2563 2930 321472182 321471805 7.550000e-138 501.0
21 TraesCS5A01G177900 chr5B 97.863 234 5 0 3375 3608 321467926 321467693 6.090000e-109 405.0
22 TraesCS5A01G177900 chr5B 84.597 409 39 15 1445 1846 321474404 321474013 7.930000e-103 385.0
23 TraesCS5A01G177900 chr5B 94.675 169 9 0 3825 3993 321470487 321470319 3.880000e-66 263.0
24 TraesCS5A01G177900 chr5B 95.968 124 5 0 3646 3769 249075194 249075071 8.570000e-48 202.0
25 TraesCS5A01G177900 chr5B 93.600 125 6 2 2347 2470 321474004 321473881 8.630000e-43 185.0
26 TraesCS5A01G177900 chr5B 91.667 96 5 1 4364 4459 321465018 321464926 4.100000e-26 130.0
27 TraesCS5A01G177900 chr5B 89.583 96 6 4 4492 4585 321529487 321529394 8.880000e-23 119.0
28 TraesCS5A01G177900 chr5B 85.470 117 7 2 1320 1426 321474512 321474396 4.130000e-21 113.0
29 TraesCS5A01G177900 chr5B 95.588 68 3 0 4582 4649 34060354 34060287 5.350000e-20 110.0
30 TraesCS5A01G177900 chr5B 94.872 39 2 0 2459 2497 321472221 321472183 1.520000e-05 62.1
31 TraesCS5A01G177900 chr6A 89.487 409 42 1 4643 5050 449241326 449241734 2.700000e-142 516.0
32 TraesCS5A01G177900 chr3D 87.531 409 50 1 4643 5050 528983373 528982965 5.920000e-129 472.0
33 TraesCS5A01G177900 chr3D 86.301 73 9 1 4492 4563 590501153 590501225 1.510000e-10 78.7
34 TraesCS5A01G177900 chr1D 87.909 397 47 1 4655 5050 282253682 282253286 2.750000e-127 466.0
35 TraesCS5A01G177900 chr1D 90.323 62 6 0 4502 4563 367846312 367846373 1.170000e-11 82.4
36 TraesCS5A01G177900 chr1D 84.932 73 11 0 4502 4574 286098198 286098270 1.950000e-09 75.0
37 TraesCS5A01G177900 chr1B 85.854 410 55 3 4643 5050 135534757 135534349 2.790000e-117 433.0
38 TraesCS5A01G177900 chr4B 85.158 411 59 1 4642 5050 465342327 465341917 2.170000e-113 420.0
39 TraesCS5A01G177900 chr4B 82.927 82 11 3 4484 4564 666327554 666327633 2.520000e-08 71.3
40 TraesCS5A01G177900 chr7D 84.915 411 60 1 4642 5050 439522640 439522230 1.010000e-111 414.0
41 TraesCS5A01G177900 chr7D 85.333 75 9 2 4492 4564 204870831 204870757 5.420000e-10 76.8
42 TraesCS5A01G177900 chr4A 95.588 68 3 0 4582 4649 633735614 633735547 5.350000e-20 110.0
43 TraesCS5A01G177900 chr7B 94.286 70 4 0 4578 4647 479501154 479501085 1.920000e-19 108.0
44 TraesCS5A01G177900 chrUn 95.455 66 3 0 4582 4647 86514215 86514280 6.910000e-19 106.0
45 TraesCS5A01G177900 chrUn 95.455 66 3 0 4582 4647 170988366 170988431 6.910000e-19 106.0
46 TraesCS5A01G177900 chrUn 95.455 66 3 0 4582 4647 171050352 171050287 6.910000e-19 106.0
47 TraesCS5A01G177900 chrUn 95.455 66 3 0 4582 4647 189399107 189399042 6.910000e-19 106.0
48 TraesCS5A01G177900 chrUn 95.455 66 3 0 4582 4647 217890738 217890803 6.910000e-19 106.0
49 TraesCS5A01G177900 chrUn 95.455 66 3 0 4582 4647 264057872 264057937 6.910000e-19 106.0
50 TraesCS5A01G177900 chr6B 86.486 74 9 1 4492 4564 445854295 445854368 4.190000e-11 80.5
51 TraesCS5A01G177900 chr7A 85.333 75 9 2 4492 4564 216831226 216831152 5.420000e-10 76.8
52 TraesCS5A01G177900 chr7A 82.609 69 6 5 4511 4576 718263422 718263357 7.060000e-04 56.5
53 TraesCS5A01G177900 chr3B 82.895 76 11 2 4502 4576 648742336 648742262 3.260000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G177900 chr5A 375548631 375553680 5049 True 9326.000000 9326 100.000000 1 5050 1 chr5A.!!$R1 5049
1 TraesCS5A01G177900 chr5D 283341303 283345887 4584 True 1484.750000 3051 91.805500 1 4499 4 chr5D.!!$R3 4498
2 TraesCS5A01G177900 chr5D 283104268 283108212 3944 True 280.975000 464 92.478250 2756 4575 4 chr5D.!!$R2 1819
3 TraesCS5A01G177900 chr5B 321529394 321533856 4462 True 1474.250000 2567 92.555750 669 4585 4 chr5B.!!$R4 3916
4 TraesCS5A01G177900 chr5B 321464926 321474512 9586 True 374.344444 1325 92.138444 1320 4459 9 chr5B.!!$R3 3139

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
212 214 0.109086 CTTCTCGATGCCGACACTGT 60.109 55.000 0.0 0.0 40.30 3.55 F
1181 1371 0.246360 TGTTCACGATCTGATGCGGT 59.754 50.000 0.0 0.0 0.00 5.68 F
1190 1380 0.321564 TCTGATGCGGTTTGAGGTGG 60.322 55.000 0.0 0.0 0.00 4.61 F
2174 2525 0.108615 CTTCCACACTACTCTGGCGG 60.109 60.000 0.0 0.0 0.00 6.13 F
2216 2567 0.826062 GCAATGGGGAGGAAATGGTG 59.174 55.000 0.0 0.0 0.00 4.17 F
3917 6455 1.074775 GGTGATGCAGGTTGACCCA 59.925 57.895 0.0 0.0 36.42 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1869 2220 0.037326 ACATGTGCCACGTGTCTAGG 60.037 55.000 16.78 0.0 44.41 3.02 R
2036 2387 0.962356 CATGGACCCAAGGCAGACAC 60.962 60.000 0.00 0.0 0.00 3.67 R
2579 4608 0.973632 ACCTCACCATCTAACGCACA 59.026 50.000 0.00 0.0 0.00 4.57 R
3615 5719 0.519077 GCAACGGCTGAAGGAAGAAG 59.481 55.000 0.00 0.0 36.96 2.85 R
3938 6476 1.003718 GTACTCCCGCTGCCAGTTT 60.004 57.895 0.00 0.0 0.00 2.66 R
4989 15575 0.100861 GGTCGGTCCGAGATGAGTTC 59.899 60.000 15.95 0.0 36.23 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.445452 AGTGTACTAGCGAATTTTCCGA 57.555 40.909 0.00 0.00 0.00 4.55
47 48 7.281100 AGCGAATTTTCCGATCTCTTAATTTCT 59.719 33.333 0.00 0.00 0.00 2.52
88 90 7.589395 AGTTAATATGATGTGTGTTTTTGCGA 58.411 30.769 0.00 0.00 0.00 5.10
107 109 4.060205 GCGAGGAAGTTAAGTTTGGTGTA 58.940 43.478 0.00 0.00 0.00 2.90
130 132 7.554835 TGTATAACAGGGATTTACAATCACCAC 59.445 37.037 0.00 0.00 0.00 4.16
131 133 4.380843 ACAGGGATTTACAATCACCACA 57.619 40.909 0.00 0.00 0.00 4.17
139 141 7.224557 GGGATTTACAATCACCACATTAAATGC 59.775 37.037 0.00 0.00 0.00 3.56
156 158 9.609950 CATTAAATGCTTGGTTTGTTTTTATGG 57.390 29.630 0.00 0.00 0.00 2.74
206 208 2.946990 TGTATGTACTTCTCGATGCCGA 59.053 45.455 0.00 0.00 43.35 5.54
208 210 1.170442 TGTACTTCTCGATGCCGACA 58.830 50.000 0.00 0.00 40.30 4.35
212 214 0.109086 CTTCTCGATGCCGACACTGT 60.109 55.000 0.00 0.00 40.30 3.55
226 241 1.282817 CACTGTCGTTTGGTTGACGA 58.717 50.000 0.00 0.00 46.15 4.20
237 252 1.223187 GGTTGACGACGAACCAACAT 58.777 50.000 22.78 0.00 42.26 2.71
249 264 3.014037 CCAACATGTGGTTCCGACA 57.986 52.632 0.00 0.00 43.20 4.35
264 279 1.002366 CGACAAAGCCCTTCTCATCG 58.998 55.000 0.00 0.00 0.00 3.84
265 280 1.673033 CGACAAAGCCCTTCTCATCGT 60.673 52.381 0.00 0.00 0.00 3.73
271 286 1.945354 GCCCTTCTCATCGTCGACCA 61.945 60.000 10.58 0.00 0.00 4.02
273 288 1.137086 CCCTTCTCATCGTCGACCAAT 59.863 52.381 10.58 0.70 0.00 3.16
312 327 4.639334 CATCGGAGAAGATGTTGATGGAT 58.361 43.478 0.00 0.00 43.58 3.41
313 328 4.760530 TCGGAGAAGATGTTGATGGATT 57.239 40.909 0.00 0.00 0.00 3.01
315 330 3.812053 CGGAGAAGATGTTGATGGATTCC 59.188 47.826 0.00 0.00 0.00 3.01
330 345 0.957395 ATTCCTGCAGTTGCCTCACG 60.957 55.000 13.81 0.00 41.18 4.35
361 376 7.255590 GGAACCACTCTTGAAAATCATCAAAGA 60.256 37.037 0.00 0.00 38.75 2.52
371 386 5.904362 AAATCATCAAAGAACTGGCTACC 57.096 39.130 0.00 0.00 0.00 3.18
395 410 6.252655 CCTTTTGTGTGCAGTAGTGTTAAAAC 59.747 38.462 0.00 0.00 0.00 2.43
408 423 5.225642 AGTGTTAAAACAGGTAGTAGCGTC 58.774 41.667 0.00 0.00 40.05 5.19
430 445 7.601775 CGTCGTCTGAACTTTCTTATATGTTC 58.398 38.462 0.00 0.00 39.18 3.18
432 447 7.272948 GTCGTCTGAACTTTCTTATATGTTCGT 59.727 37.037 0.00 0.00 40.93 3.85
455 630 6.590292 CGTTCATACTCATTTACTGTCAGGTT 59.410 38.462 4.53 0.00 0.00 3.50
464 639 4.228567 TGTCAGGTTGCGGCGTGA 62.229 61.111 9.37 0.00 0.00 4.35
468 643 2.031919 AGGTTGCGGCGTGAATGA 59.968 55.556 9.37 0.00 0.00 2.57
474 649 0.319986 TGCGGCGTGAATGAGTGTTA 60.320 50.000 9.37 0.00 0.00 2.41
485 660 6.347402 CGTGAATGAGTGTTAGTTTAAGTGGG 60.347 42.308 0.00 0.00 0.00 4.61
499 674 3.692424 GTGGGTACACAAGAACCGT 57.308 52.632 0.00 0.00 46.90 4.83
503 678 1.869132 GGGTACACAAGAACCGTGAAC 59.131 52.381 0.00 0.00 37.80 3.18
511 686 4.734854 CACAAGAACCGTGAACAAGATTTG 59.265 41.667 0.00 0.00 36.43 2.32
531 706 1.869132 GCTTTTAAGTGAACGGTCCGT 59.131 47.619 12.23 12.23 43.97 4.69
532 707 2.349155 GCTTTTAAGTGAACGGTCCGTG 60.349 50.000 19.67 1.93 39.99 4.94
594 769 4.394712 GCCCGTGGTCTGTCCCAG 62.395 72.222 0.00 0.00 34.43 4.45
597 772 1.189524 CCCGTGGTCTGTCCCAGTTA 61.190 60.000 0.00 0.00 34.43 2.24
598 773 0.902531 CCGTGGTCTGTCCCAGTTAT 59.097 55.000 0.00 0.00 34.43 1.89
604 779 3.197766 TGGTCTGTCCCAGTTATAGCAAG 59.802 47.826 0.00 0.00 34.77 4.01
618 793 8.595533 CAGTTATAGCAAGCATTATGTATACCG 58.404 37.037 0.00 0.00 0.00 4.02
626 801 3.485216 GCATTATGTATACCGGAATGCGC 60.485 47.826 21.12 0.00 41.93 6.09
660 835 6.752351 TGTAATTGCGTCAACAAAAGCTTTTA 59.248 30.769 23.44 6.07 32.27 1.52
662 837 3.102276 TGCGTCAACAAAAGCTTTTACG 58.898 40.909 28.20 28.20 33.78 3.18
664 839 3.102276 CGTCAACAAAAGCTTTTACGCA 58.898 40.909 24.06 9.46 0.00 5.24
665 840 3.062124 CGTCAACAAAAGCTTTTACGCAC 60.062 43.478 24.06 17.28 0.00 5.34
667 842 3.854809 TCAACAAAAGCTTTTACGCACAC 59.145 39.130 23.44 0.00 0.00 3.82
701 876 6.402766 CCAAACTGCTGCCATTAAAAATCATG 60.403 38.462 0.00 0.00 0.00 3.07
796 974 1.677633 TCGCTCGTCCACCTGATCA 60.678 57.895 0.00 0.00 0.00 2.92
871 1049 3.517500 ACAAGAGGACAGGGAAGAATCTC 59.482 47.826 0.00 0.00 0.00 2.75
1103 1283 3.716872 TCTGTTTGTTCCTTCTTCCCTCT 59.283 43.478 0.00 0.00 0.00 3.69
1181 1371 0.246360 TGTTCACGATCTGATGCGGT 59.754 50.000 0.00 0.00 0.00 5.68
1182 1372 1.337728 TGTTCACGATCTGATGCGGTT 60.338 47.619 0.00 0.00 0.00 4.44
1183 1373 1.732259 GTTCACGATCTGATGCGGTTT 59.268 47.619 0.00 0.00 0.00 3.27
1184 1374 1.358877 TCACGATCTGATGCGGTTTG 58.641 50.000 0.00 0.00 0.00 2.93
1185 1375 1.067213 TCACGATCTGATGCGGTTTGA 60.067 47.619 0.00 0.00 0.00 2.69
1186 1376 1.325640 CACGATCTGATGCGGTTTGAG 59.674 52.381 0.00 0.00 0.00 3.02
1187 1377 0.933097 CGATCTGATGCGGTTTGAGG 59.067 55.000 0.00 0.00 0.00 3.86
1188 1378 1.740380 CGATCTGATGCGGTTTGAGGT 60.740 52.381 0.00 0.00 0.00 3.85
1189 1379 1.667724 GATCTGATGCGGTTTGAGGTG 59.332 52.381 0.00 0.00 0.00 4.00
1190 1380 0.321564 TCTGATGCGGTTTGAGGTGG 60.322 55.000 0.00 0.00 0.00 4.61
1210 1400 3.245016 TGGAACATGCATCTCAGGAAAGT 60.245 43.478 0.00 0.00 0.00 2.66
1211 1401 3.760684 GGAACATGCATCTCAGGAAAGTT 59.239 43.478 0.00 0.00 0.00 2.66
1212 1402 4.380233 GGAACATGCATCTCAGGAAAGTTG 60.380 45.833 0.00 0.00 0.00 3.16
1275 1465 0.534427 GCGTGGATTAACTAGGGGGC 60.534 60.000 0.00 0.00 0.00 5.80
1353 1553 4.404394 TCACCTGATATCTTTGTTAGGCGA 59.596 41.667 3.98 0.00 0.00 5.54
1368 1568 2.093890 AGGCGATGTGATTGATTGCAA 58.906 42.857 0.00 0.00 38.60 4.08
1372 1572 2.456989 GATGTGATTGATTGCAAGCCG 58.543 47.619 12.94 0.00 39.59 5.52
1387 1587 2.679837 CAAGCCGCACTTCTATGATTGT 59.320 45.455 0.00 0.00 36.04 2.71
1409 1613 1.889170 TGCCGTCCTGCTGATAGATAG 59.111 52.381 0.00 0.00 0.00 2.08
1410 1614 2.163509 GCCGTCCTGCTGATAGATAGA 58.836 52.381 0.00 0.00 0.00 1.98
1411 1615 2.757868 GCCGTCCTGCTGATAGATAGAT 59.242 50.000 0.00 0.00 0.00 1.98
1412 1616 3.948473 GCCGTCCTGCTGATAGATAGATA 59.052 47.826 0.00 0.00 0.00 1.98
1483 1687 5.576447 TTCTCTTTTCTGTTTCACCAACC 57.424 39.130 0.00 0.00 33.97 3.77
1493 1697 6.361433 TCTGTTTCACCAACCAATTCTAGAA 58.639 36.000 7.82 7.82 33.97 2.10
1587 1791 2.692041 GGACTTGTGTAGCGGTAGGTAT 59.308 50.000 0.00 0.00 32.50 2.73
1630 1834 3.667960 CGAAGTGGTCAATTGTAAGCAGC 60.668 47.826 5.13 0.00 0.00 5.25
1631 1835 2.862541 AGTGGTCAATTGTAAGCAGCA 58.137 42.857 5.13 0.00 0.00 4.41
1632 1836 3.221771 AGTGGTCAATTGTAAGCAGCAA 58.778 40.909 5.13 0.00 0.00 3.91
1648 1999 2.485426 CAGCAAACTGTATGTGTCCAGG 59.515 50.000 0.00 0.00 39.22 4.45
1676 2027 6.892658 TGCATTTCCTTTACTTAAGCAGAA 57.107 33.333 1.29 0.00 32.19 3.02
1678 2029 6.714810 TGCATTTCCTTTACTTAAGCAGAAGA 59.285 34.615 1.29 0.00 32.19 2.87
1804 2155 6.430925 TGTTGGAAATACTGAGAATGAGGTTG 59.569 38.462 0.00 0.00 0.00 3.77
1813 2164 3.243873 TGAGAATGAGGTTGGCGCTATAG 60.244 47.826 7.64 0.00 0.00 1.31
1848 2199 6.620678 CGAAAGGAGATTATGGCAAGAAAAA 58.379 36.000 0.00 0.00 0.00 1.94
1921 2272 6.920210 GGCAAGCCATGTTCTTAGAATATTTC 59.080 38.462 6.14 0.00 35.81 2.17
2109 2460 2.738521 CACCCTCGTCCTTGCGTG 60.739 66.667 0.00 0.00 0.00 5.34
2119 2470 1.001633 GTCCTTGCGTGTTCCTAAGGA 59.998 52.381 0.00 0.00 44.65 3.36
2120 2471 1.695242 TCCTTGCGTGTTCCTAAGGAA 59.305 47.619 0.00 0.00 44.08 3.36
2174 2525 0.108615 CTTCCACACTACTCTGGCGG 60.109 60.000 0.00 0.00 0.00 6.13
2194 2545 1.985116 GAGGAGGGAGAGGCGTTGT 60.985 63.158 0.00 0.00 0.00 3.32
2208 2559 1.308069 CGTTGTCAGCAATGGGGAGG 61.308 60.000 0.00 0.00 37.82 4.30
2216 2567 0.826062 GCAATGGGGAGGAAATGGTG 59.174 55.000 0.00 0.00 0.00 4.17
2315 2666 2.636830 CAGTGCTGTTATGGGGAGAAG 58.363 52.381 0.00 0.00 0.00 2.85
2490 4513 7.408756 TCTTTTACCAATTCTTCATGATGGG 57.591 36.000 15.12 8.21 35.44 4.00
2579 4608 2.335933 ACAGGCACAGGTTACCTTACT 58.664 47.619 0.00 0.00 0.00 2.24
2585 4614 1.690352 ACAGGTTACCTTACTGTGCGT 59.310 47.619 0.00 0.00 43.29 5.24
2624 4653 3.945285 CTCCCGCACTAATAACCATGTTT 59.055 43.478 0.00 0.00 0.00 2.83
2959 5011 7.375106 TGCTTTGTTTCAATTGTGTGATTTT 57.625 28.000 5.13 0.00 0.00 1.82
3033 5085 5.510179 CCAACTGAGCTTTGTCAATGGAAAT 60.510 40.000 0.00 0.00 36.35 2.17
3097 5149 5.934402 GGAAAGGTCCAGTATAGAAGACA 57.066 43.478 0.00 0.00 44.26 3.41
3218 5276 8.669243 GTTAATTATGCAATCATAGAGCTACCC 58.331 37.037 0.00 0.00 36.60 3.69
3306 5366 4.030134 CAAGGATTGCTGCTGATTCTTC 57.970 45.455 0.00 0.00 40.39 2.87
3310 5370 4.060900 GGATTGCTGCTGATTCTTCGATA 58.939 43.478 0.00 0.00 0.00 2.92
3615 5719 6.312399 TGGTGAAAATGTGTAGTGACATTC 57.688 37.500 0.00 0.00 44.15 2.67
3649 5753 8.397575 TCAGCCGTTGCCATTTATATTATTTA 57.602 30.769 0.00 0.00 38.69 1.40
3811 5915 1.681327 GAGACTGGGGCGGTACTCA 60.681 63.158 0.00 0.00 0.00 3.41
3859 6397 6.349363 CCATGTCAATCCATGCATAGAAGATG 60.349 42.308 0.00 0.00 40.72 2.90
3866 6404 5.061853 TCCATGCATAGAAGATGAGCTTTC 58.938 41.667 0.00 0.00 36.83 2.62
3871 6409 6.354938 TGCATAGAAGATGAGCTTTCTTGAT 58.645 36.000 15.31 7.64 36.83 2.57
3891 6429 5.195185 TGATGTGTGGCATAGATTCATTGT 58.805 37.500 0.00 0.00 38.06 2.71
3917 6455 1.074775 GGTGATGCAGGTTGACCCA 59.925 57.895 0.00 0.00 36.42 4.51
3930 6468 3.699538 GGTTGACCCAAAGAAGTTCAGTT 59.300 43.478 5.50 0.00 0.00 3.16
3938 6476 4.036734 CCAAAGAAGTTCAGTTTGCTAGCA 59.963 41.667 14.93 14.93 31.12 3.49
3950 6488 3.181367 CTAGCAAACTGGCAGCGG 58.819 61.111 15.89 5.30 35.83 5.52
4256 10091 5.505159 GCGATTTGGTGGTACTAATTAAGGC 60.505 44.000 0.00 0.00 0.00 4.35
4280 10115 5.470777 CCTGTAATTGAAGAAACAACCCGTA 59.529 40.000 0.00 0.00 32.50 4.02
4353 10205 1.548986 GTGTGTTGCAGCAACTGTTC 58.451 50.000 32.99 21.67 43.85 3.18
4481 11963 2.762887 TGCTACTAGCTGACTGCAATCT 59.237 45.455 9.49 0.00 45.94 2.40
4486 11968 1.436600 AGCTGACTGCAATCTCGTTG 58.563 50.000 7.11 0.00 45.94 4.10
4582 15168 9.914131 AAAGAAACATAAAGAATACTCCTTTGC 57.086 29.630 0.00 0.00 35.65 3.68
4583 15169 8.635765 AGAAACATAAAGAATACTCCTTTGCA 57.364 30.769 0.00 0.00 35.65 4.08
4584 15170 9.247861 AGAAACATAAAGAATACTCCTTTGCAT 57.752 29.630 0.00 0.00 35.65 3.96
4585 15171 9.508567 GAAACATAAAGAATACTCCTTTGCATC 57.491 33.333 0.00 0.00 35.65 3.91
4586 15172 8.579850 AACATAAAGAATACTCCTTTGCATCA 57.420 30.769 0.00 0.00 35.65 3.07
4587 15173 8.757982 ACATAAAGAATACTCCTTTGCATCAT 57.242 30.769 0.00 0.00 35.65 2.45
4588 15174 9.193806 ACATAAAGAATACTCCTTTGCATCATT 57.806 29.630 0.00 0.00 35.65 2.57
4589 15175 9.459640 CATAAAGAATACTCCTTTGCATCATTG 57.540 33.333 0.00 0.00 35.65 2.82
4590 15176 6.461110 AAGAATACTCCTTTGCATCATTGG 57.539 37.500 0.00 0.00 0.00 3.16
4591 15177 4.340381 AGAATACTCCTTTGCATCATTGGC 59.660 41.667 0.00 0.00 0.00 4.52
4592 15178 2.226962 ACTCCTTTGCATCATTGGCT 57.773 45.000 0.00 0.00 0.00 4.75
4593 15179 2.532843 ACTCCTTTGCATCATTGGCTT 58.467 42.857 0.00 0.00 0.00 4.35
4594 15180 2.232941 ACTCCTTTGCATCATTGGCTTG 59.767 45.455 0.00 0.00 0.00 4.01
4595 15181 1.551430 TCCTTTGCATCATTGGCTTGG 59.449 47.619 0.00 0.00 0.00 3.61
4596 15182 1.276989 CCTTTGCATCATTGGCTTGGT 59.723 47.619 0.00 0.00 0.00 3.67
4597 15183 2.613691 CTTTGCATCATTGGCTTGGTC 58.386 47.619 0.00 0.00 0.00 4.02
4598 15184 1.630223 TTGCATCATTGGCTTGGTCA 58.370 45.000 0.00 0.00 0.00 4.02
4599 15185 1.630223 TGCATCATTGGCTTGGTCAA 58.370 45.000 0.00 0.00 0.00 3.18
4600 15186 2.181125 TGCATCATTGGCTTGGTCAAT 58.819 42.857 0.00 0.00 38.47 2.57
4601 15187 2.166870 TGCATCATTGGCTTGGTCAATC 59.833 45.455 0.00 0.00 35.55 2.67
4602 15188 2.429610 GCATCATTGGCTTGGTCAATCT 59.570 45.455 0.00 0.00 35.55 2.40
4603 15189 3.118884 GCATCATTGGCTTGGTCAATCTT 60.119 43.478 0.00 0.00 35.55 2.40
4604 15190 4.622220 GCATCATTGGCTTGGTCAATCTTT 60.622 41.667 0.00 0.00 35.55 2.52
4605 15191 5.394443 GCATCATTGGCTTGGTCAATCTTTA 60.394 40.000 0.00 0.00 35.55 1.85
4606 15192 5.643379 TCATTGGCTTGGTCAATCTTTAC 57.357 39.130 0.00 0.00 35.55 2.01
4607 15193 4.155826 TCATTGGCTTGGTCAATCTTTACG 59.844 41.667 0.00 0.00 35.55 3.18
4608 15194 3.134574 TGGCTTGGTCAATCTTTACGT 57.865 42.857 0.00 0.00 0.00 3.57
4609 15195 2.811431 TGGCTTGGTCAATCTTTACGTG 59.189 45.455 0.00 0.00 0.00 4.49
4610 15196 3.071479 GGCTTGGTCAATCTTTACGTGA 58.929 45.455 0.00 0.00 0.00 4.35
4611 15197 3.120304 GGCTTGGTCAATCTTTACGTGAC 60.120 47.826 0.00 0.00 40.77 3.67
4618 15204 6.149504 GTCAATCTTTACGTGACCAACTAC 57.850 41.667 0.00 0.00 36.48 2.73
4619 15205 5.119743 GTCAATCTTTACGTGACCAACTACC 59.880 44.000 0.00 0.00 36.48 3.18
4620 15206 5.011329 TCAATCTTTACGTGACCAACTACCT 59.989 40.000 0.00 0.00 0.00 3.08
4621 15207 6.209192 TCAATCTTTACGTGACCAACTACCTA 59.791 38.462 0.00 0.00 0.00 3.08
4622 15208 6.594788 ATCTTTACGTGACCAACTACCTAA 57.405 37.500 0.00 0.00 0.00 2.69
4623 15209 6.594788 TCTTTACGTGACCAACTACCTAAT 57.405 37.500 0.00 0.00 0.00 1.73
4624 15210 7.701539 TCTTTACGTGACCAACTACCTAATA 57.298 36.000 0.00 0.00 0.00 0.98
4625 15211 7.538575 TCTTTACGTGACCAACTACCTAATAC 58.461 38.462 0.00 0.00 0.00 1.89
4626 15212 7.394359 TCTTTACGTGACCAACTACCTAATACT 59.606 37.037 0.00 0.00 0.00 2.12
4627 15213 8.574251 TTTACGTGACCAACTACCTAATACTA 57.426 34.615 0.00 0.00 0.00 1.82
4628 15214 6.442513 ACGTGACCAACTACCTAATACTAC 57.557 41.667 0.00 0.00 0.00 2.73
4629 15215 5.065218 ACGTGACCAACTACCTAATACTACG 59.935 44.000 0.00 0.00 0.00 3.51
4630 15216 5.277047 GTGACCAACTACCTAATACTACGC 58.723 45.833 0.00 0.00 0.00 4.42
4631 15217 4.949238 TGACCAACTACCTAATACTACGCA 59.051 41.667 0.00 0.00 0.00 5.24
4632 15218 5.066893 TGACCAACTACCTAATACTACGCAG 59.933 44.000 0.00 0.00 0.00 5.18
4633 15219 4.340381 ACCAACTACCTAATACTACGCAGG 59.660 45.833 0.00 0.00 0.00 4.85
4634 15220 4.296690 CAACTACCTAATACTACGCAGGC 58.703 47.826 0.00 0.00 0.00 4.85
4635 15221 3.830121 ACTACCTAATACTACGCAGGCT 58.170 45.455 0.00 0.00 0.00 4.58
4636 15222 3.819902 ACTACCTAATACTACGCAGGCTC 59.180 47.826 0.00 0.00 0.00 4.70
4637 15223 2.662866 ACCTAATACTACGCAGGCTCA 58.337 47.619 0.00 0.00 0.00 4.26
4638 15224 3.231818 ACCTAATACTACGCAGGCTCAT 58.768 45.455 0.00 0.00 0.00 2.90
4639 15225 3.256136 ACCTAATACTACGCAGGCTCATC 59.744 47.826 0.00 0.00 0.00 2.92
4640 15226 3.255888 CCTAATACTACGCAGGCTCATCA 59.744 47.826 0.00 0.00 0.00 3.07
4641 15227 3.819564 AATACTACGCAGGCTCATCAA 57.180 42.857 0.00 0.00 0.00 2.57
4642 15228 3.819564 ATACTACGCAGGCTCATCAAA 57.180 42.857 0.00 0.00 0.00 2.69
4643 15229 1.726853 ACTACGCAGGCTCATCAAAC 58.273 50.000 0.00 0.00 0.00 2.93
4644 15230 1.001974 ACTACGCAGGCTCATCAAACA 59.998 47.619 0.00 0.00 0.00 2.83
4645 15231 1.662629 CTACGCAGGCTCATCAAACAG 59.337 52.381 0.00 0.00 0.00 3.16
4646 15232 1.136147 CGCAGGCTCATCAAACAGC 59.864 57.895 0.00 0.00 34.65 4.40
4647 15233 1.579964 CGCAGGCTCATCAAACAGCA 61.580 55.000 0.00 0.00 37.38 4.41
4648 15234 0.109412 GCAGGCTCATCAAACAGCAC 60.109 55.000 0.00 0.00 37.38 4.40
4649 15235 1.241165 CAGGCTCATCAAACAGCACA 58.759 50.000 0.00 0.00 37.38 4.57
4650 15236 1.816835 CAGGCTCATCAAACAGCACAT 59.183 47.619 0.00 0.00 37.38 3.21
4651 15237 1.816835 AGGCTCATCAAACAGCACATG 59.183 47.619 0.00 0.00 37.38 3.21
4652 15238 1.135199 GGCTCATCAAACAGCACATGG 60.135 52.381 0.00 0.00 37.38 3.66
4653 15239 1.135199 GCTCATCAAACAGCACATGGG 60.135 52.381 0.00 0.00 35.56 4.00
4654 15240 2.165167 CTCATCAAACAGCACATGGGT 58.835 47.619 0.00 0.00 0.00 4.51
4655 15241 3.346315 CTCATCAAACAGCACATGGGTA 58.654 45.455 0.00 0.00 0.00 3.69
4656 15242 3.949754 CTCATCAAACAGCACATGGGTAT 59.050 43.478 0.00 0.00 0.00 2.73
4657 15243 5.109500 TCATCAAACAGCACATGGGTATA 57.891 39.130 0.00 0.00 0.00 1.47
4658 15244 5.693961 TCATCAAACAGCACATGGGTATAT 58.306 37.500 0.00 0.00 0.00 0.86
4659 15245 6.836242 TCATCAAACAGCACATGGGTATATA 58.164 36.000 0.00 0.00 0.00 0.86
4660 15246 7.460910 TCATCAAACAGCACATGGGTATATAT 58.539 34.615 0.00 0.00 0.00 0.86
4661 15247 8.601546 TCATCAAACAGCACATGGGTATATATA 58.398 33.333 0.00 0.00 0.00 0.86
4662 15248 9.399797 CATCAAACAGCACATGGGTATATATAT 57.600 33.333 0.00 0.00 0.00 0.86
4663 15249 9.618890 ATCAAACAGCACATGGGTATATATATC 57.381 33.333 0.00 0.00 0.00 1.63
4664 15250 8.825774 TCAAACAGCACATGGGTATATATATCT 58.174 33.333 0.00 0.00 0.00 1.98
4665 15251 9.453572 CAAACAGCACATGGGTATATATATCTT 57.546 33.333 0.00 0.00 0.00 2.40
4666 15252 9.453572 AAACAGCACATGGGTATATATATCTTG 57.546 33.333 0.00 4.47 0.00 3.02
4667 15253 7.050377 ACAGCACATGGGTATATATATCTTGC 58.950 38.462 0.00 7.02 0.00 4.01
4668 15254 6.201615 CAGCACATGGGTATATATATCTTGCG 59.798 42.308 0.00 0.00 0.00 4.85
4669 15255 6.098266 AGCACATGGGTATATATATCTTGCGA 59.902 38.462 0.00 0.00 0.00 5.10
4670 15256 6.201044 GCACATGGGTATATATATCTTGCGAC 59.799 42.308 0.00 0.00 0.00 5.19
4671 15257 6.701841 CACATGGGTATATATATCTTGCGACC 59.298 42.308 0.00 0.21 0.00 4.79
4672 15258 5.864418 TGGGTATATATATCTTGCGACCC 57.136 43.478 17.29 17.29 44.71 4.46
4673 15259 4.340097 TGGGTATATATATCTTGCGACCCG 59.660 45.833 18.27 0.00 46.98 5.28
4674 15260 4.340381 GGGTATATATATCTTGCGACCCGT 59.660 45.833 11.66 0.00 36.21 5.28
4675 15261 5.532406 GGGTATATATATCTTGCGACCCGTA 59.468 44.000 11.66 0.00 36.21 4.02
4676 15262 6.433766 GGTATATATATCTTGCGACCCGTAC 58.566 44.000 0.00 0.00 0.00 3.67
4677 15263 2.975410 TATATCTTGCGACCCGTACG 57.025 50.000 8.69 8.69 0.00 3.67
4678 15264 0.313043 ATATCTTGCGACCCGTACGG 59.687 55.000 27.68 27.68 37.81 4.02
4689 15275 3.902261 ACCCGTACGGTTGAAAAATTC 57.098 42.857 31.24 0.00 45.36 2.17
4690 15276 3.479489 ACCCGTACGGTTGAAAAATTCT 58.521 40.909 31.24 0.00 45.36 2.40
4691 15277 3.884693 ACCCGTACGGTTGAAAAATTCTT 59.115 39.130 31.24 0.00 45.36 2.52
4692 15278 4.023792 ACCCGTACGGTTGAAAAATTCTTC 60.024 41.667 31.24 0.00 45.36 2.87
4693 15279 4.023878 CCCGTACGGTTGAAAAATTCTTCA 60.024 41.667 31.24 0.00 33.48 3.02
4694 15280 5.505985 CCCGTACGGTTGAAAAATTCTTCAA 60.506 40.000 31.24 2.75 41.80 2.69
4695 15281 5.972382 CCGTACGGTTGAAAAATTCTTCAAA 59.028 36.000 26.39 0.00 44.66 2.69
4696 15282 6.075257 CCGTACGGTTGAAAAATTCTTCAAAC 60.075 38.462 26.39 11.55 44.66 2.93
4702 15288 6.892430 GGTTGAAAAATTCTTCAAACGTTTCG 59.108 34.615 11.37 7.31 44.66 3.46
4703 15289 7.201367 GGTTGAAAAATTCTTCAAACGTTTCGA 60.201 33.333 11.37 9.59 44.66 3.71
4704 15290 7.431215 TGAAAAATTCTTCAAACGTTTCGAG 57.569 32.000 11.37 11.73 32.39 4.04
4705 15291 5.866503 AAAATTCTTCAAACGTTTCGAGC 57.133 34.783 11.37 0.00 0.00 5.03
4706 15292 3.537793 ATTCTTCAAACGTTTCGAGCC 57.462 42.857 11.37 0.00 0.00 4.70
4707 15293 1.223187 TCTTCAAACGTTTCGAGCCC 58.777 50.000 11.37 0.00 0.00 5.19
4708 15294 0.110823 CTTCAAACGTTTCGAGCCCG 60.111 55.000 11.37 0.00 37.07 6.13
4709 15295 2.108344 TTCAAACGTTTCGAGCCCGC 62.108 55.000 11.37 0.00 35.37 6.13
4710 15296 2.589442 AAACGTTTCGAGCCCGCA 60.589 55.556 7.96 0.00 35.37 5.69
4711 15297 2.888998 AAACGTTTCGAGCCCGCAC 61.889 57.895 7.96 0.00 35.37 5.34
4721 15307 4.813235 GCCCGCACCCCATTGCTA 62.813 66.667 0.00 0.00 40.62 3.49
4722 15308 2.828549 CCCGCACCCCATTGCTAC 60.829 66.667 0.00 0.00 40.62 3.58
4723 15309 2.272146 CCGCACCCCATTGCTACT 59.728 61.111 0.00 0.00 40.62 2.57
4724 15310 2.114670 CCGCACCCCATTGCTACTG 61.115 63.158 0.00 0.00 40.62 2.74
4725 15311 2.764314 CGCACCCCATTGCTACTGC 61.764 63.158 0.00 0.00 40.62 4.40
4726 15312 2.418083 GCACCCCATTGCTACTGCC 61.418 63.158 0.00 0.00 39.59 4.85
4727 15313 1.754234 CACCCCATTGCTACTGCCC 60.754 63.158 0.00 0.00 38.71 5.36
4728 15314 2.123726 CCCCATTGCTACTGCCCC 60.124 66.667 0.00 0.00 38.71 5.80
4729 15315 2.682846 CCCATTGCTACTGCCCCA 59.317 61.111 0.00 0.00 38.71 4.96
4730 15316 1.000233 CCCATTGCTACTGCCCCAA 60.000 57.895 0.00 0.00 38.71 4.12
4731 15317 0.397535 CCCATTGCTACTGCCCCAAT 60.398 55.000 0.00 0.00 38.71 3.16
4732 15318 0.748450 CCATTGCTACTGCCCCAATG 59.252 55.000 5.79 5.79 43.22 2.82
4733 15319 0.748450 CATTGCTACTGCCCCAATGG 59.252 55.000 0.00 0.00 41.12 3.16
4734 15320 0.336048 ATTGCTACTGCCCCAATGGT 59.664 50.000 0.00 0.00 38.71 3.55
4735 15321 0.323360 TTGCTACTGCCCCAATGGTC 60.323 55.000 0.00 0.00 38.71 4.02
4736 15322 1.207488 TGCTACTGCCCCAATGGTCT 61.207 55.000 0.00 0.00 38.71 3.85
4737 15323 0.034089 GCTACTGCCCCAATGGTCTT 60.034 55.000 0.00 0.00 36.04 3.01
4738 15324 1.616994 GCTACTGCCCCAATGGTCTTT 60.617 52.381 0.00 0.00 36.04 2.52
4739 15325 2.094675 CTACTGCCCCAATGGTCTTTG 58.905 52.381 0.00 0.00 36.04 2.77
4740 15326 0.542702 ACTGCCCCAATGGTCTTTGG 60.543 55.000 0.00 8.22 44.82 3.28
4752 15338 6.967135 CAATGGTCTTTGGATCATCACTATG 58.033 40.000 0.00 0.00 41.94 2.23
4753 15339 5.039920 TGGTCTTTGGATCATCACTATGG 57.960 43.478 0.00 0.00 33.61 2.74
4754 15340 4.474651 TGGTCTTTGGATCATCACTATGGT 59.525 41.667 0.00 0.00 33.61 3.55
4755 15341 5.059833 GGTCTTTGGATCATCACTATGGTC 58.940 45.833 0.00 0.00 41.76 4.02
4756 15342 5.163258 GGTCTTTGGATCATCACTATGGTCT 60.163 44.000 0.00 0.00 42.10 3.85
4757 15343 5.988561 GTCTTTGGATCATCACTATGGTCTC 59.011 44.000 0.00 0.00 42.10 3.36
4758 15344 4.963318 TTGGATCATCACTATGGTCTCC 57.037 45.455 0.00 0.00 42.10 3.71
4759 15345 4.204792 TGGATCATCACTATGGTCTCCT 57.795 45.455 0.00 0.00 42.10 3.69
4760 15346 3.899980 TGGATCATCACTATGGTCTCCTG 59.100 47.826 0.00 0.00 42.10 3.86
4761 15347 3.900601 GGATCATCACTATGGTCTCCTGT 59.099 47.826 0.00 0.00 42.10 4.00
4762 15348 4.262377 GGATCATCACTATGGTCTCCTGTG 60.262 50.000 0.00 0.00 42.10 3.66
4763 15349 2.432146 TCATCACTATGGTCTCCTGTGC 59.568 50.000 0.00 0.00 33.61 4.57
4764 15350 0.817654 TCACTATGGTCTCCTGTGCG 59.182 55.000 0.00 0.00 0.00 5.34
4765 15351 0.532573 CACTATGGTCTCCTGTGCGT 59.467 55.000 0.00 0.00 0.00 5.24
4766 15352 0.818296 ACTATGGTCTCCTGTGCGTC 59.182 55.000 0.00 0.00 0.00 5.19
4767 15353 0.248661 CTATGGTCTCCTGTGCGTCG 60.249 60.000 0.00 0.00 0.00 5.12
4768 15354 0.963856 TATGGTCTCCTGTGCGTCGT 60.964 55.000 0.00 0.00 0.00 4.34
4769 15355 2.126424 GGTCTCCTGTGCGTCGTC 60.126 66.667 0.00 0.00 0.00 4.20
4770 15356 2.502080 GTCTCCTGTGCGTCGTCG 60.502 66.667 0.00 0.00 40.37 5.12
4771 15357 2.976350 TCTCCTGTGCGTCGTCGT 60.976 61.111 3.66 0.00 39.49 4.34
4772 15358 2.502080 CTCCTGTGCGTCGTCGTC 60.502 66.667 3.66 0.00 39.49 4.20
4773 15359 4.379143 TCCTGTGCGTCGTCGTCG 62.379 66.667 7.53 7.53 39.49 5.12
4780 15366 2.202440 CGTCGTCGTCGCAGGAAT 60.202 61.111 0.00 0.00 36.96 3.01
4781 15367 2.215604 CGTCGTCGTCGCAGGAATC 61.216 63.158 0.00 0.00 36.96 2.52
4782 15368 1.872679 GTCGTCGTCGCAGGAATCC 60.873 63.158 0.00 0.00 36.96 3.01
4783 15369 2.949678 CGTCGTCGCAGGAATCCG 60.950 66.667 0.00 0.00 0.00 4.18
4784 15370 2.181021 GTCGTCGCAGGAATCCGT 59.819 61.111 0.00 0.00 0.00 4.69
4785 15371 1.445582 GTCGTCGCAGGAATCCGTT 60.446 57.895 0.00 0.00 0.00 4.44
4786 15372 1.445410 TCGTCGCAGGAATCCGTTG 60.445 57.895 0.00 0.00 0.00 4.10
4787 15373 2.785258 GTCGCAGGAATCCGTTGC 59.215 61.111 3.66 3.66 34.58 4.17
4788 15374 2.435938 TCGCAGGAATCCGTTGCC 60.436 61.111 7.78 0.00 34.42 4.52
4789 15375 3.864686 CGCAGGAATCCGTTGCCG 61.865 66.667 7.78 0.77 34.42 5.69
4790 15376 2.746277 GCAGGAATCCGTTGCCGT 60.746 61.111 2.39 0.00 31.79 5.68
4791 15377 2.750888 GCAGGAATCCGTTGCCGTC 61.751 63.158 2.39 0.00 31.79 4.79
4792 15378 1.375396 CAGGAATCCGTTGCCGTCA 60.375 57.895 0.00 0.00 0.00 4.35
4793 15379 0.953471 CAGGAATCCGTTGCCGTCAA 60.953 55.000 0.00 0.00 0.00 3.18
4794 15380 0.953960 AGGAATCCGTTGCCGTCAAC 60.954 55.000 0.00 0.00 46.85 3.18
4807 15393 2.933495 CGTCAACGGAATCTACTCCA 57.067 50.000 0.00 0.00 34.91 3.86
4808 15394 3.438297 CGTCAACGGAATCTACTCCAT 57.562 47.619 0.00 0.00 34.91 3.41
4809 15395 3.372954 CGTCAACGGAATCTACTCCATC 58.627 50.000 0.00 0.00 34.91 3.51
4810 15396 3.372954 GTCAACGGAATCTACTCCATCG 58.627 50.000 0.00 0.00 34.91 3.84
4811 15397 3.021695 TCAACGGAATCTACTCCATCGT 58.978 45.455 0.00 0.00 34.91 3.73
4812 15398 3.446161 TCAACGGAATCTACTCCATCGTT 59.554 43.478 0.00 0.00 39.44 3.85
4813 15399 3.438297 ACGGAATCTACTCCATCGTTG 57.562 47.619 0.00 0.00 34.91 4.10
4814 15400 2.128035 CGGAATCTACTCCATCGTTGC 58.872 52.381 0.00 0.00 34.91 4.17
4815 15401 2.484889 GGAATCTACTCCATCGTTGCC 58.515 52.381 0.00 0.00 35.36 4.52
4816 15402 2.128035 GAATCTACTCCATCGTTGCCG 58.872 52.381 0.00 0.00 0.00 5.69
4817 15403 0.249489 ATCTACTCCATCGTTGCCGC 60.249 55.000 0.00 0.00 0.00 6.53
4818 15404 1.883084 CTACTCCATCGTTGCCGCC 60.883 63.158 0.00 0.00 0.00 6.13
4819 15405 3.709880 TACTCCATCGTTGCCGCCG 62.710 63.158 0.00 0.00 0.00 6.46
4821 15407 3.709880 CTCCATCGTTGCCGCCGTA 62.710 63.158 0.00 0.00 0.00 4.02
4822 15408 3.261951 CCATCGTTGCCGCCGTAG 61.262 66.667 0.00 0.00 0.00 3.51
4823 15409 2.202690 CATCGTTGCCGCCGTAGA 60.203 61.111 0.00 0.00 0.00 2.59
4824 15410 2.104331 ATCGTTGCCGCCGTAGAG 59.896 61.111 0.00 0.00 0.00 2.43
4825 15411 3.426117 ATCGTTGCCGCCGTAGAGG 62.426 63.158 0.00 0.00 44.97 3.69
4826 15412 4.124351 CGTTGCCGCCGTAGAGGA 62.124 66.667 0.00 0.00 45.00 3.71
4827 15413 2.499685 GTTGCCGCCGTAGAGGAT 59.500 61.111 0.00 0.00 45.00 3.24
4828 15414 1.591863 GTTGCCGCCGTAGAGGATC 60.592 63.158 0.00 0.00 45.00 3.36
4829 15415 3.133767 TTGCCGCCGTAGAGGATCG 62.134 63.158 0.00 0.00 45.00 3.69
4830 15416 3.593794 GCCGCCGTAGAGGATCGT 61.594 66.667 0.00 0.00 45.00 3.73
4831 15417 2.638154 CCGCCGTAGAGGATCGTC 59.362 66.667 7.34 7.34 45.00 4.20
4832 15418 2.184830 CCGCCGTAGAGGATCGTCA 61.185 63.158 17.19 1.38 45.00 4.35
4833 15419 1.009900 CGCCGTAGAGGATCGTCAC 60.010 63.158 17.19 11.63 45.00 3.67
4834 15420 1.359475 GCCGTAGAGGATCGTCACC 59.641 63.158 17.19 6.28 45.00 4.02
4835 15421 1.647629 CCGTAGAGGATCGTCACCG 59.352 63.158 17.19 16.24 45.00 4.94
4844 15430 4.828409 TCGTCACCGAGTTAGGGT 57.172 55.556 0.00 0.00 38.40 4.34
4852 15438 1.749634 ACCGAGTTAGGGTGAGATTCG 59.250 52.381 0.00 0.00 36.14 3.34
4853 15439 2.022195 CCGAGTTAGGGTGAGATTCGA 58.978 52.381 0.00 0.00 0.00 3.71
4854 15440 2.623889 CCGAGTTAGGGTGAGATTCGAT 59.376 50.000 0.00 0.00 0.00 3.59
4855 15441 3.304794 CCGAGTTAGGGTGAGATTCGATC 60.305 52.174 0.00 0.00 0.00 3.69
4856 15442 3.566322 CGAGTTAGGGTGAGATTCGATCT 59.434 47.826 0.00 0.00 43.70 2.75
4870 15456 2.285827 CGATCTCCTCGTGCTTTCTT 57.714 50.000 0.00 0.00 42.56 2.52
4871 15457 2.611518 CGATCTCCTCGTGCTTTCTTT 58.388 47.619 0.00 0.00 42.56 2.52
4872 15458 2.600867 CGATCTCCTCGTGCTTTCTTTC 59.399 50.000 0.00 0.00 42.56 2.62
4873 15459 3.674682 CGATCTCCTCGTGCTTTCTTTCT 60.675 47.826 0.00 0.00 42.56 2.52
4874 15460 3.305398 TCTCCTCGTGCTTTCTTTCTC 57.695 47.619 0.00 0.00 0.00 2.87
4875 15461 2.894126 TCTCCTCGTGCTTTCTTTCTCT 59.106 45.455 0.00 0.00 0.00 3.10
4876 15462 2.992543 CTCCTCGTGCTTTCTTTCTCTG 59.007 50.000 0.00 0.00 0.00 3.35
4877 15463 2.628178 TCCTCGTGCTTTCTTTCTCTGA 59.372 45.455 0.00 0.00 0.00 3.27
4878 15464 3.259374 TCCTCGTGCTTTCTTTCTCTGAT 59.741 43.478 0.00 0.00 0.00 2.90
4879 15465 3.999663 CCTCGTGCTTTCTTTCTCTGATT 59.000 43.478 0.00 0.00 0.00 2.57
4880 15466 4.092675 CCTCGTGCTTTCTTTCTCTGATTC 59.907 45.833 0.00 0.00 0.00 2.52
4881 15467 4.631131 TCGTGCTTTCTTTCTCTGATTCA 58.369 39.130 0.00 0.00 0.00 2.57
4882 15468 5.240891 TCGTGCTTTCTTTCTCTGATTCAT 58.759 37.500 0.00 0.00 0.00 2.57
4883 15469 5.702670 TCGTGCTTTCTTTCTCTGATTCATT 59.297 36.000 0.00 0.00 0.00 2.57
4884 15470 5.793952 CGTGCTTTCTTTCTCTGATTCATTG 59.206 40.000 0.00 0.00 0.00 2.82
4885 15471 5.572126 GTGCTTTCTTTCTCTGATTCATTGC 59.428 40.000 0.00 0.00 0.00 3.56
4886 15472 5.242171 TGCTTTCTTTCTCTGATTCATTGCA 59.758 36.000 0.00 0.00 0.00 4.08
4887 15473 5.572126 GCTTTCTTTCTCTGATTCATTGCAC 59.428 40.000 0.00 0.00 0.00 4.57
4888 15474 6.638096 TTTCTTTCTCTGATTCATTGCACA 57.362 33.333 0.00 0.00 0.00 4.57
4889 15475 6.638096 TTCTTTCTCTGATTCATTGCACAA 57.362 33.333 0.00 0.00 0.00 3.33
4890 15476 6.250344 TCTTTCTCTGATTCATTGCACAAG 57.750 37.500 0.00 0.00 0.00 3.16
4891 15477 5.182570 TCTTTCTCTGATTCATTGCACAAGG 59.817 40.000 0.00 0.00 0.00 3.61
4892 15478 4.290711 TCTCTGATTCATTGCACAAGGA 57.709 40.909 0.00 0.00 0.00 3.36
4893 15479 4.851843 TCTCTGATTCATTGCACAAGGAT 58.148 39.130 0.00 0.00 30.79 3.24
4894 15480 4.880120 TCTCTGATTCATTGCACAAGGATC 59.120 41.667 0.00 0.80 30.79 3.36
4895 15481 4.851843 TCTGATTCATTGCACAAGGATCT 58.148 39.130 0.00 0.00 30.79 2.75
4896 15482 5.258841 TCTGATTCATTGCACAAGGATCTT 58.741 37.500 0.00 0.00 30.79 2.40
4897 15483 5.713389 TCTGATTCATTGCACAAGGATCTTT 59.287 36.000 0.00 0.00 30.79 2.52
4898 15484 5.957798 TGATTCATTGCACAAGGATCTTTC 58.042 37.500 0.00 0.00 30.79 2.62
4899 15485 4.789012 TTCATTGCACAAGGATCTTTCC 57.211 40.909 0.00 0.00 42.96 3.13
4912 15498 5.552870 GGATCTTTCCTAGTATCTTGCCA 57.447 43.478 0.00 0.00 39.14 4.92
4913 15499 5.301555 GGATCTTTCCTAGTATCTTGCCAC 58.698 45.833 0.00 0.00 39.14 5.01
4914 15500 4.386867 TCTTTCCTAGTATCTTGCCACG 57.613 45.455 0.00 0.00 0.00 4.94
4915 15501 3.767673 TCTTTCCTAGTATCTTGCCACGT 59.232 43.478 0.00 0.00 0.00 4.49
4916 15502 4.222145 TCTTTCCTAGTATCTTGCCACGTT 59.778 41.667 0.00 0.00 0.00 3.99
4917 15503 4.546829 TTCCTAGTATCTTGCCACGTTT 57.453 40.909 0.00 0.00 0.00 3.60
4918 15504 4.119442 TCCTAGTATCTTGCCACGTTTC 57.881 45.455 0.00 0.00 0.00 2.78
4919 15505 3.512329 TCCTAGTATCTTGCCACGTTTCA 59.488 43.478 0.00 0.00 0.00 2.69
4920 15506 3.865745 CCTAGTATCTTGCCACGTTTCAG 59.134 47.826 0.00 0.00 0.00 3.02
4921 15507 3.678056 AGTATCTTGCCACGTTTCAGA 57.322 42.857 0.00 0.00 0.00 3.27
4922 15508 4.207891 AGTATCTTGCCACGTTTCAGAT 57.792 40.909 0.00 0.00 0.00 2.90
4923 15509 4.579869 AGTATCTTGCCACGTTTCAGATT 58.420 39.130 0.00 0.00 0.00 2.40
4924 15510 4.631813 AGTATCTTGCCACGTTTCAGATTC 59.368 41.667 0.00 0.00 0.00 2.52
4925 15511 2.844946 TCTTGCCACGTTTCAGATTCA 58.155 42.857 0.00 0.00 0.00 2.57
4926 15512 3.411446 TCTTGCCACGTTTCAGATTCAT 58.589 40.909 0.00 0.00 0.00 2.57
4927 15513 4.574892 TCTTGCCACGTTTCAGATTCATA 58.425 39.130 0.00 0.00 0.00 2.15
4928 15514 5.185454 TCTTGCCACGTTTCAGATTCATAT 58.815 37.500 0.00 0.00 0.00 1.78
4929 15515 6.345298 TCTTGCCACGTTTCAGATTCATATA 58.655 36.000 0.00 0.00 0.00 0.86
4930 15516 6.992123 TCTTGCCACGTTTCAGATTCATATAT 59.008 34.615 0.00 0.00 0.00 0.86
4931 15517 6.785488 TGCCACGTTTCAGATTCATATATC 57.215 37.500 0.00 0.00 0.00 1.63
4932 15518 5.700832 TGCCACGTTTCAGATTCATATATCC 59.299 40.000 0.00 0.00 0.00 2.59
4933 15519 5.700832 GCCACGTTTCAGATTCATATATCCA 59.299 40.000 0.00 0.00 0.00 3.41
4934 15520 6.347725 GCCACGTTTCAGATTCATATATCCAC 60.348 42.308 0.00 0.00 0.00 4.02
4935 15521 6.147821 CCACGTTTCAGATTCATATATCCACC 59.852 42.308 0.00 0.00 0.00 4.61
4936 15522 6.705825 CACGTTTCAGATTCATATATCCACCA 59.294 38.462 0.00 0.00 0.00 4.17
4937 15523 7.226523 CACGTTTCAGATTCATATATCCACCAA 59.773 37.037 0.00 0.00 0.00 3.67
4938 15524 7.773224 ACGTTTCAGATTCATATATCCACCAAA 59.227 33.333 0.00 0.00 0.00 3.28
4939 15525 8.620416 CGTTTCAGATTCATATATCCACCAAAA 58.380 33.333 0.00 0.00 0.00 2.44
4987 15573 5.395682 AAAAATTAGGGTTAGGTTTCCGC 57.604 39.130 0.00 0.00 0.00 5.54
4988 15574 2.723322 ATTAGGGTTAGGTTTCCGCC 57.277 50.000 0.00 0.00 0.00 6.13
4989 15575 0.249955 TTAGGGTTAGGTTTCCGCCG 59.750 55.000 0.00 0.00 0.00 6.46
4990 15576 0.614415 TAGGGTTAGGTTTCCGCCGA 60.614 55.000 0.00 0.00 0.00 5.54
4991 15577 1.003476 GGGTTAGGTTTCCGCCGAA 60.003 57.895 0.00 0.00 0.00 4.30
4992 15578 1.300971 GGGTTAGGTTTCCGCCGAAC 61.301 60.000 0.00 0.00 41.43 3.95
4993 15579 0.321034 GGTTAGGTTTCCGCCGAACT 60.321 55.000 7.74 0.00 41.72 3.01
4994 15580 1.073964 GTTAGGTTTCCGCCGAACTC 58.926 55.000 0.00 0.00 39.82 3.01
4995 15581 0.680618 TTAGGTTTCCGCCGAACTCA 59.319 50.000 0.00 0.00 0.00 3.41
4996 15582 0.899720 TAGGTTTCCGCCGAACTCAT 59.100 50.000 0.00 0.00 0.00 2.90
4997 15583 0.391263 AGGTTTCCGCCGAACTCATC 60.391 55.000 0.00 0.00 0.00 2.92
4998 15584 0.391263 GGTTTCCGCCGAACTCATCT 60.391 55.000 0.00 0.00 0.00 2.90
4999 15585 1.000145 GTTTCCGCCGAACTCATCTC 59.000 55.000 0.00 0.00 0.00 2.75
5000 15586 0.457853 TTTCCGCCGAACTCATCTCG 60.458 55.000 0.00 0.00 36.06 4.04
5005 15591 4.692129 CGAACTCATCTCGGACCG 57.308 61.111 7.84 7.84 32.62 4.79
5006 15592 2.095750 CGAACTCATCTCGGACCGA 58.904 57.895 17.28 17.28 32.62 4.69
5007 15593 0.248134 CGAACTCATCTCGGACCGAC 60.248 60.000 13.88 0.00 32.62 4.79
5008 15594 0.100861 GAACTCATCTCGGACCGACC 59.899 60.000 13.88 0.00 0.00 4.79
5031 15617 3.953712 AATGAAATTTTCGGTCCCACC 57.046 42.857 4.76 0.00 26.74 4.61
5032 15618 2.366640 TGAAATTTTCGGTCCCACCA 57.633 45.000 4.76 0.00 38.47 4.17
5033 15619 2.667470 TGAAATTTTCGGTCCCACCAA 58.333 42.857 4.76 0.00 38.47 3.67
5034 15620 3.235200 TGAAATTTTCGGTCCCACCAAT 58.765 40.909 4.76 0.00 38.47 3.16
5035 15621 3.643792 TGAAATTTTCGGTCCCACCAATT 59.356 39.130 4.76 0.00 38.47 2.32
5036 15622 3.676291 AATTTTCGGTCCCACCAATTG 57.324 42.857 0.00 0.00 38.47 2.32
5037 15623 1.333177 TTTTCGGTCCCACCAATTGG 58.667 50.000 23.31 23.31 46.47 3.16
5038 15624 1.182385 TTTCGGTCCCACCAATTGGC 61.182 55.000 24.79 7.44 45.37 4.52
5039 15625 3.068064 CGGTCCCACCAATTGGCC 61.068 66.667 24.79 15.40 45.37 5.36
5040 15626 2.683572 GGTCCCACCAATTGGCCC 60.684 66.667 24.79 12.40 45.37 5.80
5041 15627 3.068064 GTCCCACCAATTGGCCCG 61.068 66.667 24.79 12.82 45.37 6.13
5042 15628 4.374584 TCCCACCAATTGGCCCGG 62.375 66.667 24.79 20.55 45.37 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 4.068599 TCCTCGCAAAAACACACATCATA 58.931 39.130 0.00 0.00 0.00 2.15
70 71 2.884012 TCCTCGCAAAAACACACATCAT 59.116 40.909 0.00 0.00 0.00 2.45
73 75 2.687935 ACTTCCTCGCAAAAACACACAT 59.312 40.909 0.00 0.00 0.00 3.21
88 90 7.664318 CCTGTTATACACCAAACTTAACTTCCT 59.336 37.037 0.00 0.00 0.00 3.36
107 109 6.489603 TGTGGTGATTGTAAATCCCTGTTAT 58.510 36.000 0.00 0.00 0.00 1.89
130 132 9.609950 CCATAAAAACAAACCAAGCATTTAATG 57.390 29.630 0.00 0.00 0.00 1.90
131 133 9.566432 TCCATAAAAACAAACCAAGCATTTAAT 57.434 25.926 0.00 0.00 0.00 1.40
139 141 7.978975 TCTTGACTTCCATAAAAACAAACCAAG 59.021 33.333 0.00 0.00 0.00 3.61
156 158 9.377312 AGCTTTAGACATCTAATTCTTGACTTC 57.623 33.333 2.25 0.00 38.16 3.01
174 176 9.117183 TCGAGAAGTACATACATAAGCTTTAGA 57.883 33.333 3.20 0.00 0.00 2.10
189 191 1.135489 GTGTCGGCATCGAGAAGTACA 60.135 52.381 0.00 0.00 46.91 2.90
190 192 1.132643 AGTGTCGGCATCGAGAAGTAC 59.867 52.381 0.00 0.00 46.91 2.73
206 208 1.003851 CGTCAACCAAACGACAGTGT 58.996 50.000 0.00 0.00 42.62 3.55
208 210 3.744941 TCGTCAACCAAACGACAGT 57.255 47.368 0.00 0.00 43.65 3.55
212 214 0.922717 GTTCGTCGTCAACCAAACGA 59.077 50.000 0.00 0.00 46.08 3.85
234 249 0.951558 GCTTTGTCGGAACCACATGT 59.048 50.000 0.00 0.00 0.00 3.21
237 252 1.527380 GGGCTTTGTCGGAACCACA 60.527 57.895 0.00 0.00 0.00 4.17
247 262 1.673033 CGACGATGAGAAGGGCTTTGT 60.673 52.381 0.00 0.00 0.00 2.83
249 264 0.895530 TCGACGATGAGAAGGGCTTT 59.104 50.000 0.00 0.00 0.00 3.51
271 286 2.768344 AGGCCCCGACATCCGATT 60.768 61.111 0.00 0.00 41.76 3.34
291 306 4.970860 ATCCATCAACATCTTCTCCGAT 57.029 40.909 0.00 0.00 0.00 4.18
296 311 4.205587 GCAGGAATCCATCAACATCTTCT 58.794 43.478 0.61 0.00 0.00 2.85
361 376 1.681264 GCACACAAAAGGTAGCCAGTT 59.319 47.619 0.00 0.00 0.00 3.16
371 386 6.804295 TGTTTTAACACTACTGCACACAAAAG 59.196 34.615 0.00 0.00 33.17 2.27
395 410 1.366679 TCAGACGACGCTACTACCTG 58.633 55.000 0.00 0.00 0.00 4.00
408 423 7.507672 ACGAACATATAAGAAAGTTCAGACG 57.492 36.000 0.00 0.00 40.14 4.18
430 445 6.100004 ACCTGACAGTAAATGAGTATGAACG 58.900 40.000 0.93 0.00 0.00 3.95
432 447 6.371548 GCAACCTGACAGTAAATGAGTATGAA 59.628 38.462 0.93 0.00 0.00 2.57
455 630 0.319986 TAACACTCATTCACGCCGCA 60.320 50.000 0.00 0.00 0.00 5.69
464 639 7.443272 GTGTACCCACTTAAACTAACACTCATT 59.557 37.037 0.00 0.00 38.61 2.57
468 643 6.237887 TGTGTACCCACTTAAACTAACACT 57.762 37.500 0.00 0.00 42.34 3.55
474 649 5.128205 GGTTCTTGTGTACCCACTTAAACT 58.872 41.667 0.00 0.00 42.34 2.66
485 660 3.866910 TCTTGTTCACGGTTCTTGTGTAC 59.133 43.478 0.00 0.00 37.90 2.90
491 666 3.632145 AGCAAATCTTGTTCACGGTTCTT 59.368 39.130 0.00 0.00 0.00 2.52
493 668 3.626028 AGCAAATCTTGTTCACGGTTC 57.374 42.857 0.00 0.00 0.00 3.62
499 674 7.219917 CGTTCACTTAAAAGCAAATCTTGTTCA 59.780 33.333 0.00 0.00 34.67 3.18
503 678 5.977129 ACCGTTCACTTAAAAGCAAATCTTG 59.023 36.000 0.00 0.00 34.67 3.02
511 686 1.869132 ACGGACCGTTCACTTAAAAGC 59.131 47.619 15.37 0.00 36.35 3.51
552 727 2.380660 CGCATAACGCCGCATATTTTT 58.619 42.857 0.00 0.00 37.30 1.94
553 728 1.334599 CCGCATAACGCCGCATATTTT 60.335 47.619 0.00 0.00 41.76 1.82
555 730 0.601576 TCCGCATAACGCCGCATATT 60.602 50.000 0.00 0.00 41.76 1.28
560 735 2.052237 CATTCCGCATAACGCCGC 60.052 61.111 0.00 0.00 41.76 6.53
574 749 2.351276 GGACAGACCACGGGCATT 59.649 61.111 0.00 0.00 38.79 3.56
594 769 7.762615 TCCGGTATACATAATGCTTGCTATAAC 59.237 37.037 0.00 0.00 0.00 1.89
597 772 6.294361 TCCGGTATACATAATGCTTGCTAT 57.706 37.500 0.00 0.00 0.00 2.97
598 773 5.731957 TCCGGTATACATAATGCTTGCTA 57.268 39.130 0.00 0.00 0.00 3.49
604 779 3.485216 GCGCATTCCGGTATACATAATGC 60.485 47.826 24.70 24.70 45.57 3.56
626 801 1.226101 CGCAATTACACTGCTGCCG 60.226 57.895 0.00 0.00 37.67 5.69
632 807 4.085619 GCTTTTGTTGACGCAATTACACTG 60.086 41.667 0.00 0.00 0.00 3.66
683 858 3.872771 CACCCATGATTTTTAATGGCAGC 59.127 43.478 0.00 0.00 41.79 5.25
701 876 4.657013 AGACCTTTTCTCAAGATTCACCC 58.343 43.478 0.00 0.00 0.00 4.61
727 902 1.672356 GTGCGGTTGCCTGTGAGAT 60.672 57.895 0.00 0.00 41.78 2.75
796 974 1.525442 GTTGGATCGGGAATCGGGT 59.475 57.895 0.00 0.00 39.77 5.28
1160 1340 1.325640 CCGCATCAGATCGTGAACAAG 59.674 52.381 0.01 0.00 39.19 3.16
1181 1371 3.084039 GAGATGCATGTTCCACCTCAAA 58.916 45.455 2.46 0.00 0.00 2.69
1182 1372 2.040145 TGAGATGCATGTTCCACCTCAA 59.960 45.455 2.46 0.00 0.00 3.02
1183 1373 1.629861 TGAGATGCATGTTCCACCTCA 59.370 47.619 2.46 5.87 0.00 3.86
1184 1374 2.286872 CTGAGATGCATGTTCCACCTC 58.713 52.381 2.46 2.86 0.00 3.85
1185 1375 1.064906 CCTGAGATGCATGTTCCACCT 60.065 52.381 2.46 0.00 0.00 4.00
1186 1376 1.065199 TCCTGAGATGCATGTTCCACC 60.065 52.381 2.46 0.00 0.00 4.61
1187 1377 2.408271 TCCTGAGATGCATGTTCCAC 57.592 50.000 2.46 0.00 0.00 4.02
1188 1378 3.245016 ACTTTCCTGAGATGCATGTTCCA 60.245 43.478 2.46 0.00 0.00 3.53
1189 1379 3.350833 ACTTTCCTGAGATGCATGTTCC 58.649 45.455 2.46 0.00 0.00 3.62
1190 1380 4.217118 ACAACTTTCCTGAGATGCATGTTC 59.783 41.667 2.46 1.96 0.00 3.18
1210 1400 1.339610 CCAACCAAATTCCTCGCACAA 59.660 47.619 0.00 0.00 0.00 3.33
1211 1401 0.958091 CCAACCAAATTCCTCGCACA 59.042 50.000 0.00 0.00 0.00 4.57
1212 1402 0.958822 ACCAACCAAATTCCTCGCAC 59.041 50.000 0.00 0.00 0.00 5.34
1295 1485 8.598041 ACAGGAAGATCTTATATGGTATCCAAC 58.402 37.037 8.25 0.00 36.95 3.77
1353 1553 1.470285 GCGGCTTGCAATCAATCACAT 60.470 47.619 0.00 0.00 45.45 3.21
1368 1568 2.169352 AGACAATCATAGAAGTGCGGCT 59.831 45.455 0.00 0.00 0.00 5.52
1372 1572 2.286294 CGGCAGACAATCATAGAAGTGC 59.714 50.000 0.00 0.00 0.00 4.40
1378 1578 2.477825 CAGGACGGCAGACAATCATAG 58.522 52.381 0.00 0.00 0.00 2.23
1387 1587 0.395724 TCTATCAGCAGGACGGCAGA 60.396 55.000 0.00 0.00 35.83 4.26
1409 1613 7.201794 CCATATCATGGCTTCATCAACCATATC 60.202 40.741 0.00 0.00 44.70 1.63
1410 1614 6.605995 CCATATCATGGCTTCATCAACCATAT 59.394 38.462 0.00 0.00 44.70 1.78
1411 1615 5.947566 CCATATCATGGCTTCATCAACCATA 59.052 40.000 0.00 0.00 44.70 2.74
1412 1616 4.770531 CCATATCATGGCTTCATCAACCAT 59.229 41.667 0.00 0.00 44.70 3.55
1435 1639 3.067106 CAACACTACATCACAGTCACCC 58.933 50.000 0.00 0.00 0.00 4.61
1483 1687 5.795441 GCTGTTACGCCTTTTTCTAGAATTG 59.205 40.000 5.89 0.00 0.00 2.32
1493 1697 2.158841 CACATACGCTGTTACGCCTTTT 59.841 45.455 0.00 0.00 35.29 2.27
1536 1740 7.093509 TGAGTTGTGAGTAAGACCTGCATAATA 60.094 37.037 0.00 0.00 0.00 0.98
1587 1791 2.006748 CAATAAGCCCCCACTCCCA 58.993 57.895 0.00 0.00 0.00 4.37
1630 1834 3.140325 ACCCTGGACACATACAGTTTG 57.860 47.619 0.00 0.00 34.53 2.93
1631 1835 3.908103 AGTACCCTGGACACATACAGTTT 59.092 43.478 0.00 0.00 34.53 2.66
1632 1836 3.260884 CAGTACCCTGGACACATACAGTT 59.739 47.826 0.00 0.00 34.53 3.16
1648 1999 6.150474 TGCTTAAGTAAAGGAAATGCAGTACC 59.850 38.462 4.02 0.00 35.58 3.34
1804 2155 3.057736 TCGGTAAGATGTTCTATAGCGCC 60.058 47.826 2.29 0.00 38.66 6.53
1813 2164 7.171678 CCATAATCTCCTTTCGGTAAGATGTTC 59.828 40.741 0.00 0.00 35.80 3.18
1869 2220 0.037326 ACATGTGCCACGTGTCTAGG 60.037 55.000 16.78 0.00 44.41 3.02
2006 2357 2.496899 AATTCCCTCGAAGCACACAT 57.503 45.000 0.00 0.00 0.00 3.21
2036 2387 0.962356 CATGGACCCAAGGCAGACAC 60.962 60.000 0.00 0.00 0.00 3.67
2079 2430 4.347453 GGGTGCTGCCAAACTGCG 62.347 66.667 0.00 0.00 45.63 5.18
2119 2470 2.855514 GCCACCACAACGCCATGTT 61.856 57.895 0.00 0.00 43.09 2.71
2120 2471 3.294493 GCCACCACAACGCCATGT 61.294 61.111 0.00 0.00 0.00 3.21
2127 2478 1.302511 ATCCTCACGCCACCACAAC 60.303 57.895 0.00 0.00 0.00 3.32
2174 2525 1.380650 AACGCCTCTCCCTCCTCTC 60.381 63.158 0.00 0.00 0.00 3.20
2194 2545 1.342275 CCATTTCCTCCCCATTGCTGA 60.342 52.381 0.00 0.00 0.00 4.26
2208 2559 1.131126 CGTCATCAGCACCACCATTTC 59.869 52.381 0.00 0.00 0.00 2.17
2216 2567 1.156645 GCATCCTCGTCATCAGCACC 61.157 60.000 0.00 0.00 0.00 5.01
2378 2729 6.841229 AGAAGAGGGATTTGGAAAAGAACTTT 59.159 34.615 0.00 0.00 0.00 2.66
2561 4590 2.038557 CACAGTAAGGTAACCTGTGCCT 59.961 50.000 6.13 0.00 46.53 4.75
2579 4608 0.973632 ACCTCACCATCTAACGCACA 59.026 50.000 0.00 0.00 0.00 4.57
2585 4614 3.300032 AGGCGACCTCACCATCTAA 57.700 52.632 0.00 0.00 0.00 2.10
2604 4633 4.420168 CAAAACATGGTTATTAGTGCGGG 58.580 43.478 0.00 0.00 0.00 6.13
2624 4653 3.064682 GGCATGACACATACAATACGCAA 59.935 43.478 0.00 0.00 0.00 4.85
2700 4729 1.202952 TGGCATTTTCCGTTGGTACCT 60.203 47.619 14.36 0.00 0.00 3.08
2864 4909 8.037758 ACATCAAGAGATCTTACGTTTGAGATT 58.962 33.333 0.00 0.00 32.96 2.40
2870 4915 7.378966 TCAGAACATCAAGAGATCTTACGTTT 58.621 34.615 0.00 0.00 34.28 3.60
2959 5011 4.576216 TTAAATGAACTTCGGCAAGCAA 57.424 36.364 0.00 0.00 32.09 3.91
3033 5085 7.869937 TCATGCTTCCATTTTTCGTCAAATTAA 59.130 29.630 0.00 0.00 0.00 1.40
3097 5149 1.907255 GGGACTAGTAAACCCTGCTGT 59.093 52.381 10.30 0.00 40.39 4.40
3218 5276 6.183360 ACAAATTTAACCTCCGGATATGCAAG 60.183 38.462 3.57 0.00 0.00 4.01
3565 5669 7.354751 AGAACAGGAAGGAACTATAGTCATC 57.645 40.000 5.70 0.70 38.49 2.92
3615 5719 0.519077 GCAACGGCTGAAGGAAGAAG 59.481 55.000 0.00 0.00 36.96 2.85
3735 5839 3.173151 TCTAACAGATGGTGCCTTCTCA 58.827 45.455 3.93 0.00 0.00 3.27
3811 5915 4.877773 AGAGAGAGAGAGAGAGAGAGAGT 58.122 47.826 0.00 0.00 0.00 3.24
3859 6397 1.881973 TGCCACACATCAAGAAAGCTC 59.118 47.619 0.00 0.00 0.00 4.09
3866 6404 6.183360 ACAATGAATCTATGCCACACATCAAG 60.183 38.462 0.00 0.00 40.38 3.02
3871 6409 5.712004 CAAACAATGAATCTATGCCACACA 58.288 37.500 0.00 0.00 0.00 3.72
3891 6429 2.267351 CCTGCATCACCACGGCAAA 61.267 57.895 0.00 0.00 37.06 3.68
3917 6455 5.835113 TTGCTAGCAAACTGAACTTCTTT 57.165 34.783 27.50 0.00 32.44 2.52
3930 6468 1.855213 CGCTGCCAGTTTGCTAGCAA 61.855 55.000 26.06 26.06 38.77 3.91
3938 6476 1.003718 GTACTCCCGCTGCCAGTTT 60.004 57.895 0.00 0.00 0.00 2.66
3950 6488 5.599999 AGACATGTTCCATAGTGTACTCC 57.400 43.478 0.00 0.00 0.00 3.85
4089 9924 4.485653 TCCCATGGGAGTGACATAGATA 57.514 45.455 30.62 2.11 39.76 1.98
4170 10005 2.885113 CAGATCGCGAGGGACACA 59.115 61.111 16.66 0.00 0.00 3.72
4256 10091 4.277423 ACGGGTTGTTTCTTCAATTACAGG 59.723 41.667 0.00 0.00 0.00 4.00
4353 10205 3.070018 GGTGTGAGACCATCAAAGAGTG 58.930 50.000 0.00 0.00 45.34 3.51
4450 11921 6.036517 CAGTCAGCTAGTAGCACCTATTTTTG 59.963 42.308 23.77 9.98 45.56 2.44
4459 11930 2.370281 TTGCAGTCAGCTAGTAGCAC 57.630 50.000 23.77 13.93 45.56 4.40
4516 15102 9.688592 AAAATTTGTCTGAGATCAAACTTCATC 57.311 29.630 10.74 0.00 36.58 2.92
4581 15167 2.429610 AGATTGACCAAGCCAATGATGC 59.570 45.455 0.00 0.00 34.67 3.91
4582 15168 4.730949 AAGATTGACCAAGCCAATGATG 57.269 40.909 0.00 0.00 34.67 3.07
4583 15169 5.163622 CGTAAAGATTGACCAAGCCAATGAT 60.164 40.000 0.00 0.00 34.67 2.45
4584 15170 4.155826 CGTAAAGATTGACCAAGCCAATGA 59.844 41.667 0.00 0.00 34.67 2.57
4585 15171 4.082787 ACGTAAAGATTGACCAAGCCAATG 60.083 41.667 0.00 0.00 34.67 2.82
4586 15172 4.079253 ACGTAAAGATTGACCAAGCCAAT 58.921 39.130 0.00 0.00 36.98 3.16
4587 15173 3.252215 CACGTAAAGATTGACCAAGCCAA 59.748 43.478 0.00 0.00 0.00 4.52
4588 15174 2.811431 CACGTAAAGATTGACCAAGCCA 59.189 45.455 0.00 0.00 0.00 4.75
4589 15175 3.071479 TCACGTAAAGATTGACCAAGCC 58.929 45.455 0.00 0.00 0.00 4.35
4590 15176 4.066710 GTCACGTAAAGATTGACCAAGC 57.933 45.455 0.00 0.00 34.72 4.01
4595 15181 5.119743 GGTAGTTGGTCACGTAAAGATTGAC 59.880 44.000 0.00 0.00 39.18 3.18
4596 15182 5.011329 AGGTAGTTGGTCACGTAAAGATTGA 59.989 40.000 0.00 0.00 0.00 2.57
4597 15183 5.235516 AGGTAGTTGGTCACGTAAAGATTG 58.764 41.667 0.00 0.00 0.00 2.67
4598 15184 5.479124 AGGTAGTTGGTCACGTAAAGATT 57.521 39.130 0.00 0.00 0.00 2.40
4599 15185 6.594788 TTAGGTAGTTGGTCACGTAAAGAT 57.405 37.500 0.00 0.00 0.00 2.40
4600 15186 6.594788 ATTAGGTAGTTGGTCACGTAAAGA 57.405 37.500 0.00 0.00 31.18 2.52
4601 15187 7.542025 AGTATTAGGTAGTTGGTCACGTAAAG 58.458 38.462 0.00 0.00 31.18 1.85
4602 15188 7.466746 AGTATTAGGTAGTTGGTCACGTAAA 57.533 36.000 0.00 0.00 31.18 2.01
4603 15189 7.201609 CGTAGTATTAGGTAGTTGGTCACGTAA 60.202 40.741 0.00 0.00 31.74 3.18
4604 15190 6.257849 CGTAGTATTAGGTAGTTGGTCACGTA 59.742 42.308 0.00 0.00 0.00 3.57
4605 15191 5.065218 CGTAGTATTAGGTAGTTGGTCACGT 59.935 44.000 0.00 0.00 0.00 4.49
4606 15192 5.505286 CGTAGTATTAGGTAGTTGGTCACG 58.495 45.833 0.00 0.00 0.00 4.35
4607 15193 5.163622 TGCGTAGTATTAGGTAGTTGGTCAC 60.164 44.000 0.00 0.00 0.00 3.67
4608 15194 4.949238 TGCGTAGTATTAGGTAGTTGGTCA 59.051 41.667 0.00 0.00 0.00 4.02
4609 15195 5.505173 TGCGTAGTATTAGGTAGTTGGTC 57.495 43.478 0.00 0.00 0.00 4.02
4610 15196 4.340381 CCTGCGTAGTATTAGGTAGTTGGT 59.660 45.833 0.00 0.00 0.00 3.67
4611 15197 4.795308 GCCTGCGTAGTATTAGGTAGTTGG 60.795 50.000 0.00 0.00 32.85 3.77
4612 15198 4.037684 AGCCTGCGTAGTATTAGGTAGTTG 59.962 45.833 0.00 0.00 32.85 3.16
4613 15199 4.213513 AGCCTGCGTAGTATTAGGTAGTT 58.786 43.478 0.00 0.00 32.85 2.24
4614 15200 3.819902 GAGCCTGCGTAGTATTAGGTAGT 59.180 47.826 0.00 0.00 32.85 2.73
4615 15201 3.819337 TGAGCCTGCGTAGTATTAGGTAG 59.181 47.826 0.00 0.00 32.85 3.18
4616 15202 3.824133 TGAGCCTGCGTAGTATTAGGTA 58.176 45.455 0.00 0.00 32.85 3.08
4617 15203 2.662866 TGAGCCTGCGTAGTATTAGGT 58.337 47.619 0.00 0.00 32.85 3.08
4618 15204 3.255888 TGATGAGCCTGCGTAGTATTAGG 59.744 47.826 0.00 0.00 0.00 2.69
4619 15205 4.505313 TGATGAGCCTGCGTAGTATTAG 57.495 45.455 0.00 0.00 0.00 1.73
4620 15206 4.929819 TTGATGAGCCTGCGTAGTATTA 57.070 40.909 0.00 0.00 0.00 0.98
4621 15207 3.819564 TTGATGAGCCTGCGTAGTATT 57.180 42.857 0.00 0.00 0.00 1.89
4622 15208 3.118775 TGTTTGATGAGCCTGCGTAGTAT 60.119 43.478 0.00 0.00 0.00 2.12
4623 15209 2.232696 TGTTTGATGAGCCTGCGTAGTA 59.767 45.455 0.00 0.00 0.00 1.82
4624 15210 1.001974 TGTTTGATGAGCCTGCGTAGT 59.998 47.619 0.00 0.00 0.00 2.73
4625 15211 1.662629 CTGTTTGATGAGCCTGCGTAG 59.337 52.381 0.00 0.00 0.00 3.51
4626 15212 1.725641 CTGTTTGATGAGCCTGCGTA 58.274 50.000 0.00 0.00 0.00 4.42
4627 15213 1.580845 GCTGTTTGATGAGCCTGCGT 61.581 55.000 0.00 0.00 0.00 5.24
4628 15214 1.136147 GCTGTTTGATGAGCCTGCG 59.864 57.895 0.00 0.00 0.00 5.18
4629 15215 0.109412 GTGCTGTTTGATGAGCCTGC 60.109 55.000 0.00 0.00 34.04 4.85
4630 15216 1.241165 TGTGCTGTTTGATGAGCCTG 58.759 50.000 0.00 0.00 34.04 4.85
4631 15217 1.816835 CATGTGCTGTTTGATGAGCCT 59.183 47.619 0.00 0.00 34.04 4.58
4632 15218 1.135199 CCATGTGCTGTTTGATGAGCC 60.135 52.381 0.00 0.00 34.04 4.70
4633 15219 1.135199 CCCATGTGCTGTTTGATGAGC 60.135 52.381 0.00 0.00 35.65 4.26
4634 15220 2.165167 ACCCATGTGCTGTTTGATGAG 58.835 47.619 0.00 0.00 0.00 2.90
4635 15221 2.291209 ACCCATGTGCTGTTTGATGA 57.709 45.000 0.00 0.00 0.00 2.92
4636 15222 7.692460 ATATATACCCATGTGCTGTTTGATG 57.308 36.000 0.00 0.00 0.00 3.07
4637 15223 9.618890 GATATATATACCCATGTGCTGTTTGAT 57.381 33.333 0.00 0.00 0.00 2.57
4638 15224 8.825774 AGATATATATACCCATGTGCTGTTTGA 58.174 33.333 0.00 0.00 0.00 2.69
4639 15225 9.453572 AAGATATATATACCCATGTGCTGTTTG 57.546 33.333 0.00 0.00 0.00 2.93
4640 15226 9.453572 CAAGATATATATACCCATGTGCTGTTT 57.546 33.333 0.00 0.00 0.00 2.83
4641 15227 7.554118 GCAAGATATATATACCCATGTGCTGTT 59.446 37.037 0.00 0.00 0.00 3.16
4642 15228 7.050377 GCAAGATATATATACCCATGTGCTGT 58.950 38.462 0.00 0.00 0.00 4.40
4643 15229 6.201615 CGCAAGATATATATACCCATGTGCTG 59.798 42.308 0.00 0.00 43.02 4.41
4644 15230 6.098266 TCGCAAGATATATATACCCATGTGCT 59.902 38.462 0.00 0.00 45.01 4.40
4645 15231 6.280643 TCGCAAGATATATATACCCATGTGC 58.719 40.000 0.00 0.00 45.01 4.57
4670 15256 4.023878 TGAAGAATTTTTCAACCGTACGGG 60.024 41.667 35.86 20.56 34.32 5.28
4671 15257 5.098218 TGAAGAATTTTTCAACCGTACGG 57.902 39.130 32.22 32.22 34.32 4.02
4672 15258 6.343616 CGTTTGAAGAATTTTTCAACCGTACG 60.344 38.462 24.14 22.82 43.49 3.67
4673 15259 6.848812 CGTTTGAAGAATTTTTCAACCGTAC 58.151 36.000 24.14 17.65 43.49 3.67
4675 15261 5.942325 CGTTTGAAGAATTTTTCAACCGT 57.058 34.783 24.14 0.00 43.49 4.83
4677 15263 6.892430 CGAAACGTTTGAAGAATTTTTCAACC 59.108 34.615 20.10 14.32 44.33 3.77
4678 15264 7.659159 TCGAAACGTTTGAAGAATTTTTCAAC 58.341 30.769 20.10 14.95 44.33 3.18
4679 15265 7.462200 GCTCGAAACGTTTGAAGAATTTTTCAA 60.462 33.333 20.10 17.59 43.32 2.69
4680 15266 6.020995 GCTCGAAACGTTTGAAGAATTTTTCA 60.021 34.615 20.10 7.30 35.38 2.69
4681 15267 6.337152 GCTCGAAACGTTTGAAGAATTTTTC 58.663 36.000 20.10 1.81 0.00 2.29
4682 15268 5.231357 GGCTCGAAACGTTTGAAGAATTTTT 59.769 36.000 20.10 0.00 0.00 1.94
4683 15269 4.738252 GGCTCGAAACGTTTGAAGAATTTT 59.262 37.500 20.10 0.00 0.00 1.82
4684 15270 4.287720 GGCTCGAAACGTTTGAAGAATTT 58.712 39.130 20.10 0.00 0.00 1.82
4685 15271 3.304458 GGGCTCGAAACGTTTGAAGAATT 60.304 43.478 20.10 0.00 0.00 2.17
4686 15272 2.225727 GGGCTCGAAACGTTTGAAGAAT 59.774 45.455 20.10 0.00 0.00 2.40
4687 15273 1.600485 GGGCTCGAAACGTTTGAAGAA 59.400 47.619 20.10 0.00 0.00 2.52
4688 15274 1.223187 GGGCTCGAAACGTTTGAAGA 58.777 50.000 20.10 13.38 0.00 2.87
4689 15275 0.110823 CGGGCTCGAAACGTTTGAAG 60.111 55.000 20.10 15.55 39.00 3.02
4690 15276 1.935925 CGGGCTCGAAACGTTTGAA 59.064 52.632 20.10 5.00 39.00 2.69
4691 15277 2.600475 GCGGGCTCGAAACGTTTGA 61.600 57.895 20.10 14.47 39.00 2.69
4692 15278 2.127383 GCGGGCTCGAAACGTTTG 60.127 61.111 20.10 10.89 39.00 2.93
4693 15279 2.589442 TGCGGGCTCGAAACGTTT 60.589 55.556 12.03 14.57 39.00 3.60
4694 15280 3.343421 GTGCGGGCTCGAAACGTT 61.343 61.111 12.03 0.00 39.00 3.99
4708 15294 2.418083 GGCAGTAGCAATGGGGTGC 61.418 63.158 0.00 0.00 44.61 5.01
4709 15295 1.754234 GGGCAGTAGCAATGGGGTG 60.754 63.158 0.00 0.00 44.61 4.61
4710 15296 2.683475 GGGCAGTAGCAATGGGGT 59.317 61.111 0.00 0.00 44.61 4.95
4711 15297 2.123726 GGGGCAGTAGCAATGGGG 60.124 66.667 0.00 0.00 44.61 4.96
4712 15298 0.397535 ATTGGGGCAGTAGCAATGGG 60.398 55.000 0.00 0.00 44.61 4.00
4713 15299 0.748450 CATTGGGGCAGTAGCAATGG 59.252 55.000 0.00 0.00 44.61 3.16
4714 15300 0.748450 CCATTGGGGCAGTAGCAATG 59.252 55.000 0.00 0.00 44.61 2.82
4715 15301 0.336048 ACCATTGGGGCAGTAGCAAT 59.664 50.000 7.78 0.00 44.61 3.56
4716 15302 0.323360 GACCATTGGGGCAGTAGCAA 60.323 55.000 7.78 0.00 44.16 3.91
4717 15303 1.302949 GACCATTGGGGCAGTAGCA 59.697 57.895 7.78 0.00 44.16 3.49
4718 15304 4.242602 GACCATTGGGGCAGTAGC 57.757 61.111 7.78 0.00 44.16 3.58
4726 15312 8.868583 CATAGTGATGATCCAAAGACCATTGGG 61.869 44.444 7.78 0.00 41.64 4.12
4727 15313 6.016527 CATAGTGATGATCCAAAGACCATTGG 60.017 42.308 0.00 0.00 42.16 3.16
4728 15314 6.016527 CCATAGTGATGATCCAAAGACCATTG 60.017 42.308 0.00 0.00 34.73 2.82
4729 15315 6.066690 CCATAGTGATGATCCAAAGACCATT 58.933 40.000 0.00 0.00 34.73 3.16
4730 15316 5.133322 ACCATAGTGATGATCCAAAGACCAT 59.867 40.000 0.00 0.00 34.73 3.55
4731 15317 4.474651 ACCATAGTGATGATCCAAAGACCA 59.525 41.667 0.00 0.00 34.73 4.02
4732 15318 5.041191 ACCATAGTGATGATCCAAAGACC 57.959 43.478 0.00 0.00 34.73 3.85
4733 15319 5.923204 AGACCATAGTGATGATCCAAAGAC 58.077 41.667 0.00 0.00 34.73 3.01
4734 15320 5.070981 GGAGACCATAGTGATGATCCAAAGA 59.929 44.000 0.00 0.00 34.73 2.52
4735 15321 5.071519 AGGAGACCATAGTGATGATCCAAAG 59.928 44.000 0.00 0.00 34.71 2.77
4736 15322 4.971282 AGGAGACCATAGTGATGATCCAAA 59.029 41.667 0.00 0.00 34.71 3.28
4737 15323 4.346127 CAGGAGACCATAGTGATGATCCAA 59.654 45.833 0.00 0.00 34.71 3.53
4738 15324 3.899980 CAGGAGACCATAGTGATGATCCA 59.100 47.826 0.00 0.00 34.71 3.41
4739 15325 3.900601 ACAGGAGACCATAGTGATGATCC 59.099 47.826 0.00 0.00 34.73 3.36
4740 15326 4.798924 GCACAGGAGACCATAGTGATGATC 60.799 50.000 0.00 0.00 34.73 2.92
4741 15327 3.070734 GCACAGGAGACCATAGTGATGAT 59.929 47.826 0.00 0.00 34.73 2.45
4742 15328 2.432146 GCACAGGAGACCATAGTGATGA 59.568 50.000 0.00 0.00 34.73 2.92
4743 15329 2.800985 CGCACAGGAGACCATAGTGATG 60.801 54.545 0.00 0.00 32.14 3.07
4744 15330 1.410517 CGCACAGGAGACCATAGTGAT 59.589 52.381 0.00 0.00 32.14 3.06
4745 15331 0.817654 CGCACAGGAGACCATAGTGA 59.182 55.000 0.00 0.00 32.14 3.41
4746 15332 0.532573 ACGCACAGGAGACCATAGTG 59.467 55.000 0.00 0.00 0.00 2.74
4747 15333 0.818296 GACGCACAGGAGACCATAGT 59.182 55.000 0.00 0.00 0.00 2.12
4748 15334 0.248661 CGACGCACAGGAGACCATAG 60.249 60.000 0.00 0.00 0.00 2.23
4749 15335 0.963856 ACGACGCACAGGAGACCATA 60.964 55.000 0.00 0.00 0.00 2.74
4750 15336 2.214181 GACGACGCACAGGAGACCAT 62.214 60.000 0.00 0.00 0.00 3.55
4751 15337 2.910479 ACGACGCACAGGAGACCA 60.910 61.111 0.00 0.00 0.00 4.02
4752 15338 2.126424 GACGACGCACAGGAGACC 60.126 66.667 0.00 0.00 0.00 3.85
4753 15339 2.502080 CGACGACGCACAGGAGAC 60.502 66.667 0.00 0.00 0.00 3.36
4754 15340 2.962827 GACGACGACGCACAGGAGA 61.963 63.158 7.30 0.00 43.96 3.71
4755 15341 2.502080 GACGACGACGCACAGGAG 60.502 66.667 7.30 0.00 43.96 3.69
4756 15342 4.379143 CGACGACGACGCACAGGA 62.379 66.667 7.30 0.00 43.96 3.86
4763 15349 2.202440 ATTCCTGCGACGACGACG 60.202 61.111 15.13 15.13 42.66 5.12
4764 15350 1.872679 GGATTCCTGCGACGACGAC 60.873 63.158 12.29 3.11 42.66 4.34
4765 15351 2.488355 GGATTCCTGCGACGACGA 59.512 61.111 12.29 0.00 42.66 4.20
4766 15352 2.949678 CGGATTCCTGCGACGACG 60.950 66.667 2.12 2.12 38.69 5.12
4767 15353 1.445582 AACGGATTCCTGCGACGAC 60.446 57.895 0.00 0.00 38.69 4.34
4768 15354 1.445410 CAACGGATTCCTGCGACGA 60.445 57.895 0.00 0.00 38.69 4.20
4769 15355 3.081133 CAACGGATTCCTGCGACG 58.919 61.111 0.30 0.00 38.69 5.12
4770 15356 2.750888 GGCAACGGATTCCTGCGAC 61.751 63.158 9.98 0.00 38.69 5.19
4771 15357 2.435938 GGCAACGGATTCCTGCGA 60.436 61.111 9.98 0.00 38.69 5.10
4788 15374 2.933495 TGGAGTAGATTCCGTTGACG 57.067 50.000 0.00 0.00 40.27 4.35
4789 15375 3.181489 ACGATGGAGTAGATTCCGTTGAC 60.181 47.826 7.37 0.00 39.20 3.18
4790 15376 3.021695 ACGATGGAGTAGATTCCGTTGA 58.978 45.455 7.37 0.00 39.20 3.18
4791 15377 3.438297 ACGATGGAGTAGATTCCGTTG 57.562 47.619 0.00 0.12 41.58 4.10
4792 15378 3.782046 CAACGATGGAGTAGATTCCGTT 58.218 45.455 0.00 0.00 40.27 4.44
4793 15379 2.481449 GCAACGATGGAGTAGATTCCGT 60.481 50.000 0.00 0.00 40.27 4.69
4794 15380 2.128035 GCAACGATGGAGTAGATTCCG 58.872 52.381 0.00 0.00 40.27 4.30
4795 15381 2.484889 GGCAACGATGGAGTAGATTCC 58.515 52.381 0.00 0.00 37.77 3.01
4810 15396 1.591863 GATCCTCTACGGCGGCAAC 60.592 63.158 13.24 0.00 0.00 4.17
4811 15397 2.812499 GATCCTCTACGGCGGCAA 59.188 61.111 13.24 0.00 0.00 4.52
4812 15398 3.592814 CGATCCTCTACGGCGGCA 61.593 66.667 13.24 0.00 0.00 5.69
4813 15399 3.539560 GACGATCCTCTACGGCGGC 62.540 68.421 13.24 0.00 0.00 6.53
4814 15400 2.184830 TGACGATCCTCTACGGCGG 61.185 63.158 13.24 0.00 40.70 6.13
4815 15401 1.009900 GTGACGATCCTCTACGGCG 60.010 63.158 4.80 4.80 40.70 6.46
4816 15402 1.359475 GGTGACGATCCTCTACGGC 59.641 63.158 0.00 0.00 38.09 5.68
4832 15418 1.749634 CGAATCTCACCCTAACTCGGT 59.250 52.381 0.00 0.00 0.00 4.69
4833 15419 2.022195 TCGAATCTCACCCTAACTCGG 58.978 52.381 0.00 0.00 0.00 4.63
4834 15420 3.566322 AGATCGAATCTCACCCTAACTCG 59.434 47.826 0.00 0.00 33.42 4.18
4852 15438 3.855858 AGAAAGAAAGCACGAGGAGATC 58.144 45.455 0.00 0.00 0.00 2.75
4853 15439 3.513515 AGAGAAAGAAAGCACGAGGAGAT 59.486 43.478 0.00 0.00 0.00 2.75
4854 15440 2.894126 AGAGAAAGAAAGCACGAGGAGA 59.106 45.455 0.00 0.00 0.00 3.71
4855 15441 2.992543 CAGAGAAAGAAAGCACGAGGAG 59.007 50.000 0.00 0.00 0.00 3.69
4856 15442 2.628178 TCAGAGAAAGAAAGCACGAGGA 59.372 45.455 0.00 0.00 0.00 3.71
4857 15443 3.032017 TCAGAGAAAGAAAGCACGAGG 57.968 47.619 0.00 0.00 0.00 4.63
4858 15444 4.687948 TGAATCAGAGAAAGAAAGCACGAG 59.312 41.667 0.00 0.00 0.00 4.18
4859 15445 4.631131 TGAATCAGAGAAAGAAAGCACGA 58.369 39.130 0.00 0.00 0.00 4.35
4860 15446 4.997905 TGAATCAGAGAAAGAAAGCACG 57.002 40.909 0.00 0.00 0.00 5.34
4861 15447 5.572126 GCAATGAATCAGAGAAAGAAAGCAC 59.428 40.000 0.00 0.00 0.00 4.40
4862 15448 5.242171 TGCAATGAATCAGAGAAAGAAAGCA 59.758 36.000 0.00 0.00 0.00 3.91
4863 15449 5.572126 GTGCAATGAATCAGAGAAAGAAAGC 59.428 40.000 0.00 0.00 0.00 3.51
4864 15450 6.675026 TGTGCAATGAATCAGAGAAAGAAAG 58.325 36.000 0.00 0.00 0.00 2.62
4865 15451 6.638096 TGTGCAATGAATCAGAGAAAGAAA 57.362 33.333 0.00 0.00 0.00 2.52
4866 15452 6.294342 CCTTGTGCAATGAATCAGAGAAAGAA 60.294 38.462 0.00 0.00 0.00 2.52
4867 15453 5.182570 CCTTGTGCAATGAATCAGAGAAAGA 59.817 40.000 0.00 0.00 0.00 2.52
4868 15454 5.182570 TCCTTGTGCAATGAATCAGAGAAAG 59.817 40.000 0.00 0.00 0.00 2.62
4869 15455 5.072055 TCCTTGTGCAATGAATCAGAGAAA 58.928 37.500 0.00 0.00 0.00 2.52
4870 15456 4.654915 TCCTTGTGCAATGAATCAGAGAA 58.345 39.130 0.00 0.00 0.00 2.87
4871 15457 4.290711 TCCTTGTGCAATGAATCAGAGA 57.709 40.909 0.00 0.00 0.00 3.10
4872 15458 4.882427 AGATCCTTGTGCAATGAATCAGAG 59.118 41.667 0.00 0.00 0.00 3.35
4873 15459 4.851843 AGATCCTTGTGCAATGAATCAGA 58.148 39.130 0.00 0.00 0.00 3.27
4874 15460 5.578005 AAGATCCTTGTGCAATGAATCAG 57.422 39.130 0.00 0.00 0.00 2.90
4875 15461 5.105635 GGAAAGATCCTTGTGCAATGAATCA 60.106 40.000 0.00 0.00 42.93 2.57
4876 15462 5.346522 GGAAAGATCCTTGTGCAATGAATC 58.653 41.667 0.00 0.00 42.93 2.52
4877 15463 5.334724 GGAAAGATCCTTGTGCAATGAAT 57.665 39.130 0.00 0.00 42.93 2.57
4878 15464 4.789012 GGAAAGATCCTTGTGCAATGAA 57.211 40.909 0.00 0.00 42.93 2.57
4890 15476 5.301555 GTGGCAAGATACTAGGAAAGATCC 58.698 45.833 0.00 0.00 46.98 3.36
4891 15477 4.985409 CGTGGCAAGATACTAGGAAAGATC 59.015 45.833 0.00 0.00 0.00 2.75
4892 15478 4.406003 ACGTGGCAAGATACTAGGAAAGAT 59.594 41.667 7.60 0.00 0.00 2.40
4893 15479 3.767673 ACGTGGCAAGATACTAGGAAAGA 59.232 43.478 7.60 0.00 0.00 2.52
4894 15480 4.124851 ACGTGGCAAGATACTAGGAAAG 57.875 45.455 7.60 0.00 0.00 2.62
4895 15481 4.546829 AACGTGGCAAGATACTAGGAAA 57.453 40.909 7.60 0.00 0.00 3.13
4896 15482 4.020928 TGAAACGTGGCAAGATACTAGGAA 60.021 41.667 7.60 0.00 0.00 3.36
4897 15483 3.512329 TGAAACGTGGCAAGATACTAGGA 59.488 43.478 7.60 0.00 0.00 2.94
4898 15484 3.857052 TGAAACGTGGCAAGATACTAGG 58.143 45.455 7.60 0.00 0.00 3.02
4899 15485 4.744570 TCTGAAACGTGGCAAGATACTAG 58.255 43.478 7.60 0.00 0.00 2.57
4900 15486 4.794278 TCTGAAACGTGGCAAGATACTA 57.206 40.909 7.60 0.00 0.00 1.82
4901 15487 3.678056 TCTGAAACGTGGCAAGATACT 57.322 42.857 7.60 0.00 0.00 2.12
4902 15488 4.391830 TGAATCTGAAACGTGGCAAGATAC 59.608 41.667 7.60 0.00 0.00 2.24
4903 15489 4.574892 TGAATCTGAAACGTGGCAAGATA 58.425 39.130 7.60 0.00 0.00 1.98
4904 15490 3.411446 TGAATCTGAAACGTGGCAAGAT 58.589 40.909 7.60 0.00 0.00 2.40
4905 15491 2.844946 TGAATCTGAAACGTGGCAAGA 58.155 42.857 7.60 0.00 0.00 3.02
4906 15492 3.837213 ATGAATCTGAAACGTGGCAAG 57.163 42.857 0.00 0.00 0.00 4.01
4907 15493 6.204688 GGATATATGAATCTGAAACGTGGCAA 59.795 38.462 0.00 0.00 0.00 4.52
4908 15494 5.700832 GGATATATGAATCTGAAACGTGGCA 59.299 40.000 0.00 0.00 0.00 4.92
4909 15495 5.700832 TGGATATATGAATCTGAAACGTGGC 59.299 40.000 0.00 0.00 0.00 5.01
4910 15496 6.147821 GGTGGATATATGAATCTGAAACGTGG 59.852 42.308 0.00 0.00 0.00 4.94
4911 15497 6.705825 TGGTGGATATATGAATCTGAAACGTG 59.294 38.462 0.00 0.00 0.00 4.49
4912 15498 6.826668 TGGTGGATATATGAATCTGAAACGT 58.173 36.000 0.00 0.00 0.00 3.99
4913 15499 7.728847 TTGGTGGATATATGAATCTGAAACG 57.271 36.000 0.00 0.00 0.00 3.60
4965 15551 4.221262 GGCGGAAACCTAACCCTAATTTTT 59.779 41.667 0.00 0.00 0.00 1.94
4966 15552 3.765511 GGCGGAAACCTAACCCTAATTTT 59.234 43.478 0.00 0.00 0.00 1.82
4967 15553 3.359033 GGCGGAAACCTAACCCTAATTT 58.641 45.455 0.00 0.00 0.00 1.82
4968 15554 2.681682 CGGCGGAAACCTAACCCTAATT 60.682 50.000 0.00 0.00 0.00 1.40
4969 15555 1.134310 CGGCGGAAACCTAACCCTAAT 60.134 52.381 0.00 0.00 0.00 1.73
4970 15556 0.249955 CGGCGGAAACCTAACCCTAA 59.750 55.000 0.00 0.00 0.00 2.69
4971 15557 0.614415 TCGGCGGAAACCTAACCCTA 60.614 55.000 7.21 0.00 0.00 3.53
4972 15558 1.482748 TTCGGCGGAAACCTAACCCT 61.483 55.000 7.21 0.00 0.00 4.34
4973 15559 1.003476 TTCGGCGGAAACCTAACCC 60.003 57.895 7.21 0.00 0.00 4.11
4974 15560 0.321034 AGTTCGGCGGAAACCTAACC 60.321 55.000 7.21 0.00 36.33 2.85
4975 15561 1.073964 GAGTTCGGCGGAAACCTAAC 58.926 55.000 7.21 1.69 36.02 2.34
4976 15562 0.680618 TGAGTTCGGCGGAAACCTAA 59.319 50.000 7.21 0.00 33.05 2.69
4977 15563 0.899720 ATGAGTTCGGCGGAAACCTA 59.100 50.000 7.21 0.00 33.05 3.08
4978 15564 0.391263 GATGAGTTCGGCGGAAACCT 60.391 55.000 7.21 2.59 33.05 3.50
4979 15565 0.391263 AGATGAGTTCGGCGGAAACC 60.391 55.000 7.21 4.37 33.05 3.27
4980 15566 1.000145 GAGATGAGTTCGGCGGAAAC 59.000 55.000 7.21 5.04 33.05 2.78
4981 15567 0.457853 CGAGATGAGTTCGGCGGAAA 60.458 55.000 7.21 0.00 33.05 3.13
4982 15568 1.138883 CGAGATGAGTTCGGCGGAA 59.861 57.895 7.21 2.05 34.56 4.30
4983 15569 2.798689 CGAGATGAGTTCGGCGGA 59.201 61.111 7.21 0.00 34.56 5.54
4988 15574 0.248134 GTCGGTCCGAGATGAGTTCG 60.248 60.000 15.95 0.00 36.23 3.95
4989 15575 0.100861 GGTCGGTCCGAGATGAGTTC 59.899 60.000 15.95 0.00 36.23 3.01
4990 15576 2.190756 GGTCGGTCCGAGATGAGTT 58.809 57.895 15.95 0.00 36.23 3.01
4991 15577 3.921521 GGTCGGTCCGAGATGAGT 58.078 61.111 15.95 0.00 36.23 3.41
5000 15586 3.842732 AAATTTCATTTCGGTCGGTCC 57.157 42.857 0.00 0.00 0.00 4.46
5009 15595 4.242475 GGTGGGACCGAAAATTTCATTTC 58.758 43.478 6.53 0.00 36.24 2.17
5010 15596 3.643792 TGGTGGGACCGAAAATTTCATTT 59.356 39.130 6.53 0.00 42.58 2.32
5011 15597 3.235200 TGGTGGGACCGAAAATTTCATT 58.765 40.909 6.53 0.00 42.58 2.57
5012 15598 2.883026 TGGTGGGACCGAAAATTTCAT 58.117 42.857 6.53 0.00 42.58 2.57
5013 15599 2.366640 TGGTGGGACCGAAAATTTCA 57.633 45.000 6.53 0.00 42.58 2.69
5014 15600 3.953712 ATTGGTGGGACCGAAAATTTC 57.046 42.857 0.00 0.00 42.58 2.17
5015 15601 3.244387 CCAATTGGTGGGACCGAAAATTT 60.244 43.478 16.90 0.00 44.64 1.82
5016 15602 2.301583 CCAATTGGTGGGACCGAAAATT 59.698 45.455 16.90 0.00 44.64 1.82
5017 15603 1.899142 CCAATTGGTGGGACCGAAAAT 59.101 47.619 16.90 0.00 44.64 1.82
5018 15604 1.333177 CCAATTGGTGGGACCGAAAA 58.667 50.000 16.90 0.00 44.64 2.29
5019 15605 3.043998 CCAATTGGTGGGACCGAAA 57.956 52.632 16.90 0.00 44.64 3.46
5020 15606 4.832741 CCAATTGGTGGGACCGAA 57.167 55.556 16.90 0.00 44.64 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.