Multiple sequence alignment - TraesCS5A01G177800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G177800 chr5A 100.000 7389 0 0 1 7389 375369754 375377142 0.000000e+00 13646.0
1 TraesCS5A01G177800 chr5A 81.443 291 49 5 428 716 521767762 521767475 4.460000e-57 233.0
2 TraesCS5A01G177800 chr5A 90.385 156 5 5 7136 7281 375552144 375552299 5.850000e-46 196.0
3 TraesCS5A01G177800 chr5A 100.000 44 0 0 7285 7328 375552328 375552371 1.710000e-11 82.4
4 TraesCS5A01G177800 chr5B 93.412 5677 229 62 718 6328 321410941 321416538 0.000000e+00 8277.0
5 TraesCS5A01G177800 chr5B 87.411 421 19 12 6629 7016 321417173 321417592 3.140000e-123 453.0
6 TraesCS5A01G177800 chr5B 85.959 292 26 3 1 288 321228744 321229024 1.560000e-76 298.0
7 TraesCS5A01G177800 chr5B 90.323 155 5 5 7137 7281 321532995 321533149 2.100000e-45 195.0
8 TraesCS5A01G177800 chr5B 89.147 129 8 3 6505 6627 321416978 321417106 9.930000e-34 156.0
9 TraesCS5A01G177800 chr5B 91.919 99 8 0 6402 6500 321416814 321416912 1.000000e-28 139.0
10 TraesCS5A01G177800 chr5B 94.318 88 3 2 7137 7222 321474317 321474404 4.650000e-27 134.0
11 TraesCS5A01G177800 chr5B 92.000 75 4 1 7009 7081 655043304 655043230 3.650000e-18 104.0
12 TraesCS5A01G177800 chr5B 97.500 40 1 0 7279 7318 321474473 321474512 1.330000e-07 69.4
13 TraesCS5A01G177800 chr5D 94.886 3911 143 32 427 4295 283013565 283017460 0.000000e+00 6061.0
14 TraesCS5A01G177800 chr5D 97.371 1826 39 4 4498 6323 283017457 283019273 0.000000e+00 3097.0
15 TraesCS5A01G177800 chr5D 90.596 638 36 3 6402 7015 283019508 283020145 0.000000e+00 824.0
16 TraesCS5A01G177800 chr5D 83.163 392 37 8 1 368 283012557 283012943 1.540000e-86 331.0
17 TraesCS5A01G177800 chr5D 81.690 284 47 5 424 705 455809803 455810083 1.600000e-56 231.0
18 TraesCS5A01G177800 chr5D 92.053 151 6 3 7137 7281 283344189 283344339 2.700000e-49 207.0
19 TraesCS5A01G177800 chr5D 91.781 73 5 1 6328 6399 283019337 283019409 4.720000e-17 100.0
20 TraesCS5A01G177800 chr1D 85.017 287 40 2 427 712 365430228 365430512 9.380000e-74 289.0
21 TraesCS5A01G177800 chr3D 84.354 294 42 3 427 717 580128225 580128517 1.210000e-72 285.0
22 TraesCS5A01G177800 chr3B 84.722 288 40 4 427 712 748466978 748466693 1.210000e-72 285.0
23 TraesCS5A01G177800 chr3B 92.208 77 4 1 7007 7081 770342971 770343047 2.820000e-19 108.0
24 TraesCS5A01G177800 chr3B 93.333 45 3 0 31 75 636736038 636736082 4.780000e-07 67.6
25 TraesCS5A01G177800 chr3A 84.669 287 42 2 427 712 697287445 697287160 1.210000e-72 285.0
26 TraesCS5A01G177800 chr3A 81.034 290 53 2 427 715 16154308 16154020 5.770000e-56 230.0
27 TraesCS5A01G177800 chr3A 91.026 78 5 1 7006 7081 721624054 721623977 3.650000e-18 104.0
28 TraesCS5A01G177800 chr7D 82.667 300 49 3 427 725 5318668 5318965 5.690000e-66 263.0
29 TraesCS5A01G177800 chr7D 91.026 78 5 1 7006 7081 90586727 90586804 3.650000e-18 104.0
30 TraesCS5A01G177800 chr7D 88.372 86 6 3 6999 7081 629185746 629185830 4.720000e-17 100.0
31 TraesCS5A01G177800 chr2A 92.500 80 4 1 7004 7081 733526207 733526286 6.060000e-21 113.0
32 TraesCS5A01G177800 chr2A 91.026 78 5 1 7006 7081 385337113 385337036 3.650000e-18 104.0
33 TraesCS5A01G177800 chr1A 89.286 84 7 1 7005 7086 105304772 105304689 3.650000e-18 104.0
34 TraesCS5A01G177800 chr6D 90.123 81 4 3 7003 7081 4701312 4701390 1.310000e-17 102.0
35 TraesCS5A01G177800 chr1B 91.667 72 1 3 7137 7203 634288566 634288637 2.190000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G177800 chr5A 375369754 375377142 7388 False 13646.00 13646 100.00000 1 7389 1 chr5A.!!$F1 7388
1 TraesCS5A01G177800 chr5B 321410941 321417592 6651 False 2256.25 8277 90.47225 718 7016 4 chr5B.!!$F3 6298
2 TraesCS5A01G177800 chr5D 283012557 283020145 7588 False 2082.60 6061 91.55940 1 7015 5 chr5D.!!$F3 7014

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
604 1195 0.179145 CGACTTATTCTGACGGCGGT 60.179 55.000 13.24 0.0 0.00 5.68 F
1461 2089 0.110056 GTGGAGCAGCACACATTTCG 60.110 55.000 13.62 0.0 37.54 3.46 F
1610 2271 0.792640 CACTGTCCTGTCGAATGTGC 59.207 55.000 0.00 0.0 0.00 4.57 F
1614 2275 1.069978 TGTCCTGTCGAATGTGCAGAA 59.930 47.619 1.78 0.0 32.39 3.02 F
4018 4692 0.165079 GCCATTCGGTGTGTTGTACG 59.835 55.000 0.00 0.0 33.28 3.67 F
4055 4729 0.480690 TTCCTTGGGCCTGTGCTTTA 59.519 50.000 4.53 0.0 37.74 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1586 2247 2.363788 TTCGACAGGACAGTGCATAC 57.636 50.000 0.00 0.0 0.00 2.39 R
3458 4131 4.211164 TGTTGCAAGATAGTCAAGAACGTG 59.789 41.667 0.00 0.0 0.00 4.49 R
3769 4442 4.340381 GCAAAGTATTGATCTTCCCTGCAT 59.660 41.667 0.00 0.0 38.94 3.96 R
4055 4729 2.179427 GCAGGGGCCTGTAAAAATTCT 58.821 47.619 0.84 0.0 45.24 2.40 R
6116 6794 0.389817 CCTTTCTGGTCGTCATCGCA 60.390 55.000 0.00 0.0 36.96 5.10 R
6399 7222 0.981183 ACTCCTTCATACAACGGGCA 59.019 50.000 0.00 0.0 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.990818 AAGCCATCCCCTCCTCCTTC 60.991 60.000 0.00 0.00 0.00 3.46
21 22 1.004758 CCATCCCCTCCTCCTTCCA 59.995 63.158 0.00 0.00 0.00 3.53
22 23 0.402566 CCATCCCCTCCTCCTTCCAT 60.403 60.000 0.00 0.00 0.00 3.41
24 25 1.144503 CATCCCCTCCTCCTTCCATTG 59.855 57.143 0.00 0.00 0.00 2.82
25 26 0.421495 TCCCCTCCTCCTTCCATTGA 59.579 55.000 0.00 0.00 0.00 2.57
26 27 0.548510 CCCCTCCTCCTTCCATTGAC 59.451 60.000 0.00 0.00 0.00 3.18
27 28 1.589414 CCCTCCTCCTTCCATTGACT 58.411 55.000 0.00 0.00 0.00 3.41
28 29 1.211457 CCCTCCTCCTTCCATTGACTG 59.789 57.143 0.00 0.00 0.00 3.51
29 30 1.912043 CCTCCTCCTTCCATTGACTGT 59.088 52.381 0.00 0.00 0.00 3.55
30 31 2.093235 CCTCCTCCTTCCATTGACTGTC 60.093 54.545 0.00 0.00 0.00 3.51
31 32 2.568956 CTCCTCCTTCCATTGACTGTCA 59.431 50.000 6.36 6.36 0.00 3.58
32 33 2.978978 TCCTCCTTCCATTGACTGTCAA 59.021 45.455 23.94 23.94 41.09 3.18
56 59 2.167075 CCCTTTTCATCTCCACCATTGC 59.833 50.000 0.00 0.00 0.00 3.56
78 81 5.709631 TGCAATAAACTCTTCCTTGTATGCA 59.290 36.000 0.00 0.00 0.00 3.96
79 82 6.030228 GCAATAAACTCTTCCTTGTATGCAC 58.970 40.000 0.00 0.00 0.00 4.57
93 96 1.422531 ATGCACCAACACCACCATTT 58.577 45.000 0.00 0.00 0.00 2.32
95 98 2.388735 TGCACCAACACCACCATTTTA 58.611 42.857 0.00 0.00 0.00 1.52
109 112 6.322712 ACCACCATTTTACTTGACTTGCTTTA 59.677 34.615 0.00 0.00 0.00 1.85
121 124 7.121315 ACTTGACTTGCTTTACATATTTCCCTC 59.879 37.037 0.00 0.00 0.00 4.30
127 130 5.833131 TGCTTTACATATTTCCCTCCATTCC 59.167 40.000 0.00 0.00 0.00 3.01
129 132 5.897851 TTACATATTTCCCTCCATTCCGA 57.102 39.130 0.00 0.00 0.00 4.55
134 137 7.294584 ACATATTTCCCTCCATTCCGAAAATA 58.705 34.615 0.00 0.00 0.00 1.40
136 139 4.855298 TTCCCTCCATTCCGAAAATACT 57.145 40.909 0.00 0.00 0.00 2.12
244 247 3.326588 AGCATACACACACCCTACTCAAA 59.673 43.478 0.00 0.00 0.00 2.69
353 378 8.976986 AAGATGAACTGATAAAAATGACTTGC 57.023 30.769 0.00 0.00 0.00 4.01
355 380 9.453572 AGATGAACTGATAAAAATGACTTGCTA 57.546 29.630 0.00 0.00 0.00 3.49
356 381 9.713740 GATGAACTGATAAAAATGACTTGCTAG 57.286 33.333 0.00 0.00 0.00 3.42
370 565 2.890808 TGCTAGCGCTGCTTTAGTAT 57.109 45.000 22.90 0.00 40.44 2.12
377 572 6.420008 GCTAGCGCTGCTTTAGTATTTACTTA 59.580 38.462 22.90 0.00 40.44 2.24
447 1038 5.036737 GTGATTTGGTGTCAGTTGTTTCAG 58.963 41.667 0.00 0.00 0.00 3.02
448 1039 4.097741 TGATTTGGTGTCAGTTGTTTCAGG 59.902 41.667 0.00 0.00 0.00 3.86
455 1046 5.531287 GGTGTCAGTTGTTTCAGGTCTATTT 59.469 40.000 0.00 0.00 0.00 1.40
456 1047 6.430451 GTGTCAGTTGTTTCAGGTCTATTTG 58.570 40.000 0.00 0.00 0.00 2.32
459 1050 5.070001 CAGTTGTTTCAGGTCTATTTGGGA 58.930 41.667 0.00 0.00 0.00 4.37
472 1063 5.411669 GTCTATTTGGGAGTTCAACGACAAT 59.588 40.000 0.00 0.00 0.00 2.71
475 1066 3.417069 TGGGAGTTCAACGACAATGAT 57.583 42.857 0.00 0.00 0.00 2.45
483 1074 0.881118 AACGACAATGATTGCGGCTT 59.119 45.000 20.01 8.56 35.52 4.35
505 1096 3.400054 GCGCTGGTCCTTAGGGGT 61.400 66.667 0.00 0.00 36.25 4.95
513 1104 0.828677 GTCCTTAGGGGTACGTGCAT 59.171 55.000 5.86 0.00 36.25 3.96
518 1109 1.855295 TAGGGGTACGTGCATGAAGA 58.145 50.000 14.17 0.00 0.00 2.87
522 1113 2.423577 GGGTACGTGCATGAAGACTTT 58.576 47.619 14.17 0.00 0.00 2.66
524 1115 3.326747 GGTACGTGCATGAAGACTTTCT 58.673 45.455 14.17 0.00 34.31 2.52
547 1138 2.868044 GCTGTCATCGACAAGGTCAAGT 60.868 50.000 0.00 0.00 42.26 3.16
554 1145 0.670854 GACAAGGTCAAGTCGCCTCC 60.671 60.000 0.00 0.00 33.24 4.30
556 1147 1.906824 AAGGTCAAGTCGCCTCCGA 60.907 57.895 0.00 0.00 42.01 4.55
557 1148 1.258445 AAGGTCAAGTCGCCTCCGAT 61.258 55.000 0.00 0.00 46.38 4.18
573 1164 1.922570 CGATAGGGGAACAACGACAG 58.077 55.000 0.00 0.00 0.00 3.51
575 1166 0.981183 ATAGGGGAACAACGACAGCA 59.019 50.000 0.00 0.00 0.00 4.41
576 1167 0.320374 TAGGGGAACAACGACAGCAG 59.680 55.000 0.00 0.00 0.00 4.24
580 1171 3.893914 GAACAACGACAGCAGCGCG 62.894 63.158 0.00 0.00 0.00 6.86
591 1182 2.202260 CAGCGCGTCGACGACTTA 60.202 61.111 39.74 0.00 43.02 2.24
604 1195 0.179145 CGACTTATTCTGACGGCGGT 60.179 55.000 13.24 0.00 0.00 5.68
606 1197 2.728922 GACTTATTCTGACGGCGGTAG 58.271 52.381 13.24 9.21 0.00 3.18
611 1202 0.608856 TTCTGACGGCGGTAGTGGTA 60.609 55.000 13.24 0.00 0.00 3.25
624 1215 1.254954 AGTGGTAGTTCGGTGGTCTC 58.745 55.000 0.00 0.00 0.00 3.36
626 1217 1.246056 TGGTAGTTCGGTGGTCTCGG 61.246 60.000 0.00 0.00 0.00 4.63
632 1223 1.067071 GTTCGGTGGTCTCGGAATCTT 60.067 52.381 0.00 0.00 0.00 2.40
638 1229 3.600388 GTGGTCTCGGAATCTTGATGTT 58.400 45.455 0.00 0.00 0.00 2.71
640 1231 5.360591 GTGGTCTCGGAATCTTGATGTTAT 58.639 41.667 0.00 0.00 0.00 1.89
690 1284 8.095792 TGTACTTCCGGTGAACTTTGATAATAA 58.904 33.333 0.00 0.00 0.00 1.40
696 1290 7.282224 TCCGGTGAACTTTGATAATAAATCTGG 59.718 37.037 0.00 0.00 0.00 3.86
1103 1701 0.669318 TTCGCTTCTCGCCGTTCATT 60.669 50.000 0.00 0.00 38.27 2.57
1104 1702 1.076533 TCGCTTCTCGCCGTTCATTC 61.077 55.000 0.00 0.00 38.27 2.67
1151 1766 1.940294 GCTGATCGCTGATCTGGATGG 60.940 57.143 19.07 1.05 39.56 3.51
1308 1929 5.296531 TGCGACCGTAGAGTAACACAATATA 59.703 40.000 0.00 0.00 0.00 0.86
1348 1975 5.215160 CACTTGCTACAATGTTCTGTTTCC 58.785 41.667 0.00 0.00 0.00 3.13
1391 2018 6.404734 GCGAATCCTGGAATCAGTTAATTGTT 60.405 38.462 12.06 0.00 39.31 2.83
1408 2035 1.248486 GTTTGGAGCTCCTGAAACCC 58.752 55.000 32.28 11.50 36.82 4.11
1413 2040 1.209747 GGAGCTCCTGAAACCCGTAAT 59.790 52.381 26.25 0.00 0.00 1.89
1417 2044 2.421529 GCTCCTGAAACCCGTAATGGAT 60.422 50.000 0.00 0.00 42.00 3.41
1456 2084 2.882677 ATCCGTGGAGCAGCACACA 61.883 57.895 17.31 0.97 37.45 3.72
1461 2089 0.110056 GTGGAGCAGCACACATTTCG 60.110 55.000 13.62 0.00 37.54 3.46
1469 2097 3.357021 CAGCACACATTTCGACATATGC 58.643 45.455 1.58 6.54 0.00 3.14
1564 2225 4.469945 CCTGGAGTCCTAATGGTCTGTAAA 59.530 45.833 11.33 0.00 32.02 2.01
1602 2263 3.664107 TGAAAGTATGCACTGTCCTGTC 58.336 45.455 0.00 0.00 38.14 3.51
1605 2266 1.893137 AGTATGCACTGTCCTGTCGAA 59.107 47.619 0.00 0.00 32.25 3.71
1610 2271 0.792640 CACTGTCCTGTCGAATGTGC 59.207 55.000 0.00 0.00 0.00 4.57
1614 2275 1.069978 TGTCCTGTCGAATGTGCAGAA 59.930 47.619 1.78 0.00 32.39 3.02
1636 2297 9.778993 CAGAACACATAATTTCATGAGTTTAGG 57.221 33.333 0.00 2.99 39.04 2.69
1653 2314 4.412796 TTAGGAGACATGATTGCTGAGG 57.587 45.455 0.00 0.00 0.00 3.86
1669 2330 9.622004 GATTGCTGAGGTATATTTGATCAATTG 57.378 33.333 9.40 0.00 0.00 2.32
1693 2354 9.638239 TTGGTGATTGATATTGCTTAAAGAAAC 57.362 29.630 0.00 0.00 0.00 2.78
1698 2359 7.466746 TTGATATTGCTTAAAGAAACCTGCT 57.533 32.000 0.00 0.00 0.00 4.24
1715 2376 4.528596 ACCTGCTGTCAGTAGATAGTTTGT 59.471 41.667 18.55 4.06 38.66 2.83
1788 2449 5.648960 TCTGATTGCATTTTGAGATGTGCTA 59.351 36.000 0.00 0.00 38.37 3.49
2131 2793 3.819368 TCACATGCTGTTGAGGAAAAGA 58.181 40.909 0.00 0.00 0.00 2.52
2332 2994 1.875488 TAGGTTTACCCCCTCAGAGC 58.125 55.000 0.00 0.00 36.42 4.09
2493 3155 6.490381 AGGTTTAAGTTCAAAATCTCTGTCCC 59.510 38.462 0.00 0.00 0.00 4.46
2631 3297 3.961408 TCCTAGTCTATGGCCTCTTGTTC 59.039 47.826 3.32 0.00 0.00 3.18
2966 3632 4.887748 AGTTCATCAGTCTAACCACACTG 58.112 43.478 0.00 0.00 41.32 3.66
3017 3686 8.408601 CCATATAGTTGTGATTTAGCAGCTTTT 58.591 33.333 0.00 0.00 0.00 2.27
3359 4032 8.995220 TGCTTCCGTGGTAATTAATTCATATAC 58.005 33.333 3.39 0.00 0.00 1.47
3769 4442 2.865119 ATCTGATATGGCGGCATTCA 57.135 45.000 30.54 26.62 0.00 2.57
4018 4692 0.165079 GCCATTCGGTGTGTTGTACG 59.835 55.000 0.00 0.00 33.28 3.67
4055 4729 0.480690 TTCCTTGGGCCTGTGCTTTA 59.519 50.000 4.53 0.00 37.74 1.85
4295 4970 6.791303 AGATGCGTCAGTTTTTGAACTTTTA 58.209 32.000 8.99 0.00 37.61 1.52
4302 4977 9.000018 CGTCAGTTTTTGAACTTTTAGAGAAAG 58.000 33.333 0.00 0.00 37.61 2.62
4326 5001 1.379527 CCCACTCGAGTAATTTGCCC 58.620 55.000 19.57 0.00 0.00 5.36
4389 5064 5.701224 ACTTCTAACTGAATTGGGTGGAAA 58.299 37.500 0.00 0.00 33.71 3.13
4419 5094 8.608844 ACTTCAACTACTTCTAACTGAATTGG 57.391 34.615 0.00 0.00 33.71 3.16
4467 5142 7.161404 TGAGTTTGTACTACAGAATGCAGATT 58.839 34.615 0.00 0.00 34.87 2.40
4492 5167 3.636300 CTCAGTCACTAGCTTAGCATCCT 59.364 47.826 7.07 0.00 0.00 3.24
4538 5214 4.503741 TGCTAGGCACTTGAAAAATGAC 57.496 40.909 0.00 0.00 41.75 3.06
4614 5290 6.145534 TCGTCAAAACAATACTGTGATCTCAC 59.854 38.462 3.34 3.34 46.59 3.51
4680 5356 7.012894 TGGTTATTTGGATAGATTTAAGCGGTG 59.987 37.037 0.00 0.00 0.00 4.94
4739 5415 8.797438 CAGGATAGCTATGTCAGTAGATTGTTA 58.203 37.037 11.94 0.00 0.00 2.41
5136 5812 7.232534 TCACTGTTAAGGGTTATGAAAGCATTT 59.767 33.333 0.00 0.00 43.98 2.32
5137 5813 7.872483 CACTGTTAAGGGTTATGAAAGCATTTT 59.128 33.333 0.00 0.00 39.27 1.82
5252 5929 6.199393 GTGGAAGACATCACACAGTTTTTAC 58.801 40.000 0.00 0.00 34.32 2.01
5255 5932 7.771361 TGGAAGACATCACACAGTTTTTACTTA 59.229 33.333 0.00 0.00 0.00 2.24
5262 5939 9.965824 CATCACACAGTTTTTACTTATCCTTTT 57.034 29.630 0.00 0.00 0.00 2.27
5529 6207 4.141733 TGGACTTCTGTTCACACTGATCAA 60.142 41.667 0.00 0.00 31.47 2.57
5579 6257 8.540388 ACTACTCTTTCTGTAGCAATATTTCCA 58.460 33.333 0.00 0.00 40.56 3.53
5671 6349 7.334421 TGCTTATGTGAATTCTACCTGAACTTC 59.666 37.037 7.05 0.00 37.52 3.01
5841 6519 3.937706 GCTACATCTTCAAGTCATGCACT 59.062 43.478 0.00 0.00 36.64 4.40
5865 6543 5.627499 TCCAAAGTACATCATTGTCTTGC 57.373 39.130 0.00 0.00 37.28 4.01
5866 6544 5.069318 TCCAAAGTACATCATTGTCTTGCA 58.931 37.500 0.00 0.00 37.28 4.08
5880 6558 4.460263 TGTCTTGCAGTTACCATGACTTT 58.540 39.130 0.00 0.00 37.89 2.66
5883 6561 4.887071 TCTTGCAGTTACCATGACTTTTGT 59.113 37.500 0.00 0.00 0.00 2.83
5954 6632 5.048083 TGCTAAAATCAAATCCAGCTTCGTT 60.048 36.000 0.00 0.00 0.00 3.85
6080 6758 4.653341 ACTTCATCCTTCATCTCGGATCTT 59.347 41.667 0.00 0.00 37.93 2.40
6107 6785 2.154798 CTGTCGTCGAAGCCCTTCCA 62.155 60.000 0.00 0.00 36.27 3.53
6116 6794 0.918310 AAGCCCTTCCATCTGCCTCT 60.918 55.000 0.00 0.00 0.00 3.69
6123 6801 1.044790 TCCATCTGCCTCTGCGATGA 61.045 55.000 15.68 0.90 44.19 2.92
6323 7001 3.255725 TGGCGATTGTAACTAGAAACCG 58.744 45.455 0.00 0.00 0.00 4.44
6330 7067 7.096722 GCGATTGTAACTAGAAACCGTATACAG 60.097 40.741 3.32 0.00 0.00 2.74
6357 7094 1.348064 TCTGGGCGAGAAAGAAAGGA 58.652 50.000 0.00 0.00 0.00 3.36
6399 7222 4.997395 GTCTTGCCCATAACATATCGACAT 59.003 41.667 0.00 0.00 0.00 3.06
6400 7223 4.996758 TCTTGCCCATAACATATCGACATG 59.003 41.667 1.18 1.18 0.00 3.21
6472 7391 5.468746 TGCTTATATACTGGCGCTTAAAAGG 59.531 40.000 7.64 0.00 0.00 3.11
6491 7410 2.304761 AGGGTACATGGTCACATCGTTT 59.695 45.455 0.00 0.00 34.35 3.60
6500 7419 4.247258 TGGTCACATCGTTTACCATGTAC 58.753 43.478 0.00 0.00 37.09 2.90
6503 7483 4.030977 GTCACATCGTTTACCATGTACGTC 59.969 45.833 0.00 0.00 36.70 4.34
6591 7573 8.980481 AATTAGTGCTAGTTTATATGCAAGGT 57.020 30.769 0.00 0.00 37.17 3.50
6592 7574 8.608844 ATTAGTGCTAGTTTATATGCAAGGTC 57.391 34.615 0.00 0.00 37.17 3.85
6593 7575 6.240549 AGTGCTAGTTTATATGCAAGGTCT 57.759 37.500 0.00 0.00 37.17 3.85
6594 7576 6.653989 AGTGCTAGTTTATATGCAAGGTCTT 58.346 36.000 0.00 0.00 37.17 3.01
6713 7764 2.460918 CGTTCTGACAGTCTGACGTTT 58.539 47.619 6.91 0.00 0.00 3.60
6756 7808 8.392612 GTCATCAAGGCATTTTATTCATTTTGG 58.607 33.333 0.00 0.00 0.00 3.28
6758 7810 5.647225 TCAAGGCATTTTATTCATTTTGGCC 59.353 36.000 0.00 0.00 39.14 5.36
6802 7862 2.386661 ATCTGACGTTCGCTGGAAAT 57.613 45.000 0.00 0.00 33.05 2.17
6845 7905 7.424803 TGATTCTTGATCGCAAAGAAAAGAAA 58.575 30.769 9.90 0.00 43.06 2.52
6846 7906 7.379529 TGATTCTTGATCGCAAAGAAAAGAAAC 59.620 33.333 9.90 6.17 43.06 2.78
6847 7907 5.204833 TCTTGATCGCAAAGAAAAGAAACG 58.795 37.500 0.00 0.00 34.61 3.60
6905 7989 5.298276 TCTGTATATGTACACGCACTGATCA 59.702 40.000 0.00 0.00 35.94 2.92
6906 7990 5.278604 TGTATATGTACACGCACTGATCAC 58.721 41.667 0.00 0.00 35.94 3.06
7016 8100 8.101419 CAGGTTAACCTCCTTTTCATTAGTACT 58.899 37.037 24.73 0.00 46.65 2.73
7017 8101 8.666821 AGGTTAACCTCCTTTTCATTAGTACTT 58.333 33.333 21.96 0.00 44.77 2.24
7018 8102 8.944029 GGTTAACCTCCTTTTCATTAGTACTTC 58.056 37.037 17.83 0.00 0.00 3.01
7019 8103 8.944029 GTTAACCTCCTTTTCATTAGTACTTCC 58.056 37.037 0.00 0.00 0.00 3.46
7020 8104 6.954352 ACCTCCTTTTCATTAGTACTTCCT 57.046 37.500 0.00 0.00 0.00 3.36
7021 8105 7.331089 ACCTCCTTTTCATTAGTACTTCCTT 57.669 36.000 0.00 0.00 0.00 3.36
7022 8106 7.756614 ACCTCCTTTTCATTAGTACTTCCTTT 58.243 34.615 0.00 0.00 0.00 3.11
7023 8107 8.887393 ACCTCCTTTTCATTAGTACTTCCTTTA 58.113 33.333 0.00 0.00 0.00 1.85
7024 8108 9.907229 CCTCCTTTTCATTAGTACTTCCTTTAT 57.093 33.333 0.00 0.00 0.00 1.40
7102 8186 8.732413 TTAGGTACGTATATAATTGCTCAACG 57.268 34.615 0.00 0.00 35.17 4.10
7103 8187 6.154445 AGGTACGTATATAATTGCTCAACGG 58.846 40.000 0.00 0.00 33.44 4.44
7104 8188 5.346822 GGTACGTATATAATTGCTCAACGGG 59.653 44.000 0.00 0.00 33.44 5.28
7105 8189 5.204409 ACGTATATAATTGCTCAACGGGA 57.796 39.130 0.00 0.00 33.44 5.14
7106 8190 5.603596 ACGTATATAATTGCTCAACGGGAA 58.396 37.500 0.00 0.00 33.44 3.97
7107 8191 6.050432 ACGTATATAATTGCTCAACGGGAAA 58.950 36.000 0.00 0.00 33.44 3.13
7108 8192 6.708949 ACGTATATAATTGCTCAACGGGAAAT 59.291 34.615 0.00 0.00 33.44 2.17
7109 8193 7.015289 CGTATATAATTGCTCAACGGGAAATG 58.985 38.462 0.00 0.00 0.00 2.32
7110 8194 6.959639 ATATAATTGCTCAACGGGAAATGT 57.040 33.333 0.00 0.00 0.00 2.71
7111 8195 3.302365 AATTGCTCAACGGGAAATGTG 57.698 42.857 0.00 0.00 0.00 3.21
7112 8196 1.974265 TTGCTCAACGGGAAATGTGA 58.026 45.000 0.00 0.00 0.00 3.58
7113 8197 1.974265 TGCTCAACGGGAAATGTGAA 58.026 45.000 0.00 0.00 0.00 3.18
7114 8198 2.513753 TGCTCAACGGGAAATGTGAAT 58.486 42.857 0.00 0.00 0.00 2.57
7115 8199 2.228582 TGCTCAACGGGAAATGTGAATG 59.771 45.455 0.00 0.00 0.00 2.67
7116 8200 2.487762 GCTCAACGGGAAATGTGAATGA 59.512 45.455 0.00 0.00 0.00 2.57
7117 8201 3.670627 GCTCAACGGGAAATGTGAATGAC 60.671 47.826 0.00 0.00 0.00 3.06
7118 8202 3.481453 TCAACGGGAAATGTGAATGACA 58.519 40.909 0.00 0.00 39.53 3.58
7119 8203 3.885901 TCAACGGGAAATGTGAATGACAA 59.114 39.130 0.00 0.00 38.36 3.18
7120 8204 4.522405 TCAACGGGAAATGTGAATGACAAT 59.478 37.500 0.00 0.00 38.36 2.71
7121 8205 5.010516 TCAACGGGAAATGTGAATGACAATT 59.989 36.000 0.00 0.00 38.36 2.32
7122 8206 5.467035 ACGGGAAATGTGAATGACAATTT 57.533 34.783 0.00 0.00 38.36 1.82
7123 8207 5.469479 ACGGGAAATGTGAATGACAATTTC 58.531 37.500 0.00 0.00 38.36 2.17
7124 8208 5.010516 ACGGGAAATGTGAATGACAATTTCA 59.989 36.000 10.29 0.76 38.36 2.69
7136 8220 6.764308 ATGACAATTTCATTACAGGGACAG 57.236 37.500 0.00 0.00 42.87 3.51
7137 8221 4.458989 TGACAATTTCATTACAGGGACAGC 59.541 41.667 0.00 0.00 0.00 4.40
7138 8222 3.763897 ACAATTTCATTACAGGGACAGCC 59.236 43.478 0.00 0.00 0.00 4.85
7139 8223 2.107950 TTTCATTACAGGGACAGCCG 57.892 50.000 0.00 0.00 33.83 5.52
7140 8224 0.981183 TTCATTACAGGGACAGCCGT 59.019 50.000 0.00 0.00 33.83 5.68
7141 8225 1.855295 TCATTACAGGGACAGCCGTA 58.145 50.000 0.00 0.00 33.83 4.02
7142 8226 2.181125 TCATTACAGGGACAGCCGTAA 58.819 47.619 0.00 0.00 33.83 3.18
7143 8227 2.167693 TCATTACAGGGACAGCCGTAAG 59.832 50.000 0.00 0.00 33.83 2.34
7144 8228 0.248289 TTACAGGGACAGCCGTAAGC 59.752 55.000 0.00 0.00 44.25 3.09
7165 8249 4.526970 CATCACTTGCTAGCACATACAC 57.473 45.455 19.17 0.00 0.00 2.90
7166 8250 3.676291 TCACTTGCTAGCACATACACA 57.324 42.857 19.17 0.00 0.00 3.72
7167 8251 3.588955 TCACTTGCTAGCACATACACAG 58.411 45.455 19.17 12.84 0.00 3.66
7168 8252 2.094894 CACTTGCTAGCACATACACAGC 59.905 50.000 19.17 0.00 0.00 4.40
7169 8253 1.667724 CTTGCTAGCACATACACAGCC 59.332 52.381 19.17 0.00 0.00 4.85
7170 8254 0.904649 TGCTAGCACATACACAGCCT 59.095 50.000 14.93 0.00 0.00 4.58
7171 8255 1.278985 TGCTAGCACATACACAGCCTT 59.721 47.619 14.93 0.00 0.00 4.35
7172 8256 2.290260 TGCTAGCACATACACAGCCTTT 60.290 45.455 14.93 0.00 0.00 3.11
7173 8257 2.352960 GCTAGCACATACACAGCCTTTC 59.647 50.000 10.63 0.00 0.00 2.62
7174 8258 2.867109 AGCACATACACAGCCTTTCT 57.133 45.000 0.00 0.00 0.00 2.52
7175 8259 2.704572 AGCACATACACAGCCTTTCTC 58.295 47.619 0.00 0.00 0.00 2.87
7176 8260 2.304180 AGCACATACACAGCCTTTCTCT 59.696 45.455 0.00 0.00 0.00 3.10
7177 8261 3.515502 AGCACATACACAGCCTTTCTCTA 59.484 43.478 0.00 0.00 0.00 2.43
7178 8262 3.868077 GCACATACACAGCCTTTCTCTAG 59.132 47.826 0.00 0.00 0.00 2.43
7179 8263 4.382040 GCACATACACAGCCTTTCTCTAGA 60.382 45.833 0.00 0.00 0.00 2.43
7180 8264 5.724328 CACATACACAGCCTTTCTCTAGAA 58.276 41.667 0.00 0.00 0.00 2.10
7181 8265 6.344500 CACATACACAGCCTTTCTCTAGAAT 58.656 40.000 0.00 0.00 33.54 2.40
7182 8266 6.820656 CACATACACAGCCTTTCTCTAGAATT 59.179 38.462 0.00 0.00 33.54 2.17
7183 8267 7.981789 CACATACACAGCCTTTCTCTAGAATTA 59.018 37.037 0.00 0.00 33.54 1.40
7184 8268 8.200792 ACATACACAGCCTTTCTCTAGAATTAG 58.799 37.037 0.00 0.00 33.54 1.73
7185 8269 6.613153 ACACAGCCTTTCTCTAGAATTAGT 57.387 37.500 0.00 0.00 33.54 2.24
7186 8270 7.010339 ACACAGCCTTTCTCTAGAATTAGTT 57.990 36.000 0.00 0.00 33.54 2.24
7187 8271 6.876257 ACACAGCCTTTCTCTAGAATTAGTTG 59.124 38.462 0.00 0.00 33.54 3.16
7188 8272 6.314896 CACAGCCTTTCTCTAGAATTAGTTGG 59.685 42.308 0.00 0.00 33.54 3.77
7189 8273 6.013293 ACAGCCTTTCTCTAGAATTAGTTGGT 60.013 38.462 0.00 0.00 33.54 3.67
7190 8274 6.314896 CAGCCTTTCTCTAGAATTAGTTGGTG 59.685 42.308 0.00 0.00 33.54 4.17
7191 8275 6.213600 AGCCTTTCTCTAGAATTAGTTGGTGA 59.786 38.462 0.00 0.00 33.54 4.02
7192 8276 6.879458 GCCTTTCTCTAGAATTAGTTGGTGAA 59.121 38.462 0.00 0.00 33.54 3.18
7193 8277 7.390718 GCCTTTCTCTAGAATTAGTTGGTGAAA 59.609 37.037 0.00 0.00 33.54 2.69
7194 8278 8.722394 CCTTTCTCTAGAATTAGTTGGTGAAAC 58.278 37.037 0.00 0.00 34.95 2.78
7195 8279 9.273016 CTTTCTCTAGAATTAGTTGGTGAAACA 57.727 33.333 0.00 0.00 36.17 2.83
7196 8280 8.833231 TTCTCTAGAATTAGTTGGTGAAACAG 57.167 34.615 0.00 0.00 41.61 3.16
7197 8281 8.190326 TCTCTAGAATTAGTTGGTGAAACAGA 57.810 34.615 0.00 0.00 41.61 3.41
7198 8282 8.647796 TCTCTAGAATTAGTTGGTGAAACAGAA 58.352 33.333 0.00 0.00 41.61 3.02
7199 8283 9.273016 CTCTAGAATTAGTTGGTGAAACAGAAA 57.727 33.333 0.00 0.00 41.61 2.52
7200 8284 9.273016 TCTAGAATTAGTTGGTGAAACAGAAAG 57.727 33.333 0.00 0.00 41.61 2.62
7201 8285 9.273016 CTAGAATTAGTTGGTGAAACAGAAAGA 57.727 33.333 0.00 0.00 41.61 2.52
7202 8286 8.159344 AGAATTAGTTGGTGAAACAGAAAGAG 57.841 34.615 0.00 0.00 41.61 2.85
7203 8287 7.993183 AGAATTAGTTGGTGAAACAGAAAGAGA 59.007 33.333 0.00 0.00 41.61 3.10
7204 8288 8.519799 AATTAGTTGGTGAAACAGAAAGAGAA 57.480 30.769 0.00 0.00 41.61 2.87
7205 8289 7.931578 TTAGTTGGTGAAACAGAAAGAGAAA 57.068 32.000 0.00 0.00 41.61 2.52
7206 8290 6.834168 AGTTGGTGAAACAGAAAGAGAAAA 57.166 33.333 0.00 0.00 41.61 2.29
7207 8291 7.410120 AGTTGGTGAAACAGAAAGAGAAAAT 57.590 32.000 0.00 0.00 41.61 1.82
7208 8292 7.484140 AGTTGGTGAAACAGAAAGAGAAAATC 58.516 34.615 0.00 0.00 41.61 2.17
7209 8293 6.391227 TGGTGAAACAGAAAGAGAAAATCC 57.609 37.500 0.00 0.00 39.98 3.01
7210 8294 5.890985 TGGTGAAACAGAAAGAGAAAATCCA 59.109 36.000 0.00 0.00 39.98 3.41
7211 8295 6.379703 TGGTGAAACAGAAAGAGAAAATCCAA 59.620 34.615 0.00 0.00 39.98 3.53
7212 8296 6.697455 GGTGAAACAGAAAGAGAAAATCCAAC 59.303 38.462 0.00 0.00 39.98 3.77
7213 8297 7.257722 GTGAAACAGAAAGAGAAAATCCAACA 58.742 34.615 0.00 0.00 36.32 3.33
7214 8298 7.220875 GTGAAACAGAAAGAGAAAATCCAACAC 59.779 37.037 0.00 0.00 36.32 3.32
7215 8299 7.122650 TGAAACAGAAAGAGAAAATCCAACACT 59.877 33.333 0.00 0.00 0.00 3.55
7216 8300 8.519799 AAACAGAAAGAGAAAATCCAACACTA 57.480 30.769 0.00 0.00 0.00 2.74
7217 8301 7.497925 ACAGAAAGAGAAAATCCAACACTAC 57.502 36.000 0.00 0.00 0.00 2.73
7218 8302 7.054124 ACAGAAAGAGAAAATCCAACACTACA 58.946 34.615 0.00 0.00 0.00 2.74
7219 8303 7.721399 ACAGAAAGAGAAAATCCAACACTACAT 59.279 33.333 0.00 0.00 0.00 2.29
7220 8304 8.233190 CAGAAAGAGAAAATCCAACACTACATC 58.767 37.037 0.00 0.00 0.00 3.06
7221 8305 7.939039 AGAAAGAGAAAATCCAACACTACATCA 59.061 33.333 0.00 0.00 0.00 3.07
7222 8306 7.440523 AAGAGAAAATCCAACACTACATCAC 57.559 36.000 0.00 0.00 0.00 3.06
7223 8307 6.533730 AGAGAAAATCCAACACTACATCACA 58.466 36.000 0.00 0.00 0.00 3.58
7224 8308 6.652481 AGAGAAAATCCAACACTACATCACAG 59.348 38.462 0.00 0.00 0.00 3.66
7225 8309 6.299141 AGAAAATCCAACACTACATCACAGT 58.701 36.000 0.00 0.00 0.00 3.55
7226 8310 6.428159 AGAAAATCCAACACTACATCACAGTC 59.572 38.462 0.00 0.00 0.00 3.51
7227 8311 4.890158 ATCCAACACTACATCACAGTCA 57.110 40.909 0.00 0.00 0.00 3.41
7228 8312 3.990092 TCCAACACTACATCACAGTCAC 58.010 45.455 0.00 0.00 0.00 3.67
7229 8313 3.067106 CCAACACTACATCACAGTCACC 58.933 50.000 0.00 0.00 0.00 4.02
7230 8314 3.067106 CAACACTACATCACAGTCACCC 58.933 50.000 0.00 0.00 0.00 4.61
7231 8315 1.623811 ACACTACATCACAGTCACCCC 59.376 52.381 0.00 0.00 0.00 4.95
7232 8316 1.623311 CACTACATCACAGTCACCCCA 59.377 52.381 0.00 0.00 0.00 4.96
7233 8317 2.237143 CACTACATCACAGTCACCCCAT 59.763 50.000 0.00 0.00 0.00 4.00
7234 8318 3.450817 CACTACATCACAGTCACCCCATA 59.549 47.826 0.00 0.00 0.00 2.74
7235 8319 4.101585 CACTACATCACAGTCACCCCATAT 59.898 45.833 0.00 0.00 0.00 1.78
7236 8320 3.845781 ACATCACAGTCACCCCATATC 57.154 47.619 0.00 0.00 0.00 1.63
7237 8321 3.114606 ACATCACAGTCACCCCATATCA 58.885 45.455 0.00 0.00 0.00 2.15
7238 8322 3.718434 ACATCACAGTCACCCCATATCAT 59.282 43.478 0.00 0.00 0.00 2.45
7239 8323 3.843893 TCACAGTCACCCCATATCATG 57.156 47.619 0.00 0.00 0.00 3.07
7251 8335 4.778534 CCATATCATGGCTTCATCAACC 57.221 45.455 0.00 0.00 44.70 3.77
7252 8336 4.146564 CCATATCATGGCTTCATCAACCA 58.853 43.478 0.00 0.00 44.70 3.67
7253 8337 4.022589 CCATATCATGGCTTCATCAACCAC 60.023 45.833 0.00 0.00 44.70 4.16
7254 8338 2.583024 TCATGGCTTCATCAACCACA 57.417 45.000 0.00 0.00 35.99 4.17
7255 8339 3.090210 TCATGGCTTCATCAACCACAT 57.910 42.857 0.00 0.00 35.99 3.21
7256 8340 3.018856 TCATGGCTTCATCAACCACATC 58.981 45.455 0.00 0.00 35.99 3.06
7257 8341 2.885135 TGGCTTCATCAACCACATCT 57.115 45.000 0.00 0.00 0.00 2.90
7258 8342 3.998913 TGGCTTCATCAACCACATCTA 57.001 42.857 0.00 0.00 0.00 1.98
7259 8343 4.508551 TGGCTTCATCAACCACATCTAT 57.491 40.909 0.00 0.00 0.00 1.98
7260 8344 4.454678 TGGCTTCATCAACCACATCTATC 58.545 43.478 0.00 0.00 0.00 2.08
7261 8345 4.080413 TGGCTTCATCAACCACATCTATCA 60.080 41.667 0.00 0.00 0.00 2.15
7262 8346 4.514441 GGCTTCATCAACCACATCTATCAG 59.486 45.833 0.00 0.00 0.00 2.90
7263 8347 4.024218 GCTTCATCAACCACATCTATCAGC 60.024 45.833 0.00 0.00 0.00 4.26
7264 8348 5.363562 TTCATCAACCACATCTATCAGCT 57.636 39.130 0.00 0.00 0.00 4.24
7265 8349 4.700700 TCATCAACCACATCTATCAGCTG 58.299 43.478 7.63 7.63 0.00 4.24
7266 8350 3.548745 TCAACCACATCTATCAGCTGG 57.451 47.619 15.13 0.00 0.00 4.85
7267 8351 3.106827 TCAACCACATCTATCAGCTGGA 58.893 45.455 15.13 3.44 0.00 3.86
7268 8352 3.118629 TCAACCACATCTATCAGCTGGAC 60.119 47.826 15.13 0.00 0.00 4.02
7269 8353 1.410517 ACCACATCTATCAGCTGGACG 59.589 52.381 15.13 0.00 0.00 4.79
7270 8354 1.269988 CCACATCTATCAGCTGGACGG 60.270 57.143 15.13 2.31 0.00 4.79
7271 8355 0.390860 ACATCTATCAGCTGGACGGC 59.609 55.000 15.13 0.00 0.00 5.68
7272 8356 0.390492 CATCTATCAGCTGGACGGCA 59.610 55.000 15.13 0.00 34.17 5.69
7273 8357 0.678395 ATCTATCAGCTGGACGGCAG 59.322 55.000 15.13 2.63 34.17 4.85
7274 8358 1.593750 CTATCAGCTGGACGGCAGC 60.594 63.158 15.13 4.72 45.38 5.25
7275 8359 2.985512 CTATCAGCTGGACGGCAGCC 62.986 65.000 15.13 0.00 46.14 4.85
7278 8362 4.039092 AGCTGGACGGCAGCCAAT 62.039 61.111 13.30 0.00 46.14 3.16
7279 8363 3.512516 GCTGGACGGCAGCCAATC 61.513 66.667 13.30 8.27 39.61 2.67
7280 8364 2.046023 CTGGACGGCAGCCAATCA 60.046 61.111 13.30 4.84 34.44 2.57
7281 8365 2.359850 TGGACGGCAGCCAATCAC 60.360 61.111 13.30 3.57 31.13 3.06
7282 8366 2.359850 GGACGGCAGCCAATCACA 60.360 61.111 13.30 0.00 0.00 3.58
7283 8367 1.971167 GGACGGCAGCCAATCACAA 60.971 57.895 13.30 0.00 0.00 3.33
7284 8368 1.210155 GACGGCAGCCAATCACAAC 59.790 57.895 13.30 0.00 0.00 3.32
7285 8369 2.176546 CGGCAGCCAATCACAACG 59.823 61.111 13.30 0.00 0.00 4.10
7286 8370 2.126346 GGCAGCCAATCACAACGC 60.126 61.111 6.55 0.00 0.00 4.84
7287 8371 2.126346 GCAGCCAATCACAACGCC 60.126 61.111 0.00 0.00 0.00 5.68
7288 8372 2.629656 GCAGCCAATCACAACGCCT 61.630 57.895 0.00 0.00 0.00 5.52
7289 8373 1.305219 GCAGCCAATCACAACGCCTA 61.305 55.000 0.00 0.00 0.00 3.93
7290 8374 1.164411 CAGCCAATCACAACGCCTAA 58.836 50.000 0.00 0.00 0.00 2.69
7291 8375 1.135689 CAGCCAATCACAACGCCTAAC 60.136 52.381 0.00 0.00 0.00 2.34
7292 8376 0.878416 GCCAATCACAACGCCTAACA 59.122 50.000 0.00 0.00 0.00 2.41
7293 8377 1.268352 GCCAATCACAACGCCTAACAA 59.732 47.619 0.00 0.00 0.00 2.83
7294 8378 2.287909 GCCAATCACAACGCCTAACAAA 60.288 45.455 0.00 0.00 0.00 2.83
7295 8379 3.564511 CCAATCACAACGCCTAACAAAG 58.435 45.455 0.00 0.00 0.00 2.77
7296 8380 3.252215 CCAATCACAACGCCTAACAAAGA 59.748 43.478 0.00 0.00 0.00 2.52
7297 8381 4.082787 CCAATCACAACGCCTAACAAAGAT 60.083 41.667 0.00 0.00 0.00 2.40
7298 8382 5.123186 CCAATCACAACGCCTAACAAAGATA 59.877 40.000 0.00 0.00 0.00 1.98
7299 8383 6.183360 CCAATCACAACGCCTAACAAAGATAT 60.183 38.462 0.00 0.00 0.00 1.63
7300 8384 6.604735 ATCACAACGCCTAACAAAGATATC 57.395 37.500 0.00 0.00 0.00 1.63
7301 8385 5.483811 TCACAACGCCTAACAAAGATATCA 58.516 37.500 5.32 0.00 0.00 2.15
7302 8386 5.580691 TCACAACGCCTAACAAAGATATCAG 59.419 40.000 5.32 0.00 0.00 2.90
7303 8387 4.876107 ACAACGCCTAACAAAGATATCAGG 59.124 41.667 5.32 2.88 0.00 3.86
7304 8388 4.755266 ACGCCTAACAAAGATATCAGGT 57.245 40.909 5.32 0.00 0.00 4.00
7305 8389 4.442706 ACGCCTAACAAAGATATCAGGTG 58.557 43.478 13.71 13.71 39.14 4.00
7306 8390 4.161565 ACGCCTAACAAAGATATCAGGTGA 59.838 41.667 19.53 2.76 37.18 4.02
7307 8391 5.163301 ACGCCTAACAAAGATATCAGGTGAT 60.163 40.000 19.53 6.67 37.18 3.06
7308 8392 5.406780 CGCCTAACAAAGATATCAGGTGATC 59.593 44.000 10.99 0.00 36.06 2.92
7309 8393 6.291377 GCCTAACAAAGATATCAGGTGATCA 58.709 40.000 5.32 0.00 36.05 2.92
7310 8394 6.203723 GCCTAACAAAGATATCAGGTGATCAC 59.796 42.308 17.91 17.91 36.05 3.06
7311 8395 7.504403 CCTAACAAAGATATCAGGTGATCACT 58.496 38.462 24.50 8.13 36.05 3.41
7312 8396 7.989741 CCTAACAAAGATATCAGGTGATCACTT 59.010 37.037 24.50 15.52 36.05 3.16
7313 8397 7.621428 AACAAAGATATCAGGTGATCACTTG 57.379 36.000 27.29 27.29 39.45 3.16
7319 8403 3.407424 TCAGGTGATCACTTGAACAGG 57.593 47.619 31.63 10.65 43.14 4.00
7320 8404 2.972021 TCAGGTGATCACTTGAACAGGA 59.028 45.455 31.63 13.23 43.14 3.86
7321 8405 3.390967 TCAGGTGATCACTTGAACAGGAA 59.609 43.478 31.63 12.58 43.14 3.36
7322 8406 3.750130 CAGGTGATCACTTGAACAGGAAG 59.250 47.826 28.78 2.22 40.38 3.46
7323 8407 3.648067 AGGTGATCACTTGAACAGGAAGA 59.352 43.478 24.50 0.00 0.00 2.87
7324 8408 4.288105 AGGTGATCACTTGAACAGGAAGAT 59.712 41.667 24.50 0.00 0.00 2.40
7325 8409 4.633565 GGTGATCACTTGAACAGGAAGATC 59.366 45.833 24.50 12.65 0.00 2.75
7326 8410 5.486526 GTGATCACTTGAACAGGAAGATCT 58.513 41.667 18.83 0.00 33.44 2.75
7327 8411 5.936956 GTGATCACTTGAACAGGAAGATCTT 59.063 40.000 18.83 7.95 33.44 2.40
7328 8412 5.936372 TGATCACTTGAACAGGAAGATCTTG 59.064 40.000 14.00 1.46 33.44 3.02
7329 8413 5.296151 TCACTTGAACAGGAAGATCTTGT 57.704 39.130 14.00 2.21 38.40 3.16
7331 8415 6.122277 TCACTTGAACAGGAAGATCTTGTTT 58.878 36.000 14.00 0.00 45.01 2.83
7332 8416 7.279615 TCACTTGAACAGGAAGATCTTGTTTA 58.720 34.615 14.00 5.93 45.01 2.01
7333 8417 7.226720 TCACTTGAACAGGAAGATCTTGTTTAC 59.773 37.037 14.00 2.00 45.01 2.01
7334 8418 7.227512 CACTTGAACAGGAAGATCTTGTTTACT 59.772 37.037 14.00 0.25 45.01 2.24
7335 8419 7.227512 ACTTGAACAGGAAGATCTTGTTTACTG 59.772 37.037 14.00 14.17 45.01 2.74
7336 8420 5.470098 TGAACAGGAAGATCTTGTTTACTGC 59.530 40.000 14.00 0.62 45.01 4.40
7337 8421 4.973168 ACAGGAAGATCTTGTTTACTGCA 58.027 39.130 14.00 0.00 32.42 4.41
7338 8422 5.376625 ACAGGAAGATCTTGTTTACTGCAA 58.623 37.500 14.00 0.00 32.42 4.08
7339 8423 5.471456 ACAGGAAGATCTTGTTTACTGCAAG 59.529 40.000 14.00 0.00 43.26 4.01
7344 8428 3.140325 TCTTGTTTACTGCAAGAGGGG 57.860 47.619 3.92 0.00 44.90 4.79
7345 8429 2.441750 TCTTGTTTACTGCAAGAGGGGT 59.558 45.455 3.92 0.00 44.90 4.95
7346 8430 3.117663 TCTTGTTTACTGCAAGAGGGGTT 60.118 43.478 3.92 0.00 44.90 4.11
7347 8431 2.582052 TGTTTACTGCAAGAGGGGTTG 58.418 47.619 0.00 0.00 37.43 3.77
7355 8439 1.089920 CAAGAGGGGTTGCTGATTCG 58.910 55.000 0.00 0.00 0.00 3.34
7356 8440 0.984230 AAGAGGGGTTGCTGATTCGA 59.016 50.000 0.00 0.00 0.00 3.71
7357 8441 0.250513 AGAGGGGTTGCTGATTCGAC 59.749 55.000 0.00 0.00 0.00 4.20
7358 8442 0.036388 GAGGGGTTGCTGATTCGACA 60.036 55.000 0.00 0.00 0.00 4.35
7359 8443 0.620556 AGGGGTTGCTGATTCGACAT 59.379 50.000 0.00 0.00 0.00 3.06
7360 8444 0.734889 GGGGTTGCTGATTCGACATG 59.265 55.000 0.00 0.00 0.00 3.21
7361 8445 1.453155 GGGTTGCTGATTCGACATGT 58.547 50.000 0.00 0.00 0.00 3.21
7362 8446 2.627945 GGGTTGCTGATTCGACATGTA 58.372 47.619 0.00 0.00 0.00 2.29
7363 8447 3.206150 GGGTTGCTGATTCGACATGTAT 58.794 45.455 0.00 0.00 0.00 2.29
7364 8448 3.002656 GGGTTGCTGATTCGACATGTATG 59.997 47.826 0.00 0.00 0.00 2.39
7365 8449 3.623060 GGTTGCTGATTCGACATGTATGT 59.377 43.478 0.00 0.00 45.16 2.29
7366 8450 4.094887 GGTTGCTGATTCGACATGTATGTT 59.905 41.667 0.00 0.00 41.95 2.71
7367 8451 5.258622 GTTGCTGATTCGACATGTATGTTC 58.741 41.667 0.00 0.00 41.95 3.18
7368 8452 3.871006 TGCTGATTCGACATGTATGTTCC 59.129 43.478 0.00 0.00 41.95 3.62
7369 8453 3.871006 GCTGATTCGACATGTATGTTCCA 59.129 43.478 0.00 0.00 41.95 3.53
7370 8454 4.512944 GCTGATTCGACATGTATGTTCCAT 59.487 41.667 0.00 0.00 41.95 3.41
7371 8455 5.559608 GCTGATTCGACATGTATGTTCCATG 60.560 44.000 0.00 0.00 41.95 3.66
7372 8456 4.273235 TGATTCGACATGTATGTTCCATGC 59.727 41.667 0.00 0.00 42.74 4.06
7373 8457 3.541996 TCGACATGTATGTTCCATGCT 57.458 42.857 0.00 0.00 42.74 3.79
7374 8458 4.664150 TCGACATGTATGTTCCATGCTA 57.336 40.909 0.00 0.00 42.74 3.49
7375 8459 5.017294 TCGACATGTATGTTCCATGCTAA 57.983 39.130 0.00 0.00 42.74 3.09
7376 8460 4.808895 TCGACATGTATGTTCCATGCTAAC 59.191 41.667 0.00 2.99 42.74 2.34
7377 8461 4.811024 CGACATGTATGTTCCATGCTAACT 59.189 41.667 0.00 0.93 42.74 2.24
7378 8462 5.983118 CGACATGTATGTTCCATGCTAACTA 59.017 40.000 0.00 0.00 42.74 2.24
7379 8463 6.478673 CGACATGTATGTTCCATGCTAACTAA 59.521 38.462 0.00 0.00 42.74 2.24
7380 8464 7.306807 CGACATGTATGTTCCATGCTAACTAAG 60.307 40.741 0.00 0.00 42.74 2.18
7381 8465 6.767902 ACATGTATGTTCCATGCTAACTAAGG 59.232 38.462 0.00 0.00 42.74 2.69
7382 8466 5.123227 TGTATGTTCCATGCTAACTAAGGC 58.877 41.667 9.67 0.00 0.00 4.35
7383 8467 3.712016 TGTTCCATGCTAACTAAGGCA 57.288 42.857 9.67 0.00 42.80 4.75
7384 8468 3.609853 TGTTCCATGCTAACTAAGGCAG 58.390 45.455 9.67 0.00 41.88 4.85
7385 8469 2.332063 TCCATGCTAACTAAGGCAGC 57.668 50.000 0.00 0.00 41.88 5.25
7386 8470 1.134098 TCCATGCTAACTAAGGCAGCC 60.134 52.381 1.84 1.84 41.88 4.85
7387 8471 0.940126 CATGCTAACTAAGGCAGCCG 59.060 55.000 5.55 0.00 41.88 5.52
7388 8472 0.830648 ATGCTAACTAAGGCAGCCGA 59.169 50.000 5.55 0.00 41.88 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.211457 CAGTCAATGGAAGGAGGAGGG 59.789 57.143 0.00 0.00 0.00 4.30
9 10 1.912043 ACAGTCAATGGAAGGAGGAGG 59.088 52.381 0.00 0.00 0.00 4.30
22 23 3.295093 TGAAAAGGGCATTGACAGTCAA 58.705 40.909 18.42 18.42 41.09 3.18
24 25 3.760684 AGATGAAAAGGGCATTGACAGTC 59.239 43.478 0.00 0.00 0.00 3.51
25 26 3.760684 GAGATGAAAAGGGCATTGACAGT 59.239 43.478 0.00 0.00 0.00 3.55
26 27 3.129988 GGAGATGAAAAGGGCATTGACAG 59.870 47.826 0.00 0.00 0.00 3.51
27 28 3.091545 GGAGATGAAAAGGGCATTGACA 58.908 45.455 0.00 0.00 0.00 3.58
28 29 3.091545 TGGAGATGAAAAGGGCATTGAC 58.908 45.455 0.00 0.00 0.00 3.18
29 30 3.091545 GTGGAGATGAAAAGGGCATTGA 58.908 45.455 0.00 0.00 0.00 2.57
30 31 2.167075 GGTGGAGATGAAAAGGGCATTG 59.833 50.000 0.00 0.00 0.00 2.82
31 32 2.225343 TGGTGGAGATGAAAAGGGCATT 60.225 45.455 0.00 0.00 0.00 3.56
32 33 1.358787 TGGTGGAGATGAAAAGGGCAT 59.641 47.619 0.00 0.00 0.00 4.40
33 34 0.776810 TGGTGGAGATGAAAAGGGCA 59.223 50.000 0.00 0.00 0.00 5.36
34 35 2.149973 ATGGTGGAGATGAAAAGGGC 57.850 50.000 0.00 0.00 0.00 5.19
35 36 2.167075 GCAATGGTGGAGATGAAAAGGG 59.833 50.000 0.00 0.00 0.00 3.95
36 37 2.827322 TGCAATGGTGGAGATGAAAAGG 59.173 45.455 0.00 0.00 0.00 3.11
56 59 6.150976 TGGTGCATACAAGGAAGAGTTTATTG 59.849 38.462 0.00 0.00 0.00 1.90
78 81 4.098807 GTCAAGTAAAATGGTGGTGTTGGT 59.901 41.667 0.00 0.00 0.00 3.67
79 82 4.340950 AGTCAAGTAAAATGGTGGTGTTGG 59.659 41.667 0.00 0.00 0.00 3.77
93 96 8.736244 GGGAAATATGTAAAGCAAGTCAAGTAA 58.264 33.333 0.00 0.00 0.00 2.24
95 98 6.948309 AGGGAAATATGTAAAGCAAGTCAAGT 59.052 34.615 0.00 0.00 0.00 3.16
109 112 4.788925 TTCGGAATGGAGGGAAATATGT 57.211 40.909 0.00 0.00 0.00 2.29
121 124 6.267496 AGGAAAACAGTATTTTCGGAATGG 57.733 37.500 0.72 0.00 38.82 3.16
207 210 8.528643 TGTGTGTATGCTTTGAGTAGTACTAAT 58.471 33.333 3.61 2.68 0.00 1.73
208 211 7.811236 GTGTGTGTATGCTTTGAGTAGTACTAA 59.189 37.037 3.61 0.00 0.00 2.24
215 218 3.326588 AGGGTGTGTGTATGCTTTGAGTA 59.673 43.478 0.00 0.00 0.00 2.59
244 247 8.748380 AAGCTATAGTTACGACGTAAAGTTTT 57.252 30.769 21.24 11.01 29.42 2.43
252 255 7.226325 ACATCTCTTAAGCTATAGTTACGACGT 59.774 37.037 5.52 5.52 0.00 4.34
327 352 9.070149 GCAAGTCATTTTTATCAGTTCATCTTC 57.930 33.333 0.00 0.00 0.00 2.87
336 361 4.966366 GCGCTAGCAAGTCATTTTTATCAG 59.034 41.667 16.45 0.00 44.35 2.90
353 378 6.830114 AAGTAAATACTAAAGCAGCGCTAG 57.170 37.500 10.99 6.00 34.57 3.42
355 380 6.761714 ACATAAGTAAATACTAAAGCAGCGCT 59.238 34.615 2.64 2.64 36.44 5.92
356 381 6.846283 CACATAAGTAAATACTAAAGCAGCGC 59.154 38.462 0.00 0.00 34.99 5.92
370 565 7.445096 CACATCATATGAGCCCACATAAGTAAA 59.555 37.037 11.78 0.00 36.53 2.01
377 572 3.483421 CACACATCATATGAGCCCACAT 58.517 45.455 11.78 0.00 0.00 3.21
447 1038 3.683340 GTCGTTGAACTCCCAAATAGACC 59.317 47.826 0.00 0.00 0.00 3.85
448 1039 4.312443 TGTCGTTGAACTCCCAAATAGAC 58.688 43.478 0.00 0.00 32.71 2.59
455 1046 2.920724 TCATTGTCGTTGAACTCCCA 57.079 45.000 0.00 0.00 0.00 4.37
456 1047 3.670627 GCAATCATTGTCGTTGAACTCCC 60.671 47.826 0.00 0.00 0.00 4.30
459 1050 2.095768 CCGCAATCATTGTCGTTGAACT 60.096 45.455 11.55 0.00 0.00 3.01
472 1063 2.751436 GCCCTGAAGCCGCAATCA 60.751 61.111 0.00 0.00 0.00 2.57
483 1074 2.284331 TAAGGACCAGCGCCCTGA 60.284 61.111 2.29 0.00 41.77 3.86
502 1093 2.094762 AAGTCTTCATGCACGTACCC 57.905 50.000 0.00 0.00 0.00 3.69
505 1096 3.325870 CCAGAAAGTCTTCATGCACGTA 58.674 45.455 0.00 0.00 33.64 3.57
513 1104 3.668447 GATGACAGCCAGAAAGTCTTCA 58.332 45.455 0.00 0.00 36.80 3.02
518 1109 1.344438 TGTCGATGACAGCCAGAAAGT 59.656 47.619 0.00 0.00 37.67 2.66
522 1113 0.247460 CCTTGTCGATGACAGCCAGA 59.753 55.000 0.00 0.00 43.69 3.86
524 1115 0.037326 GACCTTGTCGATGACAGCCA 60.037 55.000 0.00 0.00 43.69 4.75
547 1138 1.831286 GTTCCCCTATCGGAGGCGA 60.831 63.158 0.00 0.00 45.17 5.54
550 1141 0.104304 CGTTGTTCCCCTATCGGAGG 59.896 60.000 0.00 0.00 46.25 4.30
554 1145 1.922570 CTGTCGTTGTTCCCCTATCG 58.077 55.000 0.00 0.00 0.00 2.92
556 1147 0.981183 TGCTGTCGTTGTTCCCCTAT 59.019 50.000 0.00 0.00 0.00 2.57
557 1148 0.320374 CTGCTGTCGTTGTTCCCCTA 59.680 55.000 0.00 0.00 0.00 3.53
575 1166 0.860618 GAATAAGTCGTCGACGCGCT 60.861 55.000 32.19 26.71 37.67 5.92
576 1167 0.860618 AGAATAAGTCGTCGACGCGC 60.861 55.000 32.19 25.05 37.67 6.86
580 1171 2.438583 CCGTCAGAATAAGTCGTCGAC 58.561 52.381 17.70 17.70 0.00 4.20
587 1178 2.097825 ACTACCGCCGTCAGAATAAGT 58.902 47.619 0.00 0.00 0.00 2.24
590 1181 0.742505 CCACTACCGCCGTCAGAATA 59.257 55.000 0.00 0.00 0.00 1.75
591 1182 1.255667 ACCACTACCGCCGTCAGAAT 61.256 55.000 0.00 0.00 0.00 2.40
604 1195 2.440409 GAGACCACCGAACTACCACTA 58.560 52.381 0.00 0.00 0.00 2.74
606 1197 0.109412 CGAGACCACCGAACTACCAC 60.109 60.000 0.00 0.00 0.00 4.16
611 1202 0.531200 GATTCCGAGACCACCGAACT 59.469 55.000 0.00 0.00 0.00 3.01
650 1241 3.303791 GGAAGTACAAAGCACCTCAAACG 60.304 47.826 0.00 0.00 0.00 3.60
749 1345 4.299316 GCCGCGCGCTAATCTTGG 62.299 66.667 30.48 21.37 0.00 3.61
785 1381 2.527123 TGTAGGGCCCACACGGAA 60.527 61.111 27.56 2.55 0.00 4.30
987 1583 1.326213 ACTCCATGGAGGACAGAGCG 61.326 60.000 38.54 16.99 45.88 5.03
988 1584 0.177604 CACTCCATGGAGGACAGAGC 59.822 60.000 38.54 0.00 45.88 4.09
990 1586 1.607801 CGCACTCCATGGAGGACAGA 61.608 60.000 38.54 6.79 45.88 3.41
1020 1618 2.906458 CGCCCCAGATCAAGAGCT 59.094 61.111 0.00 0.00 0.00 4.09
1103 1701 6.750775 AAAAAGAACAAAACAAACGAACGA 57.249 29.167 0.14 0.00 0.00 3.85
1104 1702 9.179211 GATTAAAAAGAACAAAACAAACGAACG 57.821 29.630 0.00 0.00 0.00 3.95
1188 1803 0.460722 AACAAAAACCGAAACCCCCG 59.539 50.000 0.00 0.00 0.00 5.73
1282 1903 1.198637 GTGTTACTCTACGGTCGCACT 59.801 52.381 0.00 0.00 0.00 4.40
1314 1935 2.687425 TGTAGCAAGTGCACACATGTTT 59.313 40.909 21.04 9.88 45.16 2.83
1348 1975 0.460987 GCCACAAGATCCTCACTCCG 60.461 60.000 0.00 0.00 0.00 4.63
1391 2018 1.374947 CGGGTTTCAGGAGCTCCAA 59.625 57.895 33.90 18.15 38.89 3.53
1408 2035 6.808212 AGAAATGAAAAACTGCATCCATTACG 59.192 34.615 0.00 0.00 0.00 3.18
1413 2040 5.787953 TCAGAAATGAAAAACTGCATCCA 57.212 34.783 0.00 0.00 0.00 3.41
1417 2044 5.984926 GGATGTTCAGAAATGAAAAACTGCA 59.015 36.000 0.00 0.00 0.00 4.41
1456 2084 7.807977 ATTTTACTCCAGCATATGTCGAAAT 57.192 32.000 4.29 0.00 0.00 2.17
1489 2117 9.965824 CTAACAAGACATTTTGATTTTGGTACT 57.034 29.630 0.00 0.00 0.00 2.73
1490 2118 9.959749 TCTAACAAGACATTTTGATTTTGGTAC 57.040 29.630 0.00 0.00 0.00 3.34
1492 2120 8.143835 CCTCTAACAAGACATTTTGATTTTGGT 58.856 33.333 0.00 0.00 0.00 3.67
1504 2139 3.162666 TCCGTCACCTCTAACAAGACAT 58.837 45.455 0.00 0.00 0.00 3.06
1511 2146 2.744202 TCTACGTTCCGTCACCTCTAAC 59.256 50.000 0.00 0.00 41.54 2.34
1574 2235 6.072286 AGGACAGTGCATACTTTCAGAATTTG 60.072 38.462 0.00 0.00 35.73 2.32
1575 2236 6.006449 AGGACAGTGCATACTTTCAGAATTT 58.994 36.000 0.00 0.00 35.73 1.82
1586 2247 2.363788 TTCGACAGGACAGTGCATAC 57.636 50.000 0.00 0.00 0.00 2.39
1610 2271 9.778993 CCTAAACTCATGAAATTATGTGTTCTG 57.221 33.333 8.39 5.76 41.33 3.02
1614 2275 9.167311 GTCTCCTAAACTCATGAAATTATGTGT 57.833 33.333 0.00 0.00 36.61 3.72
1622 2283 7.148188 GCAATCATGTCTCCTAAACTCATGAAA 60.148 37.037 9.57 0.00 44.69 2.69
1636 2297 7.658982 TCAAATATACCTCAGCAATCATGTCTC 59.341 37.037 0.00 0.00 0.00 3.36
1669 2330 8.470002 AGGTTTCTTTAAGCAATATCAATCACC 58.530 33.333 0.00 0.00 36.70 4.02
1676 2337 6.856895 ACAGCAGGTTTCTTTAAGCAATATC 58.143 36.000 0.00 0.00 36.70 1.63
1693 2354 5.078411 ACAAACTATCTACTGACAGCAGG 57.922 43.478 1.25 0.00 46.60 4.85
1788 2449 7.425606 GGAAATGTCATGTGAGTGTAAACTTT 58.574 34.615 0.00 0.00 0.00 2.66
1857 2519 2.484264 GTCAATGGTAGCACAGTCAACC 59.516 50.000 0.00 0.00 0.00 3.77
2020 2682 3.751175 TGGTGCTGATGTTTAAGTACTGC 59.249 43.478 0.00 0.00 30.66 4.40
2131 2793 6.375455 CCAAGATTTAGTAACAGCACTCCAAT 59.625 38.462 0.00 0.00 0.00 3.16
2332 2994 9.003658 AGTTAATCTCTACCAGTGAAACAAATG 57.996 33.333 0.00 0.00 41.43 2.32
2493 3155 6.462552 TGGTCTACTCAATCTCTTCAGATG 57.537 41.667 0.00 0.00 38.55 2.90
2631 3297 5.007430 GCCAGAGATAACATGACTTGTGATG 59.993 44.000 0.00 0.00 38.99 3.07
2992 3661 9.443283 GAAAAGCTGCTAAATCACAACTATATG 57.557 33.333 0.90 0.00 0.00 1.78
3017 3686 4.761975 ACAGAGTTTAACGAGTTTGTGGA 58.238 39.130 0.00 0.00 0.00 4.02
3334 4003 9.216117 AGTATATGAATTAATTACCACGGAAGC 57.784 33.333 0.00 0.00 0.00 3.86
3458 4131 4.211164 TGTTGCAAGATAGTCAAGAACGTG 59.789 41.667 0.00 0.00 0.00 4.49
3769 4442 4.340381 GCAAAGTATTGATCTTCCCTGCAT 59.660 41.667 0.00 0.00 38.94 3.96
4055 4729 2.179427 GCAGGGGCCTGTAAAAATTCT 58.821 47.619 0.84 0.00 45.24 2.40
4295 4970 1.831652 CGAGTGGGGGCACTTTCTCT 61.832 60.000 0.00 0.00 35.23 3.10
4302 4977 0.252197 AATTACTCGAGTGGGGGCAC 59.748 55.000 28.12 0.00 0.00 5.01
4367 5042 6.350445 CCATTTCCACCCAATTCAGTTAGAAG 60.350 42.308 0.00 0.00 40.15 2.85
4389 5064 8.418597 TCAGTTAGAAGTAGTTGAAGTACCAT 57.581 34.615 6.56 0.00 0.00 3.55
4443 5118 7.331934 TCAATCTGCATTCTGTAGTACAAACTC 59.668 37.037 4.21 0.00 37.15 3.01
4455 5130 4.093115 GTGACTGAGTCAATCTGCATTCTG 59.907 45.833 18.01 0.00 44.49 3.02
4467 5142 3.421844 TGCTAAGCTAGTGACTGAGTCA 58.578 45.455 11.93 11.93 40.50 3.41
4614 5290 7.369803 ACAACATCTGCTAAGAATGTTACAG 57.630 36.000 0.00 0.00 34.85 2.74
4680 5356 9.668497 ACCAGAAGAATAACTTTTGTAGGTATC 57.332 33.333 0.00 0.00 35.66 2.24
4775 5451 9.466497 ACATTATTCACACTCAAAAGTCCATAT 57.534 29.630 0.00 0.00 31.71 1.78
5252 5929 7.762382 AGCATTCGGTAAAGAAAAAGGATAAG 58.238 34.615 0.00 0.00 33.43 1.73
5255 5932 5.125578 GGAGCATTCGGTAAAGAAAAAGGAT 59.874 40.000 0.00 0.00 33.43 3.24
5262 5939 2.039216 TGTGGGAGCATTCGGTAAAGAA 59.961 45.455 0.00 0.00 34.31 2.52
5529 6207 2.028130 TGCACTTGAAATTGGTTCCGT 58.972 42.857 0.00 0.00 35.12 4.69
5671 6349 2.445427 TGCAAACAGGTACATGATGGG 58.555 47.619 15.54 0.00 0.00 4.00
5841 6519 6.040278 TGCAAGACAATGATGTACTTTGGAAA 59.960 34.615 0.00 0.00 40.74 3.13
5842 6520 5.534278 TGCAAGACAATGATGTACTTTGGAA 59.466 36.000 0.00 0.00 40.74 3.53
5954 6632 3.243535 CCAGTGTCTCAATATGCTCGCTA 60.244 47.826 0.00 0.00 0.00 4.26
6080 6758 0.733909 CTTCGACGACAGCATCAGCA 60.734 55.000 0.00 0.00 45.49 4.41
6107 6785 1.067084 CGTCATCGCAGAGGCAGAT 59.933 57.895 0.00 0.00 43.63 2.90
6116 6794 0.389817 CCTTTCTGGTCGTCATCGCA 60.390 55.000 0.00 0.00 36.96 5.10
6161 6839 5.628797 TCTTGGTCAGGTAATGCATCATA 57.371 39.130 0.00 0.00 0.00 2.15
6251 6929 7.928307 AAAATAAGCAGCTCAATGAAGAGTA 57.072 32.000 0.00 0.00 37.94 2.59
6323 7001 6.546403 TCTCGCCCAGATATTATCCTGTATAC 59.454 42.308 0.00 0.00 0.00 1.47
6330 7067 5.407407 TCTTTCTCGCCCAGATATTATCC 57.593 43.478 0.00 0.00 0.00 2.59
6337 7074 1.909302 TCCTTTCTTTCTCGCCCAGAT 59.091 47.619 0.00 0.00 0.00 2.90
6357 7094 7.196331 GCAAGACATAAGTGAAACAAACTCTT 58.804 34.615 0.00 0.00 41.43 2.85
6399 7222 0.981183 ACTCCTTCATACAACGGGCA 59.019 50.000 0.00 0.00 0.00 5.36
6400 7223 1.066430 TGACTCCTTCATACAACGGGC 60.066 52.381 0.00 0.00 0.00 6.13
6472 7391 3.619929 GGTAAACGATGTGACCATGTACC 59.380 47.826 0.00 0.00 31.89 3.34
6491 7410 7.783090 TTAAACAAAACTGACGTACATGGTA 57.217 32.000 0.00 0.00 0.00 3.25
6500 7419 6.195613 TCGCAAAAGATTAAACAAAACTGACG 59.804 34.615 0.00 0.00 0.00 4.35
6503 7483 7.010091 AGGTTCGCAAAAGATTAAACAAAACTG 59.990 33.333 0.00 0.00 0.00 3.16
6588 7570 2.435372 TGGTGCTCAACAAAAGACCT 57.565 45.000 0.00 0.00 0.00 3.85
6590 7572 4.202050 ACAGATTGGTGCTCAACAAAAGAC 60.202 41.667 4.31 0.00 41.89 3.01
6591 7573 3.953612 ACAGATTGGTGCTCAACAAAAGA 59.046 39.130 4.31 0.00 41.89 2.52
6592 7574 4.311816 ACAGATTGGTGCTCAACAAAAG 57.688 40.909 4.31 0.97 41.89 2.27
6593 7575 5.843673 TTACAGATTGGTGCTCAACAAAA 57.156 34.783 4.31 0.00 41.89 2.44
6594 7576 5.534278 TGATTACAGATTGGTGCTCAACAAA 59.466 36.000 4.31 0.00 41.89 2.83
6633 7684 8.598916 TCCATAAGTGTCATGGTTTTAGTTAGA 58.401 33.333 0.00 0.00 43.03 2.10
6756 7808 3.733024 TTGACGTTTCACAATATCGGC 57.267 42.857 0.00 0.00 0.00 5.54
6847 7907 2.924290 GCTTCCATCTGACGTGAACTAC 59.076 50.000 0.00 0.00 0.00 2.73
6952 8036 7.596248 GCATGGATCGTTATGCTTTCAATTAAT 59.404 33.333 16.40 0.00 44.70 1.40
7076 8160 9.350357 CGTTGAGCAATTATATACGTACCTAAT 57.650 33.333 0.00 1.58 0.00 1.73
7077 8161 7.809331 CCGTTGAGCAATTATATACGTACCTAA 59.191 37.037 0.00 0.00 0.00 2.69
7078 8162 7.307694 CCGTTGAGCAATTATATACGTACCTA 58.692 38.462 0.00 0.00 0.00 3.08
7079 8163 6.154445 CCGTTGAGCAATTATATACGTACCT 58.846 40.000 0.00 0.00 0.00 3.08
7080 8164 5.346822 CCCGTTGAGCAATTATATACGTACC 59.653 44.000 0.00 0.00 0.00 3.34
7081 8165 6.151691 TCCCGTTGAGCAATTATATACGTAC 58.848 40.000 0.00 0.00 0.00 3.67
7082 8166 6.330004 TCCCGTTGAGCAATTATATACGTA 57.670 37.500 0.00 0.00 0.00 3.57
7083 8167 5.204409 TCCCGTTGAGCAATTATATACGT 57.796 39.130 0.00 0.00 0.00 3.57
7084 8168 6.533819 TTTCCCGTTGAGCAATTATATACG 57.466 37.500 0.00 0.00 0.00 3.06
7085 8169 7.803189 CACATTTCCCGTTGAGCAATTATATAC 59.197 37.037 0.00 0.00 0.00 1.47
7086 8170 7.717436 TCACATTTCCCGTTGAGCAATTATATA 59.283 33.333 0.00 0.00 0.00 0.86
7087 8171 6.545666 TCACATTTCCCGTTGAGCAATTATAT 59.454 34.615 0.00 0.00 0.00 0.86
7088 8172 5.883115 TCACATTTCCCGTTGAGCAATTATA 59.117 36.000 0.00 0.00 0.00 0.98
7089 8173 4.704540 TCACATTTCCCGTTGAGCAATTAT 59.295 37.500 0.00 0.00 0.00 1.28
7090 8174 4.075682 TCACATTTCCCGTTGAGCAATTA 58.924 39.130 0.00 0.00 0.00 1.40
7091 8175 2.890311 TCACATTTCCCGTTGAGCAATT 59.110 40.909 0.00 0.00 0.00 2.32
7092 8176 2.513753 TCACATTTCCCGTTGAGCAAT 58.486 42.857 0.00 0.00 0.00 3.56
7093 8177 1.974265 TCACATTTCCCGTTGAGCAA 58.026 45.000 0.00 0.00 0.00 3.91
7094 8178 1.974265 TTCACATTTCCCGTTGAGCA 58.026 45.000 0.00 0.00 0.00 4.26
7095 8179 2.487762 TCATTCACATTTCCCGTTGAGC 59.512 45.455 0.00 0.00 0.00 4.26
7096 8180 3.501828 TGTCATTCACATTTCCCGTTGAG 59.498 43.478 0.00 0.00 0.00 3.02
7097 8181 3.481453 TGTCATTCACATTTCCCGTTGA 58.519 40.909 0.00 0.00 0.00 3.18
7098 8182 3.913548 TGTCATTCACATTTCCCGTTG 57.086 42.857 0.00 0.00 0.00 4.10
7099 8183 5.467035 AATTGTCATTCACATTTCCCGTT 57.533 34.783 0.00 0.00 33.90 4.44
7100 8184 5.010516 TGAAATTGTCATTCACATTTCCCGT 59.989 36.000 5.04 0.00 35.40 5.28
7101 8185 5.468592 TGAAATTGTCATTCACATTTCCCG 58.531 37.500 5.04 0.00 35.40 5.14
7114 8198 4.458989 GCTGTCCCTGTAATGAAATTGTCA 59.541 41.667 0.00 0.00 36.99 3.58
7115 8199 4.142381 GGCTGTCCCTGTAATGAAATTGTC 60.142 45.833 0.00 0.00 36.99 3.18
7116 8200 3.763897 GGCTGTCCCTGTAATGAAATTGT 59.236 43.478 0.00 0.00 36.99 2.71
7117 8201 3.181497 CGGCTGTCCCTGTAATGAAATTG 60.181 47.826 0.00 0.00 36.99 2.32
7118 8202 3.016736 CGGCTGTCCCTGTAATGAAATT 58.983 45.455 0.00 0.00 41.28 1.82
7119 8203 2.026262 ACGGCTGTCCCTGTAATGAAAT 60.026 45.455 0.00 0.00 0.00 2.17
7120 8204 1.349688 ACGGCTGTCCCTGTAATGAAA 59.650 47.619 0.00 0.00 0.00 2.69
7121 8205 0.981183 ACGGCTGTCCCTGTAATGAA 59.019 50.000 0.00 0.00 0.00 2.57
7122 8206 1.855295 TACGGCTGTCCCTGTAATGA 58.145 50.000 0.00 0.00 0.00 2.57
7123 8207 2.550978 CTTACGGCTGTCCCTGTAATG 58.449 52.381 0.00 0.00 34.47 1.90
7124 8208 1.134491 GCTTACGGCTGTCCCTGTAAT 60.134 52.381 0.00 0.00 34.47 1.89
7125 8209 0.248289 GCTTACGGCTGTCCCTGTAA 59.752 55.000 0.00 0.00 38.06 2.41
7126 8210 0.901114 TGCTTACGGCTGTCCCTGTA 60.901 55.000 0.00 0.00 42.39 2.74
7127 8211 1.553690 ATGCTTACGGCTGTCCCTGT 61.554 55.000 0.00 0.00 42.39 4.00
7128 8212 0.811616 GATGCTTACGGCTGTCCCTG 60.812 60.000 0.00 0.00 42.39 4.45
7129 8213 1.264749 TGATGCTTACGGCTGTCCCT 61.265 55.000 0.00 0.00 42.39 4.20
7130 8214 1.090052 GTGATGCTTACGGCTGTCCC 61.090 60.000 0.00 0.00 42.39 4.46
7131 8215 0.108138 AGTGATGCTTACGGCTGTCC 60.108 55.000 0.00 0.00 42.39 4.02
7132 8216 1.394917 CAAGTGATGCTTACGGCTGTC 59.605 52.381 0.00 0.00 42.39 3.51
7133 8217 1.442769 CAAGTGATGCTTACGGCTGT 58.557 50.000 2.42 2.42 42.39 4.40
7144 8228 3.934579 TGTGTATGTGCTAGCAAGTGATG 59.065 43.478 21.29 0.00 0.00 3.07
7145 8229 4.186926 CTGTGTATGTGCTAGCAAGTGAT 58.813 43.478 21.29 11.52 0.00 3.06
7146 8230 3.588955 CTGTGTATGTGCTAGCAAGTGA 58.411 45.455 21.29 4.11 0.00 3.41
7147 8231 2.094894 GCTGTGTATGTGCTAGCAAGTG 59.905 50.000 21.29 5.29 34.64 3.16
7148 8232 2.350522 GCTGTGTATGTGCTAGCAAGT 58.649 47.619 21.29 13.53 34.64 3.16
7149 8233 1.667724 GGCTGTGTATGTGCTAGCAAG 59.332 52.381 21.29 12.48 36.15 4.01
7150 8234 1.278985 AGGCTGTGTATGTGCTAGCAA 59.721 47.619 21.29 10.49 36.15 3.91
7151 8235 0.904649 AGGCTGTGTATGTGCTAGCA 59.095 50.000 14.93 14.93 36.15 3.49
7152 8236 2.029838 AAGGCTGTGTATGTGCTAGC 57.970 50.000 8.10 8.10 0.00 3.42
7153 8237 3.866651 AGAAAGGCTGTGTATGTGCTAG 58.133 45.455 0.00 0.00 0.00 3.42
7154 8238 3.515502 AGAGAAAGGCTGTGTATGTGCTA 59.484 43.478 0.00 0.00 0.00 3.49
7155 8239 2.304180 AGAGAAAGGCTGTGTATGTGCT 59.696 45.455 0.00 0.00 0.00 4.40
7156 8240 2.704572 AGAGAAAGGCTGTGTATGTGC 58.295 47.619 0.00 0.00 0.00 4.57
7157 8241 5.330455 TCTAGAGAAAGGCTGTGTATGTG 57.670 43.478 0.00 0.00 0.00 3.21
7158 8242 6.552445 ATTCTAGAGAAAGGCTGTGTATGT 57.448 37.500 0.00 0.00 37.61 2.29
7159 8243 8.200792 ACTAATTCTAGAGAAAGGCTGTGTATG 58.799 37.037 0.00 0.00 37.61 2.39
7160 8244 8.312669 ACTAATTCTAGAGAAAGGCTGTGTAT 57.687 34.615 0.00 0.00 37.61 2.29
7161 8245 7.719871 ACTAATTCTAGAGAAAGGCTGTGTA 57.280 36.000 0.00 0.00 37.61 2.90
7162 8246 6.613153 ACTAATTCTAGAGAAAGGCTGTGT 57.387 37.500 0.00 0.00 37.61 3.72
7163 8247 6.314896 CCAACTAATTCTAGAGAAAGGCTGTG 59.685 42.308 0.00 0.00 37.61 3.66
7164 8248 6.013293 ACCAACTAATTCTAGAGAAAGGCTGT 60.013 38.462 0.00 0.00 37.61 4.40
7165 8249 6.314896 CACCAACTAATTCTAGAGAAAGGCTG 59.685 42.308 0.00 0.00 37.61 4.85
7166 8250 6.213600 TCACCAACTAATTCTAGAGAAAGGCT 59.786 38.462 0.00 0.00 37.61 4.58
7167 8251 6.407202 TCACCAACTAATTCTAGAGAAAGGC 58.593 40.000 0.00 0.00 37.61 4.35
7168 8252 8.722394 GTTTCACCAACTAATTCTAGAGAAAGG 58.278 37.037 0.00 0.00 33.40 3.11
7169 8253 9.273016 TGTTTCACCAACTAATTCTAGAGAAAG 57.727 33.333 0.00 0.00 35.52 2.62
7170 8254 9.273016 CTGTTTCACCAACTAATTCTAGAGAAA 57.727 33.333 0.00 0.00 35.52 2.52
7171 8255 8.647796 TCTGTTTCACCAACTAATTCTAGAGAA 58.352 33.333 0.00 0.00 36.21 2.87
7172 8256 8.190326 TCTGTTTCACCAACTAATTCTAGAGA 57.810 34.615 0.00 0.00 36.21 3.10
7173 8257 8.833231 TTCTGTTTCACCAACTAATTCTAGAG 57.167 34.615 0.00 0.00 36.21 2.43
7174 8258 9.273016 CTTTCTGTTTCACCAACTAATTCTAGA 57.727 33.333 0.00 0.00 36.21 2.43
7175 8259 9.273016 TCTTTCTGTTTCACCAACTAATTCTAG 57.727 33.333 0.00 0.00 36.21 2.43
7176 8260 9.273016 CTCTTTCTGTTTCACCAACTAATTCTA 57.727 33.333 0.00 0.00 36.21 2.10
7177 8261 7.993183 TCTCTTTCTGTTTCACCAACTAATTCT 59.007 33.333 0.00 0.00 36.21 2.40
7178 8262 8.154649 TCTCTTTCTGTTTCACCAACTAATTC 57.845 34.615 0.00 0.00 36.21 2.17
7179 8263 8.519799 TTCTCTTTCTGTTTCACCAACTAATT 57.480 30.769 0.00 0.00 36.21 1.40
7180 8264 8.519799 TTTCTCTTTCTGTTTCACCAACTAAT 57.480 30.769 0.00 0.00 36.21 1.73
7181 8265 7.931578 TTTCTCTTTCTGTTTCACCAACTAA 57.068 32.000 0.00 0.00 36.21 2.24
7182 8266 7.931578 TTTTCTCTTTCTGTTTCACCAACTA 57.068 32.000 0.00 0.00 36.21 2.24
7183 8267 6.834168 TTTTCTCTTTCTGTTTCACCAACT 57.166 33.333 0.00 0.00 36.21 3.16
7184 8268 6.697455 GGATTTTCTCTTTCTGTTTCACCAAC 59.303 38.462 0.00 0.00 35.71 3.77
7185 8269 6.379703 TGGATTTTCTCTTTCTGTTTCACCAA 59.620 34.615 0.00 0.00 0.00 3.67
7186 8270 5.890985 TGGATTTTCTCTTTCTGTTTCACCA 59.109 36.000 0.00 0.00 0.00 4.17
7187 8271 6.391227 TGGATTTTCTCTTTCTGTTTCACC 57.609 37.500 0.00 0.00 0.00 4.02
7188 8272 7.220875 GTGTTGGATTTTCTCTTTCTGTTTCAC 59.779 37.037 0.00 0.00 0.00 3.18
7189 8273 7.122650 AGTGTTGGATTTTCTCTTTCTGTTTCA 59.877 33.333 0.00 0.00 0.00 2.69
7190 8274 7.484140 AGTGTTGGATTTTCTCTTTCTGTTTC 58.516 34.615 0.00 0.00 0.00 2.78
7191 8275 7.410120 AGTGTTGGATTTTCTCTTTCTGTTT 57.590 32.000 0.00 0.00 0.00 2.83
7192 8276 7.556275 TGTAGTGTTGGATTTTCTCTTTCTGTT 59.444 33.333 0.00 0.00 0.00 3.16
7193 8277 7.054124 TGTAGTGTTGGATTTTCTCTTTCTGT 58.946 34.615 0.00 0.00 0.00 3.41
7194 8278 7.496529 TGTAGTGTTGGATTTTCTCTTTCTG 57.503 36.000 0.00 0.00 0.00 3.02
7195 8279 7.939039 TGATGTAGTGTTGGATTTTCTCTTTCT 59.061 33.333 0.00 0.00 0.00 2.52
7196 8280 8.017946 GTGATGTAGTGTTGGATTTTCTCTTTC 58.982 37.037 0.00 0.00 0.00 2.62
7197 8281 7.502226 TGTGATGTAGTGTTGGATTTTCTCTTT 59.498 33.333 0.00 0.00 0.00 2.52
7198 8282 6.998074 TGTGATGTAGTGTTGGATTTTCTCTT 59.002 34.615 0.00 0.00 0.00 2.85
7199 8283 6.533730 TGTGATGTAGTGTTGGATTTTCTCT 58.466 36.000 0.00 0.00 0.00 3.10
7200 8284 6.428159 ACTGTGATGTAGTGTTGGATTTTCTC 59.572 38.462 0.00 0.00 0.00 2.87
7201 8285 6.299141 ACTGTGATGTAGTGTTGGATTTTCT 58.701 36.000 0.00 0.00 0.00 2.52
7202 8286 6.204688 TGACTGTGATGTAGTGTTGGATTTTC 59.795 38.462 0.00 0.00 0.00 2.29
7203 8287 6.017109 GTGACTGTGATGTAGTGTTGGATTTT 60.017 38.462 0.00 0.00 0.00 1.82
7204 8288 5.470098 GTGACTGTGATGTAGTGTTGGATTT 59.530 40.000 0.00 0.00 0.00 2.17
7205 8289 4.997395 GTGACTGTGATGTAGTGTTGGATT 59.003 41.667 0.00 0.00 0.00 3.01
7206 8290 4.563580 GGTGACTGTGATGTAGTGTTGGAT 60.564 45.833 0.00 0.00 0.00 3.41
7207 8291 3.244078 GGTGACTGTGATGTAGTGTTGGA 60.244 47.826 0.00 0.00 0.00 3.53
7208 8292 3.067106 GGTGACTGTGATGTAGTGTTGG 58.933 50.000 0.00 0.00 0.00 3.77
7209 8293 3.067106 GGGTGACTGTGATGTAGTGTTG 58.933 50.000 0.00 0.00 0.00 3.33
7210 8294 2.038557 GGGGTGACTGTGATGTAGTGTT 59.961 50.000 0.00 0.00 0.00 3.32
7211 8295 1.623811 GGGGTGACTGTGATGTAGTGT 59.376 52.381 0.00 0.00 0.00 3.55
7212 8296 1.623311 TGGGGTGACTGTGATGTAGTG 59.377 52.381 0.00 0.00 0.00 2.74
7213 8297 2.024176 TGGGGTGACTGTGATGTAGT 57.976 50.000 0.00 0.00 0.00 2.73
7214 8298 4.344968 TGATATGGGGTGACTGTGATGTAG 59.655 45.833 0.00 0.00 0.00 2.74
7215 8299 4.294347 TGATATGGGGTGACTGTGATGTA 58.706 43.478 0.00 0.00 0.00 2.29
7216 8300 3.114606 TGATATGGGGTGACTGTGATGT 58.885 45.455 0.00 0.00 0.00 3.06
7217 8301 3.843893 TGATATGGGGTGACTGTGATG 57.156 47.619 0.00 0.00 0.00 3.07
7218 8302 3.073503 CCATGATATGGGGTGACTGTGAT 59.926 47.826 0.00 0.00 46.86 3.06
7219 8303 2.439135 CCATGATATGGGGTGACTGTGA 59.561 50.000 0.00 0.00 46.86 3.58
7220 8304 2.854963 CCATGATATGGGGTGACTGTG 58.145 52.381 0.00 0.00 46.86 3.66
7231 8315 4.581409 TGTGGTTGATGAAGCCATGATATG 59.419 41.667 0.00 0.00 34.52 1.78
7232 8316 4.795469 TGTGGTTGATGAAGCCATGATAT 58.205 39.130 0.00 0.00 34.52 1.63
7233 8317 4.233632 TGTGGTTGATGAAGCCATGATA 57.766 40.909 0.00 0.00 34.52 2.15
7234 8318 3.090210 TGTGGTTGATGAAGCCATGAT 57.910 42.857 0.00 0.00 34.52 2.45
7235 8319 2.583024 TGTGGTTGATGAAGCCATGA 57.417 45.000 0.00 0.00 34.52 3.07
7236 8320 3.021695 AGATGTGGTTGATGAAGCCATG 58.978 45.455 3.61 0.00 34.52 3.66
7237 8321 3.377253 AGATGTGGTTGATGAAGCCAT 57.623 42.857 0.00 0.00 34.52 4.40
7238 8322 2.885135 AGATGTGGTTGATGAAGCCA 57.115 45.000 0.00 0.00 0.00 4.75
7239 8323 4.454678 TGATAGATGTGGTTGATGAAGCC 58.545 43.478 0.00 0.00 0.00 4.35
7240 8324 4.024218 GCTGATAGATGTGGTTGATGAAGC 60.024 45.833 0.00 0.00 0.00 3.86
7241 8325 5.236695 CAGCTGATAGATGTGGTTGATGAAG 59.763 44.000 8.42 0.00 0.00 3.02
7242 8326 5.121105 CAGCTGATAGATGTGGTTGATGAA 58.879 41.667 8.42 0.00 0.00 2.57
7243 8327 4.443881 CCAGCTGATAGATGTGGTTGATGA 60.444 45.833 17.39 0.00 27.62 2.92
7244 8328 3.813724 CCAGCTGATAGATGTGGTTGATG 59.186 47.826 17.39 0.00 27.62 3.07
7245 8329 3.713248 TCCAGCTGATAGATGTGGTTGAT 59.287 43.478 17.39 0.00 27.62 2.57
7246 8330 3.106827 TCCAGCTGATAGATGTGGTTGA 58.893 45.455 17.39 0.00 27.62 3.18
7247 8331 3.201290 GTCCAGCTGATAGATGTGGTTG 58.799 50.000 17.39 0.00 27.62 3.77
7248 8332 2.159043 CGTCCAGCTGATAGATGTGGTT 60.159 50.000 17.39 0.00 27.62 3.67
7249 8333 1.410517 CGTCCAGCTGATAGATGTGGT 59.589 52.381 17.39 0.00 27.62 4.16
7250 8334 1.269988 CCGTCCAGCTGATAGATGTGG 60.270 57.143 17.39 4.35 27.62 4.17
7251 8335 1.871408 GCCGTCCAGCTGATAGATGTG 60.871 57.143 17.39 5.26 27.62 3.21
7252 8336 0.390860 GCCGTCCAGCTGATAGATGT 59.609 55.000 17.39 0.00 27.62 3.06
7253 8337 0.390492 TGCCGTCCAGCTGATAGATG 59.610 55.000 17.39 9.44 0.00 2.90
7254 8338 0.678395 CTGCCGTCCAGCTGATAGAT 59.322 55.000 17.39 0.00 34.21 1.98
7255 8339 2.119009 CTGCCGTCCAGCTGATAGA 58.881 57.895 17.39 0.20 34.21 1.98
7256 8340 4.746361 CTGCCGTCCAGCTGATAG 57.254 61.111 17.39 5.26 34.21 2.08
7263 8347 2.046023 TGATTGGCTGCCGTCCAG 60.046 61.111 14.98 0.00 44.67 3.86
7264 8348 2.359850 GTGATTGGCTGCCGTCCA 60.360 61.111 14.98 8.34 0.00 4.02
7265 8349 1.971167 TTGTGATTGGCTGCCGTCC 60.971 57.895 14.98 5.65 0.00 4.79
7266 8350 1.210155 GTTGTGATTGGCTGCCGTC 59.790 57.895 14.98 14.85 0.00 4.79
7267 8351 2.616330 CGTTGTGATTGGCTGCCGT 61.616 57.895 14.98 5.00 0.00 5.68
7268 8352 2.176546 CGTTGTGATTGGCTGCCG 59.823 61.111 14.98 0.00 0.00 5.69
7269 8353 2.126346 GCGTTGTGATTGGCTGCC 60.126 61.111 12.87 12.87 0.00 4.85
7270 8354 1.305219 TAGGCGTTGTGATTGGCTGC 61.305 55.000 0.00 0.00 39.07 5.25
7271 8355 1.135689 GTTAGGCGTTGTGATTGGCTG 60.136 52.381 0.00 0.00 39.07 4.85
7272 8356 1.165270 GTTAGGCGTTGTGATTGGCT 58.835 50.000 0.00 0.00 41.76 4.75
7273 8357 0.878416 TGTTAGGCGTTGTGATTGGC 59.122 50.000 0.00 0.00 0.00 4.52
7274 8358 3.252215 TCTTTGTTAGGCGTTGTGATTGG 59.748 43.478 0.00 0.00 0.00 3.16
7275 8359 4.481930 TCTTTGTTAGGCGTTGTGATTG 57.518 40.909 0.00 0.00 0.00 2.67
7276 8360 6.597672 TGATATCTTTGTTAGGCGTTGTGATT 59.402 34.615 3.98 0.00 0.00 2.57
7277 8361 6.112734 TGATATCTTTGTTAGGCGTTGTGAT 58.887 36.000 3.98 0.00 0.00 3.06
7278 8362 5.483811 TGATATCTTTGTTAGGCGTTGTGA 58.516 37.500 3.98 0.00 0.00 3.58
7279 8363 5.220662 CCTGATATCTTTGTTAGGCGTTGTG 60.221 44.000 3.98 0.00 0.00 3.33
7280 8364 4.876107 CCTGATATCTTTGTTAGGCGTTGT 59.124 41.667 3.98 0.00 0.00 3.32
7281 8365 4.876107 ACCTGATATCTTTGTTAGGCGTTG 59.124 41.667 3.98 0.00 0.00 4.10
7282 8366 4.876107 CACCTGATATCTTTGTTAGGCGTT 59.124 41.667 3.98 0.00 0.00 4.84
7283 8367 4.161565 TCACCTGATATCTTTGTTAGGCGT 59.838 41.667 3.98 0.00 0.00 5.68
7284 8368 4.693283 TCACCTGATATCTTTGTTAGGCG 58.307 43.478 3.98 0.00 0.00 5.52
7285 8369 6.203723 GTGATCACCTGATATCTTTGTTAGGC 59.796 42.308 15.31 0.00 34.37 3.93
7286 8370 7.504403 AGTGATCACCTGATATCTTTGTTAGG 58.496 38.462 22.21 3.73 34.37 2.69
7287 8371 8.824781 CAAGTGATCACCTGATATCTTTGTTAG 58.175 37.037 22.21 0.00 34.37 2.34
7288 8372 8.539544 TCAAGTGATCACCTGATATCTTTGTTA 58.460 33.333 20.80 0.77 34.37 2.41
7289 8373 7.397221 TCAAGTGATCACCTGATATCTTTGTT 58.603 34.615 20.80 3.07 34.37 2.83
7290 8374 6.950842 TCAAGTGATCACCTGATATCTTTGT 58.049 36.000 20.80 0.00 34.37 2.83
7291 8375 7.335171 TGTTCAAGTGATCACCTGATATCTTTG 59.665 37.037 24.22 16.99 32.41 2.77
7292 8376 7.397221 TGTTCAAGTGATCACCTGATATCTTT 58.603 34.615 24.22 6.67 32.41 2.52
7293 8377 6.950842 TGTTCAAGTGATCACCTGATATCTT 58.049 36.000 24.22 7.34 32.41 2.40
7294 8378 6.407865 CCTGTTCAAGTGATCACCTGATATCT 60.408 42.308 24.22 1.23 32.41 1.98
7295 8379 5.757320 CCTGTTCAAGTGATCACCTGATATC 59.243 44.000 24.22 17.85 32.41 1.63
7296 8380 5.426509 TCCTGTTCAAGTGATCACCTGATAT 59.573 40.000 24.22 2.70 32.41 1.63
7297 8381 4.777366 TCCTGTTCAAGTGATCACCTGATA 59.223 41.667 24.22 16.33 32.41 2.15
7298 8382 3.584406 TCCTGTTCAAGTGATCACCTGAT 59.416 43.478 24.22 3.81 32.41 2.90
7299 8383 2.972021 TCCTGTTCAAGTGATCACCTGA 59.028 45.455 20.80 20.80 30.52 3.86
7300 8384 3.407424 TCCTGTTCAAGTGATCACCTG 57.593 47.619 22.21 19.42 0.00 4.00
7301 8385 3.648067 TCTTCCTGTTCAAGTGATCACCT 59.352 43.478 22.21 6.69 0.00 4.00
7302 8386 4.008074 TCTTCCTGTTCAAGTGATCACC 57.992 45.455 22.21 7.15 0.00 4.02
7303 8387 5.486526 AGATCTTCCTGTTCAAGTGATCAC 58.513 41.667 18.47 18.47 32.35 3.06
7304 8388 5.752036 AGATCTTCCTGTTCAAGTGATCA 57.248 39.130 0.00 0.00 32.35 2.92
7305 8389 5.936956 ACAAGATCTTCCTGTTCAAGTGATC 59.063 40.000 4.57 0.00 0.00 2.92
7306 8390 5.874093 ACAAGATCTTCCTGTTCAAGTGAT 58.126 37.500 4.57 0.00 0.00 3.06
7307 8391 5.296151 ACAAGATCTTCCTGTTCAAGTGA 57.704 39.130 4.57 0.00 0.00 3.41
7308 8392 6.382869 AAACAAGATCTTCCTGTTCAAGTG 57.617 37.500 4.57 0.00 0.00 3.16
7309 8393 7.227512 CAGTAAACAAGATCTTCCTGTTCAAGT 59.772 37.037 4.57 1.16 0.00 3.16
7310 8394 7.579726 CAGTAAACAAGATCTTCCTGTTCAAG 58.420 38.462 4.57 0.00 0.00 3.02
7311 8395 6.017109 GCAGTAAACAAGATCTTCCTGTTCAA 60.017 38.462 4.57 0.00 0.00 2.69
7312 8396 5.470098 GCAGTAAACAAGATCTTCCTGTTCA 59.530 40.000 4.57 0.00 0.00 3.18
7313 8397 5.470098 TGCAGTAAACAAGATCTTCCTGTTC 59.530 40.000 4.57 0.00 0.00 3.18
7314 8398 5.376625 TGCAGTAAACAAGATCTTCCTGTT 58.623 37.500 4.57 5.18 0.00 3.16
7315 8399 4.973168 TGCAGTAAACAAGATCTTCCTGT 58.027 39.130 4.57 0.00 0.00 4.00
7316 8400 5.702670 TCTTGCAGTAAACAAGATCTTCCTG 59.297 40.000 4.57 7.89 46.46 3.86
7317 8401 5.869579 TCTTGCAGTAAACAAGATCTTCCT 58.130 37.500 4.57 0.00 46.46 3.36
7325 8409 2.863809 ACCCCTCTTGCAGTAAACAAG 58.136 47.619 0.00 0.00 44.76 3.16
7326 8410 2.955660 CAACCCCTCTTGCAGTAAACAA 59.044 45.455 0.00 0.00 0.00 2.83
7327 8411 2.582052 CAACCCCTCTTGCAGTAAACA 58.418 47.619 0.00 0.00 0.00 2.83
7328 8412 1.269723 GCAACCCCTCTTGCAGTAAAC 59.730 52.381 0.00 0.00 45.07 2.01
7329 8413 1.616159 GCAACCCCTCTTGCAGTAAA 58.384 50.000 0.00 0.00 45.07 2.01
7330 8414 3.339547 GCAACCCCTCTTGCAGTAA 57.660 52.632 0.00 0.00 45.07 2.24
7335 8419 0.813821 GAATCAGCAACCCCTCTTGC 59.186 55.000 0.00 0.00 45.93 4.01
7336 8420 1.089920 CGAATCAGCAACCCCTCTTG 58.910 55.000 0.00 0.00 0.00 3.02
7337 8421 0.984230 TCGAATCAGCAACCCCTCTT 59.016 50.000 0.00 0.00 0.00 2.85
7338 8422 0.250513 GTCGAATCAGCAACCCCTCT 59.749 55.000 0.00 0.00 0.00 3.69
7339 8423 0.036388 TGTCGAATCAGCAACCCCTC 60.036 55.000 0.00 0.00 0.00 4.30
7340 8424 0.620556 ATGTCGAATCAGCAACCCCT 59.379 50.000 0.00 0.00 0.00 4.79
7341 8425 0.734889 CATGTCGAATCAGCAACCCC 59.265 55.000 0.00 0.00 0.00 4.95
7342 8426 1.453155 ACATGTCGAATCAGCAACCC 58.547 50.000 0.00 0.00 0.00 4.11
7343 8427 3.623060 ACATACATGTCGAATCAGCAACC 59.377 43.478 0.00 0.00 35.87 3.77
7344 8428 4.864916 ACATACATGTCGAATCAGCAAC 57.135 40.909 0.00 0.00 35.87 4.17
7345 8429 4.332543 GGAACATACATGTCGAATCAGCAA 59.667 41.667 0.00 0.00 40.80 3.91
7346 8430 3.871006 GGAACATACATGTCGAATCAGCA 59.129 43.478 0.00 0.00 40.80 4.41
7347 8431 3.871006 TGGAACATACATGTCGAATCAGC 59.129 43.478 0.00 0.00 40.80 4.26
7364 8448 2.356069 GCTGCCTTAGTTAGCATGGAAC 59.644 50.000 0.00 0.00 38.56 3.62
7365 8449 2.643551 GCTGCCTTAGTTAGCATGGAA 58.356 47.619 0.00 0.00 38.56 3.53
7366 8450 1.134098 GGCTGCCTTAGTTAGCATGGA 60.134 52.381 12.43 0.00 38.56 3.41
7367 8451 1.312815 GGCTGCCTTAGTTAGCATGG 58.687 55.000 12.43 0.00 38.56 3.66
7368 8452 0.940126 CGGCTGCCTTAGTTAGCATG 59.060 55.000 17.92 0.00 38.56 4.06
7369 8453 0.830648 TCGGCTGCCTTAGTTAGCAT 59.169 50.000 17.92 0.00 38.56 3.79
7370 8454 2.282827 TCGGCTGCCTTAGTTAGCA 58.717 52.632 17.92 0.00 39.15 3.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.