Multiple sequence alignment - TraesCS5A01G177700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G177700 chr5A 100.000 5245 0 0 1 5245 375285377 375290621 0.000000e+00 9686.0
1 TraesCS5A01G177700 chr5A 94.186 86 2 3 4321 4404 338413302 338413218 1.530000e-25 128.0
2 TraesCS5A01G177700 chr5A 92.000 50 3 1 2250 2299 564602347 564602299 9.420000e-08 69.4
3 TraesCS5A01G177700 chr5A 100.000 28 0 0 2181 2208 404995848 404995821 9.000000e-03 52.8
4 TraesCS5A01G177700 chr5B 90.549 910 39 11 1 899 321211697 321212570 0.000000e+00 1160.0
5 TraesCS5A01G177700 chr5B 92.112 748 44 9 1354 2092 321215056 321215797 0.000000e+00 1040.0
6 TraesCS5A01G177700 chr5B 94.083 507 19 4 2780 3278 321216638 321217141 0.000000e+00 760.0
7 TraesCS5A01G177700 chr5B 94.683 489 22 3 3838 4322 321217412 321217900 0.000000e+00 756.0
8 TraesCS5A01G177700 chr5B 93.932 412 20 3 890 1299 321214632 321215040 7.460000e-173 617.0
9 TraesCS5A01G177700 chr5B 91.289 287 10 4 3457 3743 321217142 321217413 1.380000e-100 377.0
10 TraesCS5A01G177700 chr5B 85.131 343 23 5 4266 4582 321217994 321218334 5.070000e-85 326.0
11 TraesCS5A01G177700 chr5B 88.477 243 26 1 2494 2734 321216409 321216651 5.140000e-75 292.0
12 TraesCS5A01G177700 chr5B 96.078 102 3 1 4403 4504 321217899 321217999 1.170000e-36 165.0
13 TraesCS5A01G177700 chr5B 91.667 84 6 1 2102 2184 321215866 321215949 1.190000e-21 115.0
14 TraesCS5A01G177700 chr5B 92.157 51 4 0 2176 2226 679558785 679558735 7.290000e-09 73.1
15 TraesCS5A01G177700 chr5B 95.455 44 2 0 2254 2297 679558737 679558780 2.620000e-08 71.3
16 TraesCS5A01G177700 chr5B 100.000 29 0 0 2178 2206 298680808 298680836 3.000000e-03 54.7
17 TraesCS5A01G177700 chr5D 95.298 638 25 4 4612 5245 544617557 544616921 0.000000e+00 1007.0
18 TraesCS5A01G177700 chr5D 84.752 1010 89 29 2780 3743 283010170 283011160 0.000000e+00 952.0
19 TraesCS5A01G177700 chr5D 93.344 646 33 9 4607 5245 426402369 426403011 0.000000e+00 946.0
20 TraesCS5A01G177700 chr5D 93.878 490 25 4 3838 4322 283011159 283011648 0.000000e+00 734.0
21 TraesCS5A01G177700 chr5D 85.737 624 56 17 691 1299 283008252 283008857 3.450000e-176 628.0
22 TraesCS5A01G177700 chr5D 93.909 197 9 2 1363 1556 283008881 283009077 1.430000e-75 294.0
23 TraesCS5A01G177700 chr5D 84.028 288 14 5 4325 4582 283011843 283012128 1.130000e-61 248.0
24 TraesCS5A01G177700 chr5D 97.059 102 3 0 4403 4504 283011647 283011748 6.980000e-39 172.0
25 TraesCS5A01G177700 chr5D 88.350 103 9 3 3738 3839 491004702 491004602 2.570000e-23 121.0
26 TraesCS5A01G177700 chr5D 91.071 56 4 1 232 287 283007837 283007891 2.030000e-09 75.0
27 TraesCS5A01G177700 chr5D 86.667 60 6 2 2254 2312 115410328 115410270 1.220000e-06 65.8
28 TraesCS5A01G177700 chr6D 94.154 650 27 7 4607 5245 41907503 41908152 0.000000e+00 979.0
29 TraesCS5A01G177700 chr6D 94.505 637 28 4 4610 5245 347437582 347438212 0.000000e+00 976.0
30 TraesCS5A01G177700 chr6D 93.558 652 34 7 4599 5245 430883181 430883829 0.000000e+00 965.0
31 TraesCS5A01G177700 chr6D 89.815 108 6 4 4301 4405 126426555 126426660 3.300000e-27 134.0
32 TraesCS5A01G177700 chr6D 74.324 148 38 0 4045 4192 53761742 53761595 4.380000e-06 63.9
33 TraesCS5A01G177700 chr6D 93.023 43 3 0 2256 2298 468839899 468839941 4.380000e-06 63.9
34 TraesCS5A01G177700 chr6D 94.872 39 2 0 4090 4128 53774545 53774507 1.580000e-05 62.1
35 TraesCS5A01G177700 chrUn 94.219 640 32 4 4607 5245 108805975 108805340 0.000000e+00 972.0
36 TraesCS5A01G177700 chrUn 100.000 28 0 0 2270 2297 27714299 27714272 9.000000e-03 52.8
37 TraesCS5A01G177700 chr3D 94.201 638 31 4 4610 5245 515674337 515673704 0.000000e+00 968.0
38 TraesCS5A01G177700 chr3D 92.857 42 3 0 2256 2297 25130732 25130773 1.580000e-05 62.1
39 TraesCS5A01G177700 chr3D 90.476 42 4 0 2259 2300 473829209 473829168 7.340000e-04 56.5
40 TraesCS5A01G177700 chr7D 94.035 637 35 2 4610 5245 85021649 85021015 0.000000e+00 963.0
41 TraesCS5A01G177700 chr7D 94.382 89 3 2 4318 4404 523077248 523077336 9.160000e-28 135.0
42 TraesCS5A01G177700 chr7D 93.258 89 5 1 4318 4405 493547898 493547810 4.260000e-26 130.0
43 TraesCS5A01G177700 chr7D 95.652 46 1 1 2734 2779 633166174 633166218 7.290000e-09 73.1
44 TraesCS5A01G177700 chr3A 93.906 640 34 3 4607 5245 102343865 102343230 0.000000e+00 961.0
45 TraesCS5A01G177700 chr3A 91.753 97 4 3 3741 3836 80090860 80090953 1.190000e-26 132.0
46 TraesCS5A01G177700 chr3A 97.826 46 1 0 2734 2779 298151297 298151252 4.350000e-11 80.5
47 TraesCS5A01G177700 chr3A 95.652 46 2 0 2734 2779 718343992 718344037 2.030000e-09 75.0
48 TraesCS5A01G177700 chr2D 94.444 90 4 1 4321 4409 378043094 378043183 2.550000e-28 137.0
49 TraesCS5A01G177700 chr2D 94.318 88 4 1 4318 4404 217496904 217496991 3.300000e-27 134.0
50 TraesCS5A01G177700 chr2D 89.109 101 9 2 3739 3838 83966784 83966685 1.980000e-24 124.0
51 TraesCS5A01G177700 chr2D 87.037 108 10 2 3739 3842 395597100 395597207 9.230000e-23 119.0
52 TraesCS5A01G177700 chr2D 95.349 43 1 1 2256 2298 467971383 467971342 3.390000e-07 67.6
53 TraesCS5A01G177700 chr2D 90.000 50 5 0 2252 2301 11861758 11861807 1.220000e-06 65.8
54 TraesCS5A01G177700 chr2D 90.000 50 4 1 2250 2299 467971380 467971428 4.380000e-06 63.9
55 TraesCS5A01G177700 chr6B 94.382 89 4 1 4318 4405 471227576 471227664 9.160000e-28 135.0
56 TraesCS5A01G177700 chr6B 89.796 98 7 2 3742 3839 553058987 553059081 7.130000e-24 122.0
57 TraesCS5A01G177700 chr6B 95.745 47 0 2 2734 2779 68753227 68753182 2.030000e-09 75.0
58 TraesCS5A01G177700 chr6B 92.157 51 4 0 2178 2228 674566013 674565963 7.290000e-09 73.1
59 TraesCS5A01G177700 chr6B 93.750 48 2 1 2250 2297 674565964 674566010 2.620000e-08 71.3
60 TraesCS5A01G177700 chr6B 80.000 85 15 2 4045 4128 117707439 117707522 1.580000e-05 62.1
61 TraesCS5A01G177700 chr6B 100.000 28 0 0 2180 2207 696332667 696332694 9.000000e-03 52.8
62 TraesCS5A01G177700 chr7B 90.385 104 5 2 3737 3839 64413004 64413103 1.190000e-26 132.0
63 TraesCS5A01G177700 chr7B 93.878 49 1 2 2733 2779 10577213 10577165 7.290000e-09 73.1
64 TraesCS5A01G177700 chr7B 91.667 48 4 0 2257 2304 699840722 699840675 3.390000e-07 67.6
65 TraesCS5A01G177700 chr7B 90.000 50 5 0 2179 2228 652133196 652133245 1.220000e-06 65.8
66 TraesCS5A01G177700 chr7B 91.667 48 3 1 2250 2297 652133244 652133198 1.220000e-06 65.8
67 TraesCS5A01G177700 chr4B 89.623 106 7 4 3737 3839 544445382 544445278 1.190000e-26 132.0
68 TraesCS5A01G177700 chr4B 94.872 39 0 2 2265 2303 356439162 356439198 5.670000e-05 60.2
69 TraesCS5A01G177700 chr4B 100.000 29 0 0 2180 2208 171619484 171619512 3.000000e-03 54.7
70 TraesCS5A01G177700 chr2B 89.899 99 9 1 4307 4404 150613561 150613463 5.510000e-25 126.0
71 TraesCS5A01G177700 chr2B 93.878 49 1 2 2733 2779 782832748 782832796 7.290000e-09 73.1
72 TraesCS5A01G177700 chr2B 93.878 49 1 2 2733 2779 782957781 782957829 7.290000e-09 73.1
73 TraesCS5A01G177700 chr1B 89.423 104 6 2 3737 3839 26096831 26096930 5.510000e-25 126.0
74 TraesCS5A01G177700 chr1B 92.857 42 1 2 2180 2220 513163334 513163294 5.670000e-05 60.2
75 TraesCS5A01G177700 chr1B 92.500 40 3 0 2258 2297 513163294 513163333 2.040000e-04 58.4
76 TraesCS5A01G177700 chr1B 97.059 34 1 0 192 225 594648773 594648740 2.040000e-04 58.4
77 TraesCS5A01G177700 chr2A 88.350 103 9 3 3742 3842 746253495 746253394 2.570000e-23 121.0
78 TraesCS5A01G177700 chr2A 95.349 43 2 0 2256 2298 608647315 608647273 9.420000e-08 69.4
79 TraesCS5A01G177700 chr2A 100.000 28 0 0 2179 2206 39177873 39177846 9.000000e-03 52.8
80 TraesCS5A01G177700 chr3B 95.000 60 2 1 1417 1475 804987495 804987554 5.590000e-15 93.5
81 TraesCS5A01G177700 chr3B 87.500 56 6 1 2173 2228 704033445 704033391 4.380000e-06 63.9
82 TraesCS5A01G177700 chr3B 89.796 49 4 1 2181 2228 561542893 561542845 1.580000e-05 62.1
83 TraesCS5A01G177700 chr7A 95.745 47 1 1 2734 2779 1953664 1953710 2.030000e-09 75.0
84 TraesCS5A01G177700 chr1D 93.617 47 3 0 2733 2779 310164824 310164870 2.620000e-08 71.3
85 TraesCS5A01G177700 chr4A 93.333 45 3 0 2181 2225 467543849 467543805 3.390000e-07 67.6
86 TraesCS5A01G177700 chr1A 95.238 42 2 0 2256 2297 304031929 304031888 3.390000e-07 67.6
87 TraesCS5A01G177700 chr1A 92.857 42 3 0 2256 2297 58191727 58191686 1.580000e-05 62.1
88 TraesCS5A01G177700 chr1A 100.000 29 0 0 2269 2297 21627409 21627381 3.000000e-03 54.7
89 TraesCS5A01G177700 chr6A 80.000 85 15 2 4045 4128 61212487 61212570 1.580000e-05 62.1
90 TraesCS5A01G177700 chr6A 91.304 46 3 1 2256 2301 569998878 569998834 1.580000e-05 62.1
91 TraesCS5A01G177700 chr6A 100.000 28 0 0 2179 2206 569998914 569998887 9.000000e-03 52.8
92 TraesCS5A01G177700 chr4D 92.500 40 3 0 2258 2297 55271491 55271530 2.040000e-04 58.4
93 TraesCS5A01G177700 chr4D 100.000 30 0 0 2269 2298 499576766 499576795 7.340000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G177700 chr5A 375285377 375290621 5244 False 9686.000000 9686 100.0000 1 5245 1 chr5A.!!$F1 5244
1 TraesCS5A01G177700 chr5B 321211697 321218334 6637 False 560.800000 1160 91.8001 1 4582 10 chr5B.!!$F3 4581
2 TraesCS5A01G177700 chr5D 544616921 544617557 636 True 1007.000000 1007 95.2980 4612 5245 1 chr5D.!!$R3 633
3 TraesCS5A01G177700 chr5D 426402369 426403011 642 False 946.000000 946 93.3440 4607 5245 1 chr5D.!!$F1 638
4 TraesCS5A01G177700 chr5D 283007837 283012128 4291 False 443.285714 952 90.0620 232 4582 7 chr5D.!!$F2 4350
5 TraesCS5A01G177700 chr6D 41907503 41908152 649 False 979.000000 979 94.1540 4607 5245 1 chr6D.!!$F1 638
6 TraesCS5A01G177700 chr6D 347437582 347438212 630 False 976.000000 976 94.5050 4610 5245 1 chr6D.!!$F3 635
7 TraesCS5A01G177700 chr6D 430883181 430883829 648 False 965.000000 965 93.5580 4599 5245 1 chr6D.!!$F4 646
8 TraesCS5A01G177700 chrUn 108805340 108805975 635 True 972.000000 972 94.2190 4607 5245 1 chrUn.!!$R2 638
9 TraesCS5A01G177700 chr3D 515673704 515674337 633 True 968.000000 968 94.2010 4610 5245 1 chr3D.!!$R2 635
10 TraesCS5A01G177700 chr7D 85021015 85021649 634 True 963.000000 963 94.0350 4610 5245 1 chr7D.!!$R1 635
11 TraesCS5A01G177700 chr3A 102343230 102343865 635 True 961.000000 961 93.9060 4607 5245 1 chr3A.!!$R1 638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
72 73 1.063469 GTTTGTTCCCTGTGTCACACG 59.937 52.381 2.82 0.0 37.14 4.49 F
787 1031 1.130938 TCATGCTGCAAACGTATGCTG 59.869 47.619 6.36 0.0 46.54 4.41 F
2220 4762 0.038067 TAAGACAGCGCGGCAGTTTA 60.038 50.000 8.83 0.0 0.00 2.01 F
2255 4797 0.034896 CTGCCCCGCCGTCTTATATT 59.965 55.000 0.00 0.0 0.00 1.28 F
2710 5524 0.036858 GAGGTCCTCACCACAGAAGC 60.037 60.000 14.46 0.0 46.68 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1480 3810 0.040157 TATCGAACCCGTAATCGCCG 60.040 55.000 0.00 0.00 38.87 6.46 R
2256 4798 0.240678 TAAGACGTCGCGGCAGTTTA 59.759 50.000 12.89 2.38 37.34 2.01 R
3404 6264 0.032678 CGTAGCAGATAGGTGGCAGG 59.967 60.000 0.00 0.00 0.00 4.85 R
3432 6292 1.727880 CAATTTGCCCATTTCACAGCG 59.272 47.619 0.00 0.00 0.00 5.18 R
4583 7677 0.179156 CATCTGCATCCAAACACGCC 60.179 55.000 0.00 0.00 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.048504 CCTGCGGATGCTTTTTATATCATGT 60.049 40.000 0.00 0.00 43.34 3.21
68 69 2.285083 CGAAGTTTGTTCCCTGTGTCA 58.715 47.619 0.00 0.00 0.00 3.58
72 73 1.063469 GTTTGTTCCCTGTGTCACACG 59.937 52.381 2.82 0.00 37.14 4.49
150 151 3.430929 CCTTTCGGCTATACAGTTCAGCT 60.431 47.826 6.15 0.00 35.60 4.24
172 173 2.258755 AGCAAACGCACAGAAAAACAC 58.741 42.857 0.00 0.00 0.00 3.32
201 202 9.268282 TCTTCCAGTTAATTTCATACTACCTCT 57.732 33.333 0.00 0.00 0.00 3.69
246 247 5.359194 TGATTTCCAGAGGGAGTATTGTC 57.641 43.478 0.00 0.00 46.01 3.18
333 334 8.896744 CAATATGTGAAATACCTCAGTCAATGT 58.103 33.333 0.00 0.00 0.00 2.71
369 370 8.059798 ACAAAATCCTAGTTTCCATGAATCAG 57.940 34.615 0.00 0.00 0.00 2.90
405 406 4.152223 GCTTGGTGCATAAACAAATCAACC 59.848 41.667 0.00 0.00 42.31 3.77
407 408 2.666022 GGTGCATAAACAAATCAACCGC 59.334 45.455 0.00 0.00 0.00 5.68
434 436 3.118482 TGCATTGGTTGATTTGTTGGTGT 60.118 39.130 0.00 0.00 0.00 4.16
452 454 3.817647 GGTGTGATGCTAGATTTCATCCC 59.182 47.826 0.00 0.00 38.57 3.85
459 461 5.393068 TGCTAGATTTCATCCCATCCTTT 57.607 39.130 0.00 0.00 0.00 3.11
487 490 8.568676 TTTTTCATTACATCCACCTTCGATAA 57.431 30.769 0.00 0.00 0.00 1.75
488 491 8.568676 TTTTCATTACATCCACCTTCGATAAA 57.431 30.769 0.00 0.00 0.00 1.40
506 509 6.199531 TCGATAAAACCTTCGATAAATGTCCG 59.800 38.462 0.00 0.00 39.29 4.79
522 525 2.342279 CGGTGTCTGGAAGCGGAA 59.658 61.111 0.00 0.00 35.01 4.30
532 535 4.078537 TCTGGAAGCGGAAATTCATTTGA 58.921 39.130 0.00 0.00 0.00 2.69
642 645 2.081526 GCGTGTGTTCTGATGCGAT 58.918 52.632 0.00 0.00 0.00 4.58
645 648 2.534939 GCGTGTGTTCTGATGCGATTAC 60.535 50.000 0.00 0.00 0.00 1.89
646 649 2.284457 CGTGTGTTCTGATGCGATTACG 60.284 50.000 0.00 0.00 42.93 3.18
659 662 1.903139 CGATTACGACGGACGATATGC 59.097 52.381 6.90 0.00 45.77 3.14
669 888 1.471501 GGACGATATGCTGCAGTGTCA 60.472 52.381 16.64 5.17 0.00 3.58
722 966 5.714047 TGTTGCACTGTTGTGTTTGAAATA 58.286 33.333 0.00 0.00 45.44 1.40
772 1016 6.746364 GTGAGAAAAAGAAGATGTGATCATGC 59.254 38.462 0.00 0.00 34.06 4.06
785 1029 2.223317 TGATCATGCTGCAAACGTATGC 60.223 45.455 6.36 0.00 46.58 3.14
786 1030 1.452110 TCATGCTGCAAACGTATGCT 58.548 45.000 6.36 0.00 46.54 3.79
787 1031 1.130938 TCATGCTGCAAACGTATGCTG 59.869 47.619 6.36 0.00 46.54 4.41
792 1046 2.794350 GCTGCAAACGTATGCTGTTTTT 59.206 40.909 0.00 0.00 46.54 1.94
865 1119 1.623686 ATCCAATGGCCAGGGAGGT 60.624 57.895 27.34 13.85 40.61 3.85
892 1146 2.231380 TTGTCCCTCCCCTGCCTTC 61.231 63.158 0.00 0.00 0.00 3.46
939 3265 3.343421 GTGCCACGTCCACGGTTC 61.343 66.667 3.81 0.00 44.95 3.62
968 3294 1.822990 AGCATTTCATTCCACTGCCTG 59.177 47.619 0.00 0.00 33.34 4.85
1014 3340 2.041265 ACGATGCCTCCCCTCCTT 59.959 61.111 0.00 0.00 0.00 3.36
1026 3352 2.364317 CTCCTTCTCCGCTCCCCA 60.364 66.667 0.00 0.00 0.00 4.96
1071 3397 3.199190 CGGCGGCGGAAAAGCATA 61.199 61.111 25.36 0.00 39.27 3.14
1076 3402 1.632046 CGGCGGAAAAGCATACGTGT 61.632 55.000 0.00 0.00 39.27 4.49
1205 3531 1.229209 TCGAGTCCAGGAAGGCCTT 60.229 57.895 20.65 20.65 43.90 4.35
1272 3598 1.330655 GCAGCTCCAGGTAGGCACTA 61.331 60.000 0.00 0.00 41.75 2.74
1291 3618 1.751437 ATCGCCTCCTTACAAAAGCC 58.249 50.000 0.00 0.00 0.00 4.35
1299 3626 1.335872 CCTTACAAAAGCCAAGCCGTG 60.336 52.381 0.00 0.00 0.00 4.94
1311 3638 3.542712 CAAGCCGTGGATATTGTATGC 57.457 47.619 0.00 0.00 0.00 3.14
1312 3639 3.141398 CAAGCCGTGGATATTGTATGCT 58.859 45.455 0.00 0.00 0.00 3.79
1313 3640 3.492102 AGCCGTGGATATTGTATGCTT 57.508 42.857 0.00 0.00 0.00 3.91
1314 3641 4.617253 AGCCGTGGATATTGTATGCTTA 57.383 40.909 0.00 0.00 0.00 3.09
1315 3642 5.165961 AGCCGTGGATATTGTATGCTTAT 57.834 39.130 0.00 0.00 0.00 1.73
1316 3643 4.937620 AGCCGTGGATATTGTATGCTTATG 59.062 41.667 0.00 0.00 0.00 1.90
1317 3644 4.695455 GCCGTGGATATTGTATGCTTATGT 59.305 41.667 0.00 0.00 0.00 2.29
1318 3645 5.872617 GCCGTGGATATTGTATGCTTATGTA 59.127 40.000 0.00 0.00 0.00 2.29
1319 3646 6.538742 GCCGTGGATATTGTATGCTTATGTAT 59.461 38.462 0.00 0.00 0.00 2.29
1320 3647 7.465916 GCCGTGGATATTGTATGCTTATGTATG 60.466 40.741 0.00 0.00 0.00 2.39
1321 3648 7.549134 CCGTGGATATTGTATGCTTATGTATGT 59.451 37.037 0.00 0.00 0.00 2.29
1322 3649 8.935844 CGTGGATATTGTATGCTTATGTATGTT 58.064 33.333 0.00 0.00 0.00 2.71
1327 3654 9.929180 ATATTGTATGCTTATGTATGTTCTCGT 57.071 29.630 0.00 0.00 0.00 4.18
1328 3655 7.694388 TTGTATGCTTATGTATGTTCTCGTC 57.306 36.000 0.00 0.00 0.00 4.20
1329 3656 6.801575 TGTATGCTTATGTATGTTCTCGTCA 58.198 36.000 0.00 0.00 0.00 4.35
1330 3657 7.262048 TGTATGCTTATGTATGTTCTCGTCAA 58.738 34.615 0.00 0.00 0.00 3.18
1331 3658 7.926018 TGTATGCTTATGTATGTTCTCGTCAAT 59.074 33.333 0.00 0.00 0.00 2.57
1332 3659 7.792374 ATGCTTATGTATGTTCTCGTCAATT 57.208 32.000 0.00 0.00 0.00 2.32
1333 3660 7.234187 TGCTTATGTATGTTCTCGTCAATTC 57.766 36.000 0.00 0.00 0.00 2.17
1334 3661 7.041721 TGCTTATGTATGTTCTCGTCAATTCT 58.958 34.615 0.00 0.00 0.00 2.40
1335 3662 7.222805 TGCTTATGTATGTTCTCGTCAATTCTC 59.777 37.037 0.00 0.00 0.00 2.87
1336 3663 7.306866 GCTTATGTATGTTCTCGTCAATTCTCC 60.307 40.741 0.00 0.00 0.00 3.71
1337 3664 4.421058 TGTATGTTCTCGTCAATTCTCCG 58.579 43.478 0.00 0.00 0.00 4.63
1338 3665 3.594603 ATGTTCTCGTCAATTCTCCGT 57.405 42.857 0.00 0.00 0.00 4.69
1339 3666 3.380479 TGTTCTCGTCAATTCTCCGTT 57.620 42.857 0.00 0.00 0.00 4.44
1340 3667 4.508461 TGTTCTCGTCAATTCTCCGTTA 57.492 40.909 0.00 0.00 0.00 3.18
1341 3668 4.482386 TGTTCTCGTCAATTCTCCGTTAG 58.518 43.478 0.00 0.00 0.00 2.34
1342 3669 4.022589 TGTTCTCGTCAATTCTCCGTTAGT 60.023 41.667 0.00 0.00 0.00 2.24
1343 3670 4.778534 TCTCGTCAATTCTCCGTTAGTT 57.221 40.909 0.00 0.00 0.00 2.24
1344 3671 5.130292 TCTCGTCAATTCTCCGTTAGTTT 57.870 39.130 0.00 0.00 0.00 2.66
1345 3672 4.921515 TCTCGTCAATTCTCCGTTAGTTTG 59.078 41.667 0.00 0.00 0.00 2.93
1346 3673 4.624015 TCGTCAATTCTCCGTTAGTTTGT 58.376 39.130 0.00 0.00 0.00 2.83
1347 3674 4.446385 TCGTCAATTCTCCGTTAGTTTGTG 59.554 41.667 0.00 0.00 0.00 3.33
1348 3675 4.464112 GTCAATTCTCCGTTAGTTTGTGC 58.536 43.478 0.00 0.00 0.00 4.57
1349 3676 3.185594 TCAATTCTCCGTTAGTTTGTGCG 59.814 43.478 0.00 0.00 0.00 5.34
1350 3677 2.512485 TTCTCCGTTAGTTTGTGCGA 57.488 45.000 0.00 0.00 0.00 5.10
1351 3678 2.512485 TCTCCGTTAGTTTGTGCGAA 57.488 45.000 0.00 0.00 0.00 4.70
1352 3679 3.034721 TCTCCGTTAGTTTGTGCGAAT 57.965 42.857 0.00 0.00 0.00 3.34
1353 3680 2.734606 TCTCCGTTAGTTTGTGCGAATG 59.265 45.455 0.00 0.00 0.00 2.67
1354 3681 2.734606 CTCCGTTAGTTTGTGCGAATGA 59.265 45.455 0.00 0.00 0.00 2.57
1355 3682 3.132160 TCCGTTAGTTTGTGCGAATGAA 58.868 40.909 0.00 0.00 0.00 2.57
1356 3683 3.059461 TCCGTTAGTTTGTGCGAATGAAC 60.059 43.478 0.00 0.00 0.00 3.18
1359 3686 2.405892 AGTTTGTGCGAATGAACTGC 57.594 45.000 0.00 0.00 31.59 4.40
1377 3704 1.966451 CACTGACCTCCCGGTTTGC 60.966 63.158 0.00 0.00 45.73 3.68
1391 3718 2.094752 CGGTTTGCTTGGGGAACTTATG 60.095 50.000 0.00 0.00 0.00 1.90
1420 3750 3.588817 TTGGTACGGGGGAGCTCGA 62.589 63.158 7.83 0.00 0.00 4.04
1480 3810 3.787001 CTGGCCGGAGAGTTCCCC 61.787 72.222 5.28 0.00 40.67 4.81
1565 3895 0.676782 GTATGTCACCCACTGCCCAC 60.677 60.000 0.00 0.00 0.00 4.61
1646 3976 4.470462 CTTGCAAGTTACAGCTGAATCAC 58.530 43.478 23.35 10.71 0.00 3.06
1688 4018 8.383619 CACTAGTGTTTGATGAATAGTTACTGC 58.616 37.037 15.06 0.00 0.00 4.40
1702 4032 5.677319 AGTTACTGCTTAGTGCCTGATTA 57.323 39.130 0.00 0.00 42.00 1.75
1738 4068 1.667724 CTAATTGTGCCTGCTCTTCCG 59.332 52.381 0.00 0.00 0.00 4.30
1745 4078 1.134699 TGCCTGCTCTTCCGATAGTTG 60.135 52.381 0.00 0.00 0.00 3.16
1763 4096 1.153229 GTTAGGCACTTAGGGGGCG 60.153 63.158 0.00 0.00 41.75 6.13
1821 4154 1.688942 GGGATTTGATCATGTGCCCCA 60.689 52.381 0.00 0.00 32.98 4.96
1835 4168 1.622811 TGCCCCATTTTACTTTGGCAG 59.377 47.619 0.00 0.00 43.49 4.85
1888 4223 5.840243 AATATGCCCCGTTTTACTTTACC 57.160 39.130 0.00 0.00 0.00 2.85
2006 4341 2.160721 TTCCTAGCTTCGTGGGAGAT 57.839 50.000 0.00 0.00 0.00 2.75
2046 4383 1.279840 GCGACGATATGCTTTGGCC 59.720 57.895 0.00 0.00 37.74 5.36
2061 4398 0.679640 TGGCCCTACAGAATTTGGCG 60.680 55.000 0.00 0.00 43.09 5.69
2064 4401 2.361789 GCCCTACAGAATTTGGCGTAA 58.638 47.619 0.00 0.00 31.55 3.18
2065 4402 2.096980 GCCCTACAGAATTTGGCGTAAC 59.903 50.000 0.00 0.00 31.55 2.50
2195 4737 8.980832 AGAAATCATATACTACCTCCATTCCT 57.019 34.615 0.00 0.00 0.00 3.36
2207 4749 9.670442 ACTACCTCCATTCCTAAATATAAGACA 57.330 33.333 0.00 0.00 0.00 3.41
2209 4751 7.454225 ACCTCCATTCCTAAATATAAGACAGC 58.546 38.462 0.00 0.00 0.00 4.40
2210 4752 6.591834 CCTCCATTCCTAAATATAAGACAGCG 59.408 42.308 0.00 0.00 0.00 5.18
2211 4753 5.932303 TCCATTCCTAAATATAAGACAGCGC 59.068 40.000 0.00 0.00 0.00 5.92
2214 4756 2.412089 CCTAAATATAAGACAGCGCGGC 59.588 50.000 8.83 1.49 0.00 6.53
2215 4757 1.948104 AAATATAAGACAGCGCGGCA 58.052 45.000 8.83 0.00 0.00 5.69
2216 4758 1.502231 AATATAAGACAGCGCGGCAG 58.498 50.000 8.83 0.00 0.00 4.85
2220 4762 0.038067 TAAGACAGCGCGGCAGTTTA 60.038 50.000 8.83 0.00 0.00 2.01
2224 4766 0.596082 ACAGCGCGGCAGTTTAAATT 59.404 45.000 8.83 0.00 0.00 1.82
2225 4767 1.807742 ACAGCGCGGCAGTTTAAATTA 59.192 42.857 8.83 0.00 0.00 1.40
2226 4768 2.226912 ACAGCGCGGCAGTTTAAATTAA 59.773 40.909 8.83 0.00 0.00 1.40
2227 4769 3.238441 CAGCGCGGCAGTTTAAATTAAA 58.762 40.909 8.83 0.00 0.00 1.52
2228 4770 3.300590 CAGCGCGGCAGTTTAAATTAAAG 59.699 43.478 8.83 0.00 0.00 1.85
2229 4771 3.057806 AGCGCGGCAGTTTAAATTAAAGT 60.058 39.130 8.83 0.00 0.00 2.66
2230 4772 4.154556 AGCGCGGCAGTTTAAATTAAAGTA 59.845 37.500 8.83 0.00 30.54 2.24
2231 4773 5.032220 GCGCGGCAGTTTAAATTAAAGTAT 58.968 37.500 8.83 0.00 30.54 2.12
2232 4774 5.513849 GCGCGGCAGTTTAAATTAAAGTATT 59.486 36.000 8.83 0.00 30.54 1.89
2234 4776 7.218583 GCGCGGCAGTTTAAATTAAAGTATTAA 59.781 33.333 8.83 0.00 35.57 1.40
2244 4786 4.968812 TTAAAGTATTAAACTGCCCCGC 57.031 40.909 0.00 0.00 38.88 6.13
2245 4787 1.758936 AAGTATTAAACTGCCCCGCC 58.241 50.000 0.00 0.00 38.88 6.13
2246 4788 0.463116 AGTATTAAACTGCCCCGCCG 60.463 55.000 0.00 0.00 36.93 6.46
2247 4789 0.745486 GTATTAAACTGCCCCGCCGT 60.745 55.000 0.00 0.00 0.00 5.68
2248 4790 0.462403 TATTAAACTGCCCCGCCGTC 60.462 55.000 0.00 0.00 0.00 4.79
2249 4791 2.193087 ATTAAACTGCCCCGCCGTCT 62.193 55.000 0.00 0.00 0.00 4.18
2251 4793 1.543065 TAAACTGCCCCGCCGTCTTA 61.543 55.000 0.00 0.00 0.00 2.10
2252 4794 2.193087 AAACTGCCCCGCCGTCTTAT 62.193 55.000 0.00 0.00 0.00 1.73
2254 4796 1.119574 ACTGCCCCGCCGTCTTATAT 61.120 55.000 0.00 0.00 0.00 0.86
2255 4797 0.034896 CTGCCCCGCCGTCTTATATT 59.965 55.000 0.00 0.00 0.00 1.28
2256 4798 0.470766 TGCCCCGCCGTCTTATATTT 59.529 50.000 0.00 0.00 0.00 1.40
2258 4800 2.104451 TGCCCCGCCGTCTTATATTTAA 59.896 45.455 0.00 0.00 0.00 1.52
2261 4803 4.383173 CCCCGCCGTCTTATATTTAAACT 58.617 43.478 0.00 0.00 0.00 2.66
2262 4804 4.212636 CCCCGCCGTCTTATATTTAAACTG 59.787 45.833 0.00 0.00 0.00 3.16
2263 4805 4.319261 CCCGCCGTCTTATATTTAAACTGC 60.319 45.833 0.00 0.00 0.00 4.40
2264 4806 4.319261 CCGCCGTCTTATATTTAAACTGCC 60.319 45.833 0.00 0.00 0.00 4.85
2265 4807 4.607557 CGCCGTCTTATATTTAAACTGCCG 60.608 45.833 0.00 0.00 0.00 5.69
2266 4808 4.769215 CCGTCTTATATTTAAACTGCCGC 58.231 43.478 0.00 0.00 0.00 6.53
2267 4809 4.442705 CGTCTTATATTTAAACTGCCGCG 58.557 43.478 0.00 0.00 0.00 6.46
2268 4810 4.207635 CGTCTTATATTTAAACTGCCGCGA 59.792 41.667 8.23 0.00 0.00 5.87
2269 4811 5.429615 GTCTTATATTTAAACTGCCGCGAC 58.570 41.667 8.23 0.00 0.00 5.19
2270 4812 4.207635 TCTTATATTTAAACTGCCGCGACG 59.792 41.667 8.23 0.00 0.00 5.12
2271 4813 1.712401 TATTTAAACTGCCGCGACGT 58.288 45.000 8.23 0.00 0.00 4.34
2272 4814 0.441145 ATTTAAACTGCCGCGACGTC 59.559 50.000 8.23 5.18 0.00 4.34
2273 4815 0.598158 TTTAAACTGCCGCGACGTCT 60.598 50.000 14.70 0.00 0.00 4.18
2274 4816 0.598158 TTAAACTGCCGCGACGTCTT 60.598 50.000 14.70 0.69 0.00 3.01
2279 4821 1.066605 ACTGCCGCGACGTCTTATATT 59.933 47.619 14.70 0.00 0.00 1.28
2280 4822 2.124903 CTGCCGCGACGTCTTATATTT 58.875 47.619 14.70 0.00 0.00 1.40
2282 4824 3.302555 TGCCGCGACGTCTTATATTTAG 58.697 45.455 14.70 0.00 0.00 1.85
2283 4825 2.660236 GCCGCGACGTCTTATATTTAGG 59.340 50.000 14.70 4.66 0.00 2.69
2284 4826 3.610114 GCCGCGACGTCTTATATTTAGGA 60.610 47.826 14.70 0.00 0.00 2.94
2286 4828 5.159209 CCGCGACGTCTTATATTTAGGAAT 58.841 41.667 14.70 0.00 0.00 3.01
2287 4829 5.060569 CCGCGACGTCTTATATTTAGGAATG 59.939 44.000 14.70 0.00 0.00 2.67
2288 4830 5.060569 CGCGACGTCTTATATTTAGGAATGG 59.939 44.000 14.70 0.00 0.00 3.16
2289 4831 6.154445 GCGACGTCTTATATTTAGGAATGGA 58.846 40.000 14.70 0.00 0.00 3.41
2290 4832 6.308282 GCGACGTCTTATATTTAGGAATGGAG 59.692 42.308 14.70 0.00 0.00 3.86
2291 4833 6.807230 CGACGTCTTATATTTAGGAATGGAGG 59.193 42.308 14.70 0.00 0.00 4.30
2292 4834 7.523380 CGACGTCTTATATTTAGGAATGGAGGT 60.523 40.741 14.70 0.00 0.00 3.85
2294 4836 8.804204 ACGTCTTATATTTAGGAATGGAGGTAG 58.196 37.037 0.00 0.00 0.00 3.18
2303 4845 4.104831 AGGAATGGAGGTAGTACTTGCTT 58.895 43.478 0.00 0.00 0.00 3.91
2325 4867 3.620488 TGATCATGCCCTGTTCTTTACC 58.380 45.455 0.00 0.00 0.00 2.85
2326 4868 3.266772 TGATCATGCCCTGTTCTTTACCT 59.733 43.478 0.00 0.00 0.00 3.08
2327 4869 3.806949 TCATGCCCTGTTCTTTACCTT 57.193 42.857 0.00 0.00 0.00 3.50
2328 4870 4.919774 TCATGCCCTGTTCTTTACCTTA 57.080 40.909 0.00 0.00 0.00 2.69
2329 4871 5.249780 TCATGCCCTGTTCTTTACCTTAA 57.750 39.130 0.00 0.00 0.00 1.85
2331 4873 6.964464 TCATGCCCTGTTCTTTACCTTAATA 58.036 36.000 0.00 0.00 0.00 0.98
2404 4956 0.610174 AGCGACAGAGATGCAAAGGA 59.390 50.000 0.00 0.00 0.00 3.36
2407 4959 2.159599 GCGACAGAGATGCAAAGGAAAG 60.160 50.000 0.00 0.00 0.00 2.62
2422 4974 8.825745 TGCAAAGGAAAGAAACAAAATTATGTC 58.174 29.630 0.00 0.00 31.81 3.06
2423 4975 8.825745 GCAAAGGAAAGAAACAAAATTATGTCA 58.174 29.630 0.00 0.00 31.81 3.58
2427 4979 8.912988 AGGAAAGAAACAAAATTATGTCAGACA 58.087 29.630 5.50 5.50 31.81 3.41
2434 5041 8.524870 AACAAAATTATGTCAGACAATCTTGC 57.475 30.769 7.50 0.00 31.81 4.01
2439 5049 0.723981 GTCAGACAATCTTGCGCCTC 59.276 55.000 4.18 0.00 0.00 4.70
2451 5061 1.300697 GCGCCTCCTTACATACGGG 60.301 63.158 0.00 0.00 0.00 5.28
2470 5080 3.487372 GGGTTACCTGGCAATATCTTCC 58.513 50.000 0.00 0.00 0.00 3.46
2472 5082 2.543777 TACCTGGCAATATCTTCCGC 57.456 50.000 0.00 0.00 0.00 5.54
2489 5099 2.938253 CGCTTCTCGCAGCAAACA 59.062 55.556 0.00 0.00 40.09 2.83
2577 5385 9.098355 TGATGTATTCTACACTACAGAAAATGC 57.902 33.333 0.00 0.00 42.23 3.56
2605 5417 7.040201 TGAGGAGATCATTGAAAGTTTTTCCTG 60.040 37.037 0.00 0.00 31.84 3.86
2608 5420 3.976169 TCATTGAAAGTTTTTCCTGCGG 58.024 40.909 0.00 0.00 0.00 5.69
2617 5429 2.467566 TTTTCCTGCGGGAGTAACTC 57.532 50.000 15.42 0.00 43.29 3.01
2632 5444 5.814705 GGAGTAACTCTGTCATTTCAGATGG 59.185 44.000 0.00 0.00 42.47 3.51
2639 5451 8.311395 ACTCTGTCATTTCAGATGGAATACTA 57.689 34.615 0.00 0.00 42.47 1.82
2642 5454 9.958180 TCTGTCATTTCAGATGGAATACTAAAA 57.042 29.630 0.00 0.00 39.20 1.52
2671 5483 0.614812 TGTGCTCCAGCTTGCTCATA 59.385 50.000 0.00 0.00 42.66 2.15
2681 5495 4.514441 CCAGCTTGCTCATATTCCTTGTAG 59.486 45.833 0.00 0.00 0.00 2.74
2699 5513 5.934402 TGTAGACTAAAATGGAGGTCCTC 57.066 43.478 10.78 10.78 36.82 3.71
2710 5524 0.036858 GAGGTCCTCACCACAGAAGC 60.037 60.000 14.46 0.00 46.68 3.86
2734 5548 4.021104 TGCATAGTAGGCTTATCTGCGATT 60.021 41.667 8.45 0.00 0.00 3.34
2735 5549 4.932200 GCATAGTAGGCTTATCTGCGATTT 59.068 41.667 0.00 0.00 0.00 2.17
2736 5550 5.409826 GCATAGTAGGCTTATCTGCGATTTT 59.590 40.000 0.00 0.00 0.00 1.82
2737 5551 6.590292 GCATAGTAGGCTTATCTGCGATTTTA 59.410 38.462 0.00 0.00 0.00 1.52
2738 5552 7.278868 GCATAGTAGGCTTATCTGCGATTTTAT 59.721 37.037 0.00 0.00 0.00 1.40
2739 5553 9.155975 CATAGTAGGCTTATCTGCGATTTTATT 57.844 33.333 0.00 0.00 0.00 1.40
2740 5554 9.726438 ATAGTAGGCTTATCTGCGATTTTATTT 57.274 29.630 0.00 0.00 0.00 1.40
2741 5555 8.451908 AGTAGGCTTATCTGCGATTTTATTTT 57.548 30.769 0.00 0.00 0.00 1.82
2742 5556 9.555727 AGTAGGCTTATCTGCGATTTTATTTTA 57.444 29.630 0.00 0.00 0.00 1.52
2766 5580 7.973048 ATTTTTAGAAAAGGAGGATTACCCC 57.027 36.000 0.00 0.00 36.73 4.95
2767 5581 5.461516 TTTAGAAAAGGAGGATTACCCCC 57.538 43.478 0.00 0.00 36.73 5.40
2768 5582 1.844497 AGAAAAGGAGGATTACCCCCG 59.156 52.381 0.00 0.00 36.73 5.73
2769 5583 0.924090 AAAAGGAGGATTACCCCCGG 59.076 55.000 0.00 0.00 36.73 5.73
2770 5584 1.642513 AAAGGAGGATTACCCCCGGC 61.643 60.000 0.00 0.00 36.73 6.13
2771 5585 3.567209 GGAGGATTACCCCCGGCC 61.567 72.222 0.00 0.00 36.73 6.13
2772 5586 2.447959 GAGGATTACCCCCGGCCT 60.448 66.667 0.00 0.00 36.73 5.19
2773 5587 2.447959 AGGATTACCCCCGGCCTC 60.448 66.667 0.00 0.00 36.73 4.70
2774 5588 2.447959 GGATTACCCCCGGCCTCT 60.448 66.667 0.00 0.00 0.00 3.69
2775 5589 2.819284 GGATTACCCCCGGCCTCTG 61.819 68.421 0.00 0.00 0.00 3.35
2776 5590 3.477578 GATTACCCCCGGCCTCTGC 62.478 68.421 0.00 0.00 0.00 4.26
2778 5592 4.815973 TACCCCCGGCCTCTGCAT 62.816 66.667 0.00 0.00 40.13 3.96
2787 5601 3.721793 GCCTCTGCATGGCTTATCT 57.278 52.632 19.77 0.00 46.38 1.98
2788 5602 1.236628 GCCTCTGCATGGCTTATCTG 58.763 55.000 19.77 0.00 46.38 2.90
2789 5603 1.236628 CCTCTGCATGGCTTATCTGC 58.763 55.000 0.00 0.00 36.45 4.26
2790 5604 0.866427 CTCTGCATGGCTTATCTGCG 59.134 55.000 0.00 0.00 38.75 5.18
2791 5605 0.465287 TCTGCATGGCTTATCTGCGA 59.535 50.000 0.00 0.00 38.75 5.10
2792 5606 1.071228 TCTGCATGGCTTATCTGCGAT 59.929 47.619 0.00 0.00 38.75 4.58
2839 5653 3.929610 GACATTCAAGTCTCCTCTTTCCG 59.070 47.826 0.00 0.00 35.65 4.30
2898 5712 5.751243 TCTTTTTGTGAAGCTGAACTACC 57.249 39.130 0.00 0.00 0.00 3.18
3089 5912 9.425248 AGGTGAAATATCAATATCAACCATGTT 57.575 29.630 0.00 0.00 37.30 2.71
3111 5934 7.935520 TGTTTGAGTTCATTTAGCACACAATA 58.064 30.769 0.00 0.00 0.00 1.90
3112 5935 8.575589 TGTTTGAGTTCATTTAGCACACAATAT 58.424 29.630 0.00 0.00 0.00 1.28
3125 5948 4.005650 CACACAATATGACTGTTCCTGCT 58.994 43.478 0.00 0.00 0.00 4.24
3147 5971 6.183360 TGCTACAGACCTGAAGAAGATATGTC 60.183 42.308 3.76 0.00 0.00 3.06
3205 6042 2.671396 GCTACAACCACGGTGTATCTTG 59.329 50.000 7.45 5.64 0.00 3.02
3283 6120 5.682943 TCTTCATTTTTGTACAAGTCCCG 57.317 39.130 8.56 0.00 0.00 5.14
3288 6125 0.887387 TTTGTACAAGTCCCGCAGCC 60.887 55.000 8.56 0.00 0.00 4.85
3305 6142 4.979204 CGGAAGGTGTCGTAGCAA 57.021 55.556 0.00 0.00 0.00 3.91
3307 6144 0.736325 CGGAAGGTGTCGTAGCAAGG 60.736 60.000 0.00 0.00 0.00 3.61
3316 6153 0.320421 TCGTAGCAAGGCCTGTTGTC 60.320 55.000 5.69 0.00 0.00 3.18
3317 6154 0.602638 CGTAGCAAGGCCTGTTGTCA 60.603 55.000 5.69 0.00 0.00 3.58
3318 6155 1.604604 GTAGCAAGGCCTGTTGTCAA 58.395 50.000 5.69 0.00 0.00 3.18
3319 6156 2.162681 GTAGCAAGGCCTGTTGTCAAT 58.837 47.619 5.69 0.00 0.00 2.57
3320 6157 0.963962 AGCAAGGCCTGTTGTCAATG 59.036 50.000 5.69 0.00 0.00 2.82
3321 6158 0.668401 GCAAGGCCTGTTGTCAATGC 60.668 55.000 5.69 5.92 0.00 3.56
3322 6159 0.037975 CAAGGCCTGTTGTCAATGCC 60.038 55.000 5.69 13.13 40.01 4.40
3323 6160 1.526575 AAGGCCTGTTGTCAATGCCG 61.527 55.000 5.69 0.00 42.63 5.69
3324 6161 2.568090 GCCTGTTGTCAATGCCGG 59.432 61.111 0.00 0.00 0.00 6.13
3325 6162 2.268076 GCCTGTTGTCAATGCCGGT 61.268 57.895 1.90 0.00 0.00 5.28
3326 6163 1.580942 CCTGTTGTCAATGCCGGTG 59.419 57.895 1.90 0.00 0.00 4.94
3327 6164 1.081242 CTGTTGTCAATGCCGGTGC 60.081 57.895 1.90 0.00 38.26 5.01
3355 6208 0.912486 GTTAGGAGCCTCCACATGGT 59.088 55.000 14.46 0.00 39.61 3.55
3356 6209 1.282157 GTTAGGAGCCTCCACATGGTT 59.718 52.381 14.46 0.00 39.61 3.67
3357 6210 1.668826 TAGGAGCCTCCACATGGTTT 58.331 50.000 14.46 0.00 39.61 3.27
3358 6211 1.668826 AGGAGCCTCCACATGGTTTA 58.331 50.000 14.46 0.00 39.61 2.01
3359 6212 1.561542 AGGAGCCTCCACATGGTTTAG 59.438 52.381 14.46 0.00 39.61 1.85
3360 6213 1.383523 GAGCCTCCACATGGTTTAGC 58.616 55.000 0.00 0.00 36.34 3.09
3366 6225 1.098050 CCACATGGTTTAGCTCAGCC 58.902 55.000 0.00 0.00 0.00 4.85
3397 6257 6.983906 TTGCCTGAGATAGAATAGACATGA 57.016 37.500 0.00 0.00 0.00 3.07
3398 6258 6.587206 TGCCTGAGATAGAATAGACATGAG 57.413 41.667 0.00 0.00 0.00 2.90
3399 6259 6.310149 TGCCTGAGATAGAATAGACATGAGA 58.690 40.000 0.00 0.00 0.00 3.27
3410 6270 2.470990 AGACATGAGATGTACCTGCCA 58.529 47.619 0.00 0.00 45.03 4.92
3414 6274 2.543037 TGAGATGTACCTGCCACCTA 57.457 50.000 0.00 0.00 0.00 3.08
3417 6277 3.235200 GAGATGTACCTGCCACCTATCT 58.765 50.000 0.00 0.00 0.00 1.98
3422 6282 1.123928 ACCTGCCACCTATCTGCTAC 58.876 55.000 0.00 0.00 0.00 3.58
3432 6292 5.106634 CCACCTATCTGCTACGTACATAGAC 60.107 48.000 0.00 0.00 0.00 2.59
3439 6299 2.031314 GCTACGTACATAGACGCTGTGA 59.969 50.000 0.00 0.00 46.87 3.58
3440 6300 3.486375 GCTACGTACATAGACGCTGTGAA 60.486 47.826 0.00 0.00 46.87 3.18
3441 6301 3.564235 ACGTACATAGACGCTGTGAAA 57.436 42.857 9.76 0.00 46.87 2.69
3442 6302 4.106029 ACGTACATAGACGCTGTGAAAT 57.894 40.909 9.76 0.00 46.87 2.17
3443 6303 3.857665 ACGTACATAGACGCTGTGAAATG 59.142 43.478 9.76 0.00 46.87 2.32
3444 6304 3.242944 CGTACATAGACGCTGTGAAATGG 59.757 47.826 9.76 0.00 35.79 3.16
3445 6305 2.632377 ACATAGACGCTGTGAAATGGG 58.368 47.619 9.76 0.00 0.00 4.00
3446 6306 1.331756 CATAGACGCTGTGAAATGGGC 59.668 52.381 0.00 0.00 0.00 5.36
3447 6307 0.323302 TAGACGCTGTGAAATGGGCA 59.677 50.000 0.00 0.00 0.00 5.36
3453 6320 2.769893 GCTGTGAAATGGGCAAATTGT 58.230 42.857 0.00 0.00 0.00 2.71
3572 6439 2.292267 GGTCAAGGCATCATCGTCATT 58.708 47.619 0.00 0.00 0.00 2.57
3664 6531 5.590663 TCGAGTAATTGATGTAGAGCAGTCT 59.409 40.000 0.00 0.00 36.75 3.24
3678 6545 6.047511 AGAGCAGTCTAAACATTCATGTCT 57.952 37.500 0.00 0.00 40.80 3.41
3697 6564 8.300286 TCATGTCTTTGTGTGTTTTCTTTGTAA 58.700 29.630 0.00 0.00 0.00 2.41
3698 6565 8.586273 CATGTCTTTGTGTGTTTTCTTTGTAAG 58.414 33.333 0.00 0.00 0.00 2.34
3699 6566 7.653647 TGTCTTTGTGTGTTTTCTTTGTAAGT 58.346 30.769 0.00 0.00 0.00 2.24
3700 6567 8.138712 TGTCTTTGTGTGTTTTCTTTGTAAGTT 58.861 29.630 0.00 0.00 0.00 2.66
3701 6568 8.974408 GTCTTTGTGTGTTTTCTTTGTAAGTTT 58.026 29.630 0.00 0.00 0.00 2.66
3702 6569 9.535878 TCTTTGTGTGTTTTCTTTGTAAGTTTT 57.464 25.926 0.00 0.00 0.00 2.43
3741 6608 7.984050 CAGAATTGTAGACAACTCTCCACATAT 59.016 37.037 3.49 0.00 40.02 1.78
3742 6609 9.201989 AGAATTGTAGACAACTCTCCACATATA 57.798 33.333 0.66 0.00 37.87 0.86
3743 6610 9.250624 GAATTGTAGACAACTCTCCACATATAC 57.749 37.037 0.00 0.00 38.86 1.47
3744 6611 7.956328 TTGTAGACAACTCTCCACATATACT 57.044 36.000 0.00 0.00 0.00 2.12
3745 6612 7.569639 TGTAGACAACTCTCCACATATACTC 57.430 40.000 0.00 0.00 0.00 2.59
3746 6613 6.546403 TGTAGACAACTCTCCACATATACTCC 59.454 42.308 0.00 0.00 0.00 3.85
3747 6614 4.896482 AGACAACTCTCCACATATACTCCC 59.104 45.833 0.00 0.00 0.00 4.30
3748 6615 4.884961 ACAACTCTCCACATATACTCCCT 58.115 43.478 0.00 0.00 0.00 4.20
3749 6616 4.896482 ACAACTCTCCACATATACTCCCTC 59.104 45.833 0.00 0.00 0.00 4.30
3750 6617 5.144100 CAACTCTCCACATATACTCCCTCT 58.856 45.833 0.00 0.00 0.00 3.69
3751 6618 4.735369 ACTCTCCACATATACTCCCTCTG 58.265 47.826 0.00 0.00 0.00 3.35
3752 6619 4.169068 ACTCTCCACATATACTCCCTCTGT 59.831 45.833 0.00 0.00 0.00 3.41
3753 6620 5.372959 ACTCTCCACATATACTCCCTCTGTA 59.627 44.000 0.00 0.00 0.00 2.74
3754 6621 6.126156 ACTCTCCACATATACTCCCTCTGTAA 60.126 42.308 0.00 0.00 0.00 2.41
3755 6622 6.679542 TCTCCACATATACTCCCTCTGTAAA 58.320 40.000 0.00 0.00 0.00 2.01
3756 6623 6.778069 TCTCCACATATACTCCCTCTGTAAAG 59.222 42.308 0.00 0.00 0.00 1.85
3757 6624 6.679542 TCCACATATACTCCCTCTGTAAAGA 58.320 40.000 0.00 0.00 0.00 2.52
3758 6625 7.130099 TCCACATATACTCCCTCTGTAAAGAA 58.870 38.462 0.00 0.00 0.00 2.52
3759 6626 7.622081 TCCACATATACTCCCTCTGTAAAGAAA 59.378 37.037 0.00 0.00 0.00 2.52
3760 6627 8.432805 CCACATATACTCCCTCTGTAAAGAAAT 58.567 37.037 0.00 0.00 0.00 2.17
3768 6635 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
3769 6636 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
3770 6637 7.069578 TCCCTCTGTAAAGAAATATAAGAGCGT 59.930 37.037 0.00 0.00 0.00 5.07
3771 6638 7.711339 CCCTCTGTAAAGAAATATAAGAGCGTT 59.289 37.037 0.00 0.00 0.00 4.84
3772 6639 9.099454 CCTCTGTAAAGAAATATAAGAGCGTTT 57.901 33.333 0.00 0.00 0.00 3.60
3781 6648 9.685828 AGAAATATAAGAGCGTTTAGATCACTC 57.314 33.333 0.00 0.00 37.82 3.51
3782 6649 9.685828 GAAATATAAGAGCGTTTAGATCACTCT 57.314 33.333 0.00 0.00 39.34 3.24
3783 6650 9.685828 AAATATAAGAGCGTTTAGATCACTCTC 57.314 33.333 0.00 0.00 36.72 3.20
3784 6651 4.379339 AAGAGCGTTTAGATCACTCTCC 57.621 45.455 0.00 0.00 36.72 3.71
3785 6652 3.357203 AGAGCGTTTAGATCACTCTCCA 58.643 45.455 0.00 0.00 37.82 3.86
3786 6653 3.129638 AGAGCGTTTAGATCACTCTCCAC 59.870 47.826 0.00 0.00 37.82 4.02
3787 6654 2.826128 AGCGTTTAGATCACTCTCCACA 59.174 45.455 0.00 0.00 32.66 4.17
3788 6655 3.449018 AGCGTTTAGATCACTCTCCACAT 59.551 43.478 0.00 0.00 32.66 3.21
3789 6656 4.645136 AGCGTTTAGATCACTCTCCACATA 59.355 41.667 0.00 0.00 32.66 2.29
3790 6657 5.303078 AGCGTTTAGATCACTCTCCACATAT 59.697 40.000 0.00 0.00 32.66 1.78
3791 6658 6.490381 AGCGTTTAGATCACTCTCCACATATA 59.510 38.462 0.00 0.00 32.66 0.86
3792 6659 6.583050 GCGTTTAGATCACTCTCCACATATAC 59.417 42.308 0.00 0.00 32.66 1.47
3793 6660 7.522399 GCGTTTAGATCACTCTCCACATATACT 60.522 40.741 0.00 0.00 32.66 2.12
3794 6661 9.000486 CGTTTAGATCACTCTCCACATATACTA 58.000 37.037 0.00 0.00 32.66 1.82
3801 6668 9.869667 ATCACTCTCCACATATACTACTTTAGT 57.130 33.333 0.00 0.00 42.68 2.24
3802 6669 9.121658 TCACTCTCCACATATACTACTTTAGTG 57.878 37.037 0.00 0.00 39.81 2.74
3803 6670 9.121658 CACTCTCCACATATACTACTTTAGTGA 57.878 37.037 0.00 0.00 39.81 3.41
3804 6671 9.869667 ACTCTCCACATATACTACTTTAGTGAT 57.130 33.333 0.00 0.00 39.81 3.06
3815 6682 7.393841 ACTACTTTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 40.05 4.09
3816 6683 7.474190 ACTACTTTAGTGATCTAAACGCTCTC 58.526 38.462 0.00 0.00 40.05 3.20
3817 6684 6.268825 ACTTTAGTGATCTAAACGCTCTCA 57.731 37.500 0.00 0.00 40.05 3.27
3818 6685 6.868622 ACTTTAGTGATCTAAACGCTCTCAT 58.131 36.000 0.00 0.00 40.05 2.90
3819 6686 7.997482 ACTTTAGTGATCTAAACGCTCTCATA 58.003 34.615 0.00 0.00 40.05 2.15
3820 6687 8.634444 ACTTTAGTGATCTAAACGCTCTCATAT 58.366 33.333 0.00 0.00 40.05 1.78
3821 6688 9.469807 CTTTAGTGATCTAAACGCTCTCATATT 57.530 33.333 0.00 0.00 40.05 1.28
3822 6689 9.817809 TTTAGTGATCTAAACGCTCTCATATTT 57.182 29.630 0.00 0.00 40.05 1.40
3823 6690 7.938563 AGTGATCTAAACGCTCTCATATTTC 57.061 36.000 0.00 0.00 0.00 2.17
3824 6691 7.721402 AGTGATCTAAACGCTCTCATATTTCT 58.279 34.615 0.00 0.00 0.00 2.52
3825 6692 8.200792 AGTGATCTAAACGCTCTCATATTTCTT 58.799 33.333 0.00 0.00 0.00 2.52
3826 6693 8.821894 GTGATCTAAACGCTCTCATATTTCTTT 58.178 33.333 0.00 0.00 0.00 2.52
3829 6696 8.336498 TCTAAACGCTCTCATATTTCTTTACG 57.664 34.615 0.00 0.00 0.00 3.18
3830 6697 5.968387 AACGCTCTCATATTTCTTTACGG 57.032 39.130 0.00 0.00 0.00 4.02
3831 6698 5.258456 ACGCTCTCATATTTCTTTACGGA 57.742 39.130 0.00 0.00 0.00 4.69
3832 6699 5.282510 ACGCTCTCATATTTCTTTACGGAG 58.717 41.667 0.00 0.00 0.00 4.63
3833 6700 4.681942 CGCTCTCATATTTCTTTACGGAGG 59.318 45.833 0.00 0.00 0.00 4.30
3834 6701 4.991687 GCTCTCATATTTCTTTACGGAGGG 59.008 45.833 0.00 0.00 0.00 4.30
3835 6702 5.221461 GCTCTCATATTTCTTTACGGAGGGA 60.221 44.000 0.00 0.00 0.00 4.20
3836 6703 6.406692 TCTCATATTTCTTTACGGAGGGAG 57.593 41.667 0.00 0.00 0.00 4.30
3848 6715 8.596293 TCTTTACGGAGGGAGTAATTCTTTAAA 58.404 33.333 0.00 0.00 34.50 1.52
3850 6717 5.494724 ACGGAGGGAGTAATTCTTTAAACC 58.505 41.667 0.00 0.00 0.00 3.27
3873 6741 7.125391 ACCCACAAGATTATTCATTGGTACAT 58.875 34.615 0.00 0.00 39.30 2.29
3891 6759 5.888161 GGTACATCATTCCCTTGTCATTTCT 59.112 40.000 0.00 0.00 0.00 2.52
3971 6841 2.840038 TGGGCCAGAATATGCGAGATAT 59.160 45.455 0.00 0.00 0.00 1.63
4049 6919 0.946221 CAGGTGGAGCACTGTTCGAC 60.946 60.000 0.16 0.16 34.40 4.20
4121 6991 3.131933 AGGAGATCAAGAATGGTCGTCTG 59.868 47.826 0.00 0.00 41.80 3.51
4224 7094 0.605319 GGATCCACTCCGCAACAACA 60.605 55.000 6.95 0.00 33.29 3.33
4238 7108 4.503910 GCAACAACATTTTATCCCCCTTC 58.496 43.478 0.00 0.00 0.00 3.46
4246 7116 5.222547 ACATTTTATCCCCCTTCCTTTGAGT 60.223 40.000 0.00 0.00 0.00 3.41
4251 7121 2.721906 TCCCCCTTCCTTTGAGTCATTT 59.278 45.455 0.00 0.00 0.00 2.32
4275 7145 7.795482 TTAACTGCTTATGTATGGCGTTTAT 57.205 32.000 0.00 0.00 0.00 1.40
4290 7312 7.851387 TGGCGTTTATATTGATCAGTTTGTA 57.149 32.000 0.00 0.00 0.00 2.41
4332 7396 3.132467 AGTTAGCAAATACTCCTCCGTCC 59.868 47.826 0.00 0.00 0.00 4.79
4349 7413 4.157289 TCCGTCCCATAATATAAGAGCGTC 59.843 45.833 0.00 0.00 0.00 5.19
4353 7417 6.645415 CGTCCCATAATATAAGAGCGTCTTTT 59.355 38.462 5.74 2.08 37.89 2.27
4355 7419 9.654663 GTCCCATAATATAAGAGCGTCTTTTAT 57.345 33.333 5.74 6.69 37.89 1.40
4367 7431 8.954950 AGAGCGTCTTTTATACTACACTAGTA 57.045 34.615 0.00 0.00 44.64 1.82
4416 7480 2.357323 GAGGGAGTAGGTTACTGCGTAC 59.643 54.545 3.51 0.00 46.63 3.67
4429 7500 3.454375 ACTGCGTACACATGGCTATAAC 58.546 45.455 0.00 0.00 0.00 1.89
4432 7503 4.055360 TGCGTACACATGGCTATAACATC 58.945 43.478 0.00 0.00 0.00 3.06
4457 7528 4.890088 TGTACAGTTGTGGAGTTATGGTC 58.110 43.478 0.00 0.00 0.00 4.02
4553 7647 4.629200 CAGGTGAAGAGCAGATACTTTGAC 59.371 45.833 0.00 0.00 0.00 3.18
4556 7650 3.509967 TGAAGAGCAGATACTTTGACGGA 59.490 43.478 0.00 0.00 0.00 4.69
4586 7680 2.590007 GCAGATGCAGTAGGGGCG 60.590 66.667 0.00 0.00 41.59 6.13
4587 7681 2.903357 CAGATGCAGTAGGGGCGT 59.097 61.111 0.00 0.00 0.00 5.68
4588 7682 1.522355 CAGATGCAGTAGGGGCGTG 60.522 63.158 0.00 0.00 0.00 5.34
4589 7683 1.990060 AGATGCAGTAGGGGCGTGT 60.990 57.895 0.00 0.00 0.00 4.49
4590 7684 1.078426 GATGCAGTAGGGGCGTGTT 60.078 57.895 0.00 0.00 0.00 3.32
4591 7685 0.676782 GATGCAGTAGGGGCGTGTTT 60.677 55.000 0.00 0.00 0.00 2.83
4592 7686 0.960364 ATGCAGTAGGGGCGTGTTTG 60.960 55.000 0.00 0.00 0.00 2.93
4593 7687 2.332654 GCAGTAGGGGCGTGTTTGG 61.333 63.158 0.00 0.00 0.00 3.28
4594 7688 1.373435 CAGTAGGGGCGTGTTTGGA 59.627 57.895 0.00 0.00 0.00 3.53
4595 7689 0.035439 CAGTAGGGGCGTGTTTGGAT 60.035 55.000 0.00 0.00 0.00 3.41
4596 7690 0.035439 AGTAGGGGCGTGTTTGGATG 60.035 55.000 0.00 0.00 0.00 3.51
4597 7691 1.377987 TAGGGGCGTGTTTGGATGC 60.378 57.895 0.00 0.00 0.00 3.91
4598 7692 2.130821 TAGGGGCGTGTTTGGATGCA 62.131 55.000 0.00 0.00 0.00 3.96
4599 7693 2.568090 GGGCGTGTTTGGATGCAG 59.432 61.111 0.00 0.00 0.00 4.41
4600 7694 1.971167 GGGCGTGTTTGGATGCAGA 60.971 57.895 0.00 0.00 0.00 4.26
4601 7695 1.315257 GGGCGTGTTTGGATGCAGAT 61.315 55.000 0.00 0.00 0.00 2.90
4602 7696 0.179156 GGCGTGTTTGGATGCAGATG 60.179 55.000 0.00 0.00 0.00 2.90
4603 7697 0.799534 GCGTGTTTGGATGCAGATGC 60.800 55.000 0.00 0.00 42.50 3.91
4635 7729 4.303282 GTGTTTGGTTACATTGCCGATTT 58.697 39.130 0.00 0.00 0.00 2.17
4739 7835 0.731417 CTGCATGCTCCTAGTTGCAC 59.269 55.000 20.33 0.01 42.26 4.57
4759 7855 4.733523 GCACGAGACAAACATTTTTGACCT 60.734 41.667 11.21 7.36 44.38 3.85
4900 7997 8.801882 AATATAGTGCCAGCTAGTTAAACAAA 57.198 30.769 0.00 0.00 0.00 2.83
4904 8001 5.711976 AGTGCCAGCTAGTTAAACAAATGAT 59.288 36.000 0.00 0.00 0.00 2.45
4909 8006 8.244113 GCCAGCTAGTTAAACAAATGATAGTTT 58.756 33.333 0.00 0.00 40.68 2.66
5013 8128 4.285517 TCATCTTCCTCTTCTGCTTCTGTT 59.714 41.667 0.00 0.00 0.00 3.16
5014 8129 4.000331 TCTTCCTCTTCTGCTTCTGTTG 58.000 45.455 0.00 0.00 0.00 3.33
5015 8130 3.389329 TCTTCCTCTTCTGCTTCTGTTGT 59.611 43.478 0.00 0.00 0.00 3.32
5022 8137 0.318445 CTGCTTCTGTTGTTGCTGCC 60.318 55.000 0.00 0.00 0.00 4.85
5047 8162 5.337169 GCTGCTTCTTCTTCCTCTTCTTCTA 60.337 44.000 0.00 0.00 0.00 2.10
5099 8214 3.777106 TCTTCAAATCCTGCACTGACT 57.223 42.857 0.00 0.00 0.00 3.41
5144 8260 4.079672 TCCCACTCCAACCTTTTGTTCTTA 60.080 41.667 0.00 0.00 34.00 2.10
5162 8278 5.412526 TCTTACAACCGTCATTGTCAAAC 57.587 39.130 0.72 0.00 41.89 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 6.005583 ACATGATATAAAAAGCATCCGCAG 57.994 37.500 0.00 0.00 42.27 5.18
35 36 6.089685 GGAACAAACTTCGTTGCTTTGTTTTA 59.910 34.615 10.79 0.00 44.34 1.52
50 51 2.752903 GTGTGACACAGGGAACAAACTT 59.247 45.455 11.43 0.00 34.08 2.66
59 60 2.029380 TCTAACATCGTGTGACACAGGG 60.029 50.000 23.97 13.04 34.95 4.45
68 69 4.630069 GGTGTAGCAATTCTAACATCGTGT 59.370 41.667 0.00 0.00 0.00 4.49
150 151 2.095008 TGTTTTTCTGTGCGTTTGCTCA 60.095 40.909 0.00 0.00 41.92 4.26
229 230 5.366768 CCATTAAGACAATACTCCCTCTGGA 59.633 44.000 0.00 0.00 38.75 3.86
407 408 6.427547 ACCAACAAATCAACCAATGCATAAAG 59.572 34.615 0.00 0.00 0.00 1.85
434 436 4.600547 AGGATGGGATGAAATCTAGCATCA 59.399 41.667 9.42 3.25 44.71 3.07
466 469 6.540914 GGTTTTATCGAAGGTGGATGTAATGA 59.459 38.462 0.00 0.00 0.00 2.57
467 470 6.542370 AGGTTTTATCGAAGGTGGATGTAATG 59.458 38.462 0.00 0.00 0.00 1.90
482 485 6.352526 CGGACATTTATCGAAGGTTTTATCG 58.647 40.000 0.00 0.00 40.31 2.92
483 486 6.259387 ACCGGACATTTATCGAAGGTTTTATC 59.741 38.462 9.46 0.00 31.36 1.75
484 487 6.037830 CACCGGACATTTATCGAAGGTTTTAT 59.962 38.462 9.46 0.00 31.36 1.40
485 488 5.352016 CACCGGACATTTATCGAAGGTTTTA 59.648 40.000 9.46 0.00 31.36 1.52
486 489 4.155280 CACCGGACATTTATCGAAGGTTTT 59.845 41.667 9.46 0.00 31.36 2.43
487 490 3.687698 CACCGGACATTTATCGAAGGTTT 59.312 43.478 9.46 0.00 31.36 3.27
488 491 3.267483 CACCGGACATTTATCGAAGGTT 58.733 45.455 9.46 0.00 31.36 3.50
506 509 1.468914 GAATTTCCGCTTCCAGACACC 59.531 52.381 0.00 0.00 0.00 4.16
642 645 1.598676 GCAGCATATCGTCCGTCGTAA 60.599 52.381 0.00 0.00 40.80 3.18
645 648 1.271446 CTGCAGCATATCGTCCGTCG 61.271 60.000 0.00 0.00 41.41 5.12
646 649 0.249073 ACTGCAGCATATCGTCCGTC 60.249 55.000 15.27 0.00 0.00 4.79
653 656 4.627611 AAACATGACACTGCAGCATATC 57.372 40.909 15.27 6.89 0.00 1.63
722 966 1.036481 TGTGCCACACATGTTGCAGT 61.036 50.000 10.76 0.00 45.49 4.40
772 1016 6.345723 CCTTTAAAAACAGCATACGTTTGCAG 60.346 38.462 28.58 23.78 45.23 4.41
785 1029 5.406477 GCAGCAGGAAATCCTTTAAAAACAG 59.594 40.000 0.00 0.00 46.09 3.16
786 1030 5.163364 TGCAGCAGGAAATCCTTTAAAAACA 60.163 36.000 0.00 0.00 46.09 2.83
787 1031 5.296748 TGCAGCAGGAAATCCTTTAAAAAC 58.703 37.500 0.00 0.00 46.09 2.43
792 1046 2.487762 CGTTGCAGCAGGAAATCCTTTA 59.512 45.455 0.00 0.00 46.09 1.85
865 1119 2.829384 GGAGGGACAACACCAGCCA 61.829 63.158 0.00 0.00 0.00 4.75
868 1122 1.847968 AGGGGAGGGACAACACCAG 60.848 63.158 0.00 0.00 33.30 4.00
892 1146 3.544285 GTCACGAGCTACTGAGATTTTCG 59.456 47.826 0.00 0.00 0.00 3.46
923 3249 4.612412 GGAACCGTGGACGTGGCA 62.612 66.667 0.00 0.00 37.74 4.92
932 3258 1.446272 GCTCGAGGAAGGAACCGTG 60.446 63.158 15.58 0.00 34.73 4.94
939 3265 2.615912 GGAATGAAATGCTCGAGGAAGG 59.384 50.000 11.77 0.00 0.00 3.46
1251 3577 3.461773 GCCTACCTGGAGCTGCGA 61.462 66.667 0.00 0.00 38.35 5.10
1272 3598 1.004277 TGGCTTTTGTAAGGAGGCGAT 59.996 47.619 0.00 0.00 38.66 4.58
1275 3601 1.067565 GCTTGGCTTTTGTAAGGAGGC 60.068 52.381 0.00 0.00 36.59 4.70
1291 3618 3.141398 AGCATACAATATCCACGGCTTG 58.859 45.455 0.00 0.00 0.00 4.01
1301 3628 9.929180 ACGAGAACATACATAAGCATACAATAT 57.071 29.630 0.00 0.00 0.00 1.28
1302 3629 9.406828 GACGAGAACATACATAAGCATACAATA 57.593 33.333 0.00 0.00 0.00 1.90
1303 3630 7.926018 TGACGAGAACATACATAAGCATACAAT 59.074 33.333 0.00 0.00 0.00 2.71
1304 3631 7.262048 TGACGAGAACATACATAAGCATACAA 58.738 34.615 0.00 0.00 0.00 2.41
1306 3633 7.694388 TTGACGAGAACATACATAAGCATAC 57.306 36.000 0.00 0.00 0.00 2.39
1307 3634 8.887036 AATTGACGAGAACATACATAAGCATA 57.113 30.769 0.00 0.00 0.00 3.14
1308 3635 7.712639 AGAATTGACGAGAACATACATAAGCAT 59.287 33.333 0.00 0.00 0.00 3.79
1310 3637 7.306866 GGAGAATTGACGAGAACATACATAAGC 60.307 40.741 0.00 0.00 0.00 3.09
1311 3638 7.096436 CGGAGAATTGACGAGAACATACATAAG 60.096 40.741 0.00 0.00 0.00 1.73
1312 3639 6.695713 CGGAGAATTGACGAGAACATACATAA 59.304 38.462 0.00 0.00 0.00 1.90
1313 3640 6.183360 ACGGAGAATTGACGAGAACATACATA 60.183 38.462 0.00 0.00 0.00 2.29
1314 3641 5.043903 CGGAGAATTGACGAGAACATACAT 58.956 41.667 0.00 0.00 0.00 2.29
1315 3642 4.082408 ACGGAGAATTGACGAGAACATACA 60.082 41.667 0.00 0.00 0.00 2.29
1316 3643 4.421948 ACGGAGAATTGACGAGAACATAC 58.578 43.478 0.00 0.00 0.00 2.39
1317 3644 4.713824 ACGGAGAATTGACGAGAACATA 57.286 40.909 0.00 0.00 0.00 2.29
1318 3645 3.594603 ACGGAGAATTGACGAGAACAT 57.405 42.857 0.00 0.00 0.00 2.71
1319 3646 3.380479 AACGGAGAATTGACGAGAACA 57.620 42.857 0.00 0.00 0.00 3.18
1320 3647 4.483311 ACTAACGGAGAATTGACGAGAAC 58.517 43.478 0.00 0.00 0.00 3.01
1321 3648 4.778534 ACTAACGGAGAATTGACGAGAA 57.221 40.909 0.00 0.00 0.00 2.87
1322 3649 4.778534 AACTAACGGAGAATTGACGAGA 57.221 40.909 0.00 0.00 0.00 4.04
1323 3650 4.684703 ACAAACTAACGGAGAATTGACGAG 59.315 41.667 12.86 0.00 32.97 4.18
1324 3651 4.446385 CACAAACTAACGGAGAATTGACGA 59.554 41.667 12.86 0.00 32.97 4.20
1325 3652 4.698276 CACAAACTAACGGAGAATTGACG 58.302 43.478 12.86 0.00 32.97 4.35
1326 3653 4.464112 GCACAAACTAACGGAGAATTGAC 58.536 43.478 12.86 5.34 32.97 3.18
1327 3654 3.185594 CGCACAAACTAACGGAGAATTGA 59.814 43.478 12.86 0.00 32.97 2.57
1328 3655 3.185594 TCGCACAAACTAACGGAGAATTG 59.814 43.478 0.00 0.00 34.08 2.32
1329 3656 3.395639 TCGCACAAACTAACGGAGAATT 58.604 40.909 0.00 0.00 0.00 2.17
1330 3657 3.034721 TCGCACAAACTAACGGAGAAT 57.965 42.857 0.00 0.00 0.00 2.40
1331 3658 2.512485 TCGCACAAACTAACGGAGAA 57.488 45.000 0.00 0.00 0.00 2.87
1332 3659 2.512485 TTCGCACAAACTAACGGAGA 57.488 45.000 0.00 0.00 0.00 3.71
1333 3660 2.734606 TCATTCGCACAAACTAACGGAG 59.265 45.455 0.00 0.00 0.00 4.63
1334 3661 2.756829 TCATTCGCACAAACTAACGGA 58.243 42.857 0.00 0.00 0.00 4.69
1335 3662 3.059188 AGTTCATTCGCACAAACTAACGG 60.059 43.478 0.00 0.00 30.47 4.44
1336 3663 3.900116 CAGTTCATTCGCACAAACTAACG 59.100 43.478 0.00 0.00 31.06 3.18
1337 3664 3.664025 GCAGTTCATTCGCACAAACTAAC 59.336 43.478 0.00 0.00 31.06 2.34
1338 3665 3.313803 TGCAGTTCATTCGCACAAACTAA 59.686 39.130 0.00 0.00 31.06 2.24
1339 3666 2.875317 TGCAGTTCATTCGCACAAACTA 59.125 40.909 0.00 0.00 31.06 2.24
1340 3667 1.675483 TGCAGTTCATTCGCACAAACT 59.325 42.857 0.00 0.00 32.34 2.66
1341 3668 2.118228 TGCAGTTCATTCGCACAAAC 57.882 45.000 0.00 0.00 0.00 2.93
1346 3673 0.867746 GTCAGTGCAGTTCATTCGCA 59.132 50.000 0.00 0.00 0.00 5.10
1347 3674 0.166814 GGTCAGTGCAGTTCATTCGC 59.833 55.000 0.00 0.00 0.00 4.70
1348 3675 1.728971 GAGGTCAGTGCAGTTCATTCG 59.271 52.381 0.00 0.00 0.00 3.34
1349 3676 2.079925 GGAGGTCAGTGCAGTTCATTC 58.920 52.381 0.00 0.00 0.00 2.67
1350 3677 1.271597 GGGAGGTCAGTGCAGTTCATT 60.272 52.381 0.00 0.00 0.00 2.57
1351 3678 0.326264 GGGAGGTCAGTGCAGTTCAT 59.674 55.000 0.00 0.00 0.00 2.57
1352 3679 1.754745 GGGAGGTCAGTGCAGTTCA 59.245 57.895 0.00 0.00 0.00 3.18
1353 3680 1.374758 CGGGAGGTCAGTGCAGTTC 60.375 63.158 0.00 0.00 0.00 3.01
1354 3681 2.743718 CGGGAGGTCAGTGCAGTT 59.256 61.111 0.00 0.00 0.00 3.16
1377 3704 4.524328 AGCTTCAAACATAAGTTCCCCAAG 59.476 41.667 0.00 0.00 36.84 3.61
1391 3718 2.287970 CCCCGTACCAAAAGCTTCAAAC 60.288 50.000 0.00 0.00 0.00 2.93
1480 3810 0.040157 TATCGAACCCGTAATCGCCG 60.040 55.000 0.00 0.00 38.87 6.46
1688 4018 8.158169 TCTGCAAAATATAATCAGGCACTAAG 57.842 34.615 0.00 0.00 36.02 2.18
1702 4032 7.707893 GGCACAATTAGTTGATCTGCAAAATAT 59.292 33.333 4.81 0.00 36.88 1.28
1722 4052 3.147132 TCGGAAGAGCAGGCACAA 58.853 55.556 0.00 0.00 34.84 3.33
1738 4068 4.444449 CCCCCTAAGTGCCTAACAACTATC 60.444 50.000 0.00 0.00 0.00 2.08
1745 4078 1.153229 CGCCCCCTAAGTGCCTAAC 60.153 63.158 0.00 0.00 0.00 2.34
1763 4096 7.168302 CAGTAGTGTTCGGAGATTTGATCATAC 59.832 40.741 0.00 0.00 35.04 2.39
1856 4189 4.440826 ACGGGGCATATTACCATAAACA 57.559 40.909 0.00 0.00 0.00 2.83
1861 4194 5.056553 AGTAAAACGGGGCATATTACCAT 57.943 39.130 0.00 0.00 0.00 3.55
1864 4197 6.511605 CGGTAAAGTAAAACGGGGCATATTAC 60.512 42.308 0.00 0.00 0.00 1.89
1888 4223 3.117491 ACCTGGCATATCATCAAGACG 57.883 47.619 0.00 0.00 0.00 4.18
1965 4300 1.624336 TGAAAGGCTTGCAGCAAGAT 58.376 45.000 34.93 20.93 44.75 2.40
1983 4318 2.939103 CTCCCACGAAGCTAGGAAAATG 59.061 50.000 0.00 0.00 0.00 2.32
2006 4341 1.872388 TTCGATTCAACACGGAGCAA 58.128 45.000 0.00 0.00 0.00 3.91
2033 4370 3.492102 TCTGTAGGGCCAAAGCATATC 57.508 47.619 6.18 0.00 42.56 1.63
2046 4383 2.350498 CCGTTACGCCAAATTCTGTAGG 59.650 50.000 0.00 0.00 0.00 3.18
2061 4398 7.591006 TTTACTTTCATCTGATCACCGTTAC 57.409 36.000 0.00 0.00 0.00 2.50
2064 4401 5.995282 TGTTTTACTTTCATCTGATCACCGT 59.005 36.000 0.00 0.00 0.00 4.83
2065 4402 6.480524 TGTTTTACTTTCATCTGATCACCG 57.519 37.500 0.00 0.00 0.00 4.94
2108 4504 6.825721 AGGCCTAAACATCAAGATTAGAACTG 59.174 38.462 1.29 0.00 35.30 3.16
2184 4726 7.454225 GCTGTCTTATATTTAGGAATGGAGGT 58.546 38.462 0.00 0.00 0.00 3.85
2190 4732 4.929808 CCGCGCTGTCTTATATTTAGGAAT 59.070 41.667 5.56 0.00 0.00 3.01
2194 4736 3.057019 TGCCGCGCTGTCTTATATTTAG 58.943 45.455 5.56 0.00 0.00 1.85
2195 4737 3.057019 CTGCCGCGCTGTCTTATATTTA 58.943 45.455 5.56 0.00 0.00 1.40
2206 4748 2.535934 TAATTTAAACTGCCGCGCTG 57.464 45.000 5.56 0.00 0.00 5.18
2207 4749 3.057806 ACTTTAATTTAAACTGCCGCGCT 60.058 39.130 5.56 0.00 0.00 5.92
2208 4750 3.239254 ACTTTAATTTAAACTGCCGCGC 58.761 40.909 0.00 0.00 0.00 6.86
2209 4751 8.603983 TTAATACTTTAATTTAAACTGCCGCG 57.396 30.769 0.00 0.00 0.00 6.46
2220 4762 6.334989 GCGGGGCAGTTTAATACTTTAATTT 58.665 36.000 0.00 0.00 33.85 1.82
2224 4766 3.281158 GGCGGGGCAGTTTAATACTTTA 58.719 45.455 0.00 0.00 33.85 1.85
2225 4767 2.097036 GGCGGGGCAGTTTAATACTTT 58.903 47.619 0.00 0.00 33.85 2.66
2226 4768 1.758936 GGCGGGGCAGTTTAATACTT 58.241 50.000 0.00 0.00 33.85 2.24
2227 4769 0.463116 CGGCGGGGCAGTTTAATACT 60.463 55.000 0.00 0.00 37.68 2.12
2228 4770 0.745486 ACGGCGGGGCAGTTTAATAC 60.745 55.000 13.24 0.00 32.29 1.89
2229 4771 0.462403 GACGGCGGGGCAGTTTAATA 60.462 55.000 13.24 0.00 37.05 0.98
2230 4772 1.747745 GACGGCGGGGCAGTTTAAT 60.748 57.895 13.24 0.00 37.05 1.40
2231 4773 2.358984 GACGGCGGGGCAGTTTAA 60.359 61.111 13.24 0.00 37.05 1.52
2232 4774 1.543065 TAAGACGGCGGGGCAGTTTA 61.543 55.000 13.24 0.00 37.05 2.01
2234 4776 1.332144 TATAAGACGGCGGGGCAGTT 61.332 55.000 13.24 0.00 37.05 3.16
2237 4779 0.470766 AAATATAAGACGGCGGGGCA 59.529 50.000 13.24 0.00 0.00 5.36
2239 4781 4.212636 CAGTTTAAATATAAGACGGCGGGG 59.787 45.833 13.24 0.00 0.00 5.73
2241 4783 4.319261 GGCAGTTTAAATATAAGACGGCGG 60.319 45.833 13.24 0.00 33.26 6.13
2242 4784 4.607557 CGGCAGTTTAAATATAAGACGGCG 60.608 45.833 4.80 4.80 33.26 6.46
2244 4786 4.607557 CGCGGCAGTTTAAATATAAGACGG 60.608 45.833 0.00 0.00 0.00 4.79
2245 4787 4.207635 TCGCGGCAGTTTAAATATAAGACG 59.792 41.667 6.13 0.00 0.00 4.18
2246 4788 5.429615 GTCGCGGCAGTTTAAATATAAGAC 58.570 41.667 5.47 0.00 0.00 3.01
2247 4789 4.207635 CGTCGCGGCAGTTTAAATATAAGA 59.792 41.667 12.89 0.00 0.00 2.10
2248 4790 4.026310 ACGTCGCGGCAGTTTAAATATAAG 60.026 41.667 12.89 0.00 0.00 1.73
2249 4791 3.864583 ACGTCGCGGCAGTTTAAATATAA 59.135 39.130 12.89 0.00 0.00 0.98
2251 4793 2.273557 ACGTCGCGGCAGTTTAAATAT 58.726 42.857 12.89 0.00 0.00 1.28
2252 4794 1.655099 GACGTCGCGGCAGTTTAAATA 59.345 47.619 12.89 0.00 33.63 1.40
2254 4796 0.598158 AGACGTCGCGGCAGTTTAAA 60.598 50.000 12.89 0.00 37.34 1.52
2255 4797 0.598158 AAGACGTCGCGGCAGTTTAA 60.598 50.000 12.89 0.00 37.34 1.52
2256 4798 0.240678 TAAGACGTCGCGGCAGTTTA 59.759 50.000 12.89 2.38 37.34 2.01
2258 4800 0.452987 TATAAGACGTCGCGGCAGTT 59.547 50.000 12.89 2.61 37.34 3.16
2261 4803 2.212869 AAATATAAGACGTCGCGGCA 57.787 45.000 12.89 0.00 37.34 5.69
2262 4804 2.660236 CCTAAATATAAGACGTCGCGGC 59.340 50.000 10.46 1.93 33.59 6.53
2263 4805 4.151258 TCCTAAATATAAGACGTCGCGG 57.849 45.455 10.46 0.00 0.00 6.46
2264 4806 5.060569 CCATTCCTAAATATAAGACGTCGCG 59.939 44.000 10.46 0.00 0.00 5.87
2265 4807 6.154445 TCCATTCCTAAATATAAGACGTCGC 58.846 40.000 10.46 0.00 0.00 5.19
2266 4808 6.807230 CCTCCATTCCTAAATATAAGACGTCG 59.193 42.308 10.46 0.00 0.00 5.12
2267 4809 7.668492 ACCTCCATTCCTAAATATAAGACGTC 58.332 38.462 7.70 7.70 0.00 4.34
2268 4810 7.613551 ACCTCCATTCCTAAATATAAGACGT 57.386 36.000 0.00 0.00 0.00 4.34
2269 4811 8.804204 ACTACCTCCATTCCTAAATATAAGACG 58.196 37.037 0.00 0.00 0.00 4.18
2279 4821 5.278061 AGCAAGTACTACCTCCATTCCTAA 58.722 41.667 0.00 0.00 0.00 2.69
2280 4822 4.880164 AGCAAGTACTACCTCCATTCCTA 58.120 43.478 0.00 0.00 0.00 2.94
2282 4824 4.489306 AAGCAAGTACTACCTCCATTCC 57.511 45.455 0.00 0.00 0.00 3.01
2283 4825 5.488341 TCAAAGCAAGTACTACCTCCATTC 58.512 41.667 0.00 0.00 0.00 2.67
2284 4826 5.499004 TCAAAGCAAGTACTACCTCCATT 57.501 39.130 0.00 0.00 0.00 3.16
2286 4828 4.530553 TGATCAAAGCAAGTACTACCTCCA 59.469 41.667 0.00 0.00 0.00 3.86
2287 4829 5.086104 TGATCAAAGCAAGTACTACCTCC 57.914 43.478 0.00 0.00 0.00 4.30
2288 4830 5.007136 GCATGATCAAAGCAAGTACTACCTC 59.993 44.000 16.09 0.00 0.00 3.85
2289 4831 4.878397 GCATGATCAAAGCAAGTACTACCT 59.122 41.667 16.09 0.00 0.00 3.08
2290 4832 4.035675 GGCATGATCAAAGCAAGTACTACC 59.964 45.833 20.74 0.00 0.00 3.18
2291 4833 4.035675 GGGCATGATCAAAGCAAGTACTAC 59.964 45.833 20.74 0.00 0.00 2.73
2292 4834 4.080356 AGGGCATGATCAAAGCAAGTACTA 60.080 41.667 20.74 0.00 0.00 1.82
2294 4836 3.019564 AGGGCATGATCAAAGCAAGTAC 58.980 45.455 20.74 6.90 0.00 2.73
2303 4845 4.016444 GGTAAAGAACAGGGCATGATCAA 58.984 43.478 5.99 0.00 33.28 2.57
2387 4939 3.329386 TCTTTCCTTTGCATCTCTGTCG 58.671 45.455 0.00 0.00 0.00 4.35
2391 4943 6.469782 TTTGTTTCTTTCCTTTGCATCTCT 57.530 33.333 0.00 0.00 0.00 3.10
2422 4974 0.392193 AGGAGGCGCAAGATTGTCTG 60.392 55.000 10.83 0.00 43.02 3.51
2423 4975 0.326264 AAGGAGGCGCAAGATTGTCT 59.674 50.000 10.83 0.00 43.02 3.41
2427 4979 2.717639 ATGTAAGGAGGCGCAAGATT 57.282 45.000 10.83 0.52 43.02 2.40
2434 5041 0.462789 AACCCGTATGTAAGGAGGCG 59.537 55.000 0.00 0.00 0.00 5.52
2439 5049 2.484241 GCCAGGTAACCCGTATGTAAGG 60.484 54.545 0.00 0.00 35.12 2.69
2451 5061 2.548480 GCGGAAGATATTGCCAGGTAAC 59.452 50.000 0.00 0.00 0.00 2.50
2568 5376 6.039382 TCAATGATCTCCTCATGCATTTTCTG 59.961 38.462 0.00 0.00 44.03 3.02
2572 5380 6.380274 ACTTTCAATGATCTCCTCATGCATTT 59.620 34.615 0.00 0.00 44.03 2.32
2574 5382 5.446860 ACTTTCAATGATCTCCTCATGCAT 58.553 37.500 0.00 0.00 44.03 3.96
2577 5385 7.758528 GGAAAAACTTTCAATGATCTCCTCATG 59.241 37.037 0.00 0.00 44.03 3.07
2605 5417 2.674796 AATGACAGAGTTACTCCCGC 57.325 50.000 8.96 0.00 0.00 6.13
2648 5460 1.372623 GCAAGCTGGAGCACAAAGC 60.373 57.895 0.65 0.67 45.16 3.51
2652 5464 0.614812 TATGAGCAAGCTGGAGCACA 59.385 50.000 0.00 8.22 45.16 4.57
2655 5467 1.878734 GGAATATGAGCAAGCTGGAGC 59.121 52.381 0.00 0.00 42.49 4.70
2661 5473 5.363939 AGTCTACAAGGAATATGAGCAAGC 58.636 41.667 0.00 0.00 0.00 4.01
2663 5475 9.905713 ATTTTAGTCTACAAGGAATATGAGCAA 57.094 29.630 0.00 0.00 0.00 3.91
2671 5483 7.272144 ACCTCCATTTTAGTCTACAAGGAAT 57.728 36.000 0.00 0.00 0.00 3.01
2681 5495 3.263425 TGGTGAGGACCTCCATTTTAGTC 59.737 47.826 19.11 0.00 43.58 2.59
2699 5513 2.105006 ACTATGCAGCTTCTGTGGTG 57.895 50.000 0.00 0.00 38.35 4.17
2710 5524 3.057245 TCGCAGATAAGCCTACTATGCAG 60.057 47.826 0.00 0.00 32.58 4.41
2740 5554 9.483489 GGGGTAATCCTCCTTTTCTAAAAATAA 57.517 33.333 0.00 0.00 35.33 1.40
2742 5556 7.973048 GGGGTAATCCTCCTTTTCTAAAAAT 57.027 36.000 0.00 0.00 35.33 1.82
2755 5569 2.447959 AGGCCGGGGGTAATCCTC 60.448 66.667 2.18 0.00 35.33 3.71
2756 5570 2.447959 GAGGCCGGGGGTAATCCT 60.448 66.667 2.18 0.00 35.33 3.24
2757 5571 2.447959 AGAGGCCGGGGGTAATCC 60.448 66.667 2.18 0.00 0.00 3.01
2758 5572 2.829592 CAGAGGCCGGGGGTAATC 59.170 66.667 2.18 0.00 0.00 1.75
2759 5573 3.489513 GCAGAGGCCGGGGGTAAT 61.490 66.667 2.18 0.00 0.00 1.89
2761 5575 4.815973 ATGCAGAGGCCGGGGGTA 62.816 66.667 2.18 0.00 40.13 3.69
2770 5584 1.236628 GCAGATAAGCCATGCAGAGG 58.763 55.000 3.66 3.66 39.75 3.69
2771 5585 0.866427 CGCAGATAAGCCATGCAGAG 59.134 55.000 0.00 0.00 39.97 3.35
2772 5586 0.465287 TCGCAGATAAGCCATGCAGA 59.535 50.000 0.00 0.00 39.97 4.26
2773 5587 1.197036 CATCGCAGATAAGCCATGCAG 59.803 52.381 0.00 0.00 45.12 4.41
2774 5588 1.202675 TCATCGCAGATAAGCCATGCA 60.203 47.619 0.00 0.00 45.12 3.96
2775 5589 1.516161 TCATCGCAGATAAGCCATGC 58.484 50.000 0.00 0.00 45.12 4.06
2776 5590 3.749609 TCATTCATCGCAGATAAGCCATG 59.250 43.478 0.00 0.00 45.12 3.66
2777 5591 4.011966 TCATTCATCGCAGATAAGCCAT 57.988 40.909 0.00 0.00 45.12 4.40
2778 5592 3.473923 TCATTCATCGCAGATAAGCCA 57.526 42.857 0.00 0.00 45.12 4.75
2779 5593 6.674694 ATTATCATTCATCGCAGATAAGCC 57.325 37.500 0.00 0.00 45.12 4.35
2780 5594 7.493971 ACCTATTATCATTCATCGCAGATAAGC 59.506 37.037 0.00 0.00 45.12 3.09
2781 5595 8.939201 ACCTATTATCATTCATCGCAGATAAG 57.061 34.615 0.00 0.00 45.12 1.73
2782 5596 9.725019 AAACCTATTATCATTCATCGCAGATAA 57.275 29.630 0.00 0.00 45.12 1.75
2783 5597 9.154847 CAAACCTATTATCATTCATCGCAGATA 57.845 33.333 0.00 0.00 45.12 1.98
2784 5598 7.361542 GCAAACCTATTATCATTCATCGCAGAT 60.362 37.037 0.00 0.00 45.12 2.90
2785 5599 6.073058 GCAAACCTATTATCATTCATCGCAGA 60.073 38.462 0.00 0.00 45.75 4.26
2786 5600 6.072838 AGCAAACCTATTATCATTCATCGCAG 60.073 38.462 0.00 0.00 0.00 5.18
2787 5601 5.764686 AGCAAACCTATTATCATTCATCGCA 59.235 36.000 0.00 0.00 0.00 5.10
2788 5602 6.246420 AGCAAACCTATTATCATTCATCGC 57.754 37.500 0.00 0.00 0.00 4.58
2789 5603 7.864686 TCAAGCAAACCTATTATCATTCATCG 58.135 34.615 0.00 0.00 0.00 3.84
2790 5604 8.844244 ACTCAAGCAAACCTATTATCATTCATC 58.156 33.333 0.00 0.00 0.00 2.92
2791 5605 8.627403 CACTCAAGCAAACCTATTATCATTCAT 58.373 33.333 0.00 0.00 0.00 2.57
2792 5606 7.828717 TCACTCAAGCAAACCTATTATCATTCA 59.171 33.333 0.00 0.00 0.00 2.57
2873 5687 6.472486 GGTAGTTCAGCTTCACAAAAAGAAAC 59.528 38.462 0.00 0.00 0.00 2.78
2877 5691 5.066505 ACTGGTAGTTCAGCTTCACAAAAAG 59.933 40.000 0.00 0.00 38.26 2.27
2898 5712 8.954950 AAGATTGTTGGTGAGATAAGATACTG 57.045 34.615 0.00 0.00 0.00 2.74
3080 5895 6.144402 GTGCTAAATGAACTCAAACATGGTTG 59.856 38.462 17.74 17.74 0.00 3.77
3089 5912 8.236586 GTCATATTGTGTGCTAAATGAACTCAA 58.763 33.333 0.00 0.00 40.64 3.02
3111 5934 2.234908 GGTCTGTAGCAGGAACAGTCAT 59.765 50.000 3.40 0.00 43.88 3.06
3112 5935 1.618837 GGTCTGTAGCAGGAACAGTCA 59.381 52.381 3.40 0.00 43.88 3.41
3125 5948 9.290988 GATAGACATATCTTCTTCAGGTCTGTA 57.709 37.037 0.00 0.00 35.79 2.74
3147 5971 6.638096 TGATCTTGAGAGCTCTTCAGATAG 57.362 41.667 26.87 16.82 0.00 2.08
3225 6062 8.354426 CCTCCATTAGAGTTAGCTAAGAACTAC 58.646 40.741 6.38 0.00 41.47 2.73
3226 6063 7.014422 GCCTCCATTAGAGTTAGCTAAGAACTA 59.986 40.741 6.38 8.06 41.47 2.24
3227 6064 6.183360 GCCTCCATTAGAGTTAGCTAAGAACT 60.183 42.308 6.38 2.82 41.47 3.01
3283 6120 3.291101 TACGACACCTTCCGGCTGC 62.291 63.158 0.00 0.00 0.00 5.25
3288 6125 0.736325 CCTTGCTACGACACCTTCCG 60.736 60.000 0.00 0.00 0.00 4.30
3298 6135 0.602638 TGACAACAGGCCTTGCTACG 60.603 55.000 0.00 0.00 0.00 3.51
3305 6142 1.973281 CGGCATTGACAACAGGCCT 60.973 57.895 19.37 0.00 42.27 5.19
3307 6144 2.268076 ACCGGCATTGACAACAGGC 61.268 57.895 0.00 6.09 0.00 4.85
3316 6153 2.360949 TTTGTGTGGCACCGGCATTG 62.361 55.000 16.26 0.00 43.71 2.82
3317 6154 2.086251 CTTTGTGTGGCACCGGCATT 62.086 55.000 16.26 0.00 43.71 3.56
3318 6155 2.520500 TTTGTGTGGCACCGGCAT 60.521 55.556 16.26 0.00 43.71 4.40
3319 6156 3.215568 CTTTGTGTGGCACCGGCA 61.216 61.111 16.26 8.79 43.71 5.69
3320 6157 1.448922 TAACTTTGTGTGGCACCGGC 61.449 55.000 16.26 6.10 40.13 6.13
3321 6158 0.591170 CTAACTTTGTGTGGCACCGG 59.409 55.000 16.26 0.00 32.73 5.28
3322 6159 0.591170 CCTAACTTTGTGTGGCACCG 59.409 55.000 16.26 0.96 32.73 4.94
3323 6160 1.880027 CTCCTAACTTTGTGTGGCACC 59.120 52.381 16.26 7.17 32.73 5.01
3324 6161 1.266989 GCTCCTAACTTTGTGTGGCAC 59.733 52.381 11.55 11.55 34.56 5.01
3325 6162 1.604604 GCTCCTAACTTTGTGTGGCA 58.395 50.000 0.00 0.00 0.00 4.92
3326 6163 0.881796 GGCTCCTAACTTTGTGTGGC 59.118 55.000 0.00 0.00 0.00 5.01
3327 6164 2.427506 GAGGCTCCTAACTTTGTGTGG 58.572 52.381 2.15 0.00 0.00 4.17
3355 6208 4.501400 GGCAAAGAAAAAGGCTGAGCTAAA 60.501 41.667 3.72 0.00 0.00 1.85
3356 6209 3.005791 GGCAAAGAAAAAGGCTGAGCTAA 59.994 43.478 3.72 0.00 0.00 3.09
3357 6210 2.558359 GGCAAAGAAAAAGGCTGAGCTA 59.442 45.455 3.72 0.00 0.00 3.32
3358 6211 1.342496 GGCAAAGAAAAAGGCTGAGCT 59.658 47.619 3.72 0.00 0.00 4.09
3359 6212 1.342496 AGGCAAAGAAAAAGGCTGAGC 59.658 47.619 0.00 0.00 36.75 4.26
3366 6225 9.388506 TCTATTCTATCTCAGGCAAAGAAAAAG 57.611 33.333 0.00 0.00 30.56 2.27
3397 6257 2.968574 CAGATAGGTGGCAGGTACATCT 59.031 50.000 0.00 0.00 33.13 2.90
3398 6258 2.548920 GCAGATAGGTGGCAGGTACATC 60.549 54.545 0.00 0.00 0.00 3.06
3399 6259 1.417890 GCAGATAGGTGGCAGGTACAT 59.582 52.381 0.00 0.00 0.00 2.29
3404 6264 0.032678 CGTAGCAGATAGGTGGCAGG 59.967 60.000 0.00 0.00 0.00 4.85
3410 6270 4.689812 CGTCTATGTACGTAGCAGATAGGT 59.310 45.833 16.06 0.00 38.07 3.08
3414 6274 3.058846 CAGCGTCTATGTACGTAGCAGAT 60.059 47.826 16.06 8.89 44.64 2.90
3417 6277 2.011947 ACAGCGTCTATGTACGTAGCA 58.988 47.619 16.06 0.00 44.64 3.49
3422 6282 3.242944 CCATTTCACAGCGTCTATGTACG 59.757 47.826 0.00 0.00 45.58 3.67
3432 6292 1.727880 CAATTTGCCCATTTCACAGCG 59.272 47.619 0.00 0.00 0.00 5.18
3474 6341 3.270877 CCAACTCGTTAGCTAAAGCCAT 58.729 45.455 13.83 0.24 43.38 4.40
3572 6439 3.084039 CAAAAGGGCTTGACAGATAGCA 58.916 45.455 0.34 0.00 39.15 3.49
3657 6524 6.488006 ACAAAGACATGAATGTTTAGACTGCT 59.512 34.615 0.00 0.00 41.95 4.24
3664 6531 8.994429 AAAACACACAAAGACATGAATGTTTA 57.006 26.923 0.00 0.00 41.95 2.01
3678 6545 9.099454 ACAAAACTTACAAAGAAAACACACAAA 57.901 25.926 0.00 0.00 0.00 2.83
3742 6609 8.425703 GCTCTTATATTTCTTTACAGAGGGAGT 58.574 37.037 0.00 0.00 0.00 3.85
3743 6610 7.596995 CGCTCTTATATTTCTTTACAGAGGGAG 59.403 40.741 4.76 0.00 40.49 4.30
3744 6611 7.069578 ACGCTCTTATATTTCTTTACAGAGGGA 59.930 37.037 14.96 0.00 40.49 4.20
3745 6612 7.210873 ACGCTCTTATATTTCTTTACAGAGGG 58.789 38.462 8.36 8.36 42.53 4.30
3746 6613 8.649973 AACGCTCTTATATTTCTTTACAGAGG 57.350 34.615 0.00 0.00 0.00 3.69
3755 6622 9.685828 GAGTGATCTAAACGCTCTTATATTTCT 57.314 33.333 0.00 0.00 40.40 2.52
3765 6632 3.119459 TGTGGAGAGTGATCTAAACGCTC 60.119 47.826 6.81 6.81 41.92 5.03
3766 6633 2.826128 TGTGGAGAGTGATCTAAACGCT 59.174 45.455 0.00 0.00 0.00 5.07
3767 6634 3.232213 TGTGGAGAGTGATCTAAACGC 57.768 47.619 0.00 0.00 0.00 4.84
3768 6635 7.877003 AGTATATGTGGAGAGTGATCTAAACG 58.123 38.462 0.00 0.00 0.00 3.60
3775 6642 9.869667 ACTAAAGTAGTATATGTGGAGAGTGAT 57.130 33.333 0.00 0.00 37.23 3.06
3776 6643 9.121658 CACTAAAGTAGTATATGTGGAGAGTGA 57.878 37.037 0.00 0.00 37.23 3.41
3777 6644 9.121658 TCACTAAAGTAGTATATGTGGAGAGTG 57.878 37.037 0.00 0.00 37.23 3.51
3778 6645 9.869667 ATCACTAAAGTAGTATATGTGGAGAGT 57.130 33.333 0.00 0.00 37.23 3.24
3789 6656 9.122779 AGAGCGTTTAGATCACTAAAGTAGTAT 57.877 33.333 0.00 0.00 45.42 2.12
3790 6657 8.503458 AGAGCGTTTAGATCACTAAAGTAGTA 57.497 34.615 0.00 0.00 45.42 1.82
3791 6658 7.120873 TGAGAGCGTTTAGATCACTAAAGTAGT 59.879 37.037 0.00 0.00 45.42 2.73
3792 6659 7.473366 TGAGAGCGTTTAGATCACTAAAGTAG 58.527 38.462 0.00 0.00 45.42 2.57
3793 6660 7.387119 TGAGAGCGTTTAGATCACTAAAGTA 57.613 36.000 0.00 0.00 45.42 2.24
3794 6661 6.268825 TGAGAGCGTTTAGATCACTAAAGT 57.731 37.500 0.00 0.00 45.42 2.66
3795 6662 9.469807 AATATGAGAGCGTTTAGATCACTAAAG 57.530 33.333 0.00 0.00 45.42 1.85
3796 6663 9.817809 AAATATGAGAGCGTTTAGATCACTAAA 57.182 29.630 0.00 0.00 43.52 1.85
3797 6664 9.464714 GAAATATGAGAGCGTTTAGATCACTAA 57.535 33.333 0.00 0.00 37.82 2.24
3798 6665 8.851145 AGAAATATGAGAGCGTTTAGATCACTA 58.149 33.333 0.00 0.00 37.82 2.74
3799 6666 7.721402 AGAAATATGAGAGCGTTTAGATCACT 58.279 34.615 0.00 0.00 37.82 3.41
3800 6667 7.938563 AGAAATATGAGAGCGTTTAGATCAC 57.061 36.000 0.00 0.00 37.82 3.06
3801 6668 8.948631 AAAGAAATATGAGAGCGTTTAGATCA 57.051 30.769 0.00 0.00 37.82 2.92
3803 6670 8.969267 CGTAAAGAAATATGAGAGCGTTTAGAT 58.031 33.333 0.00 0.00 0.00 1.98
3804 6671 7.434307 CCGTAAAGAAATATGAGAGCGTTTAGA 59.566 37.037 0.00 0.00 0.00 2.10
3805 6672 7.434307 TCCGTAAAGAAATATGAGAGCGTTTAG 59.566 37.037 0.00 0.00 0.00 1.85
3806 6673 7.259882 TCCGTAAAGAAATATGAGAGCGTTTA 58.740 34.615 0.00 0.00 0.00 2.01
3807 6674 6.103997 TCCGTAAAGAAATATGAGAGCGTTT 58.896 36.000 0.00 0.00 0.00 3.60
3808 6675 5.657474 TCCGTAAAGAAATATGAGAGCGTT 58.343 37.500 0.00 0.00 0.00 4.84
3809 6676 5.258456 TCCGTAAAGAAATATGAGAGCGT 57.742 39.130 0.00 0.00 0.00 5.07
3810 6677 4.681942 CCTCCGTAAAGAAATATGAGAGCG 59.318 45.833 0.00 0.00 0.00 5.03
3811 6678 4.991687 CCCTCCGTAAAGAAATATGAGAGC 59.008 45.833 0.00 0.00 0.00 4.09
3812 6679 6.041069 ACTCCCTCCGTAAAGAAATATGAGAG 59.959 42.308 0.00 0.00 0.00 3.20
3813 6680 5.897824 ACTCCCTCCGTAAAGAAATATGAGA 59.102 40.000 0.00 0.00 0.00 3.27
3814 6681 6.163135 ACTCCCTCCGTAAAGAAATATGAG 57.837 41.667 0.00 0.00 0.00 2.90
3815 6682 7.664552 TTACTCCCTCCGTAAAGAAATATGA 57.335 36.000 0.00 0.00 0.00 2.15
3816 6683 8.904099 AATTACTCCCTCCGTAAAGAAATATG 57.096 34.615 0.00 0.00 31.36 1.78
3817 6684 8.935741 AGAATTACTCCCTCCGTAAAGAAATAT 58.064 33.333 0.00 0.00 31.36 1.28
3818 6685 8.315220 AGAATTACTCCCTCCGTAAAGAAATA 57.685 34.615 0.00 0.00 31.36 1.40
3819 6686 7.196637 AGAATTACTCCCTCCGTAAAGAAAT 57.803 36.000 0.00 0.00 31.36 2.17
3820 6687 6.616237 AGAATTACTCCCTCCGTAAAGAAA 57.384 37.500 0.00 0.00 31.36 2.52
3821 6688 6.616237 AAGAATTACTCCCTCCGTAAAGAA 57.384 37.500 0.00 0.00 31.36 2.52
3822 6689 6.616237 AAAGAATTACTCCCTCCGTAAAGA 57.384 37.500 0.00 0.00 31.36 2.52
3823 6690 8.663025 GTTTAAAGAATTACTCCCTCCGTAAAG 58.337 37.037 0.00 0.00 31.36 1.85
3824 6691 7.607607 GGTTTAAAGAATTACTCCCTCCGTAAA 59.392 37.037 0.00 0.00 31.36 2.01
3825 6692 7.105588 GGTTTAAAGAATTACTCCCTCCGTAA 58.894 38.462 0.00 0.00 0.00 3.18
3826 6693 6.352137 GGGTTTAAAGAATTACTCCCTCCGTA 60.352 42.308 0.00 0.00 34.18 4.02
3827 6694 5.494724 GGTTTAAAGAATTACTCCCTCCGT 58.505 41.667 0.00 0.00 0.00 4.69
3828 6695 4.880120 GGGTTTAAAGAATTACTCCCTCCG 59.120 45.833 0.00 0.00 34.18 4.63
3829 6696 5.651139 GTGGGTTTAAAGAATTACTCCCTCC 59.349 44.000 7.53 0.00 36.19 4.30
3830 6697 6.243148 TGTGGGTTTAAAGAATTACTCCCTC 58.757 40.000 7.53 5.11 36.19 4.30
3831 6698 6.208840 TGTGGGTTTAAAGAATTACTCCCT 57.791 37.500 7.53 0.00 36.19 4.20
3832 6699 6.717997 TCTTGTGGGTTTAAAGAATTACTCCC 59.282 38.462 0.00 0.00 35.96 4.30
3833 6700 7.754851 TCTTGTGGGTTTAAAGAATTACTCC 57.245 36.000 0.00 0.00 0.00 3.85
3848 6715 6.489603 TGTACCAATGAATAATCTTGTGGGT 58.510 36.000 0.00 0.00 0.00 4.51
3850 6717 8.224389 TGATGTACCAATGAATAATCTTGTGG 57.776 34.615 0.00 0.00 0.00 4.17
3864 6731 5.191727 TGACAAGGGAATGATGTACCAAT 57.808 39.130 0.00 0.00 0.00 3.16
3873 6741 8.477419 AAAAGTAAGAAATGACAAGGGAATGA 57.523 30.769 0.00 0.00 0.00 2.57
3971 6841 2.016393 CTAGCGCCTCGATCCCACAA 62.016 60.000 2.29 0.00 0.00 3.33
4157 7027 2.750237 CCCTTGCCGGTTACAGCC 60.750 66.667 1.90 0.00 0.00 4.85
4224 7094 5.016245 TGACTCAAAGGAAGGGGGATAAAAT 59.984 40.000 0.00 0.00 0.00 1.82
4238 7108 8.299570 ACATAAGCAGTTAAAATGACTCAAAGG 58.700 33.333 0.00 0.00 0.00 3.11
4246 7116 6.317642 ACGCCATACATAAGCAGTTAAAATGA 59.682 34.615 0.00 0.00 0.00 2.57
4251 7121 7.795482 ATAAACGCCATACATAAGCAGTTAA 57.205 32.000 0.00 0.00 0.00 2.01
4266 7136 6.751514 ACAAACTGATCAATATAAACGCCA 57.248 33.333 0.00 0.00 0.00 5.69
4267 7137 7.916552 ACTACAAACTGATCAATATAAACGCC 58.083 34.615 0.00 0.00 0.00 5.68
4377 7441 7.348033 ACTCCCTCCGTCCTATAATATAAGAG 58.652 42.308 0.00 0.00 0.00 2.85
4389 7453 1.064091 GTAACCTACTCCCTCCGTCCT 60.064 57.143 0.00 0.00 0.00 3.85
4416 7480 5.522097 TGTACAACGATGTTATAGCCATGTG 59.478 40.000 2.83 0.00 41.05 3.21
4429 7500 3.390135 ACTCCACAACTGTACAACGATG 58.610 45.455 0.00 0.00 0.00 3.84
4432 7503 4.151689 CCATAACTCCACAACTGTACAACG 59.848 45.833 0.00 0.00 0.00 4.10
4457 7528 3.068590 ACCCACAATTTCTGCTGAACAAG 59.931 43.478 5.41 1.59 31.02 3.16
4553 7647 3.624326 TCTGCATGTCAAAACTTTCCG 57.376 42.857 0.00 0.00 0.00 4.30
4582 7676 1.315257 ATCTGCATCCAAACACGCCC 61.315 55.000 0.00 0.00 0.00 6.13
4583 7677 0.179156 CATCTGCATCCAAACACGCC 60.179 55.000 0.00 0.00 0.00 5.68
4584 7678 0.799534 GCATCTGCATCCAAACACGC 60.800 55.000 0.00 0.00 41.59 5.34
4585 7679 3.317608 GCATCTGCATCCAAACACG 57.682 52.632 0.00 0.00 41.59 4.49
4596 7690 2.590007 CGCCCCTACTGCATCTGC 60.590 66.667 0.00 0.00 42.50 4.26
4597 7691 1.522355 CACGCCCCTACTGCATCTG 60.522 63.158 0.00 0.00 0.00 2.90
4598 7692 1.553690 AACACGCCCCTACTGCATCT 61.554 55.000 0.00 0.00 0.00 2.90
4599 7693 0.676782 AAACACGCCCCTACTGCATC 60.677 55.000 0.00 0.00 0.00 3.91
4600 7694 0.960364 CAAACACGCCCCTACTGCAT 60.960 55.000 0.00 0.00 0.00 3.96
4601 7695 1.599518 CAAACACGCCCCTACTGCA 60.600 57.895 0.00 0.00 0.00 4.41
4602 7696 2.332654 CCAAACACGCCCCTACTGC 61.333 63.158 0.00 0.00 0.00 4.40
4603 7697 0.536460 AACCAAACACGCCCCTACTG 60.536 55.000 0.00 0.00 0.00 2.74
4604 7698 1.058284 TAACCAAACACGCCCCTACT 58.942 50.000 0.00 0.00 0.00 2.57
4605 7699 1.159285 GTAACCAAACACGCCCCTAC 58.841 55.000 0.00 0.00 0.00 3.18
4698 7793 3.694072 GGCAACCAAACTATGTGCATCTA 59.306 43.478 0.00 0.00 33.79 1.98
4739 7835 5.147162 GCTAGGTCAAAAATGTTTGTCTCG 58.853 41.667 8.22 5.33 43.90 4.04
4950 8047 6.331572 TGAACTATCCCCTATTTAGCCAATGA 59.668 38.462 0.00 0.00 0.00 2.57
5022 8137 1.999024 GAAGAGGAAGAAGAAGCAGCG 59.001 52.381 0.00 0.00 0.00 5.18
5047 8162 0.894184 AACAGCAGCAGCAGAAGCAT 60.894 50.000 3.17 0.00 45.49 3.79
5144 8260 1.268335 GCGTTTGACAATGACGGTTGT 60.268 47.619 12.87 3.26 44.53 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.