Multiple sequence alignment - TraesCS5A01G177200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G177200 chr5A 100.000 3402 0 0 1 3402 374626820 374630221 0.000000e+00 6283.0
1 TraesCS5A01G177200 chr5A 91.515 165 10 4 18 179 343955494 343955657 1.230000e-54 224.0
2 TraesCS5A01G177200 chr5A 96.491 57 2 0 1408 1464 374628178 374628234 1.010000e-15 95.3
3 TraesCS5A01G177200 chr5A 96.491 57 2 0 1359 1415 374628227 374628283 1.010000e-15 95.3
4 TraesCS5A01G177200 chr3A 90.958 2035 121 25 1415 3402 644924544 644926562 0.000000e+00 2680.0
5 TraesCS5A01G177200 chr3A 98.413 189 2 1 1184 1371 487476874 487477062 7.040000e-87 331.0
6 TraesCS5A01G177200 chr3A 95.161 62 3 0 3341 3402 644926556 644926617 7.770000e-17 99.0
7 TraesCS5A01G177200 chr6D 90.757 2034 122 26 1415 3402 360612024 360614037 0.000000e+00 2654.0
8 TraesCS5A01G177200 chr6D 88.024 167 17 1 19 182 315172634 315172800 9.630000e-46 195.0
9 TraesCS5A01G177200 chr6B 88.448 831 90 5 1421 2248 268295198 268294371 0.000000e+00 998.0
10 TraesCS5A01G177200 chr6B 87.281 684 62 12 526 1186 286753186 286752505 0.000000e+00 758.0
11 TraesCS5A01G177200 chr6B 88.454 511 43 5 1421 1922 286752514 286752011 1.350000e-168 603.0
12 TraesCS5A01G177200 chr6B 90.521 422 27 8 1916 2336 286751179 286750770 2.310000e-151 545.0
13 TraesCS5A01G177200 chr6B 88.921 343 27 3 203 536 286753662 286753322 2.440000e-111 412.0
14 TraesCS5A01G177200 chr6B 83.267 251 22 11 2539 2784 286736426 286736191 2.660000e-51 213.0
15 TraesCS5A01G177200 chr6B 92.593 81 5 1 536 615 268306909 268306829 7.710000e-22 115.0
16 TraesCS5A01G177200 chr7A 88.771 659 64 7 535 1186 531743269 531742614 0.000000e+00 798.0
17 TraesCS5A01G177200 chr2B 83.524 437 64 6 595 1024 330069397 330069832 5.290000e-108 401.0
18 TraesCS5A01G177200 chr2B 79.048 210 26 8 1564 1757 350290214 350290421 9.910000e-26 128.0
19 TraesCS5A01G177200 chr1A 80.769 546 63 28 1415 1942 33113435 33112914 4.120000e-104 388.0
20 TraesCS5A01G177200 chr7B 82.759 435 66 7 595 1022 729325075 729325507 2.480000e-101 379.0
21 TraesCS5A01G177200 chr7B 94.301 193 11 0 1179 1371 15508053 15508245 2.570000e-76 296.0
22 TraesCS5A01G177200 chr3D 82.420 438 65 10 595 1024 354653467 354653900 4.150000e-99 372.0
23 TraesCS5A01G177200 chr4A 81.839 435 71 6 595 1022 732402508 732402941 3.230000e-95 359.0
24 TraesCS5A01G177200 chr4A 100.000 187 0 0 1185 1371 534540489 534540675 2.510000e-91 346.0
25 TraesCS5A01G177200 chrUn 96.316 190 7 0 1182 1371 16707033 16706844 2.550000e-81 313.0
26 TraesCS5A01G177200 chrUn 96.316 190 7 0 1182 1371 16724990 16724801 2.550000e-81 313.0
27 TraesCS5A01G177200 chrUn 96.316 190 7 0 1182 1371 305386063 305386252 2.550000e-81 313.0
28 TraesCS5A01G177200 chr1B 96.316 190 7 0 1182 1371 583458844 583459033 2.550000e-81 313.0
29 TraesCS5A01G177200 chr1B 95.833 192 8 0 1184 1375 531195049 531194858 9.170000e-81 311.0
30 TraesCS5A01G177200 chr1B 95.288 191 9 0 1181 1371 500908827 500909017 1.530000e-78 303.0
31 TraesCS5A01G177200 chr1B 87.405 262 25 7 1914 2173 381506112 381506367 9.230000e-76 294.0
32 TraesCS5A01G177200 chr3B 89.535 172 15 1 19 187 415480962 415481133 7.390000e-52 215.0
33 TraesCS5A01G177200 chr3B 80.676 207 21 12 1569 1760 780604513 780604715 3.540000e-30 143.0
34 TraesCS5A01G177200 chr4B 81.517 211 18 12 1565 1760 304866211 304866415 1.630000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G177200 chr5A 374626820 374630221 3401 False 2157.866667 6283 97.660667 1 3402 3 chr5A.!!$F2 3401
1 TraesCS5A01G177200 chr3A 644924544 644926617 2073 False 1389.500000 2680 93.059500 1415 3402 2 chr3A.!!$F2 1987
2 TraesCS5A01G177200 chr6D 360612024 360614037 2013 False 2654.000000 2654 90.757000 1415 3402 1 chr6D.!!$F2 1987
3 TraesCS5A01G177200 chr6B 268294371 268295198 827 True 998.000000 998 88.448000 1421 2248 1 chr6B.!!$R1 827
4 TraesCS5A01G177200 chr6B 286750770 286753662 2892 True 579.500000 758 88.794250 203 2336 4 chr6B.!!$R4 2133
5 TraesCS5A01G177200 chr7A 531742614 531743269 655 True 798.000000 798 88.771000 535 1186 1 chr7A.!!$R1 651
6 TraesCS5A01G177200 chr1A 33112914 33113435 521 True 388.000000 388 80.769000 1415 1942 1 chr1A.!!$R1 527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
88 89 0.036199 TGTATTTTACCGGCCACGCT 60.036 50.0 0.0 0.0 39.22 5.07 F
1181 1358 0.036164 ACTTACGCTCCACCAATGCA 59.964 50.0 0.0 0.0 0.00 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1385 1562 0.034337 TACCCACGCAGTTGAACCTC 59.966 55.0 0.00 0.0 41.61 3.85 R
2886 3958 0.311165 CCGGTAGATGAGACGCGATT 59.689 55.0 15.93 0.0 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.549615 ACAATTTAGGTAAGAGATTTACGCC 57.450 36.000 0.00 0.00 0.00 5.68
25 26 6.541278 ACAATTTAGGTAAGAGATTTACGCCC 59.459 38.462 0.00 0.00 0.00 6.13
26 27 4.677673 TTAGGTAAGAGATTTACGCCCC 57.322 45.455 0.00 0.00 0.00 5.80
27 28 1.411612 AGGTAAGAGATTTACGCCCCG 59.588 52.381 0.00 0.00 0.00 5.73
28 29 1.215244 GTAAGAGATTTACGCCCCGC 58.785 55.000 0.00 0.00 0.00 6.13
29 30 1.117150 TAAGAGATTTACGCCCCGCT 58.883 50.000 0.00 0.00 0.00 5.52
30 31 0.252197 AAGAGATTTACGCCCCGCTT 59.748 50.000 0.00 0.00 0.00 4.68
31 32 0.462047 AGAGATTTACGCCCCGCTTG 60.462 55.000 0.00 0.00 0.00 4.01
32 33 1.436983 GAGATTTACGCCCCGCTTGG 61.437 60.000 0.00 0.00 0.00 3.61
33 34 1.450669 GATTTACGCCCCGCTTGGA 60.451 57.895 0.00 0.00 35.39 3.53
34 35 1.001887 ATTTACGCCCCGCTTGGAA 60.002 52.632 0.00 0.00 35.39 3.53
35 36 0.395173 ATTTACGCCCCGCTTGGAAT 60.395 50.000 0.00 0.00 35.39 3.01
36 37 1.027792 TTTACGCCCCGCTTGGAATC 61.028 55.000 0.00 0.00 35.39 2.52
37 38 3.726595 TACGCCCCGCTTGGAATCG 62.727 63.158 0.00 0.00 35.39 3.34
39 40 4.796495 GCCCCGCTTGGAATCGGT 62.796 66.667 1.36 0.00 43.87 4.69
40 41 2.824041 CCCCGCTTGGAATCGGTG 60.824 66.667 1.36 0.00 43.87 4.94
41 42 2.046314 CCCGCTTGGAATCGGTGT 60.046 61.111 1.36 0.00 43.87 4.16
42 43 1.219664 CCCGCTTGGAATCGGTGTA 59.780 57.895 1.36 0.00 43.87 2.90
43 44 0.179056 CCCGCTTGGAATCGGTGTAT 60.179 55.000 1.36 0.00 43.87 2.29
44 45 1.217882 CCGCTTGGAATCGGTGTATC 58.782 55.000 0.00 0.00 40.72 2.24
45 46 1.202533 CCGCTTGGAATCGGTGTATCT 60.203 52.381 0.00 0.00 40.72 1.98
46 47 2.035449 CCGCTTGGAATCGGTGTATCTA 59.965 50.000 0.00 0.00 40.72 1.98
47 48 3.306088 CCGCTTGGAATCGGTGTATCTAT 60.306 47.826 0.00 0.00 40.72 1.98
48 49 4.082408 CCGCTTGGAATCGGTGTATCTATA 60.082 45.833 0.00 0.00 40.72 1.31
49 50 5.394224 CCGCTTGGAATCGGTGTATCTATAT 60.394 44.000 0.00 0.00 40.72 0.86
50 51 5.744345 CGCTTGGAATCGGTGTATCTATATC 59.256 44.000 0.00 0.00 0.00 1.63
51 52 6.043411 GCTTGGAATCGGTGTATCTATATCC 58.957 44.000 0.00 0.00 0.00 2.59
52 53 6.127310 GCTTGGAATCGGTGTATCTATATCCT 60.127 42.308 0.00 0.00 0.00 3.24
53 54 6.775594 TGGAATCGGTGTATCTATATCCTG 57.224 41.667 0.00 0.00 0.00 3.86
54 55 6.253758 TGGAATCGGTGTATCTATATCCTGT 58.746 40.000 0.00 0.00 0.00 4.00
55 56 7.407729 TGGAATCGGTGTATCTATATCCTGTA 58.592 38.462 0.00 0.00 0.00 2.74
56 57 8.059461 TGGAATCGGTGTATCTATATCCTGTAT 58.941 37.037 0.00 0.00 0.00 2.29
57 58 8.915036 GGAATCGGTGTATCTATATCCTGTATT 58.085 37.037 0.00 0.00 0.00 1.89
82 83 9.623350 TTTATTTTACAAGTGTATTTTACCGGC 57.377 29.630 0.00 0.00 0.00 6.13
83 84 5.625921 TTTACAAGTGTATTTTACCGGCC 57.374 39.130 0.00 0.00 0.00 6.13
84 85 3.143211 ACAAGTGTATTTTACCGGCCA 57.857 42.857 0.00 0.00 0.00 5.36
85 86 2.815503 ACAAGTGTATTTTACCGGCCAC 59.184 45.455 0.00 0.00 0.00 5.01
86 87 1.729284 AGTGTATTTTACCGGCCACG 58.271 50.000 0.00 0.00 40.55 4.94
87 88 0.097499 GTGTATTTTACCGGCCACGC 59.903 55.000 0.00 0.00 39.22 5.34
88 89 0.036199 TGTATTTTACCGGCCACGCT 60.036 50.000 0.00 0.00 39.22 5.07
89 90 1.089112 GTATTTTACCGGCCACGCTT 58.911 50.000 0.00 0.00 39.22 4.68
90 91 1.088306 TATTTTACCGGCCACGCTTG 58.912 50.000 0.00 0.00 39.22 4.01
91 92 0.606944 ATTTTACCGGCCACGCTTGA 60.607 50.000 0.00 0.00 39.22 3.02
92 93 0.606944 TTTTACCGGCCACGCTTGAT 60.607 50.000 0.00 0.00 39.22 2.57
93 94 0.249676 TTTACCGGCCACGCTTGATA 59.750 50.000 0.00 0.00 39.22 2.15
94 95 0.249676 TTACCGGCCACGCTTGATAA 59.750 50.000 0.00 0.00 39.22 1.75
95 96 0.466543 TACCGGCCACGCTTGATAAT 59.533 50.000 0.00 0.00 39.22 1.28
96 97 0.814010 ACCGGCCACGCTTGATAATC 60.814 55.000 0.00 0.00 39.22 1.75
97 98 1.507141 CCGGCCACGCTTGATAATCC 61.507 60.000 2.24 0.00 39.22 3.01
98 99 0.813610 CGGCCACGCTTGATAATCCA 60.814 55.000 2.24 0.00 0.00 3.41
99 100 0.663153 GGCCACGCTTGATAATCCAC 59.337 55.000 0.00 0.00 0.00 4.02
100 101 0.663153 GCCACGCTTGATAATCCACC 59.337 55.000 0.00 0.00 0.00 4.61
101 102 1.747206 GCCACGCTTGATAATCCACCT 60.747 52.381 0.00 0.00 0.00 4.00
102 103 1.942657 CCACGCTTGATAATCCACCTG 59.057 52.381 0.00 0.00 0.00 4.00
103 104 1.942657 CACGCTTGATAATCCACCTGG 59.057 52.381 0.00 0.00 0.00 4.45
127 128 2.514458 AAAAAGATGGATGGAGGCGT 57.486 45.000 0.00 0.00 0.00 5.68
128 129 1.755179 AAAAGATGGATGGAGGCGTG 58.245 50.000 0.00 0.00 0.00 5.34
129 130 0.620556 AAAGATGGATGGAGGCGTGT 59.379 50.000 0.00 0.00 0.00 4.49
130 131 1.496060 AAGATGGATGGAGGCGTGTA 58.504 50.000 0.00 0.00 0.00 2.90
131 132 1.496060 AGATGGATGGAGGCGTGTAA 58.504 50.000 0.00 0.00 0.00 2.41
132 133 1.414181 AGATGGATGGAGGCGTGTAAG 59.586 52.381 0.00 0.00 0.00 2.34
133 134 1.139058 GATGGATGGAGGCGTGTAAGT 59.861 52.381 0.00 0.00 0.00 2.24
134 135 0.981183 TGGATGGAGGCGTGTAAGTT 59.019 50.000 0.00 0.00 0.00 2.66
135 136 1.349688 TGGATGGAGGCGTGTAAGTTT 59.650 47.619 0.00 0.00 0.00 2.66
136 137 2.224670 TGGATGGAGGCGTGTAAGTTTT 60.225 45.455 0.00 0.00 0.00 2.43
137 138 3.008157 TGGATGGAGGCGTGTAAGTTTTA 59.992 43.478 0.00 0.00 0.00 1.52
138 139 3.373130 GGATGGAGGCGTGTAAGTTTTAC 59.627 47.826 0.00 0.00 0.00 2.01
139 140 3.472283 TGGAGGCGTGTAAGTTTTACA 57.528 42.857 0.00 0.00 0.00 2.41
140 141 3.395639 TGGAGGCGTGTAAGTTTTACAG 58.604 45.455 2.12 0.00 0.00 2.74
141 142 2.740447 GGAGGCGTGTAAGTTTTACAGG 59.260 50.000 14.13 14.13 36.66 4.00
142 143 3.396560 GAGGCGTGTAAGTTTTACAGGT 58.603 45.455 17.65 4.76 36.17 4.00
143 144 3.135994 AGGCGTGTAAGTTTTACAGGTG 58.864 45.455 17.65 7.20 36.17 4.00
144 145 2.874086 GGCGTGTAAGTTTTACAGGTGT 59.126 45.455 17.65 0.00 36.17 4.16
145 146 4.057432 GGCGTGTAAGTTTTACAGGTGTA 58.943 43.478 17.65 0.00 36.17 2.90
146 147 4.692155 GGCGTGTAAGTTTTACAGGTGTAT 59.308 41.667 17.65 0.00 36.17 2.29
147 148 5.868801 GGCGTGTAAGTTTTACAGGTGTATA 59.131 40.000 17.65 0.00 36.17 1.47
148 149 6.035327 GGCGTGTAAGTTTTACAGGTGTATAG 59.965 42.308 17.65 1.28 36.17 1.31
149 150 6.454715 GCGTGTAAGTTTTACAGGTGTATAGC 60.455 42.308 17.65 5.72 36.17 2.97
150 151 6.237384 CGTGTAAGTTTTACAGGTGTATAGCG 60.237 42.308 11.48 2.57 0.00 4.26
151 152 5.577945 TGTAAGTTTTACAGGTGTATAGCGC 59.422 40.000 0.00 0.00 0.00 5.92
152 153 4.467198 AGTTTTACAGGTGTATAGCGCT 57.533 40.909 17.26 17.26 0.00 5.92
153 154 4.430908 AGTTTTACAGGTGTATAGCGCTC 58.569 43.478 16.34 0.00 0.00 5.03
154 155 4.159879 AGTTTTACAGGTGTATAGCGCTCT 59.840 41.667 16.34 6.94 0.00 4.09
155 156 3.710326 TTACAGGTGTATAGCGCTCTG 57.290 47.619 16.34 16.92 34.38 3.35
156 157 1.763968 ACAGGTGTATAGCGCTCTGA 58.236 50.000 23.56 4.65 33.30 3.27
157 158 2.100197 ACAGGTGTATAGCGCTCTGAA 58.900 47.619 23.56 4.27 33.30 3.02
158 159 2.496070 ACAGGTGTATAGCGCTCTGAAA 59.504 45.455 23.56 3.87 33.30 2.69
159 160 2.860735 CAGGTGTATAGCGCTCTGAAAC 59.139 50.000 16.34 5.44 31.80 2.78
160 161 1.852895 GGTGTATAGCGCTCTGAAACG 59.147 52.381 16.34 0.00 0.00 3.60
161 162 2.479049 GGTGTATAGCGCTCTGAAACGA 60.479 50.000 16.34 0.00 0.00 3.85
162 163 2.784380 GTGTATAGCGCTCTGAAACGAG 59.216 50.000 16.34 0.00 0.00 4.18
163 164 2.681344 TGTATAGCGCTCTGAAACGAGA 59.319 45.455 16.34 0.00 32.74 4.04
164 165 2.941453 ATAGCGCTCTGAAACGAGAA 57.059 45.000 16.34 0.00 32.74 2.87
165 166 2.941453 TAGCGCTCTGAAACGAGAAT 57.059 45.000 16.34 0.00 32.74 2.40
166 167 1.634702 AGCGCTCTGAAACGAGAATC 58.365 50.000 2.64 0.00 32.74 2.52
167 168 0.647925 GCGCTCTGAAACGAGAATCC 59.352 55.000 0.00 0.00 32.74 3.01
168 169 1.996292 CGCTCTGAAACGAGAATCCA 58.004 50.000 0.00 0.00 32.74 3.41
169 170 2.337583 CGCTCTGAAACGAGAATCCAA 58.662 47.619 0.00 0.00 32.74 3.53
170 171 2.932614 CGCTCTGAAACGAGAATCCAAT 59.067 45.455 0.00 0.00 32.74 3.16
171 172 3.000724 CGCTCTGAAACGAGAATCCAATC 59.999 47.826 0.00 0.00 32.74 2.67
172 173 3.935203 GCTCTGAAACGAGAATCCAATCA 59.065 43.478 0.00 0.00 32.74 2.57
173 174 4.033817 GCTCTGAAACGAGAATCCAATCAG 59.966 45.833 0.00 0.00 36.34 2.90
174 175 4.507710 TCTGAAACGAGAATCCAATCAGG 58.492 43.478 0.00 0.00 35.95 3.86
175 176 3.009723 TGAAACGAGAATCCAATCAGGC 58.990 45.455 0.00 0.00 37.29 4.85
176 177 2.044123 AACGAGAATCCAATCAGGCC 57.956 50.000 0.00 0.00 37.29 5.19
177 178 0.181350 ACGAGAATCCAATCAGGCCC 59.819 55.000 0.00 0.00 37.29 5.80
178 179 0.471617 CGAGAATCCAATCAGGCCCT 59.528 55.000 0.00 0.00 37.29 5.19
179 180 1.133976 CGAGAATCCAATCAGGCCCTT 60.134 52.381 0.00 0.00 37.29 3.95
180 181 2.104792 CGAGAATCCAATCAGGCCCTTA 59.895 50.000 0.00 0.00 37.29 2.69
181 182 3.749226 GAGAATCCAATCAGGCCCTTAG 58.251 50.000 0.00 0.00 37.29 2.18
182 183 3.392616 GAGAATCCAATCAGGCCCTTAGA 59.607 47.826 0.00 0.00 37.29 2.10
183 184 3.986134 AGAATCCAATCAGGCCCTTAGAT 59.014 43.478 0.00 0.00 37.29 1.98
184 185 4.418190 AGAATCCAATCAGGCCCTTAGATT 59.582 41.667 0.00 1.43 37.29 2.40
185 186 5.612688 AGAATCCAATCAGGCCCTTAGATTA 59.387 40.000 0.00 0.00 37.29 1.75
186 187 6.276568 AGAATCCAATCAGGCCCTTAGATTAT 59.723 38.462 0.00 0.00 37.29 1.28
187 188 5.930209 TCCAATCAGGCCCTTAGATTATT 57.070 39.130 0.00 0.00 37.29 1.40
188 189 6.279813 TCCAATCAGGCCCTTAGATTATTT 57.720 37.500 0.00 0.00 37.29 1.40
189 190 6.070656 TCCAATCAGGCCCTTAGATTATTTG 58.929 40.000 0.00 0.00 37.29 2.32
190 191 5.835280 CCAATCAGGCCCTTAGATTATTTGT 59.165 40.000 0.00 0.00 31.26 2.83
191 192 6.239120 CCAATCAGGCCCTTAGATTATTTGTG 60.239 42.308 0.00 0.00 31.26 3.33
192 193 5.450818 TCAGGCCCTTAGATTATTTGTGT 57.549 39.130 0.00 0.00 0.00 3.72
193 194 6.569127 TCAGGCCCTTAGATTATTTGTGTA 57.431 37.500 0.00 0.00 0.00 2.90
194 195 6.591935 TCAGGCCCTTAGATTATTTGTGTAG 58.408 40.000 0.00 0.00 0.00 2.74
195 196 5.765182 CAGGCCCTTAGATTATTTGTGTAGG 59.235 44.000 0.00 0.00 0.00 3.18
196 197 5.432060 AGGCCCTTAGATTATTTGTGTAGGT 59.568 40.000 0.00 0.00 0.00 3.08
197 198 6.069029 AGGCCCTTAGATTATTTGTGTAGGTT 60.069 38.462 0.00 0.00 0.00 3.50
198 199 7.128263 AGGCCCTTAGATTATTTGTGTAGGTTA 59.872 37.037 0.00 0.00 0.00 2.85
199 200 7.942894 GGCCCTTAGATTATTTGTGTAGGTTAT 59.057 37.037 0.00 0.00 0.00 1.89
200 201 9.350951 GCCCTTAGATTATTTGTGTAGGTTATT 57.649 33.333 0.00 0.00 0.00 1.40
254 255 2.558359 GGTGCAGCAATAAGTCTTGGTT 59.442 45.455 11.86 0.00 34.78 3.67
255 256 3.005791 GGTGCAGCAATAAGTCTTGGTTT 59.994 43.478 11.86 0.00 34.78 3.27
271 272 8.829612 AGTCTTGGTTTTATTTTGCATTTTGAG 58.170 29.630 0.00 0.00 0.00 3.02
283 284 9.979578 ATTTTGCATTTTGAGTACTGAATTACA 57.020 25.926 0.00 0.00 0.00 2.41
303 304 4.665212 ACAAAAGATATGATGCTTGCACG 58.335 39.130 0.00 0.00 0.00 5.34
358 359 6.480981 CACAAAAAGATTGAAACATTGCTCCT 59.519 34.615 0.00 0.00 0.00 3.69
382 383 1.211949 ACTGTGGTACCTGTTTGCTGT 59.788 47.619 14.36 4.14 0.00 4.40
383 384 1.603802 CTGTGGTACCTGTTTGCTGTG 59.396 52.381 14.36 0.00 0.00 3.66
385 386 2.158682 TGTGGTACCTGTTTGCTGTGAT 60.159 45.455 14.36 0.00 0.00 3.06
387 388 1.812571 GGTACCTGTTTGCTGTGATGG 59.187 52.381 4.06 0.00 0.00 3.51
388 389 2.552155 GGTACCTGTTTGCTGTGATGGA 60.552 50.000 4.06 0.00 0.00 3.41
389 390 2.363306 ACCTGTTTGCTGTGATGGAA 57.637 45.000 0.00 0.00 0.00 3.53
390 391 2.233271 ACCTGTTTGCTGTGATGGAAG 58.767 47.619 0.00 0.00 0.00 3.46
391 392 1.542915 CCTGTTTGCTGTGATGGAAGG 59.457 52.381 0.00 0.00 0.00 3.46
392 393 2.233271 CTGTTTGCTGTGATGGAAGGT 58.767 47.619 0.00 0.00 0.00 3.50
393 394 2.624838 CTGTTTGCTGTGATGGAAGGTT 59.375 45.455 0.00 0.00 0.00 3.50
394 395 3.820467 CTGTTTGCTGTGATGGAAGGTTA 59.180 43.478 0.00 0.00 0.00 2.85
395 396 3.568007 TGTTTGCTGTGATGGAAGGTTAC 59.432 43.478 0.00 0.00 0.00 2.50
396 397 2.093306 TGCTGTGATGGAAGGTTACG 57.907 50.000 0.00 0.00 0.00 3.18
430 440 8.733458 TCACTTATCACAGGAAAGAAATGATTG 58.267 33.333 0.00 0.00 32.42 2.67
479 489 3.052036 GCCACTGCAACACAATTTACAG 58.948 45.455 0.00 0.00 37.47 2.74
485 495 6.142798 CACTGCAACACAATTTACAGTTCATC 59.857 38.462 0.00 0.00 36.28 2.92
496 506 5.689383 TTACAGTTCATCAGTTTTGAGCC 57.311 39.130 0.00 0.00 36.61 4.70
504 514 5.003804 TCATCAGTTTTGAGCCTAAGTTCC 58.996 41.667 0.00 0.00 36.61 3.62
514 524 8.415950 TTTGAGCCTAAGTTCCATTTTATTGA 57.584 30.769 0.00 0.00 0.00 2.57
557 711 0.037303 TTGGCTTGCCTCTTCCTCTG 59.963 55.000 13.18 0.00 0.00 3.35
588 742 6.885918 TGATTTCCTTCAGATTACTTGCATCA 59.114 34.615 0.00 0.00 0.00 3.07
606 760 8.984891 TTGCATCATAAATTTCAAGGTTACAG 57.015 30.769 0.00 0.00 0.00 2.74
615 769 4.574674 TTCAAGGTTACAGATCTGGCAT 57.425 40.909 26.08 11.03 34.19 4.40
626 780 4.196971 CAGATCTGGCATTGAATGAGACA 58.803 43.478 15.38 3.64 0.00 3.41
628 782 5.299531 CAGATCTGGCATTGAATGAGACAAT 59.700 40.000 15.38 0.00 38.30 2.71
733 887 5.556382 CGTGCGCTCTGTAAATAAATGTAGG 60.556 44.000 9.73 0.00 0.00 3.18
762 917 9.394767 ACTGTCACAATATTGATTAGTGCAATA 57.605 29.630 22.16 0.00 41.06 1.90
879 1043 7.332003 TGCGTTGCTTTTTATAACTCAATTG 57.668 32.000 0.00 0.00 0.00 2.32
918 1082 5.487433 AGTATTAAAACAAAATGGCCTGCC 58.513 37.500 3.32 0.00 0.00 4.85
931 1095 1.354040 GCCTGCCGAGATCAATATCG 58.646 55.000 0.00 0.20 40.84 2.92
953 1117 6.455647 TCGGTGACATAGATAGCTTTAATGG 58.544 40.000 0.00 0.00 0.00 3.16
996 1160 2.043248 GAGTGTCGGGAGGGGCTA 60.043 66.667 0.00 0.00 0.00 3.93
1025 1189 2.504244 GACGAGGGCGAGACGTTG 60.504 66.667 0.00 0.00 40.29 4.10
1035 1199 4.280494 AGACGTTGCTGCGACCGT 62.280 61.111 14.18 14.28 36.04 4.83
1073 1237 2.742372 GGCGCCAGTGATCGTGTT 60.742 61.111 24.80 0.00 0.00 3.32
1074 1238 2.325082 GGCGCCAGTGATCGTGTTT 61.325 57.895 24.80 0.00 0.00 2.83
1076 1240 0.452784 GCGCCAGTGATCGTGTTTTC 60.453 55.000 0.00 0.00 0.00 2.29
1077 1241 0.165944 CGCCAGTGATCGTGTTTTCC 59.834 55.000 0.00 0.00 0.00 3.13
1078 1242 0.165944 GCCAGTGATCGTGTTTTCCG 59.834 55.000 0.00 0.00 0.00 4.30
1088 1264 1.468395 CGTGTTTTCCGCTGGTGTTTT 60.468 47.619 0.00 0.00 0.00 2.43
1092 1268 3.118956 TGTTTTCCGCTGGTGTTTTTGAT 60.119 39.130 0.00 0.00 0.00 2.57
1099 1275 1.608590 CTGGTGTTTTTGATCTGCCGT 59.391 47.619 0.00 0.00 0.00 5.68
1100 1276 1.336440 TGGTGTTTTTGATCTGCCGTG 59.664 47.619 0.00 0.00 0.00 4.94
1125 1302 1.269448 GTTTTTGGCAGCTTCGATCCA 59.731 47.619 0.00 0.00 0.00 3.41
1162 1339 1.072806 AGCATTCAGGTGAGTGAGCAA 59.927 47.619 6.66 0.00 34.18 3.91
1176 1353 1.752198 AGCAACTTACGCTCCACCA 59.248 52.632 0.00 0.00 33.35 4.17
1177 1354 0.107831 AGCAACTTACGCTCCACCAA 59.892 50.000 0.00 0.00 33.35 3.67
1178 1355 1.165270 GCAACTTACGCTCCACCAAT 58.835 50.000 0.00 0.00 0.00 3.16
1179 1356 1.135689 GCAACTTACGCTCCACCAATG 60.136 52.381 0.00 0.00 0.00 2.82
1180 1357 1.135689 CAACTTACGCTCCACCAATGC 60.136 52.381 0.00 0.00 0.00 3.56
1181 1358 0.036164 ACTTACGCTCCACCAATGCA 59.964 50.000 0.00 0.00 0.00 3.96
1182 1359 0.729116 CTTACGCTCCACCAATGCAG 59.271 55.000 0.00 0.00 0.00 4.41
1183 1360 0.676466 TTACGCTCCACCAATGCAGG 60.676 55.000 0.00 0.00 0.00 4.85
1184 1361 3.818787 CGCTCCACCAATGCAGGC 61.819 66.667 0.00 0.00 0.00 4.85
1185 1362 2.677524 GCTCCACCAATGCAGGCA 60.678 61.111 0.00 0.00 0.00 4.75
1186 1363 2.707849 GCTCCACCAATGCAGGCAG 61.708 63.158 0.00 0.00 0.00 4.85
1187 1364 1.303888 CTCCACCAATGCAGGCAGT 60.304 57.895 0.00 0.00 0.00 4.40
1188 1365 1.592400 CTCCACCAATGCAGGCAGTG 61.592 60.000 14.20 14.20 41.10 3.66
1192 1369 4.124351 CAATGCAGGCAGTGGCGG 62.124 66.667 13.42 12.54 42.47 6.13
1193 1370 4.349503 AATGCAGGCAGTGGCGGA 62.350 61.111 20.72 12.48 42.47 5.54
1194 1371 4.790962 ATGCAGGCAGTGGCGGAG 62.791 66.667 20.72 11.25 42.47 4.63
1210 1387 2.877335 CGGAGCTTAGTGTAGACCAAC 58.123 52.381 0.00 0.00 0.00 3.77
1211 1388 2.230508 CGGAGCTTAGTGTAGACCAACA 59.769 50.000 0.00 0.00 0.00 3.33
1212 1389 3.673594 CGGAGCTTAGTGTAGACCAACAG 60.674 52.174 0.00 0.00 0.00 3.16
1213 1390 3.368531 GGAGCTTAGTGTAGACCAACAGG 60.369 52.174 0.00 0.00 0.00 4.00
1214 1391 2.567615 AGCTTAGTGTAGACCAACAGGG 59.432 50.000 0.00 0.00 44.81 4.45
1215 1392 2.354805 GCTTAGTGTAGACCAACAGGGG 60.355 54.545 0.00 0.00 42.91 4.79
1221 1398 2.362889 GACCAACAGGGGCCATGG 60.363 66.667 23.64 17.77 39.68 3.66
1222 1399 4.702274 ACCAACAGGGGCCATGGC 62.702 66.667 29.47 29.47 42.91 4.40
1257 1434 4.924305 TTGCATCCATTGAAGAATAGGC 57.076 40.909 0.00 0.00 0.00 3.93
1258 1435 4.174704 TGCATCCATTGAAGAATAGGCT 57.825 40.909 0.00 0.00 0.00 4.58
1259 1436 5.308976 TGCATCCATTGAAGAATAGGCTA 57.691 39.130 0.00 0.00 0.00 3.93
1260 1437 5.065914 TGCATCCATTGAAGAATAGGCTAC 58.934 41.667 0.00 0.00 0.00 3.58
1261 1438 5.065914 GCATCCATTGAAGAATAGGCTACA 58.934 41.667 0.00 0.00 0.00 2.74
1262 1439 5.709164 GCATCCATTGAAGAATAGGCTACAT 59.291 40.000 0.00 0.00 0.00 2.29
1263 1440 6.208204 GCATCCATTGAAGAATAGGCTACATT 59.792 38.462 0.00 0.00 0.00 2.71
1264 1441 7.391554 GCATCCATTGAAGAATAGGCTACATTA 59.608 37.037 0.00 0.00 0.00 1.90
1265 1442 9.458727 CATCCATTGAAGAATAGGCTACATTAT 57.541 33.333 0.00 0.00 0.00 1.28
1266 1443 8.853077 TCCATTGAAGAATAGGCTACATTATG 57.147 34.615 0.00 0.00 0.00 1.90
1267 1444 8.659527 TCCATTGAAGAATAGGCTACATTATGA 58.340 33.333 0.00 0.00 0.00 2.15
1268 1445 8.944029 CCATTGAAGAATAGGCTACATTATGAG 58.056 37.037 0.00 0.00 0.00 2.90
1269 1446 7.969536 TTGAAGAATAGGCTACATTATGAGC 57.030 36.000 0.00 3.80 38.00 4.26
1281 1458 8.608844 GCTACATTATGAGCCTAATTAGTGTT 57.391 34.615 11.50 1.44 32.25 3.32
1282 1459 9.057089 GCTACATTATGAGCCTAATTAGTGTTT 57.943 33.333 11.50 0.00 32.25 2.83
1285 1462 9.461312 ACATTATGAGCCTAATTAGTGTTTGAA 57.539 29.630 11.50 0.19 0.00 2.69
1286 1463 9.722056 CATTATGAGCCTAATTAGTGTTTGAAC 57.278 33.333 11.50 0.00 0.00 3.18
1287 1464 9.686683 ATTATGAGCCTAATTAGTGTTTGAACT 57.313 29.630 11.50 0.00 0.00 3.01
1289 1466 7.900782 TGAGCCTAATTAGTGTTTGAACTAC 57.099 36.000 11.50 0.00 32.39 2.73
1290 1467 7.446769 TGAGCCTAATTAGTGTTTGAACTACA 58.553 34.615 11.50 0.00 32.39 2.74
1291 1468 7.934665 TGAGCCTAATTAGTGTTTGAACTACAA 59.065 33.333 11.50 0.00 32.39 2.41
1292 1469 8.685838 AGCCTAATTAGTGTTTGAACTACAAA 57.314 30.769 11.50 0.00 44.79 2.83
1303 1480 4.230745 TGAACTACAAATTAGCCCCTCC 57.769 45.455 0.00 0.00 0.00 4.30
1304 1481 3.850173 TGAACTACAAATTAGCCCCTCCT 59.150 43.478 0.00 0.00 0.00 3.69
1305 1482 4.291249 TGAACTACAAATTAGCCCCTCCTT 59.709 41.667 0.00 0.00 0.00 3.36
1306 1483 4.505324 ACTACAAATTAGCCCCTCCTTC 57.495 45.455 0.00 0.00 0.00 3.46
1307 1484 2.828661 ACAAATTAGCCCCTCCTTCC 57.171 50.000 0.00 0.00 0.00 3.46
1308 1485 1.288037 ACAAATTAGCCCCTCCTTCCC 59.712 52.381 0.00 0.00 0.00 3.97
1309 1486 1.570979 CAAATTAGCCCCTCCTTCCCT 59.429 52.381 0.00 0.00 0.00 4.20
1310 1487 2.783510 CAAATTAGCCCCTCCTTCCCTA 59.216 50.000 0.00 0.00 0.00 3.53
1311 1488 3.385441 AATTAGCCCCTCCTTCCCTAT 57.615 47.619 0.00 0.00 0.00 2.57
1312 1489 2.910360 TTAGCCCCTCCTTCCCTATT 57.090 50.000 0.00 0.00 0.00 1.73
1313 1490 4.520291 ATTAGCCCCTCCTTCCCTATTA 57.480 45.455 0.00 0.00 0.00 0.98
1314 1491 2.910360 AGCCCCTCCTTCCCTATTAA 57.090 50.000 0.00 0.00 0.00 1.40
1315 1492 2.419686 AGCCCCTCCTTCCCTATTAAC 58.580 52.381 0.00 0.00 0.00 2.01
1316 1493 2.020942 AGCCCCTCCTTCCCTATTAACT 60.021 50.000 0.00 0.00 0.00 2.24
1317 1494 2.784095 GCCCCTCCTTCCCTATTAACTT 59.216 50.000 0.00 0.00 0.00 2.66
1318 1495 3.435169 GCCCCTCCTTCCCTATTAACTTG 60.435 52.174 0.00 0.00 0.00 3.16
1319 1496 3.138468 CCCCTCCTTCCCTATTAACTTGG 59.862 52.174 0.00 0.00 0.00 3.61
1320 1497 3.786450 CCCTCCTTCCCTATTAACTTGGT 59.214 47.826 0.00 0.00 0.00 3.67
1321 1498 4.229812 CCCTCCTTCCCTATTAACTTGGTT 59.770 45.833 0.00 0.00 0.00 3.67
1322 1499 5.437946 CCTCCTTCCCTATTAACTTGGTTC 58.562 45.833 0.00 0.00 0.00 3.62
1323 1500 5.437946 CTCCTTCCCTATTAACTTGGTTCC 58.562 45.833 0.00 0.00 0.00 3.62
1324 1501 5.105853 TCCTTCCCTATTAACTTGGTTCCT 58.894 41.667 0.00 0.00 0.00 3.36
1325 1502 5.554350 TCCTTCCCTATTAACTTGGTTCCTT 59.446 40.000 0.00 0.00 0.00 3.36
1326 1503 6.046286 TCCTTCCCTATTAACTTGGTTCCTTT 59.954 38.462 0.00 0.00 0.00 3.11
1327 1504 6.724441 CCTTCCCTATTAACTTGGTTCCTTTT 59.276 38.462 0.00 0.00 0.00 2.27
1328 1505 7.093902 CCTTCCCTATTAACTTGGTTCCTTTTC 60.094 40.741 0.00 0.00 0.00 2.29
1329 1506 6.854578 TCCCTATTAACTTGGTTCCTTTTCA 58.145 36.000 0.00 0.00 0.00 2.69
1330 1507 6.717997 TCCCTATTAACTTGGTTCCTTTTCAC 59.282 38.462 0.00 0.00 0.00 3.18
1331 1508 6.719829 CCCTATTAACTTGGTTCCTTTTCACT 59.280 38.462 0.00 0.00 0.00 3.41
1332 1509 7.886446 CCCTATTAACTTGGTTCCTTTTCACTA 59.114 37.037 0.00 0.00 0.00 2.74
1333 1510 9.292195 CCTATTAACTTGGTTCCTTTTCACTAA 57.708 33.333 0.00 0.00 0.00 2.24
1336 1513 6.405278 AACTTGGTTCCTTTTCACTAATGG 57.595 37.500 0.00 0.00 33.41 3.16
1337 1514 4.280929 ACTTGGTTCCTTTTCACTAATGGC 59.719 41.667 0.00 0.00 32.43 4.40
1338 1515 3.161866 TGGTTCCTTTTCACTAATGGCC 58.838 45.455 0.00 0.00 32.43 5.36
1339 1516 2.496070 GGTTCCTTTTCACTAATGGCCC 59.504 50.000 0.00 0.00 32.43 5.80
1340 1517 2.496070 GTTCCTTTTCACTAATGGCCCC 59.504 50.000 0.00 0.00 32.43 5.80
1341 1518 1.006639 TCCTTTTCACTAATGGCCCCC 59.993 52.381 0.00 0.00 32.43 5.40
1342 1519 1.007118 CCTTTTCACTAATGGCCCCCT 59.993 52.381 0.00 0.00 0.00 4.79
1343 1520 2.379005 CTTTTCACTAATGGCCCCCTC 58.621 52.381 0.00 0.00 0.00 4.30
1344 1521 1.681229 TTTCACTAATGGCCCCCTCT 58.319 50.000 0.00 0.00 0.00 3.69
1345 1522 1.681229 TTCACTAATGGCCCCCTCTT 58.319 50.000 0.00 0.00 0.00 2.85
1346 1523 0.918983 TCACTAATGGCCCCCTCTTG 59.081 55.000 0.00 0.00 0.00 3.02
1347 1524 0.918983 CACTAATGGCCCCCTCTTGA 59.081 55.000 0.00 0.00 0.00 3.02
1348 1525 1.284785 CACTAATGGCCCCCTCTTGAA 59.715 52.381 0.00 0.00 0.00 2.69
1349 1526 2.091665 CACTAATGGCCCCCTCTTGAAT 60.092 50.000 0.00 0.00 0.00 2.57
1350 1527 2.587307 ACTAATGGCCCCCTCTTGAATT 59.413 45.455 0.00 0.00 0.00 2.17
1351 1528 3.791545 ACTAATGGCCCCCTCTTGAATTA 59.208 43.478 0.00 0.00 0.00 1.40
1352 1529 2.755952 ATGGCCCCCTCTTGAATTAC 57.244 50.000 0.00 0.00 0.00 1.89
1353 1530 1.681229 TGGCCCCCTCTTGAATTACT 58.319 50.000 0.00 0.00 0.00 2.24
1354 1531 1.564348 TGGCCCCCTCTTGAATTACTC 59.436 52.381 0.00 0.00 0.00 2.59
1355 1532 1.847088 GGCCCCCTCTTGAATTACTCT 59.153 52.381 0.00 0.00 0.00 3.24
1356 1533 2.158740 GGCCCCCTCTTGAATTACTCTC 60.159 54.545 0.00 0.00 0.00 3.20
1357 1534 2.505819 GCCCCCTCTTGAATTACTCTCA 59.494 50.000 0.00 0.00 0.00 3.27
1358 1535 3.054361 GCCCCCTCTTGAATTACTCTCAA 60.054 47.826 0.00 0.00 0.00 3.02
1360 1537 4.195416 CCCCTCTTGAATTACTCTCAAGC 58.805 47.826 7.54 0.00 46.22 4.01
1361 1538 4.080638 CCCCTCTTGAATTACTCTCAAGCT 60.081 45.833 7.54 0.00 46.22 3.74
1362 1539 5.115480 CCCTCTTGAATTACTCTCAAGCTC 58.885 45.833 7.54 0.00 46.22 4.09
1363 1540 5.115480 CCTCTTGAATTACTCTCAAGCTCC 58.885 45.833 7.54 0.00 46.22 4.70
1364 1541 4.748892 TCTTGAATTACTCTCAAGCTCCG 58.251 43.478 7.54 0.00 46.22 4.63
1365 1542 2.893637 TGAATTACTCTCAAGCTCCGC 58.106 47.619 0.00 0.00 0.00 5.54
1366 1543 2.205911 GAATTACTCTCAAGCTCCGCC 58.794 52.381 0.00 0.00 0.00 6.13
1367 1544 1.195115 ATTACTCTCAAGCTCCGCCA 58.805 50.000 0.00 0.00 0.00 5.69
1368 1545 0.246635 TTACTCTCAAGCTCCGCCAC 59.753 55.000 0.00 0.00 0.00 5.01
1369 1546 0.612174 TACTCTCAAGCTCCGCCACT 60.612 55.000 0.00 0.00 0.00 4.00
1370 1547 1.447489 CTCTCAAGCTCCGCCACTG 60.447 63.158 0.00 0.00 0.00 3.66
1371 1548 1.881903 CTCTCAAGCTCCGCCACTGA 61.882 60.000 0.00 0.00 0.00 3.41
1372 1549 1.004560 CTCAAGCTCCGCCACTGAA 60.005 57.895 0.00 0.00 0.00 3.02
1373 1550 0.392193 CTCAAGCTCCGCCACTGAAT 60.392 55.000 0.00 0.00 0.00 2.57
1374 1551 0.674581 TCAAGCTCCGCCACTGAATG 60.675 55.000 0.00 0.00 0.00 2.67
1375 1552 2.042831 AAGCTCCGCCACTGAATGC 61.043 57.895 0.00 0.00 0.00 3.56
1376 1553 2.747460 GCTCCGCCACTGAATGCA 60.747 61.111 0.00 0.00 0.00 3.96
1378 1555 2.046023 TCCGCCACTGAATGCAGG 60.046 61.111 5.47 0.00 46.60 4.85
1379 1556 3.818787 CCGCCACTGAATGCAGGC 61.819 66.667 5.47 0.00 46.60 4.85
1380 1557 4.170062 CGCCACTGAATGCAGGCG 62.170 66.667 18.64 18.64 46.60 5.52
1381 1558 3.058160 GCCACTGAATGCAGGCGT 61.058 61.111 5.47 0.00 46.60 5.68
1382 1559 3.044059 GCCACTGAATGCAGGCGTC 62.044 63.158 5.47 0.00 46.60 5.19
1383 1560 2.401766 CCACTGAATGCAGGCGTCC 61.402 63.158 5.47 0.00 46.60 4.79
1384 1561 1.672030 CACTGAATGCAGGCGTCCA 60.672 57.895 5.47 0.00 46.60 4.02
1385 1562 1.376424 ACTGAATGCAGGCGTCCAG 60.376 57.895 5.47 0.00 46.60 3.86
1386 1563 1.078918 CTGAATGCAGGCGTCCAGA 60.079 57.895 0.00 0.00 38.51 3.86
1387 1564 1.078918 TGAATGCAGGCGTCCAGAG 60.079 57.895 0.00 0.00 0.00 3.35
1388 1565 1.817099 GAATGCAGGCGTCCAGAGG 60.817 63.158 0.00 0.00 0.00 3.69
1389 1566 2.527951 GAATGCAGGCGTCCAGAGGT 62.528 60.000 0.00 0.00 0.00 3.85
1390 1567 2.129555 AATGCAGGCGTCCAGAGGTT 62.130 55.000 0.00 0.00 0.00 3.50
1391 1568 2.435059 GCAGGCGTCCAGAGGTTC 60.435 66.667 0.00 0.00 0.00 3.62
1392 1569 3.059982 CAGGCGTCCAGAGGTTCA 58.940 61.111 0.00 0.00 0.00 3.18
1393 1570 1.371183 CAGGCGTCCAGAGGTTCAA 59.629 57.895 0.00 0.00 0.00 2.69
1394 1571 0.951040 CAGGCGTCCAGAGGTTCAAC 60.951 60.000 0.00 0.00 0.00 3.18
1395 1572 1.122019 AGGCGTCCAGAGGTTCAACT 61.122 55.000 0.00 0.00 0.00 3.16
1396 1573 0.951040 GGCGTCCAGAGGTTCAACTG 60.951 60.000 0.00 0.00 0.00 3.16
1397 1574 1.569479 GCGTCCAGAGGTTCAACTGC 61.569 60.000 0.00 0.00 33.40 4.40
1398 1575 1.284982 CGTCCAGAGGTTCAACTGCG 61.285 60.000 0.00 0.00 33.40 5.18
1399 1576 0.249911 GTCCAGAGGTTCAACTGCGT 60.250 55.000 0.00 0.00 33.40 5.24
1400 1577 0.249868 TCCAGAGGTTCAACTGCGTG 60.250 55.000 0.00 0.00 33.40 5.34
1401 1578 1.230635 CCAGAGGTTCAACTGCGTGG 61.231 60.000 0.00 0.00 33.40 4.94
1402 1579 1.071471 AGAGGTTCAACTGCGTGGG 59.929 57.895 0.00 0.00 0.00 4.61
1403 1580 1.227853 GAGGTTCAACTGCGTGGGT 60.228 57.895 0.00 0.00 0.00 4.51
1404 1581 0.034337 GAGGTTCAACTGCGTGGGTA 59.966 55.000 0.00 0.00 0.00 3.69
1405 1582 0.034896 AGGTTCAACTGCGTGGGTAG 59.965 55.000 0.00 0.00 0.00 3.18
1406 1583 0.953960 GGTTCAACTGCGTGGGTAGG 60.954 60.000 0.00 0.00 0.00 3.18
1407 1584 0.034337 GTTCAACTGCGTGGGTAGGA 59.966 55.000 0.00 0.00 0.00 2.94
1408 1585 0.320374 TTCAACTGCGTGGGTAGGAG 59.680 55.000 0.00 0.00 0.00 3.69
1409 1586 1.741770 CAACTGCGTGGGTAGGAGC 60.742 63.158 0.00 0.00 0.00 4.70
1410 1587 1.913762 AACTGCGTGGGTAGGAGCT 60.914 57.895 0.00 0.00 0.00 4.09
1411 1588 1.889530 AACTGCGTGGGTAGGAGCTC 61.890 60.000 4.71 4.71 0.00 4.09
1412 1589 3.417275 CTGCGTGGGTAGGAGCTCG 62.417 68.421 7.83 0.00 0.00 5.03
1413 1590 4.208686 GCGTGGGTAGGAGCTCGG 62.209 72.222 7.83 0.00 0.00 4.63
1414 1591 4.208686 CGTGGGTAGGAGCTCGGC 62.209 72.222 7.83 0.00 0.00 5.54
1415 1592 3.851128 GTGGGTAGGAGCTCGGCC 61.851 72.222 7.83 9.32 0.00 6.13
1416 1593 4.392166 TGGGTAGGAGCTCGGCCA 62.392 66.667 17.67 5.49 0.00 5.36
1417 1594 3.851128 GGGTAGGAGCTCGGCCAC 61.851 72.222 17.67 8.90 0.00 5.01
1418 1595 2.760385 GGTAGGAGCTCGGCCACT 60.760 66.667 7.83 0.84 0.00 4.00
1419 1596 2.496817 GTAGGAGCTCGGCCACTG 59.503 66.667 7.83 0.00 0.00 3.66
1429 1606 3.818787 GGCCACTGAATGCAGGCG 61.819 66.667 5.47 0.00 46.60 5.52
1441 1618 3.059982 CAGGCGTCCAGAGGTTCA 58.940 61.111 0.00 0.00 0.00 3.18
1470 1647 2.037136 CAGGAGCTCGGCTGGTTTG 61.037 63.158 7.83 0.00 39.88 2.93
1524 1712 7.649306 GGATTATTTTGGTAGTTCATGCATGTC 59.351 37.037 25.43 18.74 0.00 3.06
1563 1751 3.358111 TTTCTCATAATTCACGCCCCA 57.642 42.857 0.00 0.00 0.00 4.96
1777 1983 7.823799 TCATGTCATTGTCTTTGCTAATACAGA 59.176 33.333 0.00 0.00 0.00 3.41
1809 2015 6.158598 GCAATCCAATTGTAGTGTCATGTTT 58.841 36.000 4.43 0.00 42.20 2.83
1818 2029 3.498774 AGTGTCATGTTTCAGCTCCTT 57.501 42.857 0.00 0.00 0.00 3.36
1819 2030 3.825328 AGTGTCATGTTTCAGCTCCTTT 58.175 40.909 0.00 0.00 0.00 3.11
1820 2031 4.210331 AGTGTCATGTTTCAGCTCCTTTT 58.790 39.130 0.00 0.00 0.00 2.27
1821 2032 5.376625 AGTGTCATGTTTCAGCTCCTTTTA 58.623 37.500 0.00 0.00 0.00 1.52
1822 2033 6.006449 AGTGTCATGTTTCAGCTCCTTTTAT 58.994 36.000 0.00 0.00 0.00 1.40
1826 2037 8.855110 TGTCATGTTTCAGCTCCTTTTATTTTA 58.145 29.630 0.00 0.00 0.00 1.52
1853 2064 3.321396 TGATGTGCATGGTTGTTCATGTT 59.679 39.130 0.00 0.00 44.54 2.71
2019 3068 0.033228 TTGGGTCTTTTGCATTGCCG 59.967 50.000 6.12 0.00 0.00 5.69
2032 3081 1.737793 CATTGCCGAGAGTTGTTACCC 59.262 52.381 0.00 0.00 0.00 3.69
2081 3132 2.615912 GTTATCCTTCTGTGCATGGAGC 59.384 50.000 0.00 0.00 45.96 4.70
2248 3300 7.279981 TGGTGAACTTCATCAAATTAGGATACG 59.720 37.037 1.98 0.00 34.00 3.06
2249 3301 7.254795 GGTGAACTTCATCAAATTAGGATACGG 60.255 40.741 0.00 0.00 46.39 4.02
2250 3302 7.494625 GTGAACTTCATCAAATTAGGATACGGA 59.505 37.037 0.00 0.00 46.39 4.69
2251 3303 8.210946 TGAACTTCATCAAATTAGGATACGGAT 58.789 33.333 0.00 0.00 46.39 4.18
2252 3304 9.706691 GAACTTCATCAAATTAGGATACGGATA 57.293 33.333 0.00 0.00 46.39 2.59
2253 3305 9.490379 AACTTCATCAAATTAGGATACGGATAC 57.510 33.333 0.00 0.00 46.39 2.24
2295 3348 4.193826 TCAGCAACCTAAGCTCTTACTG 57.806 45.455 0.00 0.00 41.14 2.74
2461 3521 7.915293 TTTCTAAAGAGTTGTGTCTGAAACA 57.085 32.000 0.00 0.00 34.78 2.83
2467 3527 2.951642 AGTTGTGTCTGAAACATGGTGG 59.048 45.455 0.67 0.00 40.80 4.61
2474 3534 1.194547 CTGAAACATGGTGGAACGACG 59.805 52.381 0.00 0.00 38.12 5.12
2488 3548 4.202182 TGGAACGACGGGGAAATAGAATAG 60.202 45.833 0.00 0.00 0.00 1.73
2525 3585 8.364129 TGAAAAGATGTTTTATTTTGAGCACC 57.636 30.769 0.00 0.00 35.94 5.01
2545 3605 3.181451 ACCATGCAGAACTTGTTCTCAGA 60.181 43.478 12.51 1.56 0.00 3.27
2578 3638 7.064371 TGCCATTTTTCATATGTTAACATGTGC 59.936 33.333 30.13 20.28 42.75 4.57
2597 3657 9.461312 ACATGTGCTTCCAAATAAGTTCTATTA 57.539 29.630 0.00 0.00 0.00 0.98
2759 3823 6.338214 TCATTGGCTTTGTATGTTGCTTTA 57.662 33.333 0.00 0.00 0.00 1.85
2807 3871 8.489489 ACTGACATAACTATGATGGACTGAAAT 58.511 33.333 3.73 0.00 37.15 2.17
2849 3921 3.881937 AAATGATTCCTTTCAGGCTGC 57.118 42.857 10.34 0.00 34.61 5.25
2852 3924 1.379044 ATTCCTTTCAGGCTGCCGG 60.379 57.895 13.96 13.43 34.61 6.13
2853 3925 2.142292 ATTCCTTTCAGGCTGCCGGT 62.142 55.000 18.24 0.00 34.61 5.28
2874 3946 3.952628 AAGCTTACGCCAGTCGCCC 62.953 63.158 0.00 0.00 43.23 6.13
2886 3958 1.735198 GTCGCCCGTGATTCGTTCA 60.735 57.895 0.00 0.00 37.94 3.18
2904 3976 1.002792 TCAATCGCGTCTCATCTACCG 60.003 52.381 5.77 0.00 0.00 4.02
2916 3988 4.140994 TCTCATCTACCGGTTCTCCCTAAT 60.141 45.833 15.04 0.00 0.00 1.73
2981 4053 3.056328 GGAAACCGCCAGCCACTC 61.056 66.667 0.00 0.00 0.00 3.51
2987 4059 3.114616 CGCCAGCCACTCGTTCTG 61.115 66.667 0.00 0.00 0.00 3.02
2990 4062 1.668294 CCAGCCACTCGTTCTGTCT 59.332 57.895 0.00 0.00 0.00 3.41
2992 4064 0.315251 CAGCCACTCGTTCTGTCTCA 59.685 55.000 0.00 0.00 0.00 3.27
3033 4106 2.035961 TCGTTTTGTCCCTCTCTCACAG 59.964 50.000 0.00 0.00 0.00 3.66
3040 4113 1.077169 TCCCTCTCTCACAGCACCTTA 59.923 52.381 0.00 0.00 0.00 2.69
3056 4129 6.376581 CAGCACCTTATTTCTCCTTTTCATCT 59.623 38.462 0.00 0.00 0.00 2.90
3066 4139 4.948004 TCTCCTTTTCATCTAGCGTCACTA 59.052 41.667 0.00 0.00 0.00 2.74
3068 4141 4.113354 CCTTTTCATCTAGCGTCACTACC 58.887 47.826 0.00 0.00 0.00 3.18
3093 4166 1.732259 GTAGTTGCGAGGGTGAATGTG 59.268 52.381 0.00 0.00 0.00 3.21
3127 4200 2.680913 GCCGAATGCAAGTGCGAGT 61.681 57.895 0.00 0.00 45.83 4.18
3129 4202 1.291184 CCGAATGCAAGTGCGAGTGA 61.291 55.000 0.00 0.00 45.83 3.41
3132 4205 1.580845 AATGCAAGTGCGAGTGAGGC 61.581 55.000 0.00 0.00 45.83 4.70
3135 4208 2.049063 AAGTGCGAGTGAGGCGTC 60.049 61.111 0.00 0.00 0.00 5.19
3136 4209 2.565645 AAGTGCGAGTGAGGCGTCT 61.566 57.895 8.06 0.00 0.00 4.18
3137 4210 2.755542 AAGTGCGAGTGAGGCGTCTG 62.756 60.000 8.06 0.00 0.00 3.51
3214 4289 0.036952 ACGTGATGCAACTGAGGAGG 60.037 55.000 0.00 0.00 0.00 4.30
3222 4297 1.939838 GCAACTGAGGAGGTACAACCG 60.940 57.143 0.00 0.00 44.90 4.44
3243 4318 1.512926 CGGTTAGTGAAGCTGCAACT 58.487 50.000 0.00 5.17 0.00 3.16
3248 4323 1.590932 AGTGAAGCTGCAACTGTCAG 58.409 50.000 0.00 0.00 34.79 3.51
3275 4350 2.298158 CTACATTCAGACGGCCGGCT 62.298 60.000 32.76 32.76 0.00 5.52
3291 4392 3.823402 CTGCAAGCATGGCGAGAT 58.177 55.556 0.00 0.00 38.51 2.75
3293 4394 2.060004 CTGCAAGCATGGCGAGATGG 62.060 60.000 0.00 0.00 38.51 3.51
3302 4403 2.705826 GCGAGATGGAAAGCTGCG 59.294 61.111 0.00 0.00 0.00 5.18
3330 4431 4.438148 CAAAGATTTTTGTTGGAACCGGT 58.562 39.130 0.00 0.00 39.05 5.28
3332 4433 3.292460 AGATTTTTGTTGGAACCGGTGA 58.708 40.909 8.52 0.00 0.00 4.02
3348 4449 2.295909 CGGTGACATGTTTTGTTGGGAT 59.704 45.455 0.00 0.00 39.18 3.85
3351 4452 3.252215 GTGACATGTTTTGTTGGGATCGA 59.748 43.478 0.00 0.00 39.18 3.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.541278 GGGCGTAAATCTCTTACCTAAATTGT 59.459 38.462 0.00 0.00 0.00 2.71
1 2 6.017357 GGGGCGTAAATCTCTTACCTAAATTG 60.017 42.308 0.00 0.00 0.00 2.32
2 3 6.060136 GGGGCGTAAATCTCTTACCTAAATT 58.940 40.000 0.00 0.00 0.00 1.82
3 4 5.618236 GGGGCGTAAATCTCTTACCTAAAT 58.382 41.667 0.00 0.00 0.00 1.40
4 5 4.441913 CGGGGCGTAAATCTCTTACCTAAA 60.442 45.833 0.00 0.00 0.00 1.85
5 6 3.068590 CGGGGCGTAAATCTCTTACCTAA 59.931 47.826 0.00 0.00 0.00 2.69
6 7 2.624838 CGGGGCGTAAATCTCTTACCTA 59.375 50.000 0.00 0.00 0.00 3.08
7 8 1.411612 CGGGGCGTAAATCTCTTACCT 59.588 52.381 0.00 0.00 0.00 3.08
8 9 1.861971 CGGGGCGTAAATCTCTTACC 58.138 55.000 0.00 0.00 0.00 2.85
9 10 1.202498 AGCGGGGCGTAAATCTCTTAC 60.202 52.381 0.00 0.00 0.00 2.34
10 11 1.117150 AGCGGGGCGTAAATCTCTTA 58.883 50.000 0.00 0.00 0.00 2.10
11 12 0.252197 AAGCGGGGCGTAAATCTCTT 59.748 50.000 0.00 0.00 0.00 2.85
12 13 0.462047 CAAGCGGGGCGTAAATCTCT 60.462 55.000 0.00 0.00 0.00 3.10
13 14 1.436983 CCAAGCGGGGCGTAAATCTC 61.437 60.000 0.00 0.00 0.00 2.75
14 15 1.451387 CCAAGCGGGGCGTAAATCT 60.451 57.895 0.00 0.00 0.00 2.40
15 16 1.027792 TTCCAAGCGGGGCGTAAATC 61.028 55.000 0.00 0.00 37.22 2.17
16 17 0.395173 ATTCCAAGCGGGGCGTAAAT 60.395 50.000 0.00 0.00 37.22 1.40
17 18 1.001887 ATTCCAAGCGGGGCGTAAA 60.002 52.632 0.00 0.00 37.22 2.01
18 19 1.450669 GATTCCAAGCGGGGCGTAA 60.451 57.895 0.00 0.00 37.22 3.18
19 20 2.188469 GATTCCAAGCGGGGCGTA 59.812 61.111 0.00 0.00 37.22 4.42
26 27 2.225068 AGATACACCGATTCCAAGCG 57.775 50.000 0.00 0.00 37.59 4.68
27 28 6.043411 GGATATAGATACACCGATTCCAAGC 58.957 44.000 0.00 0.00 0.00 4.01
28 29 7.093727 ACAGGATATAGATACACCGATTCCAAG 60.094 40.741 0.00 0.00 0.00 3.61
29 30 6.724441 ACAGGATATAGATACACCGATTCCAA 59.276 38.462 0.00 0.00 0.00 3.53
30 31 6.253758 ACAGGATATAGATACACCGATTCCA 58.746 40.000 0.00 0.00 0.00 3.53
31 32 6.777213 ACAGGATATAGATACACCGATTCC 57.223 41.667 0.00 0.00 0.00 3.01
56 57 9.623350 GCCGGTAAAATACACTTGTAAAATAAA 57.377 29.630 1.90 0.00 33.76 1.40
57 58 8.242739 GGCCGGTAAAATACACTTGTAAAATAA 58.757 33.333 1.90 0.00 33.76 1.40
58 59 7.392673 TGGCCGGTAAAATACACTTGTAAAATA 59.607 33.333 1.90 0.00 33.76 1.40
59 60 6.208994 TGGCCGGTAAAATACACTTGTAAAAT 59.791 34.615 1.90 0.00 33.76 1.82
60 61 5.533903 TGGCCGGTAAAATACACTTGTAAAA 59.466 36.000 1.90 0.00 33.76 1.52
61 62 5.048852 GTGGCCGGTAAAATACACTTGTAAA 60.049 40.000 1.90 0.00 33.76 2.01
62 63 4.455190 GTGGCCGGTAAAATACACTTGTAA 59.545 41.667 1.90 0.00 33.76 2.41
63 64 4.002316 GTGGCCGGTAAAATACACTTGTA 58.998 43.478 1.90 0.00 34.67 2.41
64 65 2.815503 GTGGCCGGTAAAATACACTTGT 59.184 45.455 1.90 0.00 0.00 3.16
65 66 2.159626 CGTGGCCGGTAAAATACACTTG 60.160 50.000 1.90 0.00 0.00 3.16
66 67 2.078392 CGTGGCCGGTAAAATACACTT 58.922 47.619 1.90 0.00 0.00 3.16
67 68 1.729284 CGTGGCCGGTAAAATACACT 58.271 50.000 1.90 0.00 0.00 3.55
68 69 0.097499 GCGTGGCCGGTAAAATACAC 59.903 55.000 1.90 0.73 33.68 2.90
69 70 0.036199 AGCGTGGCCGGTAAAATACA 60.036 50.000 1.90 0.00 44.16 2.29
70 71 1.089112 AAGCGTGGCCGGTAAAATAC 58.911 50.000 1.90 0.00 45.47 1.89
71 72 1.088306 CAAGCGTGGCCGGTAAAATA 58.912 50.000 1.90 0.00 45.47 1.40
72 73 0.606944 TCAAGCGTGGCCGGTAAAAT 60.607 50.000 1.90 0.00 45.47 1.82
73 74 0.606944 ATCAAGCGTGGCCGGTAAAA 60.607 50.000 1.90 0.00 45.47 1.52
74 75 0.249676 TATCAAGCGTGGCCGGTAAA 59.750 50.000 1.90 0.00 45.47 2.01
75 76 0.249676 TTATCAAGCGTGGCCGGTAA 59.750 50.000 1.90 0.00 45.47 2.85
76 77 0.466543 ATTATCAAGCGTGGCCGGTA 59.533 50.000 1.90 0.00 45.47 4.02
78 79 1.507141 GGATTATCAAGCGTGGCCGG 61.507 60.000 0.00 0.00 33.68 6.13
79 80 0.813610 TGGATTATCAAGCGTGGCCG 60.814 55.000 0.00 0.00 37.07 6.13
80 81 0.663153 GTGGATTATCAAGCGTGGCC 59.337 55.000 0.00 0.00 0.00 5.36
81 82 0.663153 GGTGGATTATCAAGCGTGGC 59.337 55.000 0.00 0.00 0.00 5.01
82 83 1.942657 CAGGTGGATTATCAAGCGTGG 59.057 52.381 0.00 0.00 0.00 4.94
83 84 1.942657 CCAGGTGGATTATCAAGCGTG 59.057 52.381 0.00 0.00 37.39 5.34
84 85 1.837439 TCCAGGTGGATTATCAAGCGT 59.163 47.619 0.00 0.00 39.78 5.07
85 86 2.620251 TCCAGGTGGATTATCAAGCG 57.380 50.000 0.00 0.00 39.78 4.68
108 109 2.094675 CACGCCTCCATCCATCTTTTT 58.905 47.619 0.00 0.00 0.00 1.94
109 110 1.004745 ACACGCCTCCATCCATCTTTT 59.995 47.619 0.00 0.00 0.00 2.27
110 111 0.620556 ACACGCCTCCATCCATCTTT 59.379 50.000 0.00 0.00 0.00 2.52
111 112 1.496060 TACACGCCTCCATCCATCTT 58.504 50.000 0.00 0.00 0.00 2.40
112 113 1.414181 CTTACACGCCTCCATCCATCT 59.586 52.381 0.00 0.00 0.00 2.90
113 114 1.139058 ACTTACACGCCTCCATCCATC 59.861 52.381 0.00 0.00 0.00 3.51
114 115 1.204146 ACTTACACGCCTCCATCCAT 58.796 50.000 0.00 0.00 0.00 3.41
115 116 0.981183 AACTTACACGCCTCCATCCA 59.019 50.000 0.00 0.00 0.00 3.41
116 117 2.109425 AAACTTACACGCCTCCATCC 57.891 50.000 0.00 0.00 0.00 3.51
117 118 3.998341 TGTAAAACTTACACGCCTCCATC 59.002 43.478 0.00 0.00 0.00 3.51
118 119 4.000988 CTGTAAAACTTACACGCCTCCAT 58.999 43.478 0.00 0.00 0.00 3.41
119 120 3.395639 CTGTAAAACTTACACGCCTCCA 58.604 45.455 0.00 0.00 0.00 3.86
120 121 2.740447 CCTGTAAAACTTACACGCCTCC 59.260 50.000 0.00 0.00 0.00 4.30
121 122 3.185797 CACCTGTAAAACTTACACGCCTC 59.814 47.826 0.00 0.00 0.00 4.70
122 123 3.135994 CACCTGTAAAACTTACACGCCT 58.864 45.455 0.00 0.00 0.00 5.52
123 124 2.874086 ACACCTGTAAAACTTACACGCC 59.126 45.455 0.00 0.00 0.00 5.68
124 125 5.851047 ATACACCTGTAAAACTTACACGC 57.149 39.130 0.00 0.00 33.76 5.34
125 126 6.237384 CGCTATACACCTGTAAAACTTACACG 60.237 42.308 0.00 0.00 33.76 4.49
126 127 6.454715 GCGCTATACACCTGTAAAACTTACAC 60.455 42.308 0.00 0.00 33.76 2.90
127 128 5.577945 GCGCTATACACCTGTAAAACTTACA 59.422 40.000 0.00 0.00 33.76 2.41
128 129 5.809051 AGCGCTATACACCTGTAAAACTTAC 59.191 40.000 8.99 0.00 33.76 2.34
129 130 5.969423 AGCGCTATACACCTGTAAAACTTA 58.031 37.500 8.99 0.00 33.76 2.24
130 131 4.828829 AGCGCTATACACCTGTAAAACTT 58.171 39.130 8.99 0.00 33.76 2.66
131 132 4.159879 AGAGCGCTATACACCTGTAAAACT 59.840 41.667 11.50 0.00 33.76 2.66
132 133 4.267928 CAGAGCGCTATACACCTGTAAAAC 59.732 45.833 11.50 0.00 33.76 2.43
133 134 4.158949 TCAGAGCGCTATACACCTGTAAAA 59.841 41.667 11.50 0.00 33.76 1.52
134 135 3.697542 TCAGAGCGCTATACACCTGTAAA 59.302 43.478 11.50 0.00 33.76 2.01
135 136 3.284617 TCAGAGCGCTATACACCTGTAA 58.715 45.455 11.50 0.00 33.76 2.41
136 137 2.927028 TCAGAGCGCTATACACCTGTA 58.073 47.619 11.50 0.00 34.67 2.74
137 138 1.763968 TCAGAGCGCTATACACCTGT 58.236 50.000 11.50 0.00 0.00 4.00
138 139 2.860735 GTTTCAGAGCGCTATACACCTG 59.139 50.000 11.50 12.93 0.00 4.00
139 140 2.479730 CGTTTCAGAGCGCTATACACCT 60.480 50.000 11.50 0.00 0.00 4.00
140 141 1.852895 CGTTTCAGAGCGCTATACACC 59.147 52.381 11.50 0.00 0.00 4.16
141 142 2.784380 CTCGTTTCAGAGCGCTATACAC 59.216 50.000 11.50 3.41 0.00 2.90
142 143 2.681344 TCTCGTTTCAGAGCGCTATACA 59.319 45.455 11.50 0.00 38.12 2.29
143 144 3.335786 TCTCGTTTCAGAGCGCTATAC 57.664 47.619 11.50 0.59 38.12 1.47
144 145 4.537965 GATTCTCGTTTCAGAGCGCTATA 58.462 43.478 11.50 0.00 38.12 1.31
145 146 2.941453 TTCTCGTTTCAGAGCGCTAT 57.059 45.000 11.50 3.14 38.12 2.97
146 147 2.479730 GGATTCTCGTTTCAGAGCGCTA 60.480 50.000 11.50 0.00 38.12 4.26
147 148 1.634702 GATTCTCGTTTCAGAGCGCT 58.365 50.000 11.27 11.27 38.12 5.92
148 149 0.647925 GGATTCTCGTTTCAGAGCGC 59.352 55.000 0.00 0.00 38.12 5.92
149 150 1.996292 TGGATTCTCGTTTCAGAGCG 58.004 50.000 0.00 0.00 38.12 5.03
150 151 3.935203 TGATTGGATTCTCGTTTCAGAGC 59.065 43.478 0.00 0.00 38.12 4.09
151 152 4.569966 CCTGATTGGATTCTCGTTTCAGAG 59.430 45.833 0.00 0.00 38.35 3.35
152 153 4.507710 CCTGATTGGATTCTCGTTTCAGA 58.492 43.478 0.00 0.00 38.35 3.27
153 154 3.064545 GCCTGATTGGATTCTCGTTTCAG 59.935 47.826 0.00 0.00 38.35 3.02
154 155 3.009723 GCCTGATTGGATTCTCGTTTCA 58.990 45.455 0.00 0.00 38.35 2.69
155 156 2.356069 GGCCTGATTGGATTCTCGTTTC 59.644 50.000 0.00 0.00 38.35 2.78
156 157 2.369394 GGCCTGATTGGATTCTCGTTT 58.631 47.619 0.00 0.00 38.35 3.60
157 158 1.408822 GGGCCTGATTGGATTCTCGTT 60.409 52.381 0.84 0.00 38.35 3.85
158 159 0.181350 GGGCCTGATTGGATTCTCGT 59.819 55.000 0.84 0.00 38.35 4.18
159 160 0.471617 AGGGCCTGATTGGATTCTCG 59.528 55.000 4.50 0.00 38.35 4.04
160 161 2.744352 AAGGGCCTGATTGGATTCTC 57.256 50.000 6.92 0.00 38.35 2.87
161 162 3.397527 TCTAAGGGCCTGATTGGATTCT 58.602 45.455 6.92 0.00 38.35 2.40
162 163 3.864789 TCTAAGGGCCTGATTGGATTC 57.135 47.619 6.92 0.00 38.35 2.52
163 164 4.821532 AATCTAAGGGCCTGATTGGATT 57.178 40.909 16.07 12.49 38.35 3.01
164 165 6.474918 AATAATCTAAGGGCCTGATTGGAT 57.525 37.500 22.80 11.87 38.35 3.41
165 166 5.930209 AATAATCTAAGGGCCTGATTGGA 57.070 39.130 22.80 10.19 38.35 3.53
166 167 5.835280 ACAAATAATCTAAGGGCCTGATTGG 59.165 40.000 22.80 14.29 39.35 3.16
167 168 6.322201 ACACAAATAATCTAAGGGCCTGATTG 59.678 38.462 22.80 12.23 33.24 2.67
168 169 6.435164 ACACAAATAATCTAAGGGCCTGATT 58.565 36.000 19.50 19.50 35.08 2.57
169 170 6.018433 ACACAAATAATCTAAGGGCCTGAT 57.982 37.500 6.92 3.11 0.00 2.90
170 171 5.450818 ACACAAATAATCTAAGGGCCTGA 57.549 39.130 6.92 0.00 0.00 3.86
171 172 5.765182 CCTACACAAATAATCTAAGGGCCTG 59.235 44.000 6.92 0.00 0.00 4.85
172 173 5.432060 ACCTACACAAATAATCTAAGGGCCT 59.568 40.000 0.00 0.00 0.00 5.19
173 174 5.691896 ACCTACACAAATAATCTAAGGGCC 58.308 41.667 0.00 0.00 0.00 5.80
174 175 8.919777 ATAACCTACACAAATAATCTAAGGGC 57.080 34.615 0.00 0.00 0.00 5.19
207 208 9.194972 CTTATACCCTGAGATCTCTGCATTATA 57.805 37.037 22.95 16.92 0.00 0.98
218 219 3.556004 GCTGCACCTTATACCCTGAGATC 60.556 52.174 0.00 0.00 0.00 2.75
227 228 6.238484 CCAAGACTTATTGCTGCACCTTATAC 60.238 42.308 0.00 0.00 0.00 1.47
283 284 5.565592 TTCGTGCAAGCATCATATCTTTT 57.434 34.783 0.00 0.00 0.00 2.27
329 330 7.550196 AGCAATGTTTCAATCTTTTTGTGAAGT 59.450 29.630 0.00 0.00 33.10 3.01
342 343 5.536161 ACAGTTGTAGGAGCAATGTTTCAAT 59.464 36.000 0.00 0.00 0.00 2.57
343 344 4.887071 ACAGTTGTAGGAGCAATGTTTCAA 59.113 37.500 0.00 0.00 0.00 2.69
358 359 3.118186 AGCAAACAGGTACCACAGTTGTA 60.118 43.478 15.94 0.00 0.00 2.41
382 383 2.093341 GCTTACCCGTAACCTTCCATCA 60.093 50.000 0.00 0.00 0.00 3.07
383 384 2.169978 AGCTTACCCGTAACCTTCCATC 59.830 50.000 0.00 0.00 0.00 3.51
385 386 1.551883 GAGCTTACCCGTAACCTTCCA 59.448 52.381 0.00 0.00 0.00 3.53
387 388 2.233186 AGTGAGCTTACCCGTAACCTTC 59.767 50.000 4.79 0.00 0.00 3.46
388 389 2.254508 AGTGAGCTTACCCGTAACCTT 58.745 47.619 4.79 0.00 0.00 3.50
389 390 1.934410 AGTGAGCTTACCCGTAACCT 58.066 50.000 4.79 0.00 0.00 3.50
390 391 2.756840 AAGTGAGCTTACCCGTAACC 57.243 50.000 4.79 0.00 32.27 2.85
391 392 4.802563 GTGATAAGTGAGCTTACCCGTAAC 59.197 45.833 4.79 0.00 39.70 2.50
392 393 4.463539 TGTGATAAGTGAGCTTACCCGTAA 59.536 41.667 4.79 0.00 39.70 3.18
393 394 4.018490 TGTGATAAGTGAGCTTACCCGTA 58.982 43.478 4.79 0.00 39.70 4.02
394 395 2.829720 TGTGATAAGTGAGCTTACCCGT 59.170 45.455 4.79 0.00 39.70 5.28
395 396 3.448686 CTGTGATAAGTGAGCTTACCCG 58.551 50.000 4.79 0.00 39.70 5.28
396 397 3.451178 TCCTGTGATAAGTGAGCTTACCC 59.549 47.826 4.79 0.00 39.70 3.69
430 440 1.295792 TTCGTGAAGCACACTGAACC 58.704 50.000 11.18 0.00 46.24 3.62
479 489 5.948992 ACTTAGGCTCAAAACTGATGAAC 57.051 39.130 0.00 0.00 0.00 3.18
485 495 5.712152 AATGGAACTTAGGCTCAAAACTG 57.288 39.130 0.00 0.00 0.00 3.16
496 506 8.689972 AGGAAGCATCAATAAAATGGAACTTAG 58.310 33.333 0.00 0.00 0.00 2.18
530 540 5.103940 AGGAAGAGGCAAGCCAATAAATCTA 60.104 40.000 14.40 0.00 38.92 1.98
531 541 3.956848 GGAAGAGGCAAGCCAATAAATCT 59.043 43.478 14.40 3.16 38.92 2.40
545 699 1.101331 CAAATGGCAGAGGAAGAGGC 58.899 55.000 0.00 0.00 0.00 4.70
557 711 7.105241 AGTAATCTGAAGGAAATCAAATGGC 57.895 36.000 0.00 0.00 0.00 4.40
588 742 7.615365 TGCCAGATCTGTAACCTTGAAATTTAT 59.385 33.333 21.11 0.00 0.00 1.40
606 760 5.298527 TGATTGTCTCATTCAATGCCAGATC 59.701 40.000 0.00 0.00 35.94 2.75
626 780 9.597681 AAGCATCCTTCAATCCTAATAATGATT 57.402 29.630 0.00 0.00 0.00 2.57
628 782 8.627208 GAAGCATCCTTCAATCCTAATAATGA 57.373 34.615 0.00 0.00 45.44 2.57
733 887 6.470235 GCACTAATCAATATTGTGACAGTTGC 59.530 38.462 14.97 11.73 31.38 4.17
776 931 9.991906 ACAGCTACACAAAATCTAAAACTACTA 57.008 29.630 0.00 0.00 0.00 1.82
787 942 9.967346 TGAGATACTATACAGCTACACAAAATC 57.033 33.333 0.00 0.00 0.00 2.17
788 943 9.973450 CTGAGATACTATACAGCTACACAAAAT 57.027 33.333 0.00 0.00 0.00 1.82
896 1060 4.328712 CGGCAGGCCATTTTGTTTTAATAC 59.671 41.667 5.01 0.00 35.37 1.89
901 1065 0.755686 TCGGCAGGCCATTTTGTTTT 59.244 45.000 5.01 0.00 35.37 2.43
918 1082 6.183309 TCTATGTCACCGATATTGATCTCG 57.817 41.667 0.00 0.00 34.73 4.04
931 1095 6.769512 TCCCATTAAAGCTATCTATGTCACC 58.230 40.000 0.00 0.00 0.00 4.02
937 1101 9.902684 CTTCATCATCCCATTAAAGCTATCTAT 57.097 33.333 0.00 0.00 0.00 1.98
953 1117 3.949754 TCAGGTCAAATGCTTCATCATCC 59.050 43.478 0.00 0.00 0.00 3.51
1035 1199 4.308458 CTCCACCGGTTGCGGTCA 62.308 66.667 2.97 0.00 40.77 4.02
1062 1226 1.148310 CAGCGGAAAACACGATCACT 58.852 50.000 0.00 0.00 0.00 3.41
1067 1231 0.745128 AACACCAGCGGAAAACACGA 60.745 50.000 1.50 0.00 0.00 4.35
1073 1237 2.955660 AGATCAAAAACACCAGCGGAAA 59.044 40.909 0.00 0.00 0.00 3.13
1074 1238 2.293122 CAGATCAAAAACACCAGCGGAA 59.707 45.455 0.00 0.00 0.00 4.30
1076 1240 1.666888 GCAGATCAAAAACACCAGCGG 60.667 52.381 0.00 0.00 0.00 5.52
1077 1241 1.666888 GGCAGATCAAAAACACCAGCG 60.667 52.381 0.00 0.00 0.00 5.18
1078 1242 1.666888 CGGCAGATCAAAAACACCAGC 60.667 52.381 0.00 0.00 0.00 4.85
1099 1275 1.391157 AAGCTGCCAAAAACCGAGCA 61.391 50.000 0.00 0.00 31.80 4.26
1100 1276 0.664466 GAAGCTGCCAAAAACCGAGC 60.664 55.000 0.00 0.00 0.00 5.03
1125 1302 1.925255 TGCTTCTGGAGGGGATCAATT 59.075 47.619 0.00 0.00 0.00 2.32
1162 1339 0.036164 TGCATTGGTGGAGCGTAAGT 59.964 50.000 0.00 0.00 41.68 2.24
1176 1353 4.349503 TCCGCCACTGCCTGCATT 62.350 61.111 0.00 0.00 0.00 3.56
1177 1354 4.790962 CTCCGCCACTGCCTGCAT 62.791 66.667 0.00 0.00 0.00 3.96
1180 1357 3.315142 TAAGCTCCGCCACTGCCTG 62.315 63.158 0.00 0.00 0.00 4.85
1181 1358 3.003173 TAAGCTCCGCCACTGCCT 61.003 61.111 0.00 0.00 0.00 4.75
1182 1359 2.512515 CTAAGCTCCGCCACTGCC 60.513 66.667 0.00 0.00 0.00 4.85
1183 1360 2.103042 CACTAAGCTCCGCCACTGC 61.103 63.158 0.00 0.00 0.00 4.40
1184 1361 0.530744 TACACTAAGCTCCGCCACTG 59.469 55.000 0.00 0.00 0.00 3.66
1185 1362 0.818296 CTACACTAAGCTCCGCCACT 59.182 55.000 0.00 0.00 0.00 4.00
1186 1363 0.815734 TCTACACTAAGCTCCGCCAC 59.184 55.000 0.00 0.00 0.00 5.01
1187 1364 0.815734 GTCTACACTAAGCTCCGCCA 59.184 55.000 0.00 0.00 0.00 5.69
1188 1365 0.102663 GGTCTACACTAAGCTCCGCC 59.897 60.000 0.00 0.00 0.00 6.13
1189 1366 0.815734 TGGTCTACACTAAGCTCCGC 59.184 55.000 0.00 0.00 0.00 5.54
1190 1367 2.230508 TGTTGGTCTACACTAAGCTCCG 59.769 50.000 0.00 0.00 0.00 4.63
1191 1368 3.368531 CCTGTTGGTCTACACTAAGCTCC 60.369 52.174 0.00 0.00 0.00 4.70
1192 1369 3.368531 CCCTGTTGGTCTACACTAAGCTC 60.369 52.174 0.00 0.00 0.00 4.09
1193 1370 2.567615 CCCTGTTGGTCTACACTAAGCT 59.432 50.000 0.00 0.00 0.00 3.74
1194 1371 2.354805 CCCCTGTTGGTCTACACTAAGC 60.355 54.545 0.00 0.00 0.00 3.09
1195 1372 2.354805 GCCCCTGTTGGTCTACACTAAG 60.355 54.545 0.00 0.00 0.00 2.18
1196 1373 1.626825 GCCCCTGTTGGTCTACACTAA 59.373 52.381 0.00 0.00 0.00 2.24
1197 1374 1.272807 GCCCCTGTTGGTCTACACTA 58.727 55.000 0.00 0.00 0.00 2.74
1198 1375 1.489560 GGCCCCTGTTGGTCTACACT 61.490 60.000 0.00 0.00 0.00 3.55
1199 1376 1.002502 GGCCCCTGTTGGTCTACAC 60.003 63.158 0.00 0.00 0.00 2.90
1200 1377 0.844661 ATGGCCCCTGTTGGTCTACA 60.845 55.000 0.00 0.00 0.00 2.74
1201 1378 0.394352 CATGGCCCCTGTTGGTCTAC 60.394 60.000 0.00 0.00 0.00 2.59
1202 1379 1.570857 CCATGGCCCCTGTTGGTCTA 61.571 60.000 0.00 0.00 0.00 2.59
1203 1380 2.765969 CATGGCCCCTGTTGGTCT 59.234 61.111 0.00 0.00 0.00 3.85
1204 1381 2.362889 CCATGGCCCCTGTTGGTC 60.363 66.667 0.00 0.00 0.00 4.02
1205 1382 4.702274 GCCATGGCCCCTGTTGGT 62.702 66.667 27.24 0.00 34.56 3.67
1233 1410 6.070653 AGCCTATTCTTCAATGGATGCAAAAA 60.071 34.615 0.00 0.00 0.00 1.94
1234 1411 5.422970 AGCCTATTCTTCAATGGATGCAAAA 59.577 36.000 0.00 0.00 0.00 2.44
1235 1412 4.957954 AGCCTATTCTTCAATGGATGCAAA 59.042 37.500 0.00 0.00 0.00 3.68
1236 1413 4.539726 AGCCTATTCTTCAATGGATGCAA 58.460 39.130 0.00 0.00 0.00 4.08
1237 1414 4.174704 AGCCTATTCTTCAATGGATGCA 57.825 40.909 0.00 0.00 0.00 3.96
1238 1415 5.065914 TGTAGCCTATTCTTCAATGGATGC 58.934 41.667 0.00 0.00 0.00 3.91
1239 1416 7.756395 AATGTAGCCTATTCTTCAATGGATG 57.244 36.000 0.00 0.00 0.00 3.51
1240 1417 9.458727 CATAATGTAGCCTATTCTTCAATGGAT 57.541 33.333 0.00 0.00 0.00 3.41
1241 1418 8.659527 TCATAATGTAGCCTATTCTTCAATGGA 58.340 33.333 0.00 0.00 0.00 3.41
1242 1419 8.853077 TCATAATGTAGCCTATTCTTCAATGG 57.147 34.615 0.00 0.00 0.00 3.16
1243 1420 8.449397 GCTCATAATGTAGCCTATTCTTCAATG 58.551 37.037 0.00 0.00 32.40 2.82
1244 1421 8.558973 GCTCATAATGTAGCCTATTCTTCAAT 57.441 34.615 0.00 0.00 32.40 2.57
1245 1422 7.969536 GCTCATAATGTAGCCTATTCTTCAA 57.030 36.000 0.00 0.00 32.40 2.69
1256 1433 8.608844 AACACTAATTAGGCTCATAATGTAGC 57.391 34.615 16.73 0.00 38.03 3.58
1259 1436 9.461312 TTCAAACACTAATTAGGCTCATAATGT 57.539 29.630 16.73 6.39 0.00 2.71
1260 1437 9.722056 GTTCAAACACTAATTAGGCTCATAATG 57.278 33.333 16.73 5.79 0.00 1.90
1261 1438 9.686683 AGTTCAAACACTAATTAGGCTCATAAT 57.313 29.630 16.73 0.00 0.00 1.28
1263 1440 9.595823 GTAGTTCAAACACTAATTAGGCTCATA 57.404 33.333 16.73 0.00 30.86 2.15
1264 1441 8.100791 TGTAGTTCAAACACTAATTAGGCTCAT 58.899 33.333 16.73 0.00 30.86 2.90
1265 1442 7.446769 TGTAGTTCAAACACTAATTAGGCTCA 58.553 34.615 16.73 0.00 30.86 4.26
1266 1443 7.900782 TGTAGTTCAAACACTAATTAGGCTC 57.099 36.000 16.73 0.00 30.86 4.70
1267 1444 8.685838 TTTGTAGTTCAAACACTAATTAGGCT 57.314 30.769 16.73 0.00 40.56 4.58
1268 1445 9.908152 AATTTGTAGTTCAAACACTAATTAGGC 57.092 29.630 16.73 0.00 46.77 3.93
1272 1449 9.908152 GGCTAATTTGTAGTTCAAACACTAATT 57.092 29.630 0.00 14.82 46.77 1.40
1273 1450 8.520351 GGGCTAATTTGTAGTTCAAACACTAAT 58.480 33.333 0.00 0.00 46.77 1.73
1274 1451 7.040271 GGGGCTAATTTGTAGTTCAAACACTAA 60.040 37.037 0.00 0.00 46.77 2.24
1275 1452 6.431852 GGGGCTAATTTGTAGTTCAAACACTA 59.568 38.462 0.00 0.00 46.77 2.74
1276 1453 5.243060 GGGGCTAATTTGTAGTTCAAACACT 59.757 40.000 0.00 0.00 46.77 3.55
1277 1454 5.243060 AGGGGCTAATTTGTAGTTCAAACAC 59.757 40.000 0.00 0.00 46.77 3.32
1278 1455 5.390387 AGGGGCTAATTTGTAGTTCAAACA 58.610 37.500 0.00 0.00 46.77 2.83
1279 1456 5.105877 GGAGGGGCTAATTTGTAGTTCAAAC 60.106 44.000 0.00 0.00 46.77 2.93
1281 1458 4.291249 AGGAGGGGCTAATTTGTAGTTCAA 59.709 41.667 0.00 0.00 0.00 2.69
1282 1459 3.850173 AGGAGGGGCTAATTTGTAGTTCA 59.150 43.478 0.00 0.00 0.00 3.18
1283 1460 4.505324 AGGAGGGGCTAATTTGTAGTTC 57.495 45.455 0.00 0.00 0.00 3.01
1284 1461 4.325109 GGAAGGAGGGGCTAATTTGTAGTT 60.325 45.833 0.00 0.00 0.00 2.24
1285 1462 3.202373 GGAAGGAGGGGCTAATTTGTAGT 59.798 47.826 0.00 0.00 0.00 2.73
1286 1463 3.435169 GGGAAGGAGGGGCTAATTTGTAG 60.435 52.174 0.00 0.00 0.00 2.74
1287 1464 2.512476 GGGAAGGAGGGGCTAATTTGTA 59.488 50.000 0.00 0.00 0.00 2.41
1288 1465 1.288037 GGGAAGGAGGGGCTAATTTGT 59.712 52.381 0.00 0.00 0.00 2.83
1289 1466 1.570979 AGGGAAGGAGGGGCTAATTTG 59.429 52.381 0.00 0.00 0.00 2.32
1290 1467 2.001767 AGGGAAGGAGGGGCTAATTT 57.998 50.000 0.00 0.00 0.00 1.82
1291 1468 2.910360 TAGGGAAGGAGGGGCTAATT 57.090 50.000 0.00 0.00 0.00 1.40
1292 1469 3.385441 AATAGGGAAGGAGGGGCTAAT 57.615 47.619 0.00 0.00 0.00 1.73
1293 1470 2.910360 AATAGGGAAGGAGGGGCTAA 57.090 50.000 0.00 0.00 0.00 3.09
1294 1471 3.211465 AGTTAATAGGGAAGGAGGGGCTA 59.789 47.826 0.00 0.00 0.00 3.93
1295 1472 2.020942 AGTTAATAGGGAAGGAGGGGCT 60.021 50.000 0.00 0.00 0.00 5.19
1296 1473 2.419686 AGTTAATAGGGAAGGAGGGGC 58.580 52.381 0.00 0.00 0.00 5.80
1297 1474 3.138468 CCAAGTTAATAGGGAAGGAGGGG 59.862 52.174 0.00 0.00 0.00 4.79
1298 1475 3.786450 ACCAAGTTAATAGGGAAGGAGGG 59.214 47.826 0.00 0.00 0.00 4.30
1299 1476 5.437946 GAACCAAGTTAATAGGGAAGGAGG 58.562 45.833 0.00 0.00 0.00 4.30
1300 1477 5.191921 AGGAACCAAGTTAATAGGGAAGGAG 59.808 44.000 0.00 0.00 0.00 3.69
1301 1478 5.105853 AGGAACCAAGTTAATAGGGAAGGA 58.894 41.667 0.00 0.00 0.00 3.36
1302 1479 5.452341 AGGAACCAAGTTAATAGGGAAGG 57.548 43.478 0.00 0.00 0.00 3.46
1303 1480 7.450323 TGAAAAGGAACCAAGTTAATAGGGAAG 59.550 37.037 0.00 0.00 0.00 3.46
1304 1481 7.231925 GTGAAAAGGAACCAAGTTAATAGGGAA 59.768 37.037 0.00 0.00 0.00 3.97
1305 1482 6.717997 GTGAAAAGGAACCAAGTTAATAGGGA 59.282 38.462 0.00 0.00 0.00 4.20
1306 1483 6.719829 AGTGAAAAGGAACCAAGTTAATAGGG 59.280 38.462 0.00 0.00 0.00 3.53
1307 1484 7.761038 AGTGAAAAGGAACCAAGTTAATAGG 57.239 36.000 0.00 0.00 0.00 2.57
1310 1487 8.585018 CCATTAGTGAAAAGGAACCAAGTTAAT 58.415 33.333 0.00 0.00 0.00 1.40
1311 1488 7.470841 GCCATTAGTGAAAAGGAACCAAGTTAA 60.471 37.037 0.00 0.00 0.00 2.01
1312 1489 6.015772 GCCATTAGTGAAAAGGAACCAAGTTA 60.016 38.462 0.00 0.00 0.00 2.24
1313 1490 5.221441 GCCATTAGTGAAAAGGAACCAAGTT 60.221 40.000 0.00 0.00 0.00 2.66
1314 1491 4.280929 GCCATTAGTGAAAAGGAACCAAGT 59.719 41.667 0.00 0.00 0.00 3.16
1315 1492 4.321974 GGCCATTAGTGAAAAGGAACCAAG 60.322 45.833 0.00 0.00 0.00 3.61
1316 1493 3.576550 GGCCATTAGTGAAAAGGAACCAA 59.423 43.478 0.00 0.00 0.00 3.67
1317 1494 3.161866 GGCCATTAGTGAAAAGGAACCA 58.838 45.455 0.00 0.00 0.00 3.67
1318 1495 2.496070 GGGCCATTAGTGAAAAGGAACC 59.504 50.000 4.39 0.00 0.00 3.62
1319 1496 2.496070 GGGGCCATTAGTGAAAAGGAAC 59.504 50.000 4.39 0.00 0.00 3.62
1320 1497 2.558800 GGGGGCCATTAGTGAAAAGGAA 60.559 50.000 4.39 0.00 0.00 3.36
1321 1498 1.006639 GGGGGCCATTAGTGAAAAGGA 59.993 52.381 4.39 0.00 0.00 3.36
1322 1499 1.007118 AGGGGGCCATTAGTGAAAAGG 59.993 52.381 4.39 0.00 0.00 3.11
1323 1500 2.024941 AGAGGGGGCCATTAGTGAAAAG 60.025 50.000 4.39 0.00 0.00 2.27
1324 1501 2.000048 AGAGGGGGCCATTAGTGAAAA 59.000 47.619 4.39 0.00 0.00 2.29
1325 1502 1.681229 AGAGGGGGCCATTAGTGAAA 58.319 50.000 4.39 0.00 0.00 2.69
1326 1503 1.284785 CAAGAGGGGGCCATTAGTGAA 59.715 52.381 4.39 0.00 0.00 3.18
1327 1504 0.918983 CAAGAGGGGGCCATTAGTGA 59.081 55.000 4.39 0.00 0.00 3.41
1328 1505 0.918983 TCAAGAGGGGGCCATTAGTG 59.081 55.000 4.39 0.00 0.00 2.74
1329 1506 1.681229 TTCAAGAGGGGGCCATTAGT 58.319 50.000 4.39 0.00 0.00 2.24
1330 1507 3.319031 AATTCAAGAGGGGGCCATTAG 57.681 47.619 4.39 0.00 0.00 1.73
1331 1508 3.791545 AGTAATTCAAGAGGGGGCCATTA 59.208 43.478 4.39 0.00 0.00 1.90
1332 1509 2.587307 AGTAATTCAAGAGGGGGCCATT 59.413 45.455 4.39 0.00 0.00 3.16
1333 1510 2.175715 GAGTAATTCAAGAGGGGGCCAT 59.824 50.000 4.39 0.00 0.00 4.40
1334 1511 1.564348 GAGTAATTCAAGAGGGGGCCA 59.436 52.381 4.39 0.00 0.00 5.36
1335 1512 1.847088 AGAGTAATTCAAGAGGGGGCC 59.153 52.381 0.00 0.00 0.00 5.80
1336 1513 2.505819 TGAGAGTAATTCAAGAGGGGGC 59.494 50.000 0.00 0.00 0.00 5.80
1337 1514 4.844349 TTGAGAGTAATTCAAGAGGGGG 57.156 45.455 0.00 0.00 31.35 5.40
1359 1536 2.758089 CTGCATTCAGTGGCGGAGC 61.758 63.158 0.00 0.00 44.16 4.70
1360 1537 2.110967 CCTGCATTCAGTGGCGGAG 61.111 63.158 0.69 0.00 38.70 4.63
1361 1538 2.046023 CCTGCATTCAGTGGCGGA 60.046 61.111 0.69 0.00 38.70 5.54
1362 1539 3.818787 GCCTGCATTCAGTGGCGG 61.819 66.667 0.00 0.00 38.66 6.13
1364 1541 3.044059 GACGCCTGCATTCAGTGGC 62.044 63.158 2.38 2.38 41.76 5.01
1365 1542 2.401766 GGACGCCTGCATTCAGTGG 61.402 63.158 0.00 0.00 38.66 4.00
1366 1543 1.642037 CTGGACGCCTGCATTCAGTG 61.642 60.000 0.00 0.00 38.66 3.66
1367 1544 1.376424 CTGGACGCCTGCATTCAGT 60.376 57.895 0.00 0.00 38.66 3.41
1368 1545 1.078918 TCTGGACGCCTGCATTCAG 60.079 57.895 0.00 0.00 40.02 3.02
1369 1546 1.078918 CTCTGGACGCCTGCATTCA 60.079 57.895 0.00 0.00 0.00 2.57
1370 1547 1.817099 CCTCTGGACGCCTGCATTC 60.817 63.158 0.00 0.00 0.00 2.67
1371 1548 2.129555 AACCTCTGGACGCCTGCATT 62.130 55.000 0.00 0.00 0.00 3.56
1372 1549 2.527951 GAACCTCTGGACGCCTGCAT 62.528 60.000 0.00 0.00 0.00 3.96
1373 1550 3.240134 GAACCTCTGGACGCCTGCA 62.240 63.158 0.00 0.00 0.00 4.41
1374 1551 2.435059 GAACCTCTGGACGCCTGC 60.435 66.667 0.00 0.00 0.00 4.85
1375 1552 0.951040 GTTGAACCTCTGGACGCCTG 60.951 60.000 0.00 0.00 0.00 4.85
1376 1553 1.122019 AGTTGAACCTCTGGACGCCT 61.122 55.000 0.00 0.00 0.00 5.52
1377 1554 0.951040 CAGTTGAACCTCTGGACGCC 60.951 60.000 0.00 0.00 0.00 5.68
1378 1555 1.569479 GCAGTTGAACCTCTGGACGC 61.569 60.000 0.00 0.00 32.94 5.19
1379 1556 1.284982 CGCAGTTGAACCTCTGGACG 61.285 60.000 0.00 0.00 32.94 4.79
1380 1557 0.249911 ACGCAGTTGAACCTCTGGAC 60.250 55.000 0.00 0.00 37.78 4.02
1381 1558 0.249868 CACGCAGTTGAACCTCTGGA 60.250 55.000 0.00 0.00 41.61 3.86
1382 1559 1.230635 CCACGCAGTTGAACCTCTGG 61.231 60.000 0.00 0.00 41.61 3.86
1383 1560 1.230635 CCCACGCAGTTGAACCTCTG 61.231 60.000 0.00 0.00 41.61 3.35
1384 1561 1.071471 CCCACGCAGTTGAACCTCT 59.929 57.895 0.00 0.00 41.61 3.69
1385 1562 0.034337 TACCCACGCAGTTGAACCTC 59.966 55.000 0.00 0.00 41.61 3.85
1386 1563 0.034896 CTACCCACGCAGTTGAACCT 59.965 55.000 0.00 0.00 41.61 3.50
1387 1564 0.953960 CCTACCCACGCAGTTGAACC 60.954 60.000 0.00 0.00 41.61 3.62
1388 1565 0.034337 TCCTACCCACGCAGTTGAAC 59.966 55.000 0.00 0.00 41.61 3.18
1389 1566 0.320374 CTCCTACCCACGCAGTTGAA 59.680 55.000 0.00 0.00 41.61 2.69
1390 1567 1.972198 CTCCTACCCACGCAGTTGA 59.028 57.895 0.00 0.00 41.61 3.18
1391 1568 1.741770 GCTCCTACCCACGCAGTTG 60.742 63.158 0.00 0.00 41.61 3.16
1392 1569 1.889530 GAGCTCCTACCCACGCAGTT 61.890 60.000 0.87 0.00 41.61 3.16
1394 1571 2.496817 GAGCTCCTACCCACGCAG 59.503 66.667 0.87 0.00 0.00 5.18
1395 1572 3.449227 CGAGCTCCTACCCACGCA 61.449 66.667 8.47 0.00 0.00 5.24
1396 1573 4.208686 CCGAGCTCCTACCCACGC 62.209 72.222 8.47 0.00 0.00 5.34
1397 1574 4.208686 GCCGAGCTCCTACCCACG 62.209 72.222 8.47 0.00 0.00 4.94
1398 1575 3.851128 GGCCGAGCTCCTACCCAC 61.851 72.222 8.47 0.00 0.00 4.61
1399 1576 4.392166 TGGCCGAGCTCCTACCCA 62.392 66.667 8.47 6.67 0.00 4.51
1400 1577 3.851128 GTGGCCGAGCTCCTACCC 61.851 72.222 8.47 3.97 0.00 3.69
1401 1578 2.760385 AGTGGCCGAGCTCCTACC 60.760 66.667 8.47 7.75 0.00 3.18
1402 1579 1.605058 TTCAGTGGCCGAGCTCCTAC 61.605 60.000 8.47 3.15 0.00 3.18
1403 1580 0.687757 ATTCAGTGGCCGAGCTCCTA 60.688 55.000 8.47 0.00 0.00 2.94
1404 1581 1.992277 ATTCAGTGGCCGAGCTCCT 60.992 57.895 8.47 0.00 0.00 3.69
1405 1582 1.817099 CATTCAGTGGCCGAGCTCC 60.817 63.158 8.47 0.00 0.00 4.70
1406 1583 2.467826 GCATTCAGTGGCCGAGCTC 61.468 63.158 2.73 2.73 0.00 4.09
1407 1584 2.437359 GCATTCAGTGGCCGAGCT 60.437 61.111 0.00 0.00 0.00 4.09
1408 1585 2.747460 TGCATTCAGTGGCCGAGC 60.747 61.111 0.00 0.00 0.00 5.03
1409 1586 2.110967 CCTGCATTCAGTGGCCGAG 61.111 63.158 0.00 0.00 38.66 4.63
1410 1587 2.046023 CCTGCATTCAGTGGCCGA 60.046 61.111 0.00 0.00 38.66 5.54
1411 1588 3.818787 GCCTGCATTCAGTGGCCG 61.819 66.667 0.00 0.00 39.49 6.13
1412 1589 3.818787 CGCCTGCATTCAGTGGCC 61.819 66.667 6.80 0.00 42.15 5.36
1413 1590 3.044059 GACGCCTGCATTCAGTGGC 62.044 63.158 2.38 2.38 41.76 5.01
1414 1591 2.401766 GGACGCCTGCATTCAGTGG 61.402 63.158 0.00 0.00 38.66 4.00
1415 1592 1.642037 CTGGACGCCTGCATTCAGTG 61.642 60.000 0.00 0.00 38.66 3.66
1416 1593 1.376424 CTGGACGCCTGCATTCAGT 60.376 57.895 0.00 0.00 38.66 3.41
1417 1594 1.078918 TCTGGACGCCTGCATTCAG 60.079 57.895 0.00 0.00 40.02 3.02
1418 1595 1.078918 CTCTGGACGCCTGCATTCA 60.079 57.895 0.00 0.00 0.00 2.57
1419 1596 1.817099 CCTCTGGACGCCTGCATTC 60.817 63.158 0.00 0.00 0.00 2.67
1429 1606 0.249911 ACGCAGTTGAACCTCTGGAC 60.250 55.000 0.00 0.00 37.78 4.02
1490 1678 9.083422 TGAACTACCAAAATAATCCAATGTTGA 57.917 29.630 0.00 0.00 0.00 3.18
1507 1695 1.277842 ACGGACATGCATGAACTACCA 59.722 47.619 32.75 0.00 0.00 3.25
1524 1712 6.821665 TGAGAAAAACCATATAAAGAGGACGG 59.178 38.462 0.00 0.00 0.00 4.79
1554 1742 0.988832 AACCTATCTTTGGGGCGTGA 59.011 50.000 0.00 0.00 0.00 4.35
1809 2015 7.915293 TCACGATTAAAATAAAAGGAGCTGA 57.085 32.000 0.00 0.00 0.00 4.26
1818 2029 7.542890 ACCATGCACATCACGATTAAAATAAA 58.457 30.769 0.00 0.00 0.00 1.40
1819 2030 7.094508 ACCATGCACATCACGATTAAAATAA 57.905 32.000 0.00 0.00 0.00 1.40
1820 2031 6.691754 ACCATGCACATCACGATTAAAATA 57.308 33.333 0.00 0.00 0.00 1.40
1821 2032 5.581126 ACCATGCACATCACGATTAAAAT 57.419 34.783 0.00 0.00 0.00 1.82
1822 2033 5.159925 CAACCATGCACATCACGATTAAAA 58.840 37.500 0.00 0.00 0.00 1.52
1826 2037 2.161855 ACAACCATGCACATCACGATT 58.838 42.857 0.00 0.00 0.00 3.34
1853 2064 3.701205 TTAGTGCATGGCAAGAAGAGA 57.299 42.857 0.00 0.00 41.47 3.10
1985 3034 4.214310 AGACCCAAATGATGTGTGACAAA 58.786 39.130 0.00 0.00 0.00 2.83
2019 3068 4.374399 TGAACTTTCGGGTAACAACTCTC 58.626 43.478 0.00 0.00 39.74 3.20
2081 3132 5.453903 CTGGATTGTACTACCCAGAAGATGG 60.454 48.000 12.04 0.00 46.84 3.51
2217 3269 3.921119 TTGATGAAGTTCACCATGTGC 57.079 42.857 7.96 0.00 32.98 4.57
2252 3304 9.331282 GCTGATAGAATGATAAAACAAGTAGGT 57.669 33.333 0.00 0.00 0.00 3.08
2253 3305 9.330063 TGCTGATAGAATGATAAAACAAGTAGG 57.670 33.333 0.00 0.00 0.00 3.18
2318 3371 0.944386 GAAGCGTGCAAGGTCTGAAA 59.056 50.000 4.46 0.00 0.00 2.69
2440 3500 6.260936 ACCATGTTTCAGACACAACTCTTTAG 59.739 38.462 0.00 0.00 42.04 1.85
2442 3502 4.949856 ACCATGTTTCAGACACAACTCTTT 59.050 37.500 0.00 0.00 42.04 2.52
2461 3521 1.770749 TTTCCCCGTCGTTCCACCAT 61.771 55.000 0.00 0.00 0.00 3.55
2467 3527 5.192327 TCTATTCTATTTCCCCGTCGTTC 57.808 43.478 0.00 0.00 0.00 3.95
2474 3534 8.912614 TTATAGACCCTCTATTCTATTTCCCC 57.087 38.462 0.00 0.00 40.06 4.81
2570 3630 6.655078 AGAACTTATTTGGAAGCACATGTT 57.345 33.333 0.00 0.00 0.00 2.71
2736 3800 4.870123 AAGCAACATACAAAGCCAATGA 57.130 36.364 0.00 0.00 0.00 2.57
2748 3812 9.123709 GTCAATCGACATTTTTAAAGCAACATA 57.876 29.630 0.00 0.00 42.13 2.29
2759 3823 9.268268 TCAGTAACTTAGTCAATCGACATTTTT 57.732 29.630 0.00 0.00 45.23 1.94
2879 3951 1.917955 GATGAGACGCGATTGAACGAA 59.082 47.619 15.93 0.00 35.09 3.85
2886 3958 0.311165 CCGGTAGATGAGACGCGATT 59.689 55.000 15.93 0.00 0.00 3.34
2904 3976 2.489938 TGTGTGCATTAGGGAGAACC 57.510 50.000 0.00 0.00 40.67 3.62
2916 3988 1.002257 AATCGCCTGGATGTGTGCA 60.002 52.632 0.00 0.00 34.93 4.57
2981 4053 3.857549 TGAGAGGAATGAGACAGAACG 57.142 47.619 0.00 0.00 0.00 3.95
2987 4059 5.737063 GCTTGAGAGATGAGAGGAATGAGAC 60.737 48.000 0.00 0.00 0.00 3.36
2990 4062 4.288398 AGCTTGAGAGATGAGAGGAATGA 58.712 43.478 0.00 0.00 0.00 2.57
2992 4064 3.318839 CGAGCTTGAGAGATGAGAGGAAT 59.681 47.826 0.00 0.00 0.00 3.01
3033 4106 6.765915 AGATGAAAAGGAGAAATAAGGTGC 57.234 37.500 0.00 0.00 0.00 5.01
3040 4113 5.582665 GTGACGCTAGATGAAAAGGAGAAAT 59.417 40.000 0.00 0.00 0.00 2.17
3066 4139 2.564975 CTCGCAACTACGTCCGGT 59.435 61.111 0.00 0.00 0.00 5.28
3068 4141 2.202570 CCCTCGCAACTACGTCCG 60.203 66.667 0.00 0.00 0.00 4.79
3103 4176 3.126879 CTTGCATTCGGCTCGCCA 61.127 61.111 8.87 0.00 45.15 5.69
3105 4178 2.099062 CACTTGCATTCGGCTCGC 59.901 61.111 0.00 0.00 45.15 5.03
3110 4183 1.133253 CACTCGCACTTGCATTCGG 59.867 57.895 1.48 0.00 42.21 4.30
3113 4186 1.580845 GCCTCACTCGCACTTGCATT 61.581 55.000 1.48 0.00 42.21 3.56
3114 4187 2.037136 GCCTCACTCGCACTTGCAT 61.037 57.895 1.48 0.00 42.21 3.96
3139 4212 4.680237 TCGTCCTTGCTGCCCGTG 62.680 66.667 0.00 0.00 0.00 4.94
3195 4270 0.036952 CCTCCTCAGTTGCATCACGT 60.037 55.000 0.00 0.00 0.00 4.49
3214 4289 0.038343 TCACTAACCGGCGGTTGTAC 60.038 55.000 44.82 0.00 46.35 2.90
3222 4297 1.234615 TTGCAGCTTCACTAACCGGC 61.235 55.000 0.00 0.00 0.00 6.13
3225 4300 2.222027 ACAGTTGCAGCTTCACTAACC 58.778 47.619 0.00 0.00 0.00 2.85
3243 4318 2.571202 TGAATGTAGGCACCATCTGACA 59.429 45.455 0.00 0.00 0.00 3.58
3248 4323 2.205074 CGTCTGAATGTAGGCACCATC 58.795 52.381 0.00 0.00 0.00 3.51
3275 4350 2.116533 CCATCTCGCCATGCTTGCA 61.117 57.895 0.00 0.00 0.00 4.08
3276 4351 1.378882 TTCCATCTCGCCATGCTTGC 61.379 55.000 0.00 0.00 0.00 4.01
3278 4353 1.386533 CTTTCCATCTCGCCATGCTT 58.613 50.000 0.00 0.00 0.00 3.91
3291 4392 2.669569 GCCTGTCGCAGCTTTCCA 60.670 61.111 1.84 0.00 37.47 3.53
3302 4403 4.692228 TCCAACAAAAATCTTTGCCTGTC 58.308 39.130 0.00 0.00 44.96 3.51
3330 4431 3.252215 GTCGATCCCAACAAAACATGTCA 59.748 43.478 0.00 0.00 42.99 3.58
3332 4433 3.218453 TGTCGATCCCAACAAAACATGT 58.782 40.909 0.00 0.00 46.82 3.21
3348 4449 2.049767 TAGCACATCGCCCTGTCGA 61.050 57.895 0.00 0.00 44.04 4.20
3351 4452 2.184322 CGTAGCACATCGCCCTGT 59.816 61.111 0.00 0.00 44.04 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.