Multiple sequence alignment - TraesCS5A01G174700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G174700 chr5A 100.000 2684 0 0 1 2684 367756333 367753650 0.000000e+00 4957.0
1 TraesCS5A01G174700 chr5A 91.379 696 34 9 1 670 385312801 385313496 0.000000e+00 929.0
2 TraesCS5A01G174700 chr5A 86.078 668 46 15 34 670 554292853 554293504 0.000000e+00 675.0
3 TraesCS5A01G174700 chr5A 89.846 325 29 2 2154 2474 367754073 367753749 5.350000e-112 414.0
4 TraesCS5A01G174700 chr5A 89.846 325 29 2 2261 2585 367754180 367753860 5.350000e-112 414.0
5 TraesCS5A01G174700 chr5D 92.369 1389 76 14 670 2032 281170893 281169509 0.000000e+00 1951.0
6 TraesCS5A01G174700 chr5D 95.312 128 5 1 2029 2156 281169104 281168978 4.530000e-48 202.0
7 TraesCS5A01G174700 chr5B 92.928 1103 51 9 671 1749 319318640 319317541 0.000000e+00 1580.0
8 TraesCS5A01G174700 chr5B 82.129 526 56 24 175 676 446886811 446886300 1.490000e-112 416.0
9 TraesCS5A01G174700 chr2A 92.931 679 38 6 1 670 766335065 766335742 0.000000e+00 979.0
10 TraesCS5A01G174700 chr2A 89.331 703 42 15 1 672 670319181 670319881 0.000000e+00 852.0
11 TraesCS5A01G174700 chr2A 88.269 699 48 17 1 670 68010579 68011272 0.000000e+00 806.0
12 TraesCS5A01G174700 chr2A 91.870 123 10 0 2261 2383 17738693 17738815 3.550000e-39 172.0
13 TraesCS5A01G174700 chr2A 91.200 125 11 0 2372 2496 17738693 17738817 1.280000e-38 171.0
14 TraesCS5A01G174700 chr6A 90.346 694 42 13 1 672 549357620 549358310 0.000000e+00 887.0
15 TraesCS5A01G174700 chr6A 89.685 698 42 11 2 670 579393082 579392386 0.000000e+00 863.0
16 TraesCS5A01G174700 chr6A 89.177 693 47 14 3 673 538055148 538054462 0.000000e+00 839.0
17 TraesCS5A01G174700 chr6A 92.085 518 34 5 1 513 97602784 97602269 0.000000e+00 723.0
18 TraesCS5A01G174700 chr4A 89.444 701 45 9 1 672 66341712 66342412 0.000000e+00 857.0
19 TraesCS5A01G174700 chr4A 95.303 511 21 2 1 510 112575568 112575060 0.000000e+00 808.0
20 TraesCS5A01G174700 chr3A 89.429 700 46 13 1 673 663280362 663279664 0.000000e+00 857.0
21 TraesCS5A01G174700 chr1A 89.240 697 45 12 3 670 516380148 516379453 0.000000e+00 845.0
22 TraesCS5A01G174700 chr1A 88.922 677 57 11 1 667 469373663 469374331 0.000000e+00 819.0
23 TraesCS5A01G174700 chr1A 88.479 651 37 15 56 670 476978093 476978741 0.000000e+00 752.0
24 TraesCS5A01G174700 chr1A 85.410 658 50 17 45 672 533259720 533259079 2.250000e-180 641.0
25 TraesCS5A01G174700 chr7A 89.713 661 42 10 36 672 43533651 43532993 0.000000e+00 821.0
26 TraesCS5A01G174700 chr3B 87.914 695 55 10 1 670 807154950 807155640 0.000000e+00 791.0
27 TraesCS5A01G174700 chr3B 82.558 258 27 13 428 672 144256337 144256085 7.530000e-51 211.0
28 TraesCS5A01G174700 chr7B 88.164 659 50 11 34 670 145822441 145823093 0.000000e+00 760.0
29 TraesCS5A01G174700 chr2B 86.127 692 66 15 1 673 634960413 634959733 0.000000e+00 719.0
30 TraesCS5A01G174700 chr2B 90.244 123 12 0 2261 2383 27896446 27896568 7.690000e-36 161.0
31 TraesCS5A01G174700 chr2B 89.600 125 13 0 2372 2496 27896446 27896570 2.770000e-35 159.0
32 TraesCS5A01G174700 chr2D 92.683 123 9 0 2261 2383 15731269 15731391 7.640000e-41 178.0
33 TraesCS5A01G174700 chr2D 92.000 125 10 0 2372 2496 15731269 15731393 2.750000e-40 176.0
34 TraesCS5A01G174700 chr6B 81.818 121 16 6 1274 1391 615605784 615605901 2.200000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G174700 chr5A 367753650 367756333 2683 True 1928.333333 4957 93.230667 1 2684 3 chr5A.!!$R1 2683
1 TraesCS5A01G174700 chr5A 385312801 385313496 695 False 929.000000 929 91.379000 1 670 1 chr5A.!!$F1 669
2 TraesCS5A01G174700 chr5A 554292853 554293504 651 False 675.000000 675 86.078000 34 670 1 chr5A.!!$F2 636
3 TraesCS5A01G174700 chr5D 281168978 281170893 1915 True 1076.500000 1951 93.840500 670 2156 2 chr5D.!!$R1 1486
4 TraesCS5A01G174700 chr5B 319317541 319318640 1099 True 1580.000000 1580 92.928000 671 1749 1 chr5B.!!$R1 1078
5 TraesCS5A01G174700 chr5B 446886300 446886811 511 True 416.000000 416 82.129000 175 676 1 chr5B.!!$R2 501
6 TraesCS5A01G174700 chr2A 766335065 766335742 677 False 979.000000 979 92.931000 1 670 1 chr2A.!!$F3 669
7 TraesCS5A01G174700 chr2A 670319181 670319881 700 False 852.000000 852 89.331000 1 672 1 chr2A.!!$F2 671
8 TraesCS5A01G174700 chr2A 68010579 68011272 693 False 806.000000 806 88.269000 1 670 1 chr2A.!!$F1 669
9 TraesCS5A01G174700 chr6A 549357620 549358310 690 False 887.000000 887 90.346000 1 672 1 chr6A.!!$F1 671
10 TraesCS5A01G174700 chr6A 579392386 579393082 696 True 863.000000 863 89.685000 2 670 1 chr6A.!!$R3 668
11 TraesCS5A01G174700 chr6A 538054462 538055148 686 True 839.000000 839 89.177000 3 673 1 chr6A.!!$R2 670
12 TraesCS5A01G174700 chr6A 97602269 97602784 515 True 723.000000 723 92.085000 1 513 1 chr6A.!!$R1 512
13 TraesCS5A01G174700 chr4A 66341712 66342412 700 False 857.000000 857 89.444000 1 672 1 chr4A.!!$F1 671
14 TraesCS5A01G174700 chr4A 112575060 112575568 508 True 808.000000 808 95.303000 1 510 1 chr4A.!!$R1 509
15 TraesCS5A01G174700 chr3A 663279664 663280362 698 True 857.000000 857 89.429000 1 673 1 chr3A.!!$R1 672
16 TraesCS5A01G174700 chr1A 516379453 516380148 695 True 845.000000 845 89.240000 3 670 1 chr1A.!!$R1 667
17 TraesCS5A01G174700 chr1A 469373663 469374331 668 False 819.000000 819 88.922000 1 667 1 chr1A.!!$F1 666
18 TraesCS5A01G174700 chr1A 476978093 476978741 648 False 752.000000 752 88.479000 56 670 1 chr1A.!!$F2 614
19 TraesCS5A01G174700 chr1A 533259079 533259720 641 True 641.000000 641 85.410000 45 672 1 chr1A.!!$R2 627
20 TraesCS5A01G174700 chr7A 43532993 43533651 658 True 821.000000 821 89.713000 36 672 1 chr7A.!!$R1 636
21 TraesCS5A01G174700 chr3B 807154950 807155640 690 False 791.000000 791 87.914000 1 670 1 chr3B.!!$F1 669
22 TraesCS5A01G174700 chr7B 145822441 145823093 652 False 760.000000 760 88.164000 34 670 1 chr7B.!!$F1 636
23 TraesCS5A01G174700 chr2B 634959733 634960413 680 True 719.000000 719 86.127000 1 673 1 chr2B.!!$R1 672

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
583 678 0.321564 CGACCCATCTGACAAAGCCA 60.322 55.0 0.0 0.0 0.00 4.75 F
1213 1332 0.318441 GGCATCCTGCGAGCTATACA 59.682 55.0 0.0 0.0 46.21 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1539 1664 0.037697 CGTGGACATCCTTGGACGAA 60.038 55.0 3.12 0.0 36.82 3.85 R
2257 2806 0.038709 ACACAGAGCTGAGCGACTTC 60.039 55.0 4.21 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 89 4.299547 TCGCGTTCCAGCAGCTGT 62.300 61.111 21.26 0.00 36.85 4.40
144 154 3.053291 GGCGTGGGCGTGAATTGA 61.053 61.111 0.00 0.00 41.24 2.57
288 308 1.814527 GGCCTATGTCGACCTCGTT 59.185 57.895 14.12 0.00 40.80 3.85
322 342 4.473520 CCGGCGGCCAGTGAAGAT 62.474 66.667 20.71 0.00 0.00 2.40
583 678 0.321564 CGACCCATCTGACAAAGCCA 60.322 55.000 0.00 0.00 0.00 4.75
798 906 3.861840 ACTCGGACAGTTATCCAACATG 58.138 45.455 0.00 0.00 38.87 3.21
804 912 5.163854 CGGACAGTTATCCAACATGAAGTTC 60.164 44.000 0.00 0.00 38.74 3.01
867 975 3.620821 GTGCAGAAGTAGAAATGCTCTCC 59.379 47.826 0.00 0.00 39.42 3.71
916 1024 4.140782 TCACCTGACCTCTATATAAGGCCA 60.141 45.833 5.01 5.73 37.42 5.36
959 1067 0.600255 AGCCTTCCTTCGACAACACG 60.600 55.000 0.00 0.00 0.00 4.49
1006 1119 1.817911 TTCCCCGTACACGATGTGCA 61.818 55.000 2.76 0.00 43.02 4.57
1021 1134 2.815647 GCAGAGGGAAGTTCGCCG 60.816 66.667 15.72 6.75 0.00 6.46
1190 1309 4.468689 GCCGCTCCCCACAGGTAC 62.469 72.222 0.00 0.00 36.75 3.34
1213 1332 0.318441 GGCATCCTGCGAGCTATACA 59.682 55.000 0.00 0.00 46.21 2.29
1487 1606 0.951040 CCTGGACCGTCTTCTTGCAC 60.951 60.000 0.00 0.00 0.00 4.57
1593 1730 2.520039 CGCGCACATACTGCTGGAG 61.520 63.158 8.75 0.00 44.64 3.86
1668 1806 0.617413 ACATGGACCTCTGGAGCTTG 59.383 55.000 0.00 0.00 0.00 4.01
1786 1924 6.020121 CGTCTCGTTTCTTTTCTGTCTTACAA 60.020 38.462 0.00 0.00 0.00 2.41
1808 1946 7.147976 ACAACAGGAGAATGAGCAATTTTAAC 58.852 34.615 0.00 0.00 0.00 2.01
1833 1971 6.237861 CGAGCTTTGCTACACTACCTAAAATC 60.238 42.308 0.00 0.00 39.88 2.17
1837 1975 7.119262 GCTTTGCTACACTACCTAAAATCTTCA 59.881 37.037 0.00 0.00 0.00 3.02
1860 1998 1.394697 GACGTGTTTGGTTGATTGCG 58.605 50.000 0.00 0.00 0.00 4.85
1862 2000 1.274798 CGTGTTTGGTTGATTGCGCC 61.275 55.000 4.18 0.00 0.00 6.53
1870 2008 0.907171 GTTGATTGCGCCGATTTTCG 59.093 50.000 4.18 0.00 40.07 3.46
1878 2016 0.386731 CGCCGATTTTCGCTGGTTTT 60.387 50.000 0.00 0.00 38.82 2.43
1906 2045 3.399440 AAAGAGTCAAGCTGAGTGGAG 57.601 47.619 0.00 0.00 28.50 3.86
1908 2047 2.818921 AGAGTCAAGCTGAGTGGAGAT 58.181 47.619 0.00 0.00 28.50 2.75
1929 2070 9.449719 GGAGATTGGTTGAAGAAATAGAGTAAA 57.550 33.333 0.00 0.00 0.00 2.01
1945 2086 5.938322 AGAGTAAAATACCACGTTTGCATG 58.062 37.500 0.00 0.00 0.00 4.06
1948 2089 5.918011 AGTAAAATACCACGTTTGCATGTTG 59.082 36.000 0.00 0.00 0.00 3.33
1954 2095 1.592081 CACGTTTGCATGTTGTTTGGG 59.408 47.619 0.00 0.00 0.00 4.12
1978 2119 3.067461 GTCTGCATACGGAGTCTCTTCAT 59.933 47.826 0.00 0.00 43.93 2.57
1980 2121 3.291584 TGCATACGGAGTCTCTTCATCT 58.708 45.455 0.00 0.00 43.93 2.90
1986 2127 5.215252 ACGGAGTCTCTTCATCTTGAAAA 57.785 39.130 0.00 0.00 29.74 2.29
1987 2128 5.799213 ACGGAGTCTCTTCATCTTGAAAAT 58.201 37.500 0.00 0.00 29.74 1.82
2023 2164 0.250038 TTGATAGCCTGGCTCGCATC 60.250 55.000 27.16 22.06 40.44 3.91
2034 2583 2.072298 GGCTCGCATCATGATTAGGAC 58.928 52.381 5.16 0.00 0.00 3.85
2056 2605 8.583296 AGGACTTAACTACTACACTTAAACCAG 58.417 37.037 0.00 0.00 0.00 4.00
2159 2708 3.857854 CGCCACTGCATGTCGCTC 61.858 66.667 0.00 0.00 43.06 5.03
2160 2709 2.743538 GCCACTGCATGTCGCTCA 60.744 61.111 0.00 0.00 43.06 4.26
2161 2710 2.747822 GCCACTGCATGTCGCTCAG 61.748 63.158 0.00 0.00 43.06 3.35
2162 2711 2.747822 CCACTGCATGTCGCTCAGC 61.748 63.158 0.00 0.00 43.06 4.26
2163 2712 1.740664 CACTGCATGTCGCTCAGCT 60.741 57.895 0.00 0.00 43.06 4.24
2164 2713 1.447489 ACTGCATGTCGCTCAGCTC 60.447 57.895 0.00 0.00 43.06 4.09
2165 2714 2.125391 TGCATGTCGCTCAGCTCC 60.125 61.111 0.00 0.00 43.06 4.70
2166 2715 2.125391 GCATGTCGCTCAGCTCCA 60.125 61.111 0.00 0.00 37.77 3.86
2167 2716 2.172372 GCATGTCGCTCAGCTCCAG 61.172 63.158 0.00 0.00 37.77 3.86
2168 2717 1.521010 CATGTCGCTCAGCTCCAGG 60.521 63.158 0.00 0.00 0.00 4.45
2169 2718 1.986757 ATGTCGCTCAGCTCCAGGT 60.987 57.895 0.00 0.00 0.00 4.00
2170 2719 1.954362 ATGTCGCTCAGCTCCAGGTC 61.954 60.000 0.00 0.00 0.00 3.85
2171 2720 3.071206 TCGCTCAGCTCCAGGTCC 61.071 66.667 0.00 0.00 0.00 4.46
2172 2721 3.385384 CGCTCAGCTCCAGGTCCA 61.385 66.667 0.00 0.00 0.00 4.02
2173 2722 2.583520 GCTCAGCTCCAGGTCCAG 59.416 66.667 0.00 0.00 0.00 3.86
2174 2723 3.028921 GCTCAGCTCCAGGTCCAGG 62.029 68.421 0.00 0.00 0.00 4.45
2175 2724 3.005539 TCAGCTCCAGGTCCAGGC 61.006 66.667 0.00 0.00 0.00 4.85
2176 2725 4.106925 CAGCTCCAGGTCCAGGCC 62.107 72.222 0.00 0.00 0.00 5.19
2194 2743 4.729918 GCCCACCTGGTCCTGCTG 62.730 72.222 0.00 0.00 36.04 4.41
2195 2744 4.729918 CCCACCTGGTCCTGCTGC 62.730 72.222 0.00 0.00 0.00 5.25
2196 2745 3.644606 CCACCTGGTCCTGCTGCT 61.645 66.667 0.00 0.00 0.00 4.24
2197 2746 2.359602 CACCTGGTCCTGCTGCTG 60.360 66.667 0.00 0.00 0.00 4.41
2198 2747 4.341783 ACCTGGTCCTGCTGCTGC 62.342 66.667 8.89 8.89 40.20 5.25
2200 2749 4.694233 CTGGTCCTGCTGCTGCGT 62.694 66.667 11.21 0.00 43.34 5.24
2201 2750 4.687215 TGGTCCTGCTGCTGCGTC 62.687 66.667 11.21 1.43 43.34 5.19
2227 2776 2.268280 CTGCAGGACAGCCTCTGG 59.732 66.667 5.57 0.00 44.80 3.86
2228 2777 3.324930 TGCAGGACAGCCTCTGGG 61.325 66.667 0.00 0.00 44.80 4.45
2238 2787 2.575993 CCTCTGGGCTGACGACAG 59.424 66.667 10.66 10.66 45.91 3.51
2246 2795 3.108289 CTGACGACAGCAGGCGTG 61.108 66.667 17.23 0.00 41.34 5.34
2247 2796 3.848347 CTGACGACAGCAGGCGTGT 62.848 63.158 17.23 0.00 41.34 4.49
2248 2797 3.406361 GACGACAGCAGGCGTGTG 61.406 66.667 17.23 7.70 41.34 3.82
2260 2809 2.805353 CGTGTGCCCGTCGAGAAG 60.805 66.667 0.00 0.00 0.00 2.85
2261 2810 2.338984 GTGTGCCCGTCGAGAAGT 59.661 61.111 0.00 0.00 0.00 3.01
2262 2811 1.733399 GTGTGCCCGTCGAGAAGTC 60.733 63.158 0.00 0.00 0.00 3.01
2264 2813 4.415332 TGCCCGTCGAGAAGTCGC 62.415 66.667 0.00 0.00 46.39 5.19
2265 2814 4.117661 GCCCGTCGAGAAGTCGCT 62.118 66.667 0.00 0.00 46.39 4.93
2266 2815 2.100603 CCCGTCGAGAAGTCGCTC 59.899 66.667 0.00 0.00 46.39 5.03
2267 2816 2.687805 CCCGTCGAGAAGTCGCTCA 61.688 63.158 0.00 0.00 46.39 4.26
2268 2817 1.226156 CCGTCGAGAAGTCGCTCAG 60.226 63.158 0.00 0.00 46.39 3.35
2269 2818 1.865622 CGTCGAGAAGTCGCTCAGC 60.866 63.158 0.00 0.00 46.39 4.26
2270 2819 1.504446 GTCGAGAAGTCGCTCAGCT 59.496 57.895 0.00 0.00 46.39 4.24
2271 2820 0.522495 GTCGAGAAGTCGCTCAGCTC 60.522 60.000 0.00 0.00 46.39 4.09
2272 2821 0.675208 TCGAGAAGTCGCTCAGCTCT 60.675 55.000 0.00 0.00 46.39 4.09
2273 2822 0.523125 CGAGAAGTCGCTCAGCTCTG 60.523 60.000 0.00 0.00 39.88 3.35
2274 2823 0.525761 GAGAAGTCGCTCAGCTCTGT 59.474 55.000 0.00 0.00 35.01 3.41
2275 2824 0.243365 AGAAGTCGCTCAGCTCTGTG 59.757 55.000 0.00 0.00 0.00 3.66
2276 2825 0.038709 GAAGTCGCTCAGCTCTGTGT 60.039 55.000 0.00 0.00 0.00 3.72
2277 2826 0.038709 AAGTCGCTCAGCTCTGTGTC 60.039 55.000 0.00 0.00 0.00 3.67
2278 2827 1.445238 GTCGCTCAGCTCTGTGTCC 60.445 63.158 0.00 0.00 0.00 4.02
2279 2828 1.903404 TCGCTCAGCTCTGTGTCCA 60.903 57.895 0.00 0.00 0.00 4.02
2280 2829 1.445754 CGCTCAGCTCTGTGTCCAG 60.446 63.158 0.00 0.00 40.25 3.86
2281 2830 1.079266 GCTCAGCTCTGTGTCCAGG 60.079 63.158 0.00 0.00 39.31 4.45
2282 2831 1.079266 CTCAGCTCTGTGTCCAGGC 60.079 63.158 0.00 0.00 39.31 4.85
2283 2832 2.046507 CAGCTCTGTGTCCAGGCC 60.047 66.667 0.00 0.00 39.31 5.19
2284 2833 3.699894 AGCTCTGTGTCCAGGCCG 61.700 66.667 0.00 0.00 39.31 6.13
2286 2835 4.767255 CTCTGTGTCCAGGCCGCC 62.767 72.222 0.00 0.00 39.31 6.13
2300 2849 4.335647 CGCCCAGCAGGTCCTGTT 62.336 66.667 20.24 11.88 38.26 3.16
2301 2850 2.674380 GCCCAGCAGGTCCTGTTG 60.674 66.667 24.84 24.84 41.29 3.33
2302 2851 2.674380 CCCAGCAGGTCCTGTTGC 60.674 66.667 26.03 11.44 40.50 4.17
2306 2855 4.164258 GCAGGTCCTGTTGCTGTT 57.836 55.556 20.24 0.00 37.35 3.16
2307 2856 1.656441 GCAGGTCCTGTTGCTGTTG 59.344 57.895 20.24 0.00 37.35 3.33
2308 2857 1.656441 CAGGTCCTGTTGCTGTTGC 59.344 57.895 11.09 0.00 40.20 4.17
2309 2858 1.893808 AGGTCCTGTTGCTGTTGCG 60.894 57.895 0.00 0.00 43.34 4.85
2310 2859 2.186826 GGTCCTGTTGCTGTTGCGT 61.187 57.895 0.00 0.00 43.34 5.24
2311 2860 1.279840 GTCCTGTTGCTGTTGCGTC 59.720 57.895 0.00 0.00 43.34 5.19
2312 2861 2.243957 TCCTGTTGCTGTTGCGTCG 61.244 57.895 0.00 0.00 43.34 5.12
2313 2862 2.249309 CTGTTGCTGTTGCGTCGG 59.751 61.111 0.00 0.00 43.34 4.79
2314 2863 3.862063 CTGTTGCTGTTGCGTCGGC 62.862 63.158 5.04 5.04 43.34 5.54
2334 2883 4.341783 GGACTGCAGCACCAGCCT 62.342 66.667 15.27 0.00 43.56 4.58
2335 2884 2.282040 GACTGCAGCACCAGCCTT 60.282 61.111 15.27 0.00 43.56 4.35
2336 2885 2.282040 ACTGCAGCACCAGCCTTC 60.282 61.111 15.27 0.00 43.56 3.46
2337 2886 3.429141 CTGCAGCACCAGCCTTCG 61.429 66.667 0.00 0.00 43.56 3.79
2349 2898 2.125912 CCTTCGGGCAGACGACAG 60.126 66.667 0.00 0.23 43.37 3.51
2350 2899 2.811317 CTTCGGGCAGACGACAGC 60.811 66.667 0.00 0.00 43.37 4.40
2351 2900 3.573772 CTTCGGGCAGACGACAGCA 62.574 63.158 4.58 0.00 43.37 4.41
2352 2901 3.573772 TTCGGGCAGACGACAGCAG 62.574 63.158 4.58 0.00 43.37 4.24
2354 2903 4.008933 GGGCAGACGACAGCAGGT 62.009 66.667 4.58 0.00 0.00 4.00
2355 2904 2.740055 GGCAGACGACAGCAGGTG 60.740 66.667 4.58 0.00 0.00 4.00
2356 2905 2.029666 GCAGACGACAGCAGGTGT 59.970 61.111 4.51 4.51 44.49 4.16
2357 2906 2.313172 GCAGACGACAGCAGGTGTG 61.313 63.158 10.75 5.37 40.56 3.82
2358 2907 1.068083 CAGACGACAGCAGGTGTGT 59.932 57.895 10.75 8.66 40.56 3.72
2359 2908 1.068083 AGACGACAGCAGGTGTGTG 59.932 57.895 10.75 5.00 40.56 3.82
2360 2909 1.956170 GACGACAGCAGGTGTGTGG 60.956 63.158 10.75 1.77 40.56 4.17
2361 2910 3.349006 CGACAGCAGGTGTGTGGC 61.349 66.667 10.75 0.00 40.56 5.01
2362 2911 2.980233 GACAGCAGGTGTGTGGCC 60.980 66.667 10.75 0.00 40.56 5.36
2363 2912 4.935495 ACAGCAGGTGTGTGGCCG 62.935 66.667 3.92 0.00 38.28 6.13
2364 2913 4.935495 CAGCAGGTGTGTGGCCGT 62.935 66.667 0.00 0.00 0.00 5.68
2365 2914 4.626081 AGCAGGTGTGTGGCCGTC 62.626 66.667 0.00 0.00 0.00 4.79
2367 2916 4.293648 CAGGTGTGTGGCCGTCGA 62.294 66.667 0.00 0.00 0.00 4.20
2368 2917 3.991051 AGGTGTGTGGCCGTCGAG 61.991 66.667 0.00 0.00 0.00 4.04
2369 2918 3.986006 GGTGTGTGGCCGTCGAGA 61.986 66.667 0.00 0.00 0.00 4.04
2370 2919 2.028484 GTGTGTGGCCGTCGAGAA 59.972 61.111 0.00 0.00 0.00 2.87
2371 2920 2.022129 GTGTGTGGCCGTCGAGAAG 61.022 63.158 0.00 0.00 0.00 2.85
2372 2921 2.338984 GTGTGGCCGTCGAGAAGT 59.661 61.111 0.00 0.00 0.00 3.01
2373 2922 1.733399 GTGTGGCCGTCGAGAAGTC 60.733 63.158 0.00 0.00 0.00 3.01
2375 2924 4.415332 TGGCCGTCGAGAAGTCGC 62.415 66.667 0.00 0.00 46.39 5.19
2376 2925 4.117661 GGCCGTCGAGAAGTCGCT 62.118 66.667 0.00 0.00 46.39 4.93
2377 2926 2.577378 GCCGTCGAGAAGTCGCTC 60.577 66.667 0.00 0.00 46.39 5.03
2378 2927 2.868196 CCGTCGAGAAGTCGCTCA 59.132 61.111 0.00 0.00 46.39 4.26
2379 2928 1.226156 CCGTCGAGAAGTCGCTCAG 60.226 63.158 0.00 0.00 46.39 3.35
2380 2929 1.865622 CGTCGAGAAGTCGCTCAGC 60.866 63.158 0.00 0.00 46.39 4.26
2381 2930 1.504446 GTCGAGAAGTCGCTCAGCT 59.496 57.895 0.00 0.00 46.39 4.24
2382 2931 0.522495 GTCGAGAAGTCGCTCAGCTC 60.522 60.000 0.00 0.00 46.39 4.09
2383 2932 0.675208 TCGAGAAGTCGCTCAGCTCT 60.675 55.000 0.00 0.00 46.39 4.09
2384 2933 0.523125 CGAGAAGTCGCTCAGCTCTG 60.523 60.000 0.00 0.00 39.88 3.35
2385 2934 0.525761 GAGAAGTCGCTCAGCTCTGT 59.474 55.000 0.00 0.00 35.01 3.41
2386 2935 0.243365 AGAAGTCGCTCAGCTCTGTG 59.757 55.000 0.00 0.00 0.00 3.66
2387 2936 0.038709 GAAGTCGCTCAGCTCTGTGT 60.039 55.000 0.00 0.00 0.00 3.72
2388 2937 0.038709 AAGTCGCTCAGCTCTGTGTC 60.039 55.000 0.00 0.00 0.00 3.67
2389 2938 1.445238 GTCGCTCAGCTCTGTGTCC 60.445 63.158 0.00 0.00 0.00 4.02
2390 2939 1.903404 TCGCTCAGCTCTGTGTCCA 60.903 57.895 0.00 0.00 0.00 4.02
2391 2940 1.445754 CGCTCAGCTCTGTGTCCAG 60.446 63.158 0.00 0.00 40.25 3.86
2392 2941 1.079266 GCTCAGCTCTGTGTCCAGG 60.079 63.158 0.00 0.00 39.31 4.45
2393 2942 1.079266 CTCAGCTCTGTGTCCAGGC 60.079 63.158 0.00 0.00 39.31 4.85
2394 2943 1.534959 TCAGCTCTGTGTCCAGGCT 60.535 57.895 0.00 0.00 42.37 4.58
2395 2944 1.375652 CAGCTCTGTGTCCAGGCTG 60.376 63.158 7.75 7.75 46.61 4.85
2396 2945 2.745492 GCTCTGTGTCCAGGCTGC 60.745 66.667 9.56 0.00 39.31 5.25
2397 2946 2.046507 CTCTGTGTCCAGGCTGCC 60.047 66.667 11.65 11.65 39.31 4.85
2398 2947 3.618780 CTCTGTGTCCAGGCTGCCC 62.619 68.421 16.57 0.00 39.31 5.36
2399 2948 3.957586 CTGTGTCCAGGCTGCCCA 61.958 66.667 16.57 2.74 34.90 5.36
2400 2949 3.914579 CTGTGTCCAGGCTGCCCAG 62.915 68.421 16.57 10.46 34.90 4.45
2410 2959 3.164269 CTGCCCAGCGGGTCCTAT 61.164 66.667 13.97 0.00 46.51 2.57
2411 2960 2.690881 TGCCCAGCGGGTCCTATT 60.691 61.111 13.97 0.00 46.51 1.73
2412 2961 2.203209 GCCCAGCGGGTCCTATTG 60.203 66.667 13.97 0.00 46.51 1.90
2413 2962 2.203209 CCCAGCGGGTCCTATTGC 60.203 66.667 1.11 0.00 38.25 3.56
2414 2963 2.746375 CCCAGCGGGTCCTATTGCT 61.746 63.158 1.11 0.00 38.25 3.91
2416 2965 2.182842 CAGCGGGTCCTATTGCTGC 61.183 63.158 11.20 0.00 46.97 5.25
2417 2966 2.190578 GCGGGTCCTATTGCTGCT 59.809 61.111 0.00 0.00 0.00 4.24
2418 2967 2.182842 GCGGGTCCTATTGCTGCTG 61.183 63.158 0.00 0.00 0.00 4.41
2419 2968 2.182842 CGGGTCCTATTGCTGCTGC 61.183 63.158 8.89 8.89 40.20 5.25
2420 2969 2.182842 GGGTCCTATTGCTGCTGCG 61.183 63.158 11.21 0.00 43.34 5.18
2421 2970 1.450312 GGTCCTATTGCTGCTGCGT 60.450 57.895 11.21 4.90 43.34 5.24
2422 2971 1.432270 GGTCCTATTGCTGCTGCGTC 61.432 60.000 11.21 0.00 43.34 5.19
2423 2972 1.519234 TCCTATTGCTGCTGCGTCG 60.519 57.895 11.21 0.00 43.34 5.12
2424 2973 2.528743 CCTATTGCTGCTGCGTCGG 61.529 63.158 11.21 5.03 43.34 4.79
2425 2974 3.160557 CTATTGCTGCTGCGTCGGC 62.161 63.158 11.21 4.02 43.34 5.54
2445 2994 4.341783 GGACTGCAGCACCAGCCT 62.342 66.667 15.27 0.00 43.56 4.58
2446 2995 2.745492 GACTGCAGCACCAGCCTC 60.745 66.667 15.27 0.00 43.56 4.70
2447 2996 4.341783 ACTGCAGCACCAGCCTCC 62.342 66.667 15.27 0.00 43.56 4.30
2460 3009 4.135153 CCTCCGGGCAGACGACAG 62.135 72.222 0.00 0.00 35.47 3.51
2461 3010 4.803426 CTCCGGGCAGACGACAGC 62.803 72.222 0.00 0.00 35.47 4.40
2465 3014 4.008933 GGGCAGACGACAGCAGGT 62.009 66.667 4.58 0.00 0.00 4.00
2466 3015 2.740055 GGCAGACGACAGCAGGTG 60.740 66.667 4.58 0.00 0.00 4.00
2467 3016 3.418068 GCAGACGACAGCAGGTGC 61.418 66.667 0.00 0.00 42.49 5.01
2482 3031 4.717629 TGCGTGGCCGTCGAGAAG 62.718 66.667 21.34 0.00 36.15 2.85
2483 3032 4.719369 GCGTGGCCGTCGAGAAGT 62.719 66.667 21.34 0.00 36.15 3.01
2484 3033 2.504244 CGTGGCCGTCGAGAAGTC 60.504 66.667 13.71 0.00 0.00 3.01
2486 3035 2.981909 TGGCCGTCGAGAAGTCGT 60.982 61.111 0.00 0.00 46.85 4.34
2487 3036 2.257676 GGCCGTCGAGAAGTCGTT 59.742 61.111 0.00 0.00 46.85 3.85
2488 3037 1.800713 GGCCGTCGAGAAGTCGTTC 60.801 63.158 0.00 0.00 46.85 3.95
2489 3038 1.081641 GCCGTCGAGAAGTCGTTCA 60.082 57.895 0.00 0.00 46.85 3.18
2490 3039 1.066114 GCCGTCGAGAAGTCGTTCAG 61.066 60.000 0.00 0.00 46.85 3.02
2491 3040 1.066114 CCGTCGAGAAGTCGTTCAGC 61.066 60.000 0.00 0.00 46.85 4.26
2492 3041 0.110147 CGTCGAGAAGTCGTTCAGCT 60.110 55.000 0.00 0.00 46.85 4.24
2493 3042 1.608822 GTCGAGAAGTCGTTCAGCTC 58.391 55.000 0.00 0.00 46.85 4.09
2494 3043 0.522180 TCGAGAAGTCGTTCAGCTCC 59.478 55.000 0.00 0.00 46.85 4.70
2495 3044 0.794981 CGAGAAGTCGTTCAGCTCCG 60.795 60.000 0.00 0.00 41.57 4.63
2496 3045 0.241481 GAGAAGTCGTTCAGCTCCGT 59.759 55.000 0.00 0.00 34.82 4.69
2497 3046 0.039074 AGAAGTCGTTCAGCTCCGTG 60.039 55.000 0.00 0.00 34.82 4.94
2498 3047 0.318784 GAAGTCGTTCAGCTCCGTGT 60.319 55.000 0.00 0.00 32.36 4.49
2499 3048 0.318784 AAGTCGTTCAGCTCCGTGTC 60.319 55.000 0.00 0.00 0.00 3.67
2500 3049 1.733399 GTCGTTCAGCTCCGTGTCC 60.733 63.158 0.00 0.00 0.00 4.02
2501 3050 2.197605 TCGTTCAGCTCCGTGTCCA 61.198 57.895 0.00 0.00 0.00 4.02
2502 3051 1.734477 CGTTCAGCTCCGTGTCCAG 60.734 63.158 0.00 0.00 0.00 3.86
2503 3052 1.374758 GTTCAGCTCCGTGTCCAGG 60.375 63.158 0.00 0.00 0.00 4.45
2504 3053 3.240134 TTCAGCTCCGTGTCCAGGC 62.240 63.158 0.00 0.00 0.00 4.85
2505 3054 3.699894 CAGCTCCGTGTCCAGGCT 61.700 66.667 0.00 0.00 0.00 4.58
2506 3055 3.699894 AGCTCCGTGTCCAGGCTG 61.700 66.667 7.75 7.75 31.68 4.85
2508 3057 4.767255 CTCCGTGTCCAGGCTGCC 62.767 72.222 11.65 11.65 0.00 4.85
2522 3071 2.845784 TGCCCAGCAGGTCATGTT 59.154 55.556 0.00 0.00 38.26 2.71
2523 3072 1.604308 TGCCCAGCAGGTCATGTTG 60.604 57.895 0.00 0.00 39.67 3.33
2524 3073 2.998279 GCCCAGCAGGTCATGTTGC 61.998 63.158 10.27 10.27 38.71 4.17
2528 3077 3.677527 GCAGGTCATGTTGCTGCT 58.322 55.556 0.00 0.00 37.35 4.24
2529 3078 1.211969 GCAGGTCATGTTGCTGCTG 59.788 57.895 0.00 0.00 37.35 4.41
2530 3079 1.211969 CAGGTCATGTTGCTGCTGC 59.788 57.895 8.89 8.89 40.20 5.25
2531 3080 2.177531 GGTCATGTTGCTGCTGCG 59.822 61.111 11.21 0.00 43.34 5.18
2532 3081 2.503375 GTCATGTTGCTGCTGCGC 60.503 61.111 11.21 0.00 43.34 6.09
2533 3082 3.740397 TCATGTTGCTGCTGCGCC 61.740 61.111 4.18 4.34 43.34 6.53
2554 3103 4.341783 AGGGACTGCAGCACCAGC 62.342 66.667 24.30 12.39 37.18 4.85
2556 3105 4.341783 GGACTGCAGCACCAGCCT 62.342 66.667 15.27 0.00 43.56 4.58
2557 3106 2.745492 GACTGCAGCACCAGCCTC 60.745 66.667 15.27 0.00 43.56 4.70
2558 3107 4.341783 ACTGCAGCACCAGCCTCC 62.342 66.667 15.27 0.00 43.56 4.30
2565 3114 3.385384 CACCAGCCTCCGAGCAGA 61.385 66.667 0.00 0.00 34.23 4.26
2566 3115 3.386237 ACCAGCCTCCGAGCAGAC 61.386 66.667 0.00 0.00 34.23 3.51
2567 3116 4.504916 CCAGCCTCCGAGCAGACG 62.505 72.222 0.00 0.00 34.23 4.18
2568 3117 3.443925 CAGCCTCCGAGCAGACGA 61.444 66.667 0.00 0.00 35.09 4.20
2569 3118 3.444805 AGCCTCCGAGCAGACGAC 61.445 66.667 0.00 0.00 35.09 4.34
2570 3119 3.749064 GCCTCCGAGCAGACGACA 61.749 66.667 0.00 0.00 35.09 4.35
2571 3120 2.487428 CCTCCGAGCAGACGACAG 59.513 66.667 0.00 0.00 35.09 3.51
2572 3121 2.336478 CCTCCGAGCAGACGACAGT 61.336 63.158 0.00 0.00 35.09 3.55
2573 3122 1.581954 CTCCGAGCAGACGACAGTT 59.418 57.895 0.00 0.00 35.09 3.16
2574 3123 0.730834 CTCCGAGCAGACGACAGTTG 60.731 60.000 0.00 0.00 35.09 3.16
2575 3124 1.734477 CCGAGCAGACGACAGTTGG 60.734 63.158 0.00 0.00 35.09 3.77
2576 3125 1.007271 CGAGCAGACGACAGTTGGT 60.007 57.895 0.00 0.00 35.09 3.67
2577 3126 1.278172 CGAGCAGACGACAGTTGGTG 61.278 60.000 0.00 0.00 35.09 4.17
2578 3127 0.249489 GAGCAGACGACAGTTGGTGT 60.249 55.000 0.00 0.00 44.49 4.16
2579 3128 0.530650 AGCAGACGACAGTTGGTGTG 60.531 55.000 0.00 0.00 40.56 3.82
2580 3129 0.810031 GCAGACGACAGTTGGTGTGT 60.810 55.000 0.00 0.00 40.56 3.72
2581 3130 0.930310 CAGACGACAGTTGGTGTGTG 59.070 55.000 0.00 0.00 40.56 3.82
2582 3131 0.179084 AGACGACAGTTGGTGTGTGG 60.179 55.000 0.00 0.00 40.56 4.17
2583 3132 1.772063 GACGACAGTTGGTGTGTGGC 61.772 60.000 0.00 0.00 40.56 5.01
2584 3133 2.542907 CGACAGTTGGTGTGTGGCC 61.543 63.158 0.00 0.00 40.56 5.36
2585 3134 1.453015 GACAGTTGGTGTGTGGCCA 60.453 57.895 0.00 0.00 40.56 5.36
2586 3135 1.724582 GACAGTTGGTGTGTGGCCAC 61.725 60.000 29.67 29.67 40.56 5.01
2587 3136 2.515991 AGTTGGTGTGTGGCCACG 60.516 61.111 30.07 0.00 44.92 4.94
2588 3137 2.515057 GTTGGTGTGTGGCCACGA 60.515 61.111 30.07 17.09 44.92 4.35
2589 3138 2.115911 GTTGGTGTGTGGCCACGAA 61.116 57.895 30.07 18.34 44.92 3.85
2590 3139 2.115911 TTGGTGTGTGGCCACGAAC 61.116 57.895 30.07 27.39 44.92 3.95
2591 3140 2.515057 GGTGTGTGGCCACGAACA 60.515 61.111 30.80 26.76 44.92 3.18
2592 3141 2.542907 GGTGTGTGGCCACGAACAG 61.543 63.158 30.80 0.00 44.92 3.16
2593 3142 2.203139 TGTGTGGCCACGAACAGG 60.203 61.111 30.07 0.00 44.92 4.00
2594 3143 2.203153 GTGTGGCCACGAACAGGT 60.203 61.111 30.07 0.00 0.00 4.00
2595 3144 2.110213 TGTGGCCACGAACAGGTC 59.890 61.111 30.07 4.19 0.00 3.85
2603 3152 2.432628 CGAACAGGTCGTGGAGCC 60.433 66.667 0.00 0.00 45.09 4.70
2604 3153 2.432628 GAACAGGTCGTGGAGCCG 60.433 66.667 0.00 0.00 0.00 5.52
2605 3154 3.222354 GAACAGGTCGTGGAGCCGT 62.222 63.158 0.00 0.00 0.00 5.68
2606 3155 2.710724 GAACAGGTCGTGGAGCCGTT 62.711 60.000 0.00 0.00 0.00 4.44
2607 3156 2.738521 CAGGTCGTGGAGCCGTTG 60.739 66.667 0.00 0.00 0.00 4.10
2608 3157 4.681978 AGGTCGTGGAGCCGTTGC 62.682 66.667 0.00 0.00 37.95 4.17
2619 3168 4.379243 CCGTTGCTGCGAGGAGGT 62.379 66.667 11.01 0.00 0.00 3.85
2620 3169 3.114616 CGTTGCTGCGAGGAGGTG 61.115 66.667 3.51 0.00 0.00 4.00
2621 3170 2.743928 GTTGCTGCGAGGAGGTGG 60.744 66.667 0.00 0.00 0.00 4.61
2622 3171 2.922503 TTGCTGCGAGGAGGTGGA 60.923 61.111 0.00 0.00 0.00 4.02
2623 3172 2.947532 TTGCTGCGAGGAGGTGGAG 61.948 63.158 0.00 0.00 0.00 3.86
2624 3173 4.828925 GCTGCGAGGAGGTGGAGC 62.829 72.222 0.00 0.00 42.29 4.70
2625 3174 4.154347 CTGCGAGGAGGTGGAGCC 62.154 72.222 0.00 0.00 37.58 4.70
2627 3176 4.459089 GCGAGGAGGTGGAGCCAC 62.459 72.222 11.18 11.18 45.49 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
141 151 4.424711 GGCGGAGTGGGGCATCAA 62.425 66.667 0.00 0.00 0.00 2.57
288 308 2.471607 GTGTCGTCGTCGTCGCTA 59.528 61.111 7.01 0.00 38.33 4.26
523 618 1.511318 CGCACCCCAAATCGTGTTCA 61.511 55.000 0.00 0.00 32.40 3.18
798 906 3.854809 CGAGAATCCTTCGACAGAACTTC 59.145 47.826 0.00 0.00 32.15 3.01
804 912 2.017782 TCTCCGAGAATCCTTCGACAG 58.982 52.381 0.00 0.00 34.02 3.51
867 975 4.205181 CGTAAAGCATCACTCATCGTAGTG 59.795 45.833 8.41 8.41 46.78 2.74
959 1067 5.054477 TGTTGTTTCAGGTAGTAGCTGTTC 58.946 41.667 24.70 17.05 43.70 3.18
1006 1119 4.083862 GGCGGCGAACTTCCCTCT 62.084 66.667 12.98 0.00 0.00 3.69
1075 1194 4.842091 CCAGCTGCCGCGCATTTC 62.842 66.667 8.66 0.00 42.32 2.17
1093 1212 1.676529 GTCAGAATCCTCATCCGTCGA 59.323 52.381 0.00 0.00 0.00 4.20
1129 1248 2.190578 GGCCATGAACTCCCGGAG 59.809 66.667 13.31 13.31 35.52 4.63
1321 1440 3.050275 GCGAGCGCCCTTGAAAGT 61.050 61.111 2.29 0.00 34.56 2.66
1323 1442 4.980805 ACGCGAGCGCCCTTGAAA 62.981 61.111 15.93 0.00 44.19 2.69
1521 1646 4.117661 GACGAGGCGCTCTCCGTT 62.118 66.667 7.64 0.00 39.30 4.44
1539 1664 0.037697 CGTGGACATCCTTGGACGAA 60.038 55.000 3.12 0.00 36.82 3.85
1580 1717 0.392193 GCAGCACTCCAGCAGTATGT 60.392 55.000 0.00 0.00 39.31 2.29
1593 1730 4.702081 ACGTCGTCCGAGCAGCAC 62.702 66.667 0.00 0.00 40.70 4.40
1639 1776 3.747976 GTCCATGTTGCCGGCCAC 61.748 66.667 26.77 24.81 0.00 5.01
1680 1818 4.887071 ACCGGATGCATGTGTTATTGTTAT 59.113 37.500 9.46 0.00 0.00 1.89
1786 1924 5.705441 TCGTTAAAATTGCTCATTCTCCTGT 59.295 36.000 0.00 0.00 0.00 4.00
1808 1946 2.656560 AGGTAGTGTAGCAAAGCTCG 57.343 50.000 0.00 0.00 40.44 5.03
1833 1971 3.127895 TCAACCAAACACGTCCTTTGAAG 59.872 43.478 14.25 4.26 31.32 3.02
1837 1975 3.736740 GCAATCAACCAAACACGTCCTTT 60.737 43.478 0.00 0.00 0.00 3.11
1860 1998 2.622546 TAAAACCAGCGAAAATCGGC 57.377 45.000 1.64 0.00 40.84 5.54
1897 2036 4.277515 TCTTCAACCAATCTCCACTCAG 57.722 45.455 0.00 0.00 0.00 3.35
1900 2039 7.020827 TCTATTTCTTCAACCAATCTCCACT 57.979 36.000 0.00 0.00 0.00 4.00
1929 2070 4.314740 AACAACATGCAAACGTGGTATT 57.685 36.364 0.00 0.00 37.10 1.89
1945 2086 2.350388 CGTATGCAGACACCCAAACAAC 60.350 50.000 12.67 0.00 0.00 3.32
1948 2089 0.802494 CCGTATGCAGACACCCAAAC 59.198 55.000 12.67 0.00 0.00 2.93
1954 2095 1.746220 AGAGACTCCGTATGCAGACAC 59.254 52.381 12.67 0.00 0.00 3.67
1986 2127 8.739972 GGCTATCAAATACCGGATGAAAATTAT 58.260 33.333 9.46 0.00 0.00 1.28
1987 2128 7.942341 AGGCTATCAAATACCGGATGAAAATTA 59.058 33.333 9.46 0.00 0.00 1.40
2002 2143 0.181114 TGCGAGCCAGGCTATCAAAT 59.819 50.000 16.16 0.00 39.88 2.32
2034 2583 8.086522 TGCTCTGGTTTAAGTGTAGTAGTTAAG 58.913 37.037 0.00 0.00 36.00 1.85
2156 2705 2.583520 CTGGACCTGGAGCTGAGC 59.416 66.667 0.00 0.00 0.00 4.26
2157 2706 3.028921 GCCTGGACCTGGAGCTGAG 62.029 68.421 21.06 0.00 0.00 3.35
2158 2707 3.005539 GCCTGGACCTGGAGCTGA 61.006 66.667 21.06 0.00 0.00 4.26
2159 2708 4.106925 GGCCTGGACCTGGAGCTG 62.107 72.222 21.06 0.00 0.00 4.24
2177 2726 4.729918 CAGCAGGACCAGGTGGGC 62.730 72.222 8.14 0.00 44.61 5.36
2178 2727 4.729918 GCAGCAGGACCAGGTGGG 62.730 72.222 16.73 0.00 44.81 4.61
2179 2728 3.644606 AGCAGCAGGACCAGGTGG 61.645 66.667 16.73 0.00 42.17 4.61
2180 2729 2.359602 CAGCAGCAGGACCAGGTG 60.360 66.667 11.47 11.47 37.53 4.00
2181 2730 4.341783 GCAGCAGCAGGACCAGGT 62.342 66.667 0.00 0.00 41.58 4.00
2183 2732 4.694233 ACGCAGCAGCAGGACCAG 62.694 66.667 0.82 0.00 42.27 4.00
2184 2733 4.687215 GACGCAGCAGCAGGACCA 62.687 66.667 0.82 0.00 42.27 4.02
2203 2752 4.767255 CTGTCCTGCAGTCCCCGC 62.767 72.222 13.81 0.00 40.27 6.13
2204 2753 4.767255 GCTGTCCTGCAGTCCCCG 62.767 72.222 13.81 0.00 46.64 5.73
2205 2754 4.416738 GGCTGTCCTGCAGTCCCC 62.417 72.222 13.81 1.75 43.72 4.81
2209 2758 2.591072 CCAGAGGCTGTCCTGCAGT 61.591 63.158 13.81 0.00 46.64 4.40
2210 2759 2.268280 CCAGAGGCTGTCCTGCAG 59.732 66.667 6.78 6.78 44.46 4.41
2211 2760 3.324930 CCCAGAGGCTGTCCTGCA 61.325 66.667 0.00 0.00 44.46 4.41
2221 2770 2.575993 CTGTCGTCAGCCCAGAGG 59.424 66.667 0.00 0.00 34.79 3.69
2229 2778 3.108289 CACGCCTGCTGTCGTCAG 61.108 66.667 5.22 5.22 43.87 3.51
2230 2779 3.911698 ACACGCCTGCTGTCGTCA 61.912 61.111 0.00 0.00 36.73 4.35
2231 2780 3.406361 CACACGCCTGCTGTCGTC 61.406 66.667 0.00 0.00 36.73 4.20
2243 2792 2.805353 CTTCTCGACGGGCACACG 60.805 66.667 0.00 0.00 40.31 4.49
2244 2793 1.733399 GACTTCTCGACGGGCACAC 60.733 63.158 0.00 0.00 0.00 3.82
2245 2794 2.649034 GACTTCTCGACGGGCACA 59.351 61.111 0.00 0.00 0.00 4.57
2246 2795 2.504244 CGACTTCTCGACGGGCAC 60.504 66.667 0.00 0.00 43.06 5.01
2247 2796 4.415332 GCGACTTCTCGACGGGCA 62.415 66.667 0.00 0.00 43.06 5.36
2248 2797 4.117661 AGCGACTTCTCGACGGGC 62.118 66.667 0.00 0.00 43.06 6.13
2249 2798 2.100603 GAGCGACTTCTCGACGGG 59.899 66.667 0.00 0.00 43.06 5.28
2250 2799 1.226156 CTGAGCGACTTCTCGACGG 60.226 63.158 0.00 0.00 43.06 4.79
2251 2800 1.865622 GCTGAGCGACTTCTCGACG 60.866 63.158 0.00 0.00 43.06 5.12
2252 2801 0.522495 GAGCTGAGCGACTTCTCGAC 60.522 60.000 0.00 0.00 43.06 4.20
2253 2802 0.675208 AGAGCTGAGCGACTTCTCGA 60.675 55.000 0.00 0.00 43.06 4.04
2254 2803 0.523125 CAGAGCTGAGCGACTTCTCG 60.523 60.000 0.00 0.00 43.28 4.04
2255 2804 0.525761 ACAGAGCTGAGCGACTTCTC 59.474 55.000 4.21 0.00 0.00 2.87
2256 2805 0.243365 CACAGAGCTGAGCGACTTCT 59.757 55.000 4.21 0.00 0.00 2.85
2257 2806 0.038709 ACACAGAGCTGAGCGACTTC 60.039 55.000 4.21 0.00 0.00 3.01
2258 2807 0.038709 GACACAGAGCTGAGCGACTT 60.039 55.000 4.21 0.00 0.00 3.01
2259 2808 1.583986 GACACAGAGCTGAGCGACT 59.416 57.895 4.21 0.00 0.00 4.18
2260 2809 1.445238 GGACACAGAGCTGAGCGAC 60.445 63.158 4.21 0.00 0.00 5.19
2261 2810 1.903404 TGGACACAGAGCTGAGCGA 60.903 57.895 4.21 0.00 0.00 4.93
2262 2811 2.653115 TGGACACAGAGCTGAGCG 59.347 61.111 4.21 0.00 0.00 5.03
2283 2832 4.335647 AACAGGACCTGCTGGGCG 62.336 66.667 21.95 1.50 44.25 6.13
2284 2833 2.674380 CAACAGGACCTGCTGGGC 60.674 66.667 21.95 11.27 41.93 5.36
2285 2834 2.674380 GCAACAGGACCTGCTGGG 60.674 66.667 23.21 11.40 41.89 4.45
2286 2835 2.433446 AGCAACAGGACCTGCTGG 59.567 61.111 23.21 13.63 46.97 4.85
2289 2838 1.656441 CAACAGCAACAGGACCTGC 59.344 57.895 21.95 8.83 38.91 4.85
2290 2839 1.656441 GCAACAGCAACAGGACCTG 59.344 57.895 20.45 20.45 37.52 4.00
2291 2840 1.893808 CGCAACAGCAACAGGACCT 60.894 57.895 0.00 0.00 0.00 3.85
2292 2841 2.117941 GACGCAACAGCAACAGGACC 62.118 60.000 0.00 0.00 0.00 4.46
2293 2842 1.279840 GACGCAACAGCAACAGGAC 59.720 57.895 0.00 0.00 0.00 3.85
2294 2843 2.243957 CGACGCAACAGCAACAGGA 61.244 57.895 0.00 0.00 0.00 3.86
2295 2844 2.249309 CGACGCAACAGCAACAGG 59.751 61.111 0.00 0.00 0.00 4.00
2296 2845 2.249309 CCGACGCAACAGCAACAG 59.751 61.111 0.00 0.00 0.00 3.16
2297 2846 3.947841 GCCGACGCAACAGCAACA 61.948 61.111 0.00 0.00 34.03 3.33
2317 2866 3.857309 AAGGCTGGTGCTGCAGTCC 62.857 63.158 16.64 17.85 39.59 3.85
2318 2867 2.282040 AAGGCTGGTGCTGCAGTC 60.282 61.111 16.64 8.39 39.59 3.51
2319 2868 2.282040 GAAGGCTGGTGCTGCAGT 60.282 61.111 16.64 0.00 39.59 4.40
2320 2869 3.429141 CGAAGGCTGGTGCTGCAG 61.429 66.667 10.11 10.11 39.59 4.41
2333 2882 2.811317 GCTGTCGTCTGCCCGAAG 60.811 66.667 0.21 0.00 38.80 3.79
2334 2883 3.573772 CTGCTGTCGTCTGCCCGAA 62.574 63.158 8.83 0.00 38.80 4.30
2335 2884 4.056125 CTGCTGTCGTCTGCCCGA 62.056 66.667 8.83 0.00 37.65 5.14
2337 2886 4.008933 ACCTGCTGTCGTCTGCCC 62.009 66.667 8.83 0.00 37.65 5.36
2338 2887 2.740055 CACCTGCTGTCGTCTGCC 60.740 66.667 8.83 0.00 37.65 4.85
2339 2888 2.029666 ACACCTGCTGTCGTCTGC 59.970 61.111 4.67 4.67 38.66 4.26
2340 2889 1.068083 ACACACCTGCTGTCGTCTG 59.932 57.895 0.00 0.00 0.00 3.51
2341 2890 1.068083 CACACACCTGCTGTCGTCT 59.932 57.895 0.00 0.00 0.00 4.18
2342 2891 1.956170 CCACACACCTGCTGTCGTC 60.956 63.158 0.00 0.00 0.00 4.20
2343 2892 2.108976 CCACACACCTGCTGTCGT 59.891 61.111 0.00 0.00 0.00 4.34
2344 2893 3.349006 GCCACACACCTGCTGTCG 61.349 66.667 0.00 0.00 0.00 4.35
2345 2894 2.980233 GGCCACACACCTGCTGTC 60.980 66.667 0.00 0.00 0.00 3.51
2346 2895 4.935495 CGGCCACACACCTGCTGT 62.935 66.667 2.24 0.00 0.00 4.40
2347 2896 4.935495 ACGGCCACACACCTGCTG 62.935 66.667 2.24 0.00 37.40 4.41
2348 2897 4.626081 GACGGCCACACACCTGCT 62.626 66.667 2.24 0.00 0.00 4.24
2350 2899 4.293648 TCGACGGCCACACACCTG 62.294 66.667 2.24 0.00 0.00 4.00
2351 2900 3.991051 CTCGACGGCCACACACCT 61.991 66.667 2.24 0.00 0.00 4.00
2352 2901 3.509137 TTCTCGACGGCCACACACC 62.509 63.158 2.24 0.00 0.00 4.16
2353 2902 2.022129 CTTCTCGACGGCCACACAC 61.022 63.158 2.24 0.00 0.00 3.82
2354 2903 2.338620 CTTCTCGACGGCCACACA 59.661 61.111 2.24 0.00 0.00 3.72
2355 2904 1.733399 GACTTCTCGACGGCCACAC 60.733 63.158 2.24 0.00 0.00 3.82
2356 2905 2.649034 GACTTCTCGACGGCCACA 59.351 61.111 2.24 0.00 0.00 4.17
2357 2906 2.504244 CGACTTCTCGACGGCCAC 60.504 66.667 2.24 0.00 43.06 5.01
2358 2907 4.415332 GCGACTTCTCGACGGCCA 62.415 66.667 2.24 0.00 43.06 5.36
2359 2908 4.117661 AGCGACTTCTCGACGGCC 62.118 66.667 0.00 0.00 43.06 6.13
2360 2909 2.577378 GAGCGACTTCTCGACGGC 60.577 66.667 0.00 0.00 43.06 5.68
2361 2910 1.226156 CTGAGCGACTTCTCGACGG 60.226 63.158 0.00 0.00 43.06 4.79
2362 2911 1.865622 GCTGAGCGACTTCTCGACG 60.866 63.158 0.00 0.00 43.06 5.12
2363 2912 0.522495 GAGCTGAGCGACTTCTCGAC 60.522 60.000 0.00 0.00 43.06 4.20
2364 2913 0.675208 AGAGCTGAGCGACTTCTCGA 60.675 55.000 0.00 0.00 43.06 4.04
2365 2914 0.523125 CAGAGCTGAGCGACTTCTCG 60.523 60.000 0.00 0.00 43.28 4.04
2366 2915 0.525761 ACAGAGCTGAGCGACTTCTC 59.474 55.000 4.21 0.00 0.00 2.87
2367 2916 0.243365 CACAGAGCTGAGCGACTTCT 59.757 55.000 4.21 0.00 0.00 2.85
2368 2917 0.038709 ACACAGAGCTGAGCGACTTC 60.039 55.000 4.21 0.00 0.00 3.01
2369 2918 0.038709 GACACAGAGCTGAGCGACTT 60.039 55.000 4.21 0.00 0.00 3.01
2370 2919 1.583986 GACACAGAGCTGAGCGACT 59.416 57.895 4.21 0.00 0.00 4.18
2371 2920 1.445238 GGACACAGAGCTGAGCGAC 60.445 63.158 4.21 0.00 0.00 5.19
2372 2921 1.903404 TGGACACAGAGCTGAGCGA 60.903 57.895 4.21 0.00 0.00 4.93
2373 2922 2.653115 TGGACACAGAGCTGAGCG 59.347 61.111 4.21 0.00 0.00 5.03
2382 2931 3.914579 CTGGGCAGCCTGGACACAG 62.915 68.421 12.43 4.99 44.51 3.66
2383 2932 3.957586 CTGGGCAGCCTGGACACA 61.958 66.667 12.43 0.00 0.00 3.72
2397 2946 1.524621 CAGCAATAGGACCCGCTGG 60.525 63.158 12.68 0.00 46.37 4.85
2398 2947 4.131376 CAGCAATAGGACCCGCTG 57.869 61.111 8.03 8.03 45.17 5.18
2399 2948 2.190578 GCAGCAATAGGACCCGCT 59.809 61.111 0.00 0.00 34.29 5.52
2400 2949 2.182842 CAGCAGCAATAGGACCCGC 61.183 63.158 0.00 0.00 0.00 6.13
2401 2950 2.182842 GCAGCAGCAATAGGACCCG 61.183 63.158 0.00 0.00 41.58 5.28
2402 2951 2.182842 CGCAGCAGCAATAGGACCC 61.183 63.158 0.82 0.00 42.27 4.46
2403 2952 1.432270 GACGCAGCAGCAATAGGACC 61.432 60.000 0.82 0.00 42.27 4.46
2404 2953 1.756375 CGACGCAGCAGCAATAGGAC 61.756 60.000 0.82 0.00 42.27 3.85
2405 2954 1.519234 CGACGCAGCAGCAATAGGA 60.519 57.895 0.82 0.00 42.27 2.94
2406 2955 2.528743 CCGACGCAGCAGCAATAGG 61.529 63.158 0.82 0.00 42.27 2.57
2407 2956 3.009140 CCGACGCAGCAGCAATAG 58.991 61.111 0.82 0.00 42.27 1.73
2408 2957 3.195002 GCCGACGCAGCAGCAATA 61.195 61.111 0.82 0.00 42.27 1.90
2428 2977 4.341783 AGGCTGGTGCTGCAGTCC 62.342 66.667 16.64 17.85 39.59 3.85
2429 2978 2.745492 GAGGCTGGTGCTGCAGTC 60.745 66.667 16.64 8.39 39.59 3.51
2430 2979 4.341783 GGAGGCTGGTGCTGCAGT 62.342 66.667 16.64 0.00 39.59 4.40
2444 2993 4.803426 GCTGTCGTCTGCCCGGAG 62.803 72.222 0.73 0.00 33.40 4.63
2448 2997 4.008933 ACCTGCTGTCGTCTGCCC 62.009 66.667 8.83 0.00 37.65 5.36
2449 2998 2.740055 CACCTGCTGTCGTCTGCC 60.740 66.667 8.83 0.00 37.65 4.85
2450 2999 3.418068 GCACCTGCTGTCGTCTGC 61.418 66.667 4.67 4.67 38.21 4.26
2451 3000 3.108289 CGCACCTGCTGTCGTCTG 61.108 66.667 0.00 0.00 39.32 3.51
2452 3001 3.606662 ACGCACCTGCTGTCGTCT 61.607 61.111 0.00 0.00 39.32 4.18
2453 3002 3.406361 CACGCACCTGCTGTCGTC 61.406 66.667 0.00 0.00 39.32 4.20
2454 3003 4.969196 CCACGCACCTGCTGTCGT 62.969 66.667 0.00 0.00 39.32 4.34
2465 3014 4.717629 CTTCTCGACGGCCACGCA 62.718 66.667 13.43 1.49 46.04 5.24
2466 3015 4.719369 ACTTCTCGACGGCCACGC 62.719 66.667 13.43 0.00 46.04 5.34
2468 3017 2.504244 CGACTTCTCGACGGCCAC 60.504 66.667 2.24 0.00 43.06 5.01
2469 3018 2.467946 GAACGACTTCTCGACGGCCA 62.468 60.000 2.24 0.00 43.06 5.36
2470 3019 1.800713 GAACGACTTCTCGACGGCC 60.801 63.158 0.00 0.00 43.06 6.13
2471 3020 1.066114 CTGAACGACTTCTCGACGGC 61.066 60.000 0.00 0.00 43.06 5.68
2472 3021 1.066114 GCTGAACGACTTCTCGACGG 61.066 60.000 0.00 0.00 43.06 4.79
2473 3022 0.110147 AGCTGAACGACTTCTCGACG 60.110 55.000 0.00 0.00 43.06 5.12
2474 3023 1.608822 GAGCTGAACGACTTCTCGAC 58.391 55.000 0.00 0.00 43.06 4.20
2475 3024 0.522180 GGAGCTGAACGACTTCTCGA 59.478 55.000 0.00 0.00 43.06 4.04
2476 3025 0.794981 CGGAGCTGAACGACTTCTCG 60.795 60.000 0.00 0.00 46.06 4.04
2477 3026 0.241481 ACGGAGCTGAACGACTTCTC 59.759 55.000 8.79 0.00 0.00 2.87
2478 3027 0.039074 CACGGAGCTGAACGACTTCT 60.039 55.000 8.79 0.00 0.00 2.85
2479 3028 0.318784 ACACGGAGCTGAACGACTTC 60.319 55.000 8.79 0.00 0.00 3.01
2480 3029 0.318784 GACACGGAGCTGAACGACTT 60.319 55.000 8.79 0.00 0.00 3.01
2481 3030 1.286260 GACACGGAGCTGAACGACT 59.714 57.895 8.79 0.00 0.00 4.18
2482 3031 1.733399 GGACACGGAGCTGAACGAC 60.733 63.158 8.79 1.32 0.00 4.34
2483 3032 2.142357 CTGGACACGGAGCTGAACGA 62.142 60.000 8.79 0.00 0.00 3.85
2484 3033 1.734477 CTGGACACGGAGCTGAACG 60.734 63.158 0.00 0.00 0.00 3.95
2485 3034 1.374758 CCTGGACACGGAGCTGAAC 60.375 63.158 0.00 0.00 0.00 3.18
2486 3035 3.059982 CCTGGACACGGAGCTGAA 58.940 61.111 0.00 0.00 0.00 3.02
2487 3036 3.695606 GCCTGGACACGGAGCTGA 61.696 66.667 0.00 0.00 0.00 4.26
2488 3037 3.699894 AGCCTGGACACGGAGCTG 61.700 66.667 0.00 0.00 31.19 4.24
2489 3038 3.699894 CAGCCTGGACACGGAGCT 61.700 66.667 0.00 0.00 32.10 4.09
2491 3040 4.767255 GGCAGCCTGGACACGGAG 62.767 72.222 3.29 0.00 0.00 4.63
2506 3055 2.998279 GCAACATGACCTGCTGGGC 61.998 63.158 14.82 12.09 43.36 5.36
2507 3056 1.303888 AGCAACATGACCTGCTGGG 60.304 57.895 14.82 4.64 46.97 4.45
2508 3057 4.410225 AGCAACATGACCTGCTGG 57.590 55.556 17.01 8.29 46.97 4.85
2512 3061 1.211969 GCAGCAGCAACATGACCTG 59.788 57.895 0.00 3.70 41.58 4.00
2513 3062 2.330372 CGCAGCAGCAACATGACCT 61.330 57.895 0.00 0.00 42.27 3.85
2514 3063 2.177531 CGCAGCAGCAACATGACC 59.822 61.111 0.00 0.00 42.27 4.02
2536 3085 2.359602 CTGGTGCTGCAGTCCCTG 60.360 66.667 16.64 14.67 34.12 4.45
2537 3086 4.341783 GCTGGTGCTGCAGTCCCT 62.342 66.667 16.64 0.00 36.03 4.20
2539 3088 4.341783 AGGCTGGTGCTGCAGTCC 62.342 66.667 16.64 17.85 39.59 3.85
2540 3089 2.745492 GAGGCTGGTGCTGCAGTC 60.745 66.667 16.64 8.39 39.59 3.51
2541 3090 4.341783 GGAGGCTGGTGCTGCAGT 62.342 66.667 16.64 0.00 39.59 4.40
2548 3097 3.385384 TCTGCTCGGAGGCTGGTG 61.385 66.667 7.20 0.00 33.09 4.17
2549 3098 3.386237 GTCTGCTCGGAGGCTGGT 61.386 66.667 7.20 0.00 33.09 4.00
2550 3099 4.504916 CGTCTGCTCGGAGGCTGG 62.505 72.222 7.20 0.00 33.09 4.85
2551 3100 3.443925 TCGTCTGCTCGGAGGCTG 61.444 66.667 7.20 3.93 0.00 4.85
2552 3101 3.444805 GTCGTCTGCTCGGAGGCT 61.445 66.667 7.20 0.00 0.00 4.58
2553 3102 3.691744 CTGTCGTCTGCTCGGAGGC 62.692 68.421 7.20 0.00 0.00 4.70
2554 3103 1.867919 AACTGTCGTCTGCTCGGAGG 61.868 60.000 7.20 0.00 0.00 4.30
2555 3104 0.730834 CAACTGTCGTCTGCTCGGAG 60.731 60.000 0.00 0.00 0.00 4.63
2556 3105 1.285950 CAACTGTCGTCTGCTCGGA 59.714 57.895 0.00 0.00 0.00 4.55
2557 3106 1.734477 CCAACTGTCGTCTGCTCGG 60.734 63.158 0.00 0.00 0.00 4.63
2558 3107 1.007271 ACCAACTGTCGTCTGCTCG 60.007 57.895 0.00 0.00 0.00 5.03
2559 3108 0.249489 ACACCAACTGTCGTCTGCTC 60.249 55.000 0.00 0.00 0.00 4.26
2560 3109 0.530650 CACACCAACTGTCGTCTGCT 60.531 55.000 0.00 0.00 0.00 4.24
2561 3110 0.810031 ACACACCAACTGTCGTCTGC 60.810 55.000 0.00 0.00 0.00 4.26
2562 3111 0.930310 CACACACCAACTGTCGTCTG 59.070 55.000 0.00 0.00 0.00 3.51
2563 3112 0.179084 CCACACACCAACTGTCGTCT 60.179 55.000 0.00 0.00 0.00 4.18
2564 3113 1.772063 GCCACACACCAACTGTCGTC 61.772 60.000 0.00 0.00 0.00 4.20
2565 3114 1.817941 GCCACACACCAACTGTCGT 60.818 57.895 0.00 0.00 0.00 4.34
2566 3115 2.542907 GGCCACACACCAACTGTCG 61.543 63.158 0.00 0.00 0.00 4.35
2567 3116 1.453015 TGGCCACACACCAACTGTC 60.453 57.895 0.00 0.00 33.12 3.51
2568 3117 1.752694 GTGGCCACACACCAACTGT 60.753 57.895 31.23 0.00 46.90 3.55
2569 3118 3.119193 GTGGCCACACACCAACTG 58.881 61.111 31.23 0.00 46.90 3.16
2577 3126 2.203153 ACCTGTTCGTGGCCACAC 60.203 61.111 34.16 25.40 44.23 3.82
2578 3127 2.110213 GACCTGTTCGTGGCCACA 59.890 61.111 34.16 19.11 0.00 4.17
2579 3128 3.041940 CGACCTGTTCGTGGCCAC 61.042 66.667 26.78 26.78 43.24 5.01
2587 3136 2.432628 CGGCTCCACGACCTGTTC 60.433 66.667 0.00 0.00 35.47 3.18
2588 3137 2.803817 AACGGCTCCACGACCTGTT 61.804 57.895 0.00 0.00 37.61 3.16
2589 3138 3.231736 AACGGCTCCACGACCTGT 61.232 61.111 0.00 0.00 37.61 4.00
2590 3139 2.738521 CAACGGCTCCACGACCTG 60.739 66.667 0.00 0.00 37.61 4.00
2591 3140 4.681978 GCAACGGCTCCACGACCT 62.682 66.667 0.00 0.00 37.61 3.85
2602 3151 4.379243 ACCTCCTCGCAGCAACGG 62.379 66.667 0.00 0.00 0.00 4.44
2603 3152 3.114616 CACCTCCTCGCAGCAACG 61.115 66.667 0.00 0.00 0.00 4.10
2604 3153 2.743928 CCACCTCCTCGCAGCAAC 60.744 66.667 0.00 0.00 0.00 4.17
2605 3154 2.922503 TCCACCTCCTCGCAGCAA 60.923 61.111 0.00 0.00 0.00 3.91
2606 3155 3.385384 CTCCACCTCCTCGCAGCA 61.385 66.667 0.00 0.00 0.00 4.41
2607 3156 4.828925 GCTCCACCTCCTCGCAGC 62.829 72.222 0.00 0.00 0.00 5.25
2608 3157 4.154347 GGCTCCACCTCCTCGCAG 62.154 72.222 0.00 0.00 34.51 5.18
2610 3159 4.459089 GTGGCTCCACCTCCTCGC 62.459 72.222 7.82 0.00 40.79 5.03
2644 3193 4.154347 CTCCTGCTCCCGCTCCAC 62.154 72.222 0.00 0.00 36.97 4.02
2647 3196 4.527583 CTGCTCCTGCTCCCGCTC 62.528 72.222 0.00 0.00 40.48 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.