Multiple sequence alignment - TraesCS5A01G172200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G172200 chr5A 100.000 3923 0 0 1 3923 365598426 365602348 0.000000e+00 7245.0
1 TraesCS5A01G172200 chr5A 91.269 1970 93 36 963 2885 365253457 365255394 0.000000e+00 2612.0
2 TraesCS5A01G172200 chr5A 86.601 612 57 9 3174 3766 589355586 589356191 0.000000e+00 652.0
3 TraesCS5A01G172200 chr5A 91.758 182 13 1 2999 3178 35660078 35659897 6.510000e-63 252.0
4 TraesCS5A01G172200 chr5A 91.477 176 15 0 2999 3174 101083448 101083273 3.920000e-60 243.0
5 TraesCS5A01G172200 chr5B 94.984 1934 54 24 988 2894 314276591 314278508 0.000000e+00 2994.0
6 TraesCS5A01G172200 chr5B 90.857 1214 61 28 963 2141 314194092 314192894 0.000000e+00 1581.0
7 TraesCS5A01G172200 chr5B 93.510 755 35 7 2137 2891 314192811 314192071 0.000000e+00 1110.0
8 TraesCS5A01G172200 chr5D 93.539 1981 75 32 953 2891 276924738 276926707 0.000000e+00 2900.0
9 TraesCS5A01G172200 chr5D 92.576 1980 83 35 963 2891 276917394 276919360 0.000000e+00 2784.0
10 TraesCS5A01G172200 chr5D 78.176 669 136 10 60 724 159817210 159817872 6.060000e-113 418.0
11 TraesCS5A01G172200 chr5D 77.713 691 145 9 39 725 457111904 457112589 7.840000e-112 414.0
12 TraesCS5A01G172200 chr2B 86.808 614 44 16 3177 3764 37296970 37296368 0.000000e+00 651.0
13 TraesCS5A01G172200 chr2A 86.416 611 56 9 3174 3764 118233887 118234490 0.000000e+00 643.0
14 TraesCS5A01G172200 chr2A 85.761 611 62 13 3174 3765 118246205 118245601 1.200000e-174 623.0
15 TraesCS5A01G172200 chr2A 92.079 101 6 2 3666 3765 766845100 766845199 1.470000e-29 141.0
16 TraesCS5A01G172200 chr7B 79.343 731 135 14 1 725 544485596 544486316 2.100000e-137 499.0
17 TraesCS5A01G172200 chr7B 77.756 517 94 19 1363 1870 409712037 409711533 8.240000e-77 298.0
18 TraesCS5A01G172200 chr7B 84.247 146 20 2 1362 1504 120586992 120587137 5.290000e-29 139.0
19 TraesCS5A01G172200 chr7D 78.984 728 144 9 1 724 70700439 70699717 4.560000e-134 488.0
20 TraesCS5A01G172200 chr7D 78.049 656 136 8 63 715 70062822 70063472 1.310000e-109 407.0
21 TraesCS5A01G172200 chr7D 83.591 323 50 3 2488 2809 400170104 400169784 2.290000e-77 300.0
22 TraesCS5A01G172200 chr7D 77.799 518 92 21 1363 1870 400171046 400170542 8.240000e-77 298.0
23 TraesCS5A01G172200 chr7D 75.688 654 119 19 88 724 466850141 466850771 1.380000e-74 291.0
24 TraesCS5A01G172200 chr7D 91.573 178 13 2 2999 3174 629623535 629623712 1.090000e-60 244.0
25 TraesCS5A01G172200 chr7D 91.061 179 15 1 2999 3177 54659454 54659631 1.410000e-59 241.0
26 TraesCS5A01G172200 chr7D 84.247 146 20 3 1362 1504 159736611 159736756 5.290000e-29 139.0
27 TraesCS5A01G172200 chr1A 87.893 413 36 5 3174 3578 7280396 7279990 1.280000e-129 473.0
28 TraesCS5A01G172200 chr1A 82.584 178 27 4 1577 1752 541770966 541771141 1.890000e-33 154.0
29 TraesCS5A01G172200 chr6D 78.066 693 140 9 39 724 342569194 342568507 1.010000e-115 427.0
30 TraesCS5A01G172200 chr6D 77.594 665 144 5 1 663 78902745 78902084 7.900000e-107 398.0
31 TraesCS5A01G172200 chr6D 92.090 177 13 1 2999 3175 395525587 395525762 8.420000e-62 248.0
32 TraesCS5A01G172200 chr6D 92.000 175 14 0 2999 3173 694739 694913 3.030000e-61 246.0
33 TraesCS5A01G172200 chr6D 96.970 33 1 0 1840 1872 426336790 426336822 5.480000e-04 56.5
34 TraesCS5A01G172200 chr1D 77.029 727 159 8 1 724 171666898 171667619 1.010000e-110 411.0
35 TraesCS5A01G172200 chr1D 91.525 177 14 1 2999 3175 76458432 76458607 3.920000e-60 243.0
36 TraesCS5A01G172200 chr6A 77.286 678 149 5 49 724 264942757 264943431 1.020000e-105 394.0
37 TraesCS5A01G172200 chr6A 83.553 152 20 3 3618 3764 563614001 563613850 1.900000e-28 137.0
38 TraesCS5A01G172200 chr3B 80.206 485 49 22 3321 3769 54090406 54089933 1.760000e-83 320.0
39 TraesCS5A01G172200 chr3B 79.175 485 54 23 3321 3769 54166631 54166158 3.830000e-75 292.0
40 TraesCS5A01G172200 chr3D 92.090 177 12 2 2999 3173 506177136 506177312 8.420000e-62 248.0
41 TraesCS5A01G172200 chr3D 91.525 177 15 0 2999 3175 51673537 51673713 1.090000e-60 244.0
42 TraesCS5A01G172200 chr1B 77.519 387 66 19 1364 1739 91882036 91881660 3.070000e-51 213.0
43 TraesCS5A01G172200 chr1B 82.486 177 27 4 1578 1752 608950375 608950549 6.790000e-33 152.0
44 TraesCS5A01G172200 chr7A 84.247 146 20 3 1362 1504 158395270 158395415 5.290000e-29 139.0
45 TraesCS5A01G172200 chr7A 87.912 91 9 2 3667 3756 696973682 696973771 5.360000e-19 106.0
46 TraesCS5A01G172200 chr6B 89.524 105 11 0 3661 3765 697734255 697734359 2.460000e-27 134.0
47 TraesCS5A01G172200 chr3A 87.368 95 12 0 3673 3767 54247254 54247348 4.140000e-20 110.0
48 TraesCS5A01G172200 chr4B 84.615 104 13 3 3661 3764 598375722 598375622 2.490000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G172200 chr5A 365598426 365602348 3922 False 7245.0 7245 100.0000 1 3923 1 chr5A.!!$F2 3922
1 TraesCS5A01G172200 chr5A 365253457 365255394 1937 False 2612.0 2612 91.2690 963 2885 1 chr5A.!!$F1 1922
2 TraesCS5A01G172200 chr5A 589355586 589356191 605 False 652.0 652 86.6010 3174 3766 1 chr5A.!!$F3 592
3 TraesCS5A01G172200 chr5B 314276591 314278508 1917 False 2994.0 2994 94.9840 988 2894 1 chr5B.!!$F1 1906
4 TraesCS5A01G172200 chr5B 314192071 314194092 2021 True 1345.5 1581 92.1835 963 2891 2 chr5B.!!$R1 1928
5 TraesCS5A01G172200 chr5D 276924738 276926707 1969 False 2900.0 2900 93.5390 953 2891 1 chr5D.!!$F3 1938
6 TraesCS5A01G172200 chr5D 276917394 276919360 1966 False 2784.0 2784 92.5760 963 2891 1 chr5D.!!$F2 1928
7 TraesCS5A01G172200 chr5D 159817210 159817872 662 False 418.0 418 78.1760 60 724 1 chr5D.!!$F1 664
8 TraesCS5A01G172200 chr5D 457111904 457112589 685 False 414.0 414 77.7130 39 725 1 chr5D.!!$F4 686
9 TraesCS5A01G172200 chr2B 37296368 37296970 602 True 651.0 651 86.8080 3177 3764 1 chr2B.!!$R1 587
10 TraesCS5A01G172200 chr2A 118233887 118234490 603 False 643.0 643 86.4160 3174 3764 1 chr2A.!!$F1 590
11 TraesCS5A01G172200 chr2A 118245601 118246205 604 True 623.0 623 85.7610 3174 3765 1 chr2A.!!$R1 591
12 TraesCS5A01G172200 chr7B 544485596 544486316 720 False 499.0 499 79.3430 1 725 1 chr7B.!!$F2 724
13 TraesCS5A01G172200 chr7B 409711533 409712037 504 True 298.0 298 77.7560 1363 1870 1 chr7B.!!$R1 507
14 TraesCS5A01G172200 chr7D 70699717 70700439 722 True 488.0 488 78.9840 1 724 1 chr7D.!!$R1 723
15 TraesCS5A01G172200 chr7D 70062822 70063472 650 False 407.0 407 78.0490 63 715 1 chr7D.!!$F2 652
16 TraesCS5A01G172200 chr7D 400169784 400171046 1262 True 299.0 300 80.6950 1363 2809 2 chr7D.!!$R2 1446
17 TraesCS5A01G172200 chr7D 466850141 466850771 630 False 291.0 291 75.6880 88 724 1 chr7D.!!$F4 636
18 TraesCS5A01G172200 chr6D 342568507 342569194 687 True 427.0 427 78.0660 39 724 1 chr6D.!!$R2 685
19 TraesCS5A01G172200 chr6D 78902084 78902745 661 True 398.0 398 77.5940 1 663 1 chr6D.!!$R1 662
20 TraesCS5A01G172200 chr1D 171666898 171667619 721 False 411.0 411 77.0290 1 724 1 chr1D.!!$F2 723
21 TraesCS5A01G172200 chr6A 264942757 264943431 674 False 394.0 394 77.2860 49 724 1 chr6A.!!$F1 675

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
725 751 0.104304 ATAGCTTAACGGCGACCCAG 59.896 55.0 16.62 4.77 37.29 4.45 F
1328 1382 0.248743 CCATTGCCATGCATGTCGTC 60.249 55.0 24.58 11.36 38.76 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1906 1970 0.658368 GACTCAGCAGCAGCATCATG 59.342 55.0 3.17 0.0 45.49 3.07 R
3247 3497 0.461961 GTAGATTGAGCTCGGCCACT 59.538 55.0 9.64 6.6 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 22 3.163630 GTCGTTAATGGGCCGTAGTAA 57.836 47.619 0.00 0.00 0.00 2.24
35 37 5.050091 GCCGTAGTAAATGACAGGATGAATG 60.050 44.000 0.00 0.00 39.69 2.67
50 52 3.681593 TGAATGAGGCCCAATTTGTTG 57.318 42.857 0.00 0.00 0.00 3.33
61 63 0.673437 AATTTGTTGACGGGCCACAG 59.327 50.000 4.39 0.00 0.00 3.66
75 77 1.665916 CACAGACAGGCCGAGTGTG 60.666 63.158 21.42 21.42 36.44 3.82
89 91 0.828022 AGTGTGACCACGGACTGAAA 59.172 50.000 0.00 0.00 46.56 2.69
99 102 0.740737 CGGACTGAAATTGCCCCATC 59.259 55.000 0.00 0.00 0.00 3.51
102 105 2.621407 GGACTGAAATTGCCCCATCAGA 60.621 50.000 9.08 0.00 41.38 3.27
104 107 2.309755 ACTGAAATTGCCCCATCAGAGA 59.690 45.455 9.08 0.00 41.38 3.10
110 113 0.322816 TGCCCCATCAGAGAAACAGC 60.323 55.000 0.00 0.00 0.00 4.40
112 115 0.622665 CCCCATCAGAGAAACAGCCT 59.377 55.000 0.00 0.00 0.00 4.58
127 130 3.573695 ACAGCCTAGTAACGGACCATAT 58.426 45.455 0.00 0.00 0.00 1.78
168 172 2.760092 GAGCCCAAGAATAAATGTGCCA 59.240 45.455 0.00 0.00 0.00 4.92
193 197 4.024670 AGAAGGCTGAAAGATAGTACGGT 58.975 43.478 0.00 0.00 34.07 4.83
200 204 5.578005 TGAAAGATAGTACGGTCTGGAAG 57.422 43.478 4.18 0.00 0.00 3.46
213 217 2.434359 GGAAGCGGTCCAACGGAG 60.434 66.667 4.72 0.00 46.97 4.63
229 233 2.567985 CGGAGTAATGGGCCGTTAATT 58.432 47.619 19.49 11.10 40.17 1.40
260 265 8.620116 AAAGAAAATTATTGTTGATTGTGGGG 57.380 30.769 0.00 0.00 0.00 4.96
263 268 3.951775 TTATTGTTGATTGTGGGGCAC 57.048 42.857 0.00 0.00 34.56 5.01
297 302 3.321968 GCCATTAAAGGGCCCAAAGATAG 59.678 47.826 27.56 8.85 45.87 2.08
302 307 7.147497 CCATTAAAGGGCCCAAAGATAGAAAAT 60.147 37.037 27.56 5.65 0.00 1.82
309 314 5.163612 GGCCCAAAGATAGAAAATGTCTCAC 60.164 44.000 0.00 0.00 37.84 3.51
318 323 0.680921 AAATGTCTCACATGGGCCGG 60.681 55.000 0.00 0.00 37.97 6.13
333 338 2.264480 CGGAAGACGTCATGGGCA 59.736 61.111 19.50 0.00 37.93 5.36
363 368 0.878523 CGAAAGTGACAACGGGCTGA 60.879 55.000 0.00 0.00 0.00 4.26
387 392 0.178992 ATATTGGACGGCCCACATGG 60.179 55.000 3.83 0.00 46.62 3.66
412 417 2.327081 CTCGACCGAGTTCGAAAAGA 57.673 50.000 10.96 0.00 46.95 2.52
442 468 2.183478 CCGTGAATGGGCTATATGCA 57.817 50.000 0.00 0.00 45.15 3.96
444 470 2.485426 CCGTGAATGGGCTATATGCAAG 59.515 50.000 0.00 0.00 45.15 4.01
472 498 0.605319 TAACAGGCTTTCGCTGGGTG 60.605 55.000 0.00 0.00 36.09 4.61
518 544 3.994204 AACGTGTCGGCCTTTTTAAAT 57.006 38.095 0.00 0.00 0.00 1.40
529 555 5.828299 GCCTTTTTAAATTAAATGGGCCC 57.172 39.130 17.59 17.59 38.52 5.80
572 598 1.939785 CGTGTCATAGGCGCGTCTC 60.940 63.158 20.54 2.49 35.44 3.36
580 606 2.332362 TAGGCGCGTCTCGTCCATTC 62.332 60.000 20.54 0.00 45.48 2.67
582 608 3.607987 CGCGTCTCGTCCATTCGC 61.608 66.667 0.00 0.00 42.78 4.70
584 610 2.180769 CGTCTCGTCCATTCGCCA 59.819 61.111 0.00 0.00 0.00 5.69
604 630 2.028130 AGATGACATCTGTCCCGACTC 58.972 52.381 17.27 0.00 44.15 3.36
622 648 1.594293 CGGAGCTGACACGTGGTTT 60.594 57.895 21.57 0.00 0.00 3.27
623 649 1.157870 CGGAGCTGACACGTGGTTTT 61.158 55.000 21.57 0.00 0.00 2.43
663 689 6.782298 TTTACACGTGGAAAATCGTCATTA 57.218 33.333 23.48 0.00 38.23 1.90
664 690 6.971527 TTACACGTGGAAAATCGTCATTAT 57.028 33.333 21.57 0.00 38.23 1.28
669 695 4.033587 CGTGGAAAATCGTCATTATTCGGT 59.966 41.667 0.00 0.00 0.00 4.69
691 717 3.200483 GCTGTTAACGGGTTATCGGATT 58.800 45.455 16.13 0.00 0.00 3.01
696 722 5.352016 TGTTAACGGGTTATCGGATTCAAAG 59.648 40.000 0.26 0.00 0.00 2.77
725 751 0.104304 ATAGCTTAACGGCGACCCAG 59.896 55.000 16.62 4.77 37.29 4.45
726 752 0.966875 TAGCTTAACGGCGACCCAGA 60.967 55.000 16.62 0.00 37.29 3.86
727 753 1.375013 GCTTAACGGCGACCCAGAA 60.375 57.895 16.62 0.00 0.00 3.02
728 754 1.632948 GCTTAACGGCGACCCAGAAC 61.633 60.000 16.62 0.00 0.00 3.01
729 755 1.004679 TTAACGGCGACCCAGAACC 60.005 57.895 16.62 0.00 0.00 3.62
730 756 2.453379 TTAACGGCGACCCAGAACCC 62.453 60.000 16.62 0.00 0.00 4.11
735 761 3.081409 CGACCCAGAACCCCGGAT 61.081 66.667 0.73 0.00 0.00 4.18
736 762 2.908796 GACCCAGAACCCCGGATC 59.091 66.667 0.73 0.00 0.00 3.36
737 763 3.081409 ACCCAGAACCCCGGATCG 61.081 66.667 0.73 0.00 0.00 3.69
739 765 4.547367 CCAGAACCCCGGATCGGC 62.547 72.222 0.73 0.00 46.86 5.54
740 766 4.547367 CAGAACCCCGGATCGGCC 62.547 72.222 0.73 0.00 46.86 6.13
742 768 3.873812 GAACCCCGGATCGGCCAT 61.874 66.667 0.73 0.00 46.86 4.40
743 769 3.826926 GAACCCCGGATCGGCCATC 62.827 68.421 0.73 5.04 46.86 3.51
745 771 3.872603 CCCCGGATCGGCCATCAA 61.873 66.667 0.73 0.00 46.86 2.57
746 772 2.191908 CCCGGATCGGCCATCAAA 59.808 61.111 0.73 0.00 46.86 2.69
747 773 2.186826 CCCGGATCGGCCATCAAAC 61.187 63.158 0.73 0.00 46.86 2.93
748 774 1.451207 CCGGATCGGCCATCAAACA 60.451 57.895 2.24 0.00 41.17 2.83
749 775 1.029408 CCGGATCGGCCATCAAACAA 61.029 55.000 2.24 0.00 41.17 2.83
750 776 1.024271 CGGATCGGCCATCAAACAAT 58.976 50.000 2.24 0.00 35.94 2.71
751 777 1.268692 CGGATCGGCCATCAAACAATG 60.269 52.381 2.24 0.00 35.94 2.82
752 778 1.750778 GGATCGGCCATCAAACAATGT 59.249 47.619 2.24 0.00 36.34 2.71
753 779 2.166254 GGATCGGCCATCAAACAATGTT 59.834 45.455 2.24 0.00 36.34 2.71
754 780 3.380004 GGATCGGCCATCAAACAATGTTA 59.620 43.478 2.24 0.00 36.34 2.41
755 781 4.142271 GGATCGGCCATCAAACAATGTTAA 60.142 41.667 2.24 0.00 36.34 2.01
756 782 5.451798 GGATCGGCCATCAAACAATGTTAAT 60.452 40.000 2.24 0.00 36.34 1.40
757 783 4.992688 TCGGCCATCAAACAATGTTAATC 58.007 39.130 2.24 0.00 0.00 1.75
758 784 4.111916 CGGCCATCAAACAATGTTAATCC 58.888 43.478 2.24 0.00 0.00 3.01
759 785 4.381398 CGGCCATCAAACAATGTTAATCCA 60.381 41.667 2.24 0.00 0.00 3.41
760 786 5.486526 GGCCATCAAACAATGTTAATCCAA 58.513 37.500 0.00 0.00 0.00 3.53
761 787 5.351189 GGCCATCAAACAATGTTAATCCAAC 59.649 40.000 0.00 0.00 37.67 3.77
762 788 5.062058 GCCATCAAACAATGTTAATCCAACG 59.938 40.000 0.00 0.00 40.26 4.10
763 789 5.062058 CCATCAAACAATGTTAATCCAACGC 59.938 40.000 0.00 0.00 40.26 4.84
764 790 4.551388 TCAAACAATGTTAATCCAACGCC 58.449 39.130 0.00 0.00 40.26 5.68
765 791 3.586100 AACAATGTTAATCCAACGCCC 57.414 42.857 0.00 0.00 40.26 6.13
766 792 2.802719 ACAATGTTAATCCAACGCCCT 58.197 42.857 0.00 0.00 40.26 5.19
767 793 3.958018 ACAATGTTAATCCAACGCCCTA 58.042 40.909 0.00 0.00 40.26 3.53
768 794 4.532834 ACAATGTTAATCCAACGCCCTAT 58.467 39.130 0.00 0.00 40.26 2.57
769 795 4.953579 ACAATGTTAATCCAACGCCCTATT 59.046 37.500 0.00 0.00 40.26 1.73
770 796 5.163561 ACAATGTTAATCCAACGCCCTATTG 60.164 40.000 0.00 0.00 40.26 1.90
771 797 2.685897 TGTTAATCCAACGCCCTATTGC 59.314 45.455 0.00 0.00 40.26 3.56
772 798 2.949644 GTTAATCCAACGCCCTATTGCT 59.050 45.455 0.00 0.00 0.00 3.91
773 799 2.143876 AATCCAACGCCCTATTGCTT 57.856 45.000 0.00 0.00 0.00 3.91
774 800 2.143876 ATCCAACGCCCTATTGCTTT 57.856 45.000 0.00 0.00 0.00 3.51
775 801 2.791347 TCCAACGCCCTATTGCTTTA 57.209 45.000 0.00 0.00 0.00 1.85
776 802 3.074675 TCCAACGCCCTATTGCTTTAA 57.925 42.857 0.00 0.00 0.00 1.52
777 803 2.750712 TCCAACGCCCTATTGCTTTAAC 59.249 45.455 0.00 0.00 0.00 2.01
778 804 2.477189 CCAACGCCCTATTGCTTTAACG 60.477 50.000 0.00 0.00 0.00 3.18
779 805 2.389962 ACGCCCTATTGCTTTAACGA 57.610 45.000 0.00 0.00 0.00 3.85
780 806 2.914059 ACGCCCTATTGCTTTAACGAT 58.086 42.857 0.00 0.00 0.00 3.73
781 807 2.612212 ACGCCCTATTGCTTTAACGATG 59.388 45.455 0.00 0.00 0.00 3.84
782 808 2.869801 CGCCCTATTGCTTTAACGATGA 59.130 45.455 0.00 0.00 0.00 2.92
783 809 3.059597 CGCCCTATTGCTTTAACGATGAG 60.060 47.826 0.00 0.00 0.00 2.90
784 810 3.304057 GCCCTATTGCTTTAACGATGAGC 60.304 47.826 0.00 0.00 36.95 4.26
786 812 2.458592 ATTGCTTTAACGATGAGCGC 57.541 45.000 0.00 0.00 46.04 5.92
787 813 1.438651 TTGCTTTAACGATGAGCGCT 58.561 45.000 11.27 11.27 46.04 5.92
788 814 0.999406 TGCTTTAACGATGAGCGCTC 59.001 50.000 30.42 30.42 46.04 5.03
789 815 0.999406 GCTTTAACGATGAGCGCTCA 59.001 50.000 39.63 39.63 46.04 4.26
790 816 1.393539 GCTTTAACGATGAGCGCTCAA 59.606 47.619 40.83 23.55 46.04 3.02
791 817 2.784665 GCTTTAACGATGAGCGCTCAAC 60.785 50.000 40.83 35.71 46.04 3.18
792 818 2.073117 TTAACGATGAGCGCTCAACA 57.927 45.000 40.83 21.78 46.04 3.33
793 819 2.293677 TAACGATGAGCGCTCAACAT 57.706 45.000 40.83 29.51 46.04 2.71
794 820 0.723414 AACGATGAGCGCTCAACATG 59.277 50.000 40.83 29.97 46.04 3.21
795 821 0.390340 ACGATGAGCGCTCAACATGT 60.390 50.000 40.83 30.56 46.04 3.21
796 822 0.723414 CGATGAGCGCTCAACATGTT 59.277 50.000 40.83 25.29 43.58 2.71
797 823 1.129251 CGATGAGCGCTCAACATGTTT 59.871 47.619 40.83 24.53 43.58 2.83
798 824 2.348362 CGATGAGCGCTCAACATGTTTA 59.652 45.455 40.83 17.22 43.58 2.01
799 825 3.542875 CGATGAGCGCTCAACATGTTTAG 60.543 47.826 40.83 20.46 43.58 1.85
800 826 1.464608 TGAGCGCTCAACATGTTTAGC 59.535 47.619 36.62 27.50 36.53 3.09
801 827 1.464608 GAGCGCTCAACATGTTTAGCA 59.535 47.619 32.86 9.93 39.16 3.49
802 828 2.086869 AGCGCTCAACATGTTTAGCAT 58.913 42.857 32.86 22.64 39.16 3.79
803 829 3.270027 AGCGCTCAACATGTTTAGCATA 58.730 40.909 32.86 7.63 39.16 3.14
804 830 3.063997 AGCGCTCAACATGTTTAGCATAC 59.936 43.478 32.86 24.25 39.16 2.39
805 831 3.181511 GCGCTCAACATGTTTAGCATACA 60.182 43.478 32.86 1.08 39.16 2.29
806 832 4.671508 GCGCTCAACATGTTTAGCATACAA 60.672 41.667 32.86 4.19 39.16 2.41
807 833 5.572211 CGCTCAACATGTTTAGCATACAAT 58.428 37.500 32.86 0.00 39.16 2.71
808 834 6.029607 CGCTCAACATGTTTAGCATACAATT 58.970 36.000 32.86 0.00 39.16 2.32
809 835 6.021232 CGCTCAACATGTTTAGCATACAATTG 60.021 38.462 32.86 17.17 39.16 2.32
810 836 6.808212 GCTCAACATGTTTAGCATACAATTGT 59.192 34.615 30.66 16.68 39.07 2.71
811 837 7.967854 GCTCAACATGTTTAGCATACAATTGTA 59.032 33.333 30.66 20.14 39.07 2.41
812 838 9.838975 CTCAACATGTTTAGCATACAATTGTAA 57.161 29.630 21.57 4.54 35.74 2.41
813 839 9.619316 TCAACATGTTTAGCATACAATTGTAAC 57.381 29.630 21.57 15.73 35.74 2.50
814 840 9.624697 CAACATGTTTAGCATACAATTGTAACT 57.375 29.630 21.57 21.48 35.74 2.24
819 845 9.286170 TGTTTAGCATACAATTGTAACTTACCA 57.714 29.630 21.57 11.80 33.76 3.25
938 964 9.738832 TTTTCTGCATGATATCAACATACATTG 57.261 29.630 9.99 1.93 0.00 2.82
939 965 6.905578 TCTGCATGATATCAACATACATTGC 58.094 36.000 9.99 12.47 0.00 3.56
940 966 6.487331 TCTGCATGATATCAACATACATTGCA 59.513 34.615 19.70 19.70 0.00 4.08
941 967 6.440436 TGCATGATATCAACATACATTGCAC 58.560 36.000 17.90 0.00 0.00 4.57
942 968 6.039493 TGCATGATATCAACATACATTGCACA 59.961 34.615 17.90 2.24 0.00 4.57
943 969 7.088272 GCATGATATCAACATACATTGCACAT 58.912 34.615 9.99 0.00 0.00 3.21
944 970 8.238631 GCATGATATCAACATACATTGCACATA 58.761 33.333 9.99 0.00 0.00 2.29
945 971 9.550811 CATGATATCAACATACATTGCACATAC 57.449 33.333 9.99 0.00 0.00 2.39
946 972 8.674263 TGATATCAACATACATTGCACATACA 57.326 30.769 1.98 0.00 0.00 2.29
947 973 8.558700 TGATATCAACATACATTGCACATACAC 58.441 33.333 1.98 0.00 0.00 2.90
948 974 6.756299 ATCAACATACATTGCACATACACA 57.244 33.333 0.00 0.00 0.00 3.72
949 975 6.756299 TCAACATACATTGCACATACACAT 57.244 33.333 0.00 0.00 0.00 3.21
950 976 7.155655 TCAACATACATTGCACATACACATT 57.844 32.000 0.00 0.00 0.00 2.71
951 977 7.600960 TCAACATACATTGCACATACACATTT 58.399 30.769 0.00 0.00 0.00 2.32
955 981 9.389755 ACATACATTGCACATACACATTTACTA 57.610 29.630 0.00 0.00 0.00 1.82
961 987 7.359262 TGCACATACACATTTACTACAACTC 57.641 36.000 0.00 0.00 0.00 3.01
969 995 4.349930 ACATTTACTACAACTCCCACCACT 59.650 41.667 0.00 0.00 0.00 4.00
986 1012 4.216257 CACCACTTTTCATGGAGTCGAATT 59.784 41.667 0.00 0.00 39.87 2.17
1017 1048 7.500629 TCGACCACTATATATAGTCCTACCA 57.499 40.000 20.38 3.39 41.44 3.25
1044 1086 1.082104 GCTAAGCACCAACGCACAC 60.082 57.895 0.00 0.00 0.00 3.82
1045 1087 1.781025 GCTAAGCACCAACGCACACA 61.781 55.000 0.00 0.00 0.00 3.72
1052 1094 0.884704 ACCAACGCACACATCCTGAC 60.885 55.000 0.00 0.00 0.00 3.51
1107 1149 2.418910 CCTGATCGCCGTCCTCTGT 61.419 63.158 0.00 0.00 0.00 3.41
1158 1200 3.688159 AACTACGCGGACGCCCTT 61.688 61.111 12.47 0.00 45.53 3.95
1315 1369 0.808453 GACACATGCCATGCCATTGC 60.808 55.000 4.17 0.00 38.26 3.56
1328 1382 0.248743 CCATTGCCATGCATGTCGTC 60.249 55.000 24.58 11.36 38.76 4.20
1355 1419 5.347093 CGAGAGTATATCCATTGATGTGTGC 59.653 44.000 0.00 0.00 32.18 4.57
1895 1959 5.291178 GGTAAACAACCCAACAACCATAAC 58.709 41.667 0.00 0.00 43.16 1.89
1896 1960 5.163437 GGTAAACAACCCAACAACCATAACA 60.163 40.000 0.00 0.00 43.16 2.41
1898 1962 6.732896 AAACAACCCAACAACCATAACATA 57.267 33.333 0.00 0.00 0.00 2.29
1899 1963 6.732896 AACAACCCAACAACCATAACATAA 57.267 33.333 0.00 0.00 0.00 1.90
1900 1964 6.926630 ACAACCCAACAACCATAACATAAT 57.073 33.333 0.00 0.00 0.00 1.28
1902 1966 6.723977 ACAACCCAACAACCATAACATAATCT 59.276 34.615 0.00 0.00 0.00 2.40
1903 1967 7.891183 ACAACCCAACAACCATAACATAATCTA 59.109 33.333 0.00 0.00 0.00 1.98
1904 1968 8.912988 CAACCCAACAACCATAACATAATCTAT 58.087 33.333 0.00 0.00 0.00 1.98
1905 1969 8.463930 ACCCAACAACCATAACATAATCTATG 57.536 34.615 0.00 0.00 41.88 2.23
1906 1970 7.014230 ACCCAACAACCATAACATAATCTATGC 59.986 37.037 0.00 0.00 39.79 3.14
1927 2067 1.153686 GATGCTGCTGCTGAGTCGA 60.154 57.895 17.00 0.00 40.48 4.20
1928 2068 0.530211 GATGCTGCTGCTGAGTCGAT 60.530 55.000 17.00 0.00 40.48 3.59
1929 2069 0.530211 ATGCTGCTGCTGAGTCGATC 60.530 55.000 17.00 0.00 40.48 3.69
1930 2070 2.229589 GCTGCTGCTGAGTCGATCG 61.230 63.158 9.36 9.36 36.03 3.69
1948 2088 7.597743 AGTCGATCGGAATAACCATAACATAAC 59.402 37.037 16.41 0.00 38.90 1.89
2188 2419 4.657824 ACGTACAAGGCGCACGCT 62.658 61.111 15.98 0.00 39.23 5.07
2425 2666 2.165319 AGAAGCAGGTACGTTTCCAC 57.835 50.000 11.13 4.09 0.00 4.02
2457 2698 7.505923 GCCCCTAGACAAAATATTAAGATTGGT 59.494 37.037 0.00 0.00 0.00 3.67
2458 2699 8.850156 CCCCTAGACAAAATATTAAGATTGGTG 58.150 37.037 0.00 1.27 0.00 4.17
2472 2718 1.565390 TTGGTGGAGGGAGGCTCATG 61.565 60.000 17.69 0.00 0.00 3.07
2506 2752 1.435925 CGCGCAGGTGGACTACATA 59.564 57.895 8.75 0.00 0.00 2.29
2814 3060 4.697756 CTTCTTCGCGGGGGCACA 62.698 66.667 6.13 0.00 0.00 4.57
2891 3141 7.450074 TGGTAGAACTTGAACTGTGAATGTAT 58.550 34.615 0.00 0.00 0.00 2.29
2892 3142 7.602644 TGGTAGAACTTGAACTGTGAATGTATC 59.397 37.037 0.00 0.00 0.00 2.24
2893 3143 7.602644 GGTAGAACTTGAACTGTGAATGTATCA 59.397 37.037 0.00 0.00 35.05 2.15
2934 3184 9.953565 ACCAGTATGCTAGTAATAAAGAAAACA 57.046 29.630 0.00 0.00 31.97 2.83
2940 3190 9.646522 ATGCTAGTAATAAAGAAAACATGGGAT 57.353 29.630 0.00 0.00 0.00 3.85
2948 3198 9.816354 AATAAAGAAAACATGGGATATTTTCCG 57.184 29.630 12.40 0.00 46.52 4.30
2949 3199 7.475137 AAAGAAAACATGGGATATTTTCCGA 57.525 32.000 12.40 0.00 46.52 4.55
2950 3200 7.660030 AAGAAAACATGGGATATTTTCCGAT 57.340 32.000 12.40 1.35 46.52 4.18
2951 3201 8.760980 AAGAAAACATGGGATATTTTCCGATA 57.239 30.769 12.40 0.00 46.52 2.92
2952 3202 8.940397 AGAAAACATGGGATATTTTCCGATAT 57.060 30.769 12.40 0.00 46.52 1.63
2961 3211 8.934697 TGGGATATTTTCCGATATATTCTAGGG 58.065 37.037 0.00 0.00 46.52 3.53
2962 3212 9.155785 GGGATATTTTCCGATATATTCTAGGGA 57.844 37.037 0.00 0.00 46.52 4.20
2969 3219 9.937876 TTTCCGATATATTCTAGGGAGATATGT 57.062 33.333 0.00 0.00 0.00 2.29
2970 3220 9.575868 TTCCGATATATTCTAGGGAGATATGTC 57.424 37.037 0.00 0.00 0.00 3.06
2971 3221 8.950480 TCCGATATATTCTAGGGAGATATGTCT 58.050 37.037 0.00 0.00 37.42 3.41
2978 3228 8.644374 ATTCTAGGGAGATATGTCTAGAACAC 57.356 38.462 11.50 0.00 45.62 3.32
2979 3229 7.150447 TCTAGGGAGATATGTCTAGAACACA 57.850 40.000 0.00 0.00 41.75 3.72
2980 3230 7.760607 TCTAGGGAGATATGTCTAGAACACAT 58.239 38.462 0.00 0.00 41.75 3.21
2981 3231 6.909550 AGGGAGATATGTCTAGAACACATC 57.090 41.667 0.00 0.00 41.31 3.06
3058 3308 5.728471 CATCTAAACTGATGTCCACTCTGT 58.272 41.667 0.00 0.00 39.05 3.41
3059 3309 5.808366 TCTAAACTGATGTCCACTCTGTT 57.192 39.130 0.00 0.00 36.66 3.16
3060 3310 6.174720 TCTAAACTGATGTCCACTCTGTTT 57.825 37.500 11.33 11.33 43.11 2.83
3061 3311 7.297936 TCTAAACTGATGTCCACTCTGTTTA 57.702 36.000 12.09 12.09 41.76 2.01
3062 3312 7.907389 TCTAAACTGATGTCCACTCTGTTTAT 58.093 34.615 12.70 0.00 41.75 1.40
3063 3313 6.808008 AAACTGATGTCCACTCTGTTTATG 57.192 37.500 6.54 0.00 40.65 1.90
3064 3314 4.836825 ACTGATGTCCACTCTGTTTATGG 58.163 43.478 0.00 0.00 34.58 2.74
3065 3315 4.287067 ACTGATGTCCACTCTGTTTATGGT 59.713 41.667 0.00 0.00 34.89 3.55
3066 3316 4.832248 TGATGTCCACTCTGTTTATGGTC 58.168 43.478 0.00 0.00 34.89 4.02
3067 3317 4.532126 TGATGTCCACTCTGTTTATGGTCT 59.468 41.667 0.00 0.00 34.89 3.85
3068 3318 5.719563 TGATGTCCACTCTGTTTATGGTCTA 59.280 40.000 0.00 0.00 34.89 2.59
3069 3319 6.384015 TGATGTCCACTCTGTTTATGGTCTAT 59.616 38.462 0.00 0.00 34.89 1.98
3070 3320 6.620877 TGTCCACTCTGTTTATGGTCTATT 57.379 37.500 0.00 0.00 34.89 1.73
3071 3321 7.016153 TGTCCACTCTGTTTATGGTCTATTT 57.984 36.000 0.00 0.00 34.89 1.40
3072 3322 7.458397 TGTCCACTCTGTTTATGGTCTATTTT 58.542 34.615 0.00 0.00 34.89 1.82
3073 3323 7.606456 TGTCCACTCTGTTTATGGTCTATTTTC 59.394 37.037 0.00 0.00 34.89 2.29
3074 3324 7.824779 GTCCACTCTGTTTATGGTCTATTTTCT 59.175 37.037 0.00 0.00 34.89 2.52
3075 3325 8.383175 TCCACTCTGTTTATGGTCTATTTTCTT 58.617 33.333 0.00 0.00 34.89 2.52
3076 3326 9.667107 CCACTCTGTTTATGGTCTATTTTCTTA 57.333 33.333 0.00 0.00 0.00 2.10
3107 3357 5.368256 TTTTTGCTTGTTGTTGTTGCATT 57.632 30.435 0.00 0.00 33.50 3.56
3108 3358 6.486253 TTTTTGCTTGTTGTTGTTGCATTA 57.514 29.167 0.00 0.00 33.50 1.90
3109 3359 6.674694 TTTTGCTTGTTGTTGTTGCATTAT 57.325 29.167 0.00 0.00 33.50 1.28
3110 3360 7.776933 TTTTGCTTGTTGTTGTTGCATTATA 57.223 28.000 0.00 0.00 33.50 0.98
3111 3361 7.959689 TTTGCTTGTTGTTGTTGCATTATAT 57.040 28.000 0.00 0.00 33.50 0.86
3112 3362 9.481340 TTTTGCTTGTTGTTGTTGCATTATATA 57.519 25.926 0.00 0.00 33.50 0.86
3113 3363 9.650539 TTTGCTTGTTGTTGTTGCATTATATAT 57.349 25.926 0.00 0.00 33.50 0.86
3114 3364 9.650539 TTGCTTGTTGTTGTTGCATTATATATT 57.349 25.926 0.00 0.00 33.50 1.28
3115 3365 9.650539 TGCTTGTTGTTGTTGCATTATATATTT 57.349 25.926 0.00 0.00 0.00 1.40
3116 3366 9.904647 GCTTGTTGTTGTTGCATTATATATTTG 57.095 29.630 0.00 0.00 0.00 2.32
3123 3373 9.173939 GTTGTTGCATTATATATTTGTGAGAGC 57.826 33.333 0.00 0.00 0.00 4.09
3124 3374 8.681486 TGTTGCATTATATATTTGTGAGAGCT 57.319 30.769 0.00 0.00 0.00 4.09
3125 3375 9.123902 TGTTGCATTATATATTTGTGAGAGCTT 57.876 29.630 0.00 0.00 0.00 3.74
3134 3384 9.703892 ATATATTTGTGAGAGCTTAGATGTGAC 57.296 33.333 0.00 0.00 0.00 3.67
3135 3385 4.871933 TTGTGAGAGCTTAGATGTGACA 57.128 40.909 0.00 0.00 0.00 3.58
3136 3386 5.411831 TTGTGAGAGCTTAGATGTGACAT 57.588 39.130 0.00 0.00 0.00 3.06
3137 3387 5.003692 TGTGAGAGCTTAGATGTGACATC 57.996 43.478 17.46 17.46 0.00 3.06
3138 3388 4.142071 TGTGAGAGCTTAGATGTGACATCC 60.142 45.833 21.05 6.69 0.00 3.51
3139 3389 4.099266 GTGAGAGCTTAGATGTGACATCCT 59.901 45.833 21.05 11.37 0.00 3.24
3140 3390 4.713814 TGAGAGCTTAGATGTGACATCCTT 59.286 41.667 21.05 7.22 0.00 3.36
3141 3391 5.188555 TGAGAGCTTAGATGTGACATCCTTT 59.811 40.000 21.05 7.07 0.00 3.11
3142 3392 6.381133 TGAGAGCTTAGATGTGACATCCTTTA 59.619 38.462 21.05 5.51 0.00 1.85
3143 3393 7.093333 TGAGAGCTTAGATGTGACATCCTTTAA 60.093 37.037 21.05 12.48 0.00 1.52
3144 3394 7.624549 AGAGCTTAGATGTGACATCCTTTAAA 58.375 34.615 21.05 8.00 0.00 1.52
3145 3395 8.103305 AGAGCTTAGATGTGACATCCTTTAAAA 58.897 33.333 21.05 6.46 0.00 1.52
3146 3396 8.635765 AGCTTAGATGTGACATCCTTTAAAAA 57.364 30.769 21.05 4.95 0.00 1.94
3147 3397 8.515414 AGCTTAGATGTGACATCCTTTAAAAAC 58.485 33.333 21.05 6.99 0.00 2.43
3148 3398 8.296713 GCTTAGATGTGACATCCTTTAAAAACA 58.703 33.333 21.05 0.00 0.00 2.83
3151 3401 8.641498 AGATGTGACATCCTTTAAAAACATCT 57.359 30.769 21.05 8.71 44.92 2.90
3152 3402 9.739276 AGATGTGACATCCTTTAAAAACATCTA 57.261 29.630 21.05 0.00 46.74 1.98
3153 3403 9.994432 GATGTGACATCCTTTAAAAACATCTAG 57.006 33.333 14.48 0.00 39.54 2.43
3154 3404 9.739276 ATGTGACATCCTTTAAAAACATCTAGA 57.261 29.630 0.00 0.00 0.00 2.43
3155 3405 9.739276 TGTGACATCCTTTAAAAACATCTAGAT 57.261 29.630 0.00 0.00 0.00 1.98
3156 3406 9.994432 GTGACATCCTTTAAAAACATCTAGATG 57.006 33.333 27.63 27.63 44.15 2.90
3211 3461 6.417930 GTCAGAAATACTTGAGGCAACAAAAC 59.582 38.462 0.00 0.00 41.41 2.43
3223 3473 8.815565 TGAGGCAACAAAACCTATATCAAATA 57.184 30.769 0.00 0.00 36.05 1.40
3249 3499 9.821240 ATAACTTCCATATCTCTGATCTACAGT 57.179 33.333 0.00 0.00 45.86 3.55
3253 3503 4.081752 CCATATCTCTGATCTACAGTGGCC 60.082 50.000 0.00 0.00 45.86 5.36
3276 3526 1.694696 GCTCAATCTACCTGTAGGGGG 59.305 57.143 2.53 0.00 40.27 5.40
3280 3530 3.272818 TCAATCTACCTGTAGGGGGTGTA 59.727 47.826 2.53 0.00 40.27 2.90
3318 3568 3.515901 GAGTGGAGGTCCTTGTATTCACT 59.484 47.826 0.00 1.19 37.00 3.41
3329 3579 2.106074 TATTCACTTGCAGCGGCCG 61.106 57.895 24.05 24.05 40.13 6.13
3345 3595 2.290287 CCGGTCACCCTGTGATCCA 61.290 63.158 0.00 0.00 44.63 3.41
3383 3633 3.827898 GCGAGGGGTCAGACTCCG 61.828 72.222 14.30 4.23 45.74 4.63
3387 3637 3.075641 GGGGTCAGACTCCGGGAC 61.076 72.222 2.82 0.00 0.00 4.46
3395 3645 0.178958 AGACTCCGGGACAGAACACT 60.179 55.000 0.00 0.00 0.00 3.55
3412 3662 1.067142 CACTTTCGACCGAGGGATCAA 60.067 52.381 0.00 0.00 0.00 2.57
3423 3673 2.622436 GAGGGATCAAACTCCAGAACG 58.378 52.381 0.00 0.00 37.01 3.95
3434 3684 1.079127 CCAGAACGCCTTGGATCGT 60.079 57.895 0.00 0.00 41.06 3.73
3466 3718 0.396417 ACCGAGGGATCAGACTCCAG 60.396 60.000 0.00 0.00 37.01 3.86
3467 3719 0.396417 CCGAGGGATCAGACTCCAGT 60.396 60.000 0.00 0.00 37.01 4.00
3483 3741 2.238646 TCCAGTGAAGTGAACACCTTGT 59.761 45.455 1.11 0.00 38.82 3.16
3515 3780 3.511934 CCTTTCCTGTAGGCTATAGCGAT 59.488 47.826 18.30 11.89 43.26 4.58
3551 3816 1.388174 AAGAGGACTGGAGGAGGAGA 58.612 55.000 0.00 0.00 0.00 3.71
3566 3831 1.786441 AGGAGAAGGAGATCGATCCCT 59.214 52.381 21.66 22.18 40.53 4.20
3579 3844 2.758423 TCGATCCCTGATCTCGTTTCAA 59.242 45.455 0.00 0.00 36.96 2.69
3582 3847 3.676324 GATCCCTGATCTCGTTTCAACGT 60.676 47.826 11.63 0.00 39.97 3.99
3650 3915 2.205462 AGTCCAGCCCACTCCAGT 59.795 61.111 0.00 0.00 0.00 4.00
3659 3934 1.071471 CCACTCCAGTCCAAAGCGT 59.929 57.895 0.00 0.00 0.00 5.07
3716 3994 1.388174 TGGGGCCCTCCAGAATTTTA 58.612 50.000 25.93 0.00 37.22 1.52
3721 3999 1.341976 GCCCTCCAGAATTTTAGGCCA 60.342 52.381 5.01 0.00 32.68 5.36
3756 4034 2.870035 TTTTGCACCACTGTGGGCCT 62.870 55.000 29.05 7.20 43.37 5.19
3775 4053 3.145551 GCCCTGCCATCTTGCTGG 61.146 66.667 2.33 2.33 46.57 4.85
3776 4054 2.357836 CCCTGCCATCTTGCTGGT 59.642 61.111 7.93 0.00 45.84 4.00
3777 4055 1.304713 CCCTGCCATCTTGCTGGTT 60.305 57.895 7.93 0.00 45.84 3.67
3778 4056 1.601419 CCCTGCCATCTTGCTGGTTG 61.601 60.000 7.93 0.00 45.84 3.77
3779 4057 0.896940 CCTGCCATCTTGCTGGTTGT 60.897 55.000 0.00 0.00 43.24 3.32
3780 4058 1.614051 CCTGCCATCTTGCTGGTTGTA 60.614 52.381 0.00 0.00 43.24 2.41
3781 4059 1.741706 CTGCCATCTTGCTGGTTGTAG 59.258 52.381 0.00 0.00 38.63 2.74
3782 4060 0.453390 GCCATCTTGCTGGTTGTAGC 59.547 55.000 0.00 0.00 43.95 3.58
3789 4067 2.840974 GCTGGTTGTAGCATGTCGT 58.159 52.632 0.00 0.00 43.17 4.34
3790 4068 0.721718 GCTGGTTGTAGCATGTCGTC 59.278 55.000 0.00 0.00 43.17 4.20
3791 4069 1.673033 GCTGGTTGTAGCATGTCGTCT 60.673 52.381 0.00 0.00 43.17 4.18
3792 4070 2.263077 CTGGTTGTAGCATGTCGTCTC 58.737 52.381 0.00 0.00 0.00 3.36
3793 4071 1.269166 GGTTGTAGCATGTCGTCTCG 58.731 55.000 0.00 0.00 0.00 4.04
3794 4072 1.402456 GGTTGTAGCATGTCGTCTCGT 60.402 52.381 0.00 0.00 0.00 4.18
3795 4073 1.912110 GTTGTAGCATGTCGTCTCGTC 59.088 52.381 0.00 0.00 0.00 4.20
3796 4074 1.161843 TGTAGCATGTCGTCTCGTCA 58.838 50.000 0.00 0.00 0.00 4.35
3797 4075 1.130561 TGTAGCATGTCGTCTCGTCAG 59.869 52.381 0.00 0.00 0.00 3.51
3798 4076 1.397343 GTAGCATGTCGTCTCGTCAGA 59.603 52.381 0.00 0.00 0.00 3.27
3799 4077 0.169230 AGCATGTCGTCTCGTCAGAC 59.831 55.000 0.00 0.00 45.19 3.51
3805 4083 4.628160 GTCTCGTCAGACGCAACA 57.372 55.556 18.62 0.00 42.21 3.33
3806 4084 3.108521 GTCTCGTCAGACGCAACAT 57.891 52.632 18.62 0.00 42.21 2.71
3807 4085 1.419374 GTCTCGTCAGACGCAACATT 58.581 50.000 18.62 0.00 42.21 2.71
3808 4086 1.792949 GTCTCGTCAGACGCAACATTT 59.207 47.619 18.62 0.00 42.21 2.32
3809 4087 1.792367 TCTCGTCAGACGCAACATTTG 59.208 47.619 18.62 1.30 42.21 2.32
3821 4099 3.302365 CAACATTTGCCCTCGTTGATT 57.698 42.857 0.00 0.00 40.92 2.57
3822 4100 2.988493 CAACATTTGCCCTCGTTGATTG 59.012 45.455 0.00 0.00 40.92 2.67
3823 4101 2.238521 ACATTTGCCCTCGTTGATTGT 58.761 42.857 0.00 0.00 0.00 2.71
3824 4102 3.417101 ACATTTGCCCTCGTTGATTGTA 58.583 40.909 0.00 0.00 0.00 2.41
3825 4103 3.440173 ACATTTGCCCTCGTTGATTGTAG 59.560 43.478 0.00 0.00 0.00 2.74
3826 4104 1.448985 TTGCCCTCGTTGATTGTAGC 58.551 50.000 0.00 0.00 0.00 3.58
3827 4105 0.323302 TGCCCTCGTTGATTGTAGCA 59.677 50.000 0.00 0.00 0.00 3.49
3828 4106 0.727398 GCCCTCGTTGATTGTAGCAC 59.273 55.000 0.00 0.00 0.00 4.40
3829 4107 1.943968 GCCCTCGTTGATTGTAGCACA 60.944 52.381 0.00 0.00 0.00 4.57
3830 4108 2.632377 CCCTCGTTGATTGTAGCACAT 58.368 47.619 0.00 0.00 0.00 3.21
3831 4109 2.609459 CCCTCGTTGATTGTAGCACATC 59.391 50.000 0.00 0.00 0.00 3.06
3832 4110 2.282555 CCTCGTTGATTGTAGCACATCG 59.717 50.000 0.00 0.00 0.00 3.84
3833 4111 2.923655 CTCGTTGATTGTAGCACATCGT 59.076 45.455 0.00 0.00 0.00 3.73
3834 4112 2.921121 TCGTTGATTGTAGCACATCGTC 59.079 45.455 0.00 0.00 0.00 4.20
3835 4113 2.923655 CGTTGATTGTAGCACATCGTCT 59.076 45.455 0.00 0.00 0.00 4.18
3836 4114 3.000674 CGTTGATTGTAGCACATCGTCTC 60.001 47.826 0.00 0.00 0.00 3.36
3837 4115 3.866883 TGATTGTAGCACATCGTCTCA 57.133 42.857 0.00 0.00 0.00 3.27
3838 4116 3.511699 TGATTGTAGCACATCGTCTCAC 58.488 45.455 0.00 0.00 0.00 3.51
3839 4117 2.363788 TTGTAGCACATCGTCTCACC 57.636 50.000 0.00 0.00 0.00 4.02
3840 4118 1.253100 TGTAGCACATCGTCTCACCA 58.747 50.000 0.00 0.00 0.00 4.17
3841 4119 1.202348 TGTAGCACATCGTCTCACCAG 59.798 52.381 0.00 0.00 0.00 4.00
3842 4120 1.202582 GTAGCACATCGTCTCACCAGT 59.797 52.381 0.00 0.00 0.00 4.00
3843 4121 0.037882 AGCACATCGTCTCACCAGTG 60.038 55.000 0.00 0.00 0.00 3.66
3844 4122 1.016130 GCACATCGTCTCACCAGTGG 61.016 60.000 7.91 7.91 0.00 4.00
3845 4123 1.016130 CACATCGTCTCACCAGTGGC 61.016 60.000 9.78 0.00 0.00 5.01
3846 4124 1.293179 CATCGTCTCACCAGTGGCA 59.707 57.895 9.78 0.00 0.00 4.92
3847 4125 0.320683 CATCGTCTCACCAGTGGCAA 60.321 55.000 9.78 0.00 0.00 4.52
3848 4126 0.320771 ATCGTCTCACCAGTGGCAAC 60.321 55.000 9.78 1.33 0.00 4.17
3863 4141 4.550577 TGGCAACATGCGTCATTAATAG 57.449 40.909 0.00 0.00 46.21 1.73
3864 4142 3.944650 TGGCAACATGCGTCATTAATAGT 59.055 39.130 0.00 0.00 46.21 2.12
3865 4143 4.397730 TGGCAACATGCGTCATTAATAGTT 59.602 37.500 0.00 0.00 46.21 2.24
3866 4144 4.734854 GGCAACATGCGTCATTAATAGTTG 59.265 41.667 0.00 0.00 46.21 3.16
3867 4145 5.854835 CAACATGCGTCATTAATAGTTGC 57.145 39.130 0.00 0.00 0.00 4.17
3868 4146 5.331098 CAACATGCGTCATTAATAGTTGCA 58.669 37.500 0.00 6.37 35.10 4.08
3869 4147 5.160699 ACATGCGTCATTAATAGTTGCAG 57.839 39.130 0.00 5.30 33.99 4.41
3870 4148 4.635765 ACATGCGTCATTAATAGTTGCAGT 59.364 37.500 0.00 5.72 33.99 4.40
3871 4149 5.815222 ACATGCGTCATTAATAGTTGCAGTA 59.185 36.000 0.00 0.00 33.99 2.74
3872 4150 6.483307 ACATGCGTCATTAATAGTTGCAGTAT 59.517 34.615 0.00 0.00 33.99 2.12
3873 4151 6.918892 TGCGTCATTAATAGTTGCAGTATT 57.081 33.333 8.11 8.11 0.00 1.89
3874 4152 7.315247 TGCGTCATTAATAGTTGCAGTATTT 57.685 32.000 8.28 0.00 0.00 1.40
3875 4153 8.426881 TGCGTCATTAATAGTTGCAGTATTTA 57.573 30.769 8.28 1.68 0.00 1.40
3876 4154 8.547894 TGCGTCATTAATAGTTGCAGTATTTAG 58.452 33.333 8.28 1.76 0.00 1.85
3877 4155 8.548721 GCGTCATTAATAGTTGCAGTATTTAGT 58.451 33.333 8.28 0.00 0.00 2.24
3885 4163 6.903883 AGTTGCAGTATTTAGTCATAACGG 57.096 37.500 0.00 0.00 0.00 4.44
3886 4164 6.403878 AGTTGCAGTATTTAGTCATAACGGT 58.596 36.000 0.00 0.00 0.00 4.83
3887 4165 6.877322 AGTTGCAGTATTTAGTCATAACGGTT 59.123 34.615 0.00 0.00 0.00 4.44
3888 4166 6.656314 TGCAGTATTTAGTCATAACGGTTG 57.344 37.500 3.07 0.00 0.00 3.77
3889 4167 6.167685 TGCAGTATTTAGTCATAACGGTTGT 58.832 36.000 3.07 0.00 0.00 3.32
3890 4168 7.321908 TGCAGTATTTAGTCATAACGGTTGTA 58.678 34.615 3.07 0.00 0.00 2.41
3891 4169 7.490079 TGCAGTATTTAGTCATAACGGTTGTAG 59.510 37.037 3.07 0.00 0.00 2.74
3892 4170 7.516312 GCAGTATTTAGTCATAACGGTTGTAGC 60.516 40.741 3.07 0.00 0.00 3.58
3893 4171 5.961395 ATTTAGTCATAACGGTTGTAGCG 57.039 39.130 3.07 0.00 45.69 4.26
3901 4179 3.418675 CGGTTGTAGCGTCTCATGT 57.581 52.632 0.00 0.00 33.95 3.21
3902 4180 1.710013 CGGTTGTAGCGTCTCATGTT 58.290 50.000 0.00 0.00 33.95 2.71
3903 4181 1.390123 CGGTTGTAGCGTCTCATGTTG 59.610 52.381 0.00 0.00 33.95 3.33
3904 4182 2.683968 GGTTGTAGCGTCTCATGTTGA 58.316 47.619 0.00 0.00 0.00 3.18
3905 4183 2.412089 GGTTGTAGCGTCTCATGTTGAC 59.588 50.000 10.19 10.19 0.00 3.18
3911 4189 3.664930 GTCTCATGTTGACGCTTGC 57.335 52.632 0.00 0.00 0.00 4.01
3912 4190 0.867746 GTCTCATGTTGACGCTTGCA 59.132 50.000 0.00 0.00 0.00 4.08
3913 4191 1.264020 GTCTCATGTTGACGCTTGCAA 59.736 47.619 0.00 0.00 0.00 4.08
3914 4192 2.095567 GTCTCATGTTGACGCTTGCAAT 60.096 45.455 0.00 0.00 0.00 3.56
3915 4193 3.125146 GTCTCATGTTGACGCTTGCAATA 59.875 43.478 0.00 0.00 0.00 1.90
3916 4194 3.371898 TCTCATGTTGACGCTTGCAATAG 59.628 43.478 0.00 0.00 0.00 1.73
3917 4195 3.073678 TCATGTTGACGCTTGCAATAGT 58.926 40.909 0.00 2.70 0.00 2.12
3918 4196 2.967459 TGTTGACGCTTGCAATAGTG 57.033 45.000 11.03 4.67 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 19 4.276926 GGCCTCATTCATCCTGTCATTTAC 59.723 45.833 0.00 0.00 0.00 2.01
20 22 2.423947 GGGCCTCATTCATCCTGTCATT 60.424 50.000 0.84 0.00 0.00 2.57
35 37 0.243636 CCGTCAACAAATTGGGCCTC 59.756 55.000 4.53 0.00 36.39 4.70
61 63 2.048127 GGTCACACTCGGCCTGTC 60.048 66.667 0.00 0.00 0.00 3.51
71 73 1.878953 ATTTCAGTCCGTGGTCACAC 58.121 50.000 1.90 0.00 44.23 3.82
75 77 0.521735 GGCAATTTCAGTCCGTGGTC 59.478 55.000 0.00 0.00 0.00 4.02
89 91 2.731572 CTGTTTCTCTGATGGGGCAAT 58.268 47.619 0.00 0.00 0.00 3.56
99 102 3.192844 TCCGTTACTAGGCTGTTTCTCTG 59.807 47.826 0.00 0.00 0.00 3.35
102 105 2.233186 GGTCCGTTACTAGGCTGTTTCT 59.767 50.000 0.00 0.00 0.00 2.52
104 107 1.972795 TGGTCCGTTACTAGGCTGTTT 59.027 47.619 0.00 0.00 0.00 2.83
110 113 7.223260 TGATTACATATGGTCCGTTACTAGG 57.777 40.000 7.80 0.00 0.00 3.02
112 115 7.256048 CCCTTGATTACATATGGTCCGTTACTA 60.256 40.741 7.80 0.00 0.00 1.82
127 130 4.272489 CTCATTTCCAGCCCTTGATTACA 58.728 43.478 0.00 0.00 0.00 2.41
168 172 6.324254 ACCGTACTATCTTTCAGCCTTCTAAT 59.676 38.462 0.00 0.00 0.00 1.73
178 182 4.142227 GCTTCCAGACCGTACTATCTTTCA 60.142 45.833 0.00 0.00 0.00 2.69
187 191 1.153881 GACCGCTTCCAGACCGTAC 60.154 63.158 0.00 0.00 0.00 3.67
188 192 2.345760 GGACCGCTTCCAGACCGTA 61.346 63.158 0.00 0.00 45.10 4.02
200 204 1.087771 CCATTACTCCGTTGGACCGC 61.088 60.000 0.00 0.00 31.94 5.68
204 208 1.605453 GGCCCATTACTCCGTTGGA 59.395 57.895 0.00 0.00 31.94 3.53
213 217 2.502213 GCCAATTAACGGCCCATTAC 57.498 50.000 6.49 0.00 44.22 1.89
246 251 1.786937 AAGTGCCCCACAATCAACAA 58.213 45.000 0.00 0.00 36.74 2.83
251 256 0.603065 GGTGAAAGTGCCCCACAATC 59.397 55.000 0.00 0.00 36.74 2.67
260 265 3.670377 GGCCCGTGGTGAAAGTGC 61.670 66.667 0.00 0.00 0.00 4.40
263 268 1.540267 TTAATGGCCCGTGGTGAAAG 58.460 50.000 0.00 0.00 0.00 2.62
297 302 1.133025 CGGCCCATGTGAGACATTTTC 59.867 52.381 0.00 0.00 36.53 2.29
302 307 2.184020 CTTCCGGCCCATGTGAGACA 62.184 60.000 0.00 0.00 0.00 3.41
309 314 2.511600 GACGTCTTCCGGCCCATG 60.512 66.667 8.70 0.00 39.28 3.66
318 323 2.627945 TGTATTGCCCATGACGTCTTC 58.372 47.619 17.92 0.00 0.00 2.87
333 338 4.280436 TGTCACTTTCGGTCCATGTATT 57.720 40.909 0.00 0.00 0.00 1.89
395 400 1.058404 GGTCTTTTCGAACTCGGTCG 58.942 55.000 0.00 0.00 42.48 4.79
412 417 0.746563 CATTCACGGCCCGTTATGGT 60.747 55.000 5.76 0.00 38.32 3.55
427 453 2.490903 CCTGCTTGCATATAGCCCATTC 59.509 50.000 6.42 0.00 44.83 2.67
442 468 1.971695 GCCTGTTAACGGCCTGCTT 60.972 57.895 22.83 0.00 41.73 3.91
472 498 0.949397 GGTCAAAAGTTCACGGGTCC 59.051 55.000 0.00 0.00 0.00 4.46
504 530 5.179533 GCCCATTTAATTTAAAAAGGCCGA 58.820 37.500 22.80 0.00 40.88 5.54
529 555 2.317609 CGTGGCTCGTCCCAACAAG 61.318 63.158 0.00 0.00 36.46 3.16
557 583 1.654743 GACGAGACGCGCCTATGAC 60.655 63.158 5.73 0.00 46.04 3.06
568 594 0.103208 ATCTGGCGAATGGACGAGAC 59.897 55.000 0.00 0.00 35.09 3.36
572 598 0.460109 TGTCATCTGGCGAATGGACG 60.460 55.000 0.00 0.00 0.00 4.79
584 610 2.028130 GAGTCGGGACAGATGTCATCT 58.972 52.381 9.68 9.68 46.47 2.90
600 626 1.442857 CACGTGTCAGCTCCGAGTC 60.443 63.158 7.58 0.00 0.00 3.36
604 630 1.157870 AAAACCACGTGTCAGCTCCG 61.158 55.000 15.65 0.00 0.00 4.63
622 648 5.923684 GTGTAAAATTCTCATTGGCCGAAAA 59.076 36.000 0.00 0.00 0.00 2.29
623 649 5.465935 GTGTAAAATTCTCATTGGCCGAAA 58.534 37.500 0.00 0.00 0.00 3.46
663 689 0.035739 ACCCGTTAACAGCACCGAAT 59.964 50.000 6.39 0.00 0.00 3.34
664 690 0.179051 AACCCGTTAACAGCACCGAA 60.179 50.000 6.39 0.00 0.00 4.30
669 695 1.549620 TCCGATAACCCGTTAACAGCA 59.450 47.619 6.39 0.00 0.00 4.41
691 717 1.820581 CTATCGGGTCCGGCTTTGA 59.179 57.895 9.68 0.00 40.25 2.69
696 722 0.599466 GTTAAGCTATCGGGTCCGGC 60.599 60.000 9.68 5.37 40.25 6.13
731 757 1.024271 ATTGTTTGATGGCCGATCCG 58.976 50.000 0.00 0.00 37.80 4.18
732 758 1.750778 ACATTGTTTGATGGCCGATCC 59.249 47.619 0.00 0.00 0.00 3.36
733 759 3.508744 AACATTGTTTGATGGCCGATC 57.491 42.857 0.00 3.10 0.00 3.69
734 760 5.451798 GGATTAACATTGTTTGATGGCCGAT 60.452 40.000 7.45 0.00 0.00 4.18
735 761 4.142271 GGATTAACATTGTTTGATGGCCGA 60.142 41.667 7.45 0.00 0.00 5.54
736 762 4.111916 GGATTAACATTGTTTGATGGCCG 58.888 43.478 7.45 0.00 0.00 6.13
737 763 5.083533 TGGATTAACATTGTTTGATGGCC 57.916 39.130 7.45 0.00 0.00 5.36
738 764 5.062058 CGTTGGATTAACATTGTTTGATGGC 59.938 40.000 7.45 0.00 39.30 4.40
739 765 5.062058 GCGTTGGATTAACATTGTTTGATGG 59.938 40.000 7.45 0.00 39.30 3.51
740 766 5.062058 GGCGTTGGATTAACATTGTTTGATG 59.938 40.000 7.45 0.00 39.30 3.07
741 767 5.167845 GGCGTTGGATTAACATTGTTTGAT 58.832 37.500 7.45 2.83 39.30 2.57
742 768 4.551388 GGCGTTGGATTAACATTGTTTGA 58.449 39.130 7.45 0.00 39.30 2.69
743 769 3.677596 GGGCGTTGGATTAACATTGTTTG 59.322 43.478 7.45 0.00 39.30 2.93
744 770 3.576550 AGGGCGTTGGATTAACATTGTTT 59.423 39.130 7.45 0.00 39.30 2.83
745 771 3.161866 AGGGCGTTGGATTAACATTGTT 58.838 40.909 7.30 7.30 39.30 2.83
746 772 2.802719 AGGGCGTTGGATTAACATTGT 58.197 42.857 0.00 0.00 39.30 2.71
747 773 5.280945 CAATAGGGCGTTGGATTAACATTG 58.719 41.667 0.00 0.00 39.30 2.82
748 774 4.202111 GCAATAGGGCGTTGGATTAACATT 60.202 41.667 0.00 0.00 39.30 2.71
749 775 3.317993 GCAATAGGGCGTTGGATTAACAT 59.682 43.478 0.00 0.00 39.30 2.71
750 776 2.685897 GCAATAGGGCGTTGGATTAACA 59.314 45.455 0.00 0.00 39.30 2.41
751 777 2.949644 AGCAATAGGGCGTTGGATTAAC 59.050 45.455 0.00 0.00 39.27 2.01
752 778 3.290948 AGCAATAGGGCGTTGGATTAA 57.709 42.857 0.00 0.00 39.27 1.40
753 779 3.290948 AAGCAATAGGGCGTTGGATTA 57.709 42.857 0.00 0.00 39.27 1.75
754 780 2.143876 AAGCAATAGGGCGTTGGATT 57.856 45.000 0.00 0.00 39.27 3.01
755 781 2.143876 AAAGCAATAGGGCGTTGGAT 57.856 45.000 0.00 0.00 39.27 3.41
756 782 2.750712 GTTAAAGCAATAGGGCGTTGGA 59.249 45.455 0.00 0.00 36.21 3.53
757 783 2.477189 CGTTAAAGCAATAGGGCGTTGG 60.477 50.000 0.00 0.00 36.21 3.77
758 784 2.417239 TCGTTAAAGCAATAGGGCGTTG 59.583 45.455 0.00 0.00 36.21 4.10
759 785 2.702261 TCGTTAAAGCAATAGGGCGTT 58.298 42.857 0.00 0.00 38.90 4.84
760 786 2.389962 TCGTTAAAGCAATAGGGCGT 57.610 45.000 0.00 0.00 39.27 5.68
761 787 2.869801 TCATCGTTAAAGCAATAGGGCG 59.130 45.455 0.00 0.00 39.27 6.13
762 788 3.304057 GCTCATCGTTAAAGCAATAGGGC 60.304 47.826 0.00 0.00 36.06 5.19
763 789 3.059597 CGCTCATCGTTAAAGCAATAGGG 60.060 47.826 0.00 0.00 35.76 3.53
764 790 3.604772 GCGCTCATCGTTAAAGCAATAGG 60.605 47.826 0.00 0.00 41.07 2.57
765 791 3.246226 AGCGCTCATCGTTAAAGCAATAG 59.754 43.478 2.64 0.00 41.07 1.73
766 792 3.194861 AGCGCTCATCGTTAAAGCAATA 58.805 40.909 2.64 0.00 41.07 1.90
767 793 2.009774 AGCGCTCATCGTTAAAGCAAT 58.990 42.857 2.64 0.00 41.07 3.56
768 794 1.393539 GAGCGCTCATCGTTAAAGCAA 59.606 47.619 31.91 0.00 41.07 3.91
769 795 0.999406 GAGCGCTCATCGTTAAAGCA 59.001 50.000 31.91 0.00 41.07 3.91
770 796 0.999406 TGAGCGCTCATCGTTAAAGC 59.001 50.000 35.30 6.70 41.07 3.51
771 797 2.411748 TGTTGAGCGCTCATCGTTAAAG 59.588 45.455 38.40 0.00 39.64 1.85
772 798 2.409012 TGTTGAGCGCTCATCGTTAAA 58.591 42.857 38.40 20.61 39.64 1.52
773 799 2.073117 TGTTGAGCGCTCATCGTTAA 57.927 45.000 38.40 21.37 39.64 2.01
774 800 1.926510 CATGTTGAGCGCTCATCGTTA 59.073 47.619 38.40 22.14 39.64 3.18
775 801 0.723414 CATGTTGAGCGCTCATCGTT 59.277 50.000 38.40 24.83 39.64 3.85
776 802 0.390340 ACATGTTGAGCGCTCATCGT 60.390 50.000 38.40 33.20 39.64 3.73
777 803 0.723414 AACATGTTGAGCGCTCATCG 59.277 50.000 38.40 26.98 39.64 3.84
778 804 2.907910 AAACATGTTGAGCGCTCATC 57.092 45.000 38.40 34.90 39.64 2.92
779 805 2.096496 GCTAAACATGTTGAGCGCTCAT 59.904 45.455 38.40 24.45 37.32 2.90
780 806 1.464608 GCTAAACATGTTGAGCGCTCA 59.535 47.619 35.30 35.30 37.32 4.26
781 807 2.165282 GCTAAACATGTTGAGCGCTC 57.835 50.000 28.15 30.42 37.32 5.03
785 811 6.808212 ACAATTGTATGCTAAACATGTTGAGC 59.192 34.615 32.98 32.98 45.32 4.26
786 812 9.838975 TTACAATTGTATGCTAAACATGTTGAG 57.161 29.630 18.69 17.57 40.06 3.02
787 813 9.619316 GTTACAATTGTATGCTAAACATGTTGA 57.381 29.630 18.69 3.11 40.06 3.18
788 814 9.624697 AGTTACAATTGTATGCTAAACATGTTG 57.375 29.630 18.69 1.29 40.06 3.33
793 819 9.286170 TGGTAAGTTACAATTGTATGCTAAACA 57.714 29.630 18.69 14.34 0.00 2.83
912 938 9.738832 CAATGTATGTTGATATCATGCAGAAAA 57.261 29.630 6.17 0.12 40.10 2.29
913 939 7.863877 GCAATGTATGTTGATATCATGCAGAAA 59.136 33.333 15.40 7.84 40.10 2.52
914 940 7.013464 TGCAATGTATGTTGATATCATGCAGAA 59.987 33.333 17.90 6.81 40.10 3.02
915 941 6.487331 TGCAATGTATGTTGATATCATGCAGA 59.513 34.615 17.90 10.37 40.10 4.26
916 942 6.581166 GTGCAATGTATGTTGATATCATGCAG 59.419 38.462 20.85 7.12 40.10 4.41
917 943 6.039493 TGTGCAATGTATGTTGATATCATGCA 59.961 34.615 17.90 17.90 40.74 3.96
918 944 6.440436 TGTGCAATGTATGTTGATATCATGC 58.560 36.000 6.17 11.04 0.00 4.06
919 945 9.550811 GTATGTGCAATGTATGTTGATATCATG 57.449 33.333 6.17 0.25 0.00 3.07
920 946 9.287373 TGTATGTGCAATGTATGTTGATATCAT 57.713 29.630 6.17 0.00 0.00 2.45
921 947 8.558700 GTGTATGTGCAATGTATGTTGATATCA 58.441 33.333 0.00 0.00 0.00 2.15
922 948 8.558700 TGTGTATGTGCAATGTATGTTGATATC 58.441 33.333 0.00 0.00 0.00 1.63
923 949 8.449251 TGTGTATGTGCAATGTATGTTGATAT 57.551 30.769 0.00 0.00 0.00 1.63
924 950 7.856145 TGTGTATGTGCAATGTATGTTGATA 57.144 32.000 0.00 0.00 0.00 2.15
925 951 6.756299 TGTGTATGTGCAATGTATGTTGAT 57.244 33.333 0.00 0.00 0.00 2.57
926 952 6.756299 ATGTGTATGTGCAATGTATGTTGA 57.244 33.333 0.00 0.00 0.00 3.18
927 953 7.815398 AAATGTGTATGTGCAATGTATGTTG 57.185 32.000 0.00 0.00 0.00 3.33
928 954 8.739039 AGTAAATGTGTATGTGCAATGTATGTT 58.261 29.630 0.00 0.00 0.00 2.71
929 955 8.279970 AGTAAATGTGTATGTGCAATGTATGT 57.720 30.769 0.00 0.00 0.00 2.29
930 956 9.650371 GTAGTAAATGTGTATGTGCAATGTATG 57.350 33.333 0.00 0.00 0.00 2.39
931 957 9.389755 TGTAGTAAATGTGTATGTGCAATGTAT 57.610 29.630 0.00 0.00 0.00 2.29
932 958 8.779354 TGTAGTAAATGTGTATGTGCAATGTA 57.221 30.769 0.00 0.00 0.00 2.29
933 959 7.680442 TGTAGTAAATGTGTATGTGCAATGT 57.320 32.000 0.00 0.00 0.00 2.71
934 960 8.236586 AGTTGTAGTAAATGTGTATGTGCAATG 58.763 33.333 0.00 0.00 0.00 2.82
935 961 8.335532 AGTTGTAGTAAATGTGTATGTGCAAT 57.664 30.769 0.00 0.00 0.00 3.56
936 962 7.094975 GGAGTTGTAGTAAATGTGTATGTGCAA 60.095 37.037 0.00 0.00 0.00 4.08
937 963 6.370442 GGAGTTGTAGTAAATGTGTATGTGCA 59.630 38.462 0.00 0.00 0.00 4.57
938 964 6.183360 GGGAGTTGTAGTAAATGTGTATGTGC 60.183 42.308 0.00 0.00 0.00 4.57
939 965 6.876789 TGGGAGTTGTAGTAAATGTGTATGTG 59.123 38.462 0.00 0.00 0.00 3.21
940 966 6.877322 GTGGGAGTTGTAGTAAATGTGTATGT 59.123 38.462 0.00 0.00 0.00 2.29
941 967 6.315393 GGTGGGAGTTGTAGTAAATGTGTATG 59.685 42.308 0.00 0.00 0.00 2.39
942 968 6.013206 TGGTGGGAGTTGTAGTAAATGTGTAT 60.013 38.462 0.00 0.00 0.00 2.29
943 969 5.307456 TGGTGGGAGTTGTAGTAAATGTGTA 59.693 40.000 0.00 0.00 0.00 2.90
944 970 4.103469 TGGTGGGAGTTGTAGTAAATGTGT 59.897 41.667 0.00 0.00 0.00 3.72
945 971 4.454504 GTGGTGGGAGTTGTAGTAAATGTG 59.545 45.833 0.00 0.00 0.00 3.21
946 972 4.349930 AGTGGTGGGAGTTGTAGTAAATGT 59.650 41.667 0.00 0.00 0.00 2.71
947 973 4.906618 AGTGGTGGGAGTTGTAGTAAATG 58.093 43.478 0.00 0.00 0.00 2.32
948 974 5.578157 AAGTGGTGGGAGTTGTAGTAAAT 57.422 39.130 0.00 0.00 0.00 1.40
949 975 5.376756 AAAGTGGTGGGAGTTGTAGTAAA 57.623 39.130 0.00 0.00 0.00 2.01
950 976 5.104444 TGAAAAGTGGTGGGAGTTGTAGTAA 60.104 40.000 0.00 0.00 0.00 2.24
951 977 4.409574 TGAAAAGTGGTGGGAGTTGTAGTA 59.590 41.667 0.00 0.00 0.00 1.82
955 981 2.818751 TGAAAAGTGGTGGGAGTTGT 57.181 45.000 0.00 0.00 0.00 3.32
961 987 2.162681 GACTCCATGAAAAGTGGTGGG 58.837 52.381 0.00 0.00 37.96 4.61
969 995 7.201522 CGATCAGTTAATTCGACTCCATGAAAA 60.202 37.037 0.00 0.00 34.92 2.29
986 1012 9.610705 GGACTATATATAGTGGTCGATCAGTTA 57.389 37.037 26.51 1.62 43.27 2.24
1017 1048 4.119862 CGTTGGTGCTTAGCTACATACAT 58.880 43.478 5.60 0.00 0.00 2.29
1044 1086 0.761187 ATCCCATGTCGGTCAGGATG 59.239 55.000 0.00 0.00 35.99 3.51
1045 1087 1.051812 GATCCCATGTCGGTCAGGAT 58.948 55.000 0.00 0.00 40.05 3.24
1068 1110 3.005791 GGTAAGTGGACATGCAAGCTTTT 59.994 43.478 0.00 0.00 0.00 2.27
1315 1369 0.371301 CTCGTTGACGACATGCATGG 59.629 55.000 29.41 15.68 44.22 3.66
1328 1382 6.925718 ACACATCAATGGATATACTCTCGTTG 59.074 38.462 0.00 0.00 30.87 4.10
1905 1969 1.356979 CTCAGCAGCAGCATCATGC 59.643 57.895 0.00 0.00 46.88 4.06
1906 1970 0.658368 GACTCAGCAGCAGCATCATG 59.342 55.000 3.17 0.00 45.49 3.07
1927 2067 6.843752 TGGGTTATGTTATGGTTATTCCGAT 58.156 36.000 0.00 0.00 39.52 4.18
1928 2068 6.249911 TGGGTTATGTTATGGTTATTCCGA 57.750 37.500 0.00 0.00 39.52 4.55
1929 2069 6.569610 GCATGGGTTATGTTATGGTTATTCCG 60.570 42.308 0.00 0.00 39.08 4.30
1930 2070 6.266558 TGCATGGGTTATGTTATGGTTATTCC 59.733 38.462 0.00 0.00 39.08 3.01
1948 2088 2.124612 TCGTCCTGCATGCATGGG 60.125 61.111 27.34 19.99 0.00 4.00
2033 2177 3.556213 CCGTTGGAGTTGATGTAGGTCAA 60.556 47.826 0.00 0.00 35.84 3.18
2188 2419 2.497675 GAGGGAGCAGATGTACTTGTCA 59.502 50.000 0.00 0.00 0.00 3.58
2425 2666 2.325583 TTTTGTCTAGGGGCTATGCG 57.674 50.000 0.00 0.00 0.00 4.73
2430 2671 7.725844 CCAATCTTAATATTTTGTCTAGGGGCT 59.274 37.037 0.00 0.00 0.00 5.19
2457 2698 2.367377 CCCATGAGCCTCCCTCCA 60.367 66.667 0.00 0.00 39.98 3.86
2458 2699 2.367512 ACCCATGAGCCTCCCTCC 60.368 66.667 0.00 0.00 39.98 4.30
2472 2718 2.573340 CGCCAGCCAAAATGACCC 59.427 61.111 0.00 0.00 0.00 4.46
2908 3158 9.953565 TGTTTTCTTTATTACTAGCATACTGGT 57.046 29.630 0.00 0.00 41.13 4.00
2914 3164 9.646522 ATCCCATGTTTTCTTTATTACTAGCAT 57.353 29.630 0.00 0.00 0.00 3.79
2922 3172 9.816354 CGGAAAATATCCCATGTTTTCTTTATT 57.184 29.630 14.51 0.00 46.39 1.40
2923 3173 9.196139 TCGGAAAATATCCCATGTTTTCTTTAT 57.804 29.630 14.51 0.00 46.39 1.40
2924 3174 8.582657 TCGGAAAATATCCCATGTTTTCTTTA 57.417 30.769 14.51 3.02 46.39 1.85
2925 3175 7.475137 TCGGAAAATATCCCATGTTTTCTTT 57.525 32.000 14.51 0.00 46.39 2.52
2926 3176 7.660030 ATCGGAAAATATCCCATGTTTTCTT 57.340 32.000 14.51 2.84 46.39 2.52
2927 3177 8.940397 ATATCGGAAAATATCCCATGTTTTCT 57.060 30.769 14.51 2.89 46.39 2.52
2935 3185 8.934697 CCCTAGAATATATCGGAAAATATCCCA 58.065 37.037 0.00 0.00 46.39 4.37
2936 3186 9.155785 TCCCTAGAATATATCGGAAAATATCCC 57.844 37.037 0.00 0.00 46.39 3.85
2943 3193 9.937876 ACATATCTCCCTAGAATATATCGGAAA 57.062 33.333 0.00 0.00 34.73 3.13
2944 3194 9.575868 GACATATCTCCCTAGAATATATCGGAA 57.424 37.037 0.00 0.00 34.73 4.30
2945 3195 8.950480 AGACATATCTCCCTAGAATATATCGGA 58.050 37.037 0.00 0.00 34.73 4.55
2952 3202 9.742144 GTGTTCTAGACATATCTCCCTAGAATA 57.258 37.037 12.11 8.14 44.81 1.75
2953 3203 8.228206 TGTGTTCTAGACATATCTCCCTAGAAT 58.772 37.037 12.11 0.00 44.81 2.40
2954 3204 7.583625 TGTGTTCTAGACATATCTCCCTAGAA 58.416 38.462 0.00 0.00 42.54 2.10
2955 3205 7.150447 TGTGTTCTAGACATATCTCCCTAGA 57.850 40.000 0.00 0.00 41.10 2.43
3036 3286 6.365970 AACAGAGTGGACATCAGTTTAGAT 57.634 37.500 0.00 0.00 0.00 1.98
3037 3287 5.808366 AACAGAGTGGACATCAGTTTAGA 57.192 39.130 0.00 0.00 0.00 2.10
3038 3288 7.065085 CCATAAACAGAGTGGACATCAGTTTAG 59.935 40.741 8.81 3.51 40.03 1.85
3039 3289 6.878923 CCATAAACAGAGTGGACATCAGTTTA 59.121 38.462 6.26 6.26 40.56 2.01
3040 3290 5.707298 CCATAAACAGAGTGGACATCAGTTT 59.293 40.000 0.00 0.00 39.06 2.66
3041 3291 5.221925 ACCATAAACAGAGTGGACATCAGTT 60.222 40.000 0.00 0.00 36.82 3.16
3042 3292 4.287067 ACCATAAACAGAGTGGACATCAGT 59.713 41.667 0.00 0.00 36.82 3.41
3043 3293 4.836825 ACCATAAACAGAGTGGACATCAG 58.163 43.478 0.00 0.00 36.82 2.90
3044 3294 4.532126 AGACCATAAACAGAGTGGACATCA 59.468 41.667 0.00 0.00 36.82 3.07
3045 3295 5.091261 AGACCATAAACAGAGTGGACATC 57.909 43.478 0.00 0.00 36.82 3.06
3046 3296 6.814954 ATAGACCATAAACAGAGTGGACAT 57.185 37.500 0.00 0.00 36.82 3.06
3047 3297 6.620877 AATAGACCATAAACAGAGTGGACA 57.379 37.500 0.00 0.00 36.82 4.02
3048 3298 7.824779 AGAAAATAGACCATAAACAGAGTGGAC 59.175 37.037 0.00 0.00 36.82 4.02
3049 3299 7.918076 AGAAAATAGACCATAAACAGAGTGGA 58.082 34.615 0.00 0.00 36.82 4.02
3050 3300 8.567285 AAGAAAATAGACCATAAACAGAGTGG 57.433 34.615 0.00 0.00 38.96 4.00
3085 3335 5.368256 AATGCAACAACAACAAGCAAAAA 57.632 30.435 0.00 0.00 38.85 1.94
3086 3336 6.674694 ATAATGCAACAACAACAAGCAAAA 57.325 29.167 0.00 0.00 38.85 2.44
3087 3337 7.959689 ATATAATGCAACAACAACAAGCAAA 57.040 28.000 0.00 0.00 38.85 3.68
3088 3338 9.650539 AATATATAATGCAACAACAACAAGCAA 57.349 25.926 0.00 0.00 38.85 3.91
3089 3339 9.650539 AAATATATAATGCAACAACAACAAGCA 57.349 25.926 0.00 0.00 39.79 3.91
3090 3340 9.904647 CAAATATATAATGCAACAACAACAAGC 57.095 29.630 0.00 0.00 0.00 4.01
3097 3347 9.173939 GCTCTCACAAATATATAATGCAACAAC 57.826 33.333 0.00 0.00 0.00 3.32
3098 3348 9.123902 AGCTCTCACAAATATATAATGCAACAA 57.876 29.630 0.00 0.00 0.00 2.83
3099 3349 8.681486 AGCTCTCACAAATATATAATGCAACA 57.319 30.769 0.00 0.00 0.00 3.33
3108 3358 9.703892 GTCACATCTAAGCTCTCACAAATATAT 57.296 33.333 0.00 0.00 0.00 0.86
3109 3359 8.695456 TGTCACATCTAAGCTCTCACAAATATA 58.305 33.333 0.00 0.00 0.00 0.86
3110 3360 7.559486 TGTCACATCTAAGCTCTCACAAATAT 58.441 34.615 0.00 0.00 0.00 1.28
3111 3361 6.935167 TGTCACATCTAAGCTCTCACAAATA 58.065 36.000 0.00 0.00 0.00 1.40
3112 3362 5.798132 TGTCACATCTAAGCTCTCACAAAT 58.202 37.500 0.00 0.00 0.00 2.32
3113 3363 5.213891 TGTCACATCTAAGCTCTCACAAA 57.786 39.130 0.00 0.00 0.00 2.83
3114 3364 4.871933 TGTCACATCTAAGCTCTCACAA 57.128 40.909 0.00 0.00 0.00 3.33
3115 3365 4.142071 GGATGTCACATCTAAGCTCTCACA 60.142 45.833 17.46 0.00 0.00 3.58
3116 3366 4.099266 AGGATGTCACATCTAAGCTCTCAC 59.901 45.833 17.46 0.00 0.00 3.51
3117 3367 4.285020 AGGATGTCACATCTAAGCTCTCA 58.715 43.478 17.46 0.00 0.00 3.27
3118 3368 4.935352 AGGATGTCACATCTAAGCTCTC 57.065 45.455 17.46 0.00 0.00 3.20
3119 3369 5.690464 AAAGGATGTCACATCTAAGCTCT 57.310 39.130 17.46 2.09 0.00 4.09
3120 3370 7.849804 TTTAAAGGATGTCACATCTAAGCTC 57.150 36.000 17.46 0.00 0.00 4.09
3121 3371 8.515414 GTTTTTAAAGGATGTCACATCTAAGCT 58.485 33.333 17.46 3.19 0.00 3.74
3122 3372 8.296713 TGTTTTTAAAGGATGTCACATCTAAGC 58.703 33.333 17.46 0.73 0.00 3.09
3125 3375 9.739276 AGATGTTTTTAAAGGATGTCACATCTA 57.261 29.630 17.46 0.00 44.89 1.98
3126 3376 8.641498 AGATGTTTTTAAAGGATGTCACATCT 57.359 30.769 17.46 11.06 42.98 2.90
3127 3377 9.994432 CTAGATGTTTTTAAAGGATGTCACATC 57.006 33.333 9.53 9.53 39.62 3.06
3128 3378 9.739276 TCTAGATGTTTTTAAAGGATGTCACAT 57.261 29.630 0.00 0.00 0.00 3.21
3129 3379 9.739276 ATCTAGATGTTTTTAAAGGATGTCACA 57.261 29.630 3.89 0.00 0.00 3.58
3130 3380 9.994432 CATCTAGATGTTTTTAAAGGATGTCAC 57.006 33.333 22.42 0.00 34.23 3.67
3147 3397 9.376075 ACAGTTTGTCTAATTCACATCTAGATG 57.624 33.333 27.63 27.63 44.15 2.90
3148 3398 9.950496 AACAGTTTGTCTAATTCACATCTAGAT 57.050 29.630 0.00 0.00 0.00 1.98
3149 3399 9.778741 AAACAGTTTGTCTAATTCACATCTAGA 57.221 29.630 0.00 0.00 0.00 2.43
3150 3400 9.817365 CAAACAGTTTGTCTAATTCACATCTAG 57.183 33.333 16.77 0.00 35.94 2.43
3151 3401 9.554395 TCAAACAGTTTGTCTAATTCACATCTA 57.446 29.630 22.70 0.00 41.36 1.98
3152 3402 8.450578 TCAAACAGTTTGTCTAATTCACATCT 57.549 30.769 22.70 0.00 41.36 2.90
3153 3403 9.515020 TTTCAAACAGTTTGTCTAATTCACATC 57.485 29.630 22.70 0.00 41.36 3.06
3155 3405 9.868277 AATTTCAAACAGTTTGTCTAATTCACA 57.132 25.926 22.70 0.00 41.36 3.58
3160 3410 9.458374 CGGTAAATTTCAAACAGTTTGTCTAAT 57.542 29.630 22.70 17.23 41.36 1.73
3161 3411 8.460428 ACGGTAAATTTCAAACAGTTTGTCTAA 58.540 29.630 22.70 16.04 41.36 2.10
3162 3412 7.987649 ACGGTAAATTTCAAACAGTTTGTCTA 58.012 30.769 22.70 11.51 41.36 2.59
3163 3413 6.859017 ACGGTAAATTTCAAACAGTTTGTCT 58.141 32.000 22.70 8.46 41.36 3.41
3164 3414 6.748198 TGACGGTAAATTTCAAACAGTTTGTC 59.252 34.615 22.70 11.16 41.36 3.18
3165 3415 6.622549 TGACGGTAAATTTCAAACAGTTTGT 58.377 32.000 22.70 8.32 41.36 2.83
3166 3416 6.970043 TCTGACGGTAAATTTCAAACAGTTTG 59.030 34.615 18.62 18.62 41.96 2.93
3167 3417 7.090953 TCTGACGGTAAATTTCAAACAGTTT 57.909 32.000 0.00 0.00 0.00 2.66
3168 3418 6.687081 TCTGACGGTAAATTTCAAACAGTT 57.313 33.333 0.00 0.00 0.00 3.16
3169 3419 6.687081 TTCTGACGGTAAATTTCAAACAGT 57.313 33.333 0.00 0.00 0.00 3.55
3170 3420 9.113876 GTATTTCTGACGGTAAATTTCAAACAG 57.886 33.333 0.00 0.46 0.00 3.16
3171 3421 8.842280 AGTATTTCTGACGGTAAATTTCAAACA 58.158 29.630 0.00 0.00 0.00 2.83
3172 3422 9.673454 AAGTATTTCTGACGGTAAATTTCAAAC 57.327 29.630 0.00 0.00 0.00 2.93
3223 3473 9.821240 ACTGTAGATCAGAGATATGGAAGTTAT 57.179 33.333 0.00 0.00 46.27 1.89
3247 3497 0.461961 GTAGATTGAGCTCGGCCACT 59.538 55.000 9.64 6.60 0.00 4.00
3249 3499 0.687757 AGGTAGATTGAGCTCGGCCA 60.688 55.000 9.64 0.00 0.00 5.36
3253 3503 2.294791 CCCTACAGGTAGATTGAGCTCG 59.705 54.545 9.64 0.00 35.21 5.03
3276 3526 6.276847 CACTCCTCCAGACTCATAAATACAC 58.723 44.000 0.00 0.00 0.00 2.90
3280 3530 4.624913 TCCACTCCTCCAGACTCATAAAT 58.375 43.478 0.00 0.00 0.00 1.40
3373 3623 0.244178 GTTCTGTCCCGGAGTCTGAC 59.756 60.000 0.73 1.05 0.00 3.51
3383 3633 1.509703 GGTCGAAAGTGTTCTGTCCC 58.490 55.000 0.00 0.00 0.00 4.46
3387 3637 1.419374 CCTCGGTCGAAAGTGTTCTG 58.581 55.000 0.00 0.00 0.00 3.02
3395 3645 1.621814 AGTTTGATCCCTCGGTCGAAA 59.378 47.619 0.00 0.00 0.00 3.46
3412 3662 0.693049 ATCCAAGGCGTTCTGGAGTT 59.307 50.000 6.06 0.00 33.55 3.01
3423 3673 2.606275 GATCCGAACGATCCAAGGC 58.394 57.895 0.00 0.00 41.51 4.35
3466 3718 6.371809 TTTGATACAAGGTGTTCACTTCAC 57.628 37.500 2.98 0.00 35.36 3.18
3467 3719 5.530915 CCTTTGATACAAGGTGTTCACTTCA 59.469 40.000 2.98 0.00 0.00 3.02
3533 3798 1.287739 CTTCTCCTCCTCCAGTCCTCT 59.712 57.143 0.00 0.00 0.00 3.69
3551 3816 3.541242 AGATCAGGGATCGATCTCCTT 57.459 47.619 24.55 15.75 45.07 3.36
3579 3844 2.325082 GCCATCGAGCAACCAACGT 61.325 57.895 0.00 0.00 0.00 3.99
3582 3847 4.301505 GAGCCATCGAGCAACCAA 57.698 55.556 0.00 0.00 34.23 3.67
3695 3972 0.491371 AAATTCTGGAGGGCCCCAAA 59.509 50.000 21.43 6.24 35.47 3.28
3705 3983 2.760092 GCACATGGCCTAAAATTCTGGA 59.240 45.455 3.32 0.00 36.11 3.86
3735 4013 1.954362 GCCCACAGTGGTGCAAAACA 61.954 55.000 21.81 0.00 43.88 2.83
3736 4014 1.227234 GCCCACAGTGGTGCAAAAC 60.227 57.895 21.81 0.00 43.88 2.43
3771 4049 0.721718 GACGACATGCTACAACCAGC 59.278 55.000 0.00 0.00 42.15 4.85
3772 4050 2.263077 GAGACGACATGCTACAACCAG 58.737 52.381 0.00 0.00 0.00 4.00
3773 4051 1.402325 CGAGACGACATGCTACAACCA 60.402 52.381 0.00 0.00 0.00 3.67
3774 4052 1.269166 CGAGACGACATGCTACAACC 58.731 55.000 0.00 0.00 0.00 3.77
3775 4053 1.912110 GACGAGACGACATGCTACAAC 59.088 52.381 0.00 0.00 0.00 3.32
3776 4054 1.538075 TGACGAGACGACATGCTACAA 59.462 47.619 0.00 0.00 0.00 2.41
3777 4055 1.130561 CTGACGAGACGACATGCTACA 59.869 52.381 0.00 0.00 31.07 2.74
3778 4056 1.397343 TCTGACGAGACGACATGCTAC 59.603 52.381 0.00 0.00 31.07 3.58
3779 4057 1.397343 GTCTGACGAGACGACATGCTA 59.603 52.381 0.00 0.00 39.44 3.49
3780 4058 0.169230 GTCTGACGAGACGACATGCT 59.831 55.000 0.00 0.00 39.44 3.79
3781 4059 2.643044 GTCTGACGAGACGACATGC 58.357 57.895 0.00 0.00 39.44 4.06
3788 4066 1.419374 AATGTTGCGTCTGACGAGAC 58.581 50.000 32.07 25.89 46.05 3.36
3789 4067 1.792367 CAAATGTTGCGTCTGACGAGA 59.208 47.619 32.07 16.82 46.05 4.04
3790 4068 2.217353 CAAATGTTGCGTCTGACGAG 57.783 50.000 32.07 6.36 46.05 4.18
3801 4079 2.988493 CAATCAACGAGGGCAAATGTTG 59.012 45.455 0.00 5.16 42.25 3.33
3802 4080 2.627699 ACAATCAACGAGGGCAAATGTT 59.372 40.909 0.00 0.00 0.00 2.71
3803 4081 2.238521 ACAATCAACGAGGGCAAATGT 58.761 42.857 0.00 0.00 0.00 2.71
3804 4082 3.731867 GCTACAATCAACGAGGGCAAATG 60.732 47.826 0.00 0.00 0.00 2.32
3805 4083 2.423538 GCTACAATCAACGAGGGCAAAT 59.576 45.455 0.00 0.00 0.00 2.32
3806 4084 1.810151 GCTACAATCAACGAGGGCAAA 59.190 47.619 0.00 0.00 0.00 3.68
3807 4085 1.271108 TGCTACAATCAACGAGGGCAA 60.271 47.619 0.00 0.00 0.00 4.52
3808 4086 0.323302 TGCTACAATCAACGAGGGCA 59.677 50.000 0.00 0.00 0.00 5.36
3809 4087 0.727398 GTGCTACAATCAACGAGGGC 59.273 55.000 0.00 0.00 0.00 5.19
3810 4088 2.093306 TGTGCTACAATCAACGAGGG 57.907 50.000 0.00 0.00 0.00 4.30
3811 4089 2.282555 CGATGTGCTACAATCAACGAGG 59.717 50.000 0.00 0.00 31.08 4.63
3812 4090 2.923655 ACGATGTGCTACAATCAACGAG 59.076 45.455 0.00 0.00 33.12 4.18
3813 4091 2.921121 GACGATGTGCTACAATCAACGA 59.079 45.455 0.00 0.00 33.12 3.85
3814 4092 2.923655 AGACGATGTGCTACAATCAACG 59.076 45.455 0.00 0.00 34.52 4.10
3815 4093 3.926527 TGAGACGATGTGCTACAATCAAC 59.073 43.478 0.00 0.00 0.00 3.18
3816 4094 3.926527 GTGAGACGATGTGCTACAATCAA 59.073 43.478 0.00 0.00 0.00 2.57
3817 4095 3.511699 GTGAGACGATGTGCTACAATCA 58.488 45.455 0.00 0.00 0.00 2.57
3818 4096 2.860735 GGTGAGACGATGTGCTACAATC 59.139 50.000 0.00 0.00 0.00 2.67
3819 4097 2.233676 TGGTGAGACGATGTGCTACAAT 59.766 45.455 0.00 0.00 0.00 2.71
3820 4098 1.616374 TGGTGAGACGATGTGCTACAA 59.384 47.619 0.00 0.00 0.00 2.41
3821 4099 1.202348 CTGGTGAGACGATGTGCTACA 59.798 52.381 0.00 0.00 0.00 2.74
3822 4100 1.202582 ACTGGTGAGACGATGTGCTAC 59.797 52.381 0.00 0.00 0.00 3.58
3823 4101 1.202348 CACTGGTGAGACGATGTGCTA 59.798 52.381 0.00 0.00 0.00 3.49
3824 4102 0.037882 CACTGGTGAGACGATGTGCT 60.038 55.000 0.00 0.00 0.00 4.40
3825 4103 1.016130 CCACTGGTGAGACGATGTGC 61.016 60.000 1.93 0.00 0.00 4.57
3826 4104 1.016130 GCCACTGGTGAGACGATGTG 61.016 60.000 1.93 0.00 0.00 3.21
3827 4105 1.293498 GCCACTGGTGAGACGATGT 59.707 57.895 1.93 0.00 0.00 3.06
3828 4106 0.320683 TTGCCACTGGTGAGACGATG 60.321 55.000 1.93 0.00 0.00 3.84
3829 4107 0.320771 GTTGCCACTGGTGAGACGAT 60.321 55.000 1.93 0.00 0.00 3.73
3830 4108 1.069090 GTTGCCACTGGTGAGACGA 59.931 57.895 1.93 0.00 0.00 4.20
3831 4109 0.603707 ATGTTGCCACTGGTGAGACG 60.604 55.000 1.93 0.00 0.00 4.18
3832 4110 0.877071 CATGTTGCCACTGGTGAGAC 59.123 55.000 1.93 0.00 0.00 3.36
3833 4111 0.890542 GCATGTTGCCACTGGTGAGA 60.891 55.000 1.93 0.00 37.42 3.27
3834 4112 1.582968 GCATGTTGCCACTGGTGAG 59.417 57.895 1.93 0.00 37.42 3.51
3835 4113 2.260154 CGCATGTTGCCACTGGTGA 61.260 57.895 1.93 0.00 41.12 4.02
3836 4114 2.256158 CGCATGTTGCCACTGGTG 59.744 61.111 0.00 0.00 41.12 4.17
3837 4115 2.203337 ACGCATGTTGCCACTGGT 60.203 55.556 0.00 0.00 41.12 4.00
3838 4116 1.588824 ATGACGCATGTTGCCACTGG 61.589 55.000 0.00 0.00 41.12 4.00
3839 4117 0.241749 AATGACGCATGTTGCCACTG 59.758 50.000 0.00 0.00 41.12 3.66
3840 4118 1.819928 TAATGACGCATGTTGCCACT 58.180 45.000 0.00 0.00 41.12 4.00
3841 4119 2.627863 TTAATGACGCATGTTGCCAC 57.372 45.000 0.00 0.00 41.12 5.01
3842 4120 3.944650 ACTATTAATGACGCATGTTGCCA 59.055 39.130 0.00 0.00 41.12 4.92
3843 4121 4.552166 ACTATTAATGACGCATGTTGCC 57.448 40.909 0.00 0.00 41.12 4.52
3844 4122 5.854835 CAACTATTAATGACGCATGTTGC 57.145 39.130 0.00 0.00 40.69 4.17
3845 4123 5.331098 TGCAACTATTAATGACGCATGTTG 58.669 37.500 0.00 11.79 37.27 3.33
3846 4124 5.123820 ACTGCAACTATTAATGACGCATGTT 59.876 36.000 0.00 0.00 0.00 2.71
3847 4125 4.635765 ACTGCAACTATTAATGACGCATGT 59.364 37.500 0.00 0.81 0.00 3.21
3848 4126 5.160699 ACTGCAACTATTAATGACGCATG 57.839 39.130 0.00 0.00 0.00 4.06
3849 4127 7.496529 AATACTGCAACTATTAATGACGCAT 57.503 32.000 0.00 0.00 0.00 4.73
3850 4128 6.918892 AATACTGCAACTATTAATGACGCA 57.081 33.333 0.00 1.30 0.00 5.24
3851 4129 8.548721 ACTAAATACTGCAACTATTAATGACGC 58.451 33.333 0.00 0.00 0.00 5.19
3859 4137 9.042008 CCGTTATGACTAAATACTGCAACTATT 57.958 33.333 0.00 0.00 0.00 1.73
3860 4138 8.202137 ACCGTTATGACTAAATACTGCAACTAT 58.798 33.333 0.00 0.00 0.00 2.12
3861 4139 7.549839 ACCGTTATGACTAAATACTGCAACTA 58.450 34.615 0.00 0.00 0.00 2.24
3862 4140 6.403878 ACCGTTATGACTAAATACTGCAACT 58.596 36.000 0.00 0.00 0.00 3.16
3863 4141 6.657836 ACCGTTATGACTAAATACTGCAAC 57.342 37.500 0.00 0.00 0.00 4.17
3864 4142 6.651643 ACAACCGTTATGACTAAATACTGCAA 59.348 34.615 0.00 0.00 0.00 4.08
3865 4143 6.167685 ACAACCGTTATGACTAAATACTGCA 58.832 36.000 0.00 0.00 0.00 4.41
3866 4144 6.657836 ACAACCGTTATGACTAAATACTGC 57.342 37.500 0.00 0.00 0.00 4.40
3867 4145 7.305820 CGCTACAACCGTTATGACTAAATACTG 60.306 40.741 0.00 0.00 0.00 2.74
3868 4146 6.694411 CGCTACAACCGTTATGACTAAATACT 59.306 38.462 0.00 0.00 0.00 2.12
3869 4147 6.473455 ACGCTACAACCGTTATGACTAAATAC 59.527 38.462 0.00 0.00 34.96 1.89
3870 4148 6.563422 ACGCTACAACCGTTATGACTAAATA 58.437 36.000 0.00 0.00 34.96 1.40
3871 4149 5.413499 ACGCTACAACCGTTATGACTAAAT 58.587 37.500 0.00 0.00 34.96 1.40
3872 4150 4.808558 ACGCTACAACCGTTATGACTAAA 58.191 39.130 0.00 0.00 34.96 1.85
3873 4151 4.156556 AGACGCTACAACCGTTATGACTAA 59.843 41.667 0.00 0.00 39.30 2.24
3874 4152 3.691118 AGACGCTACAACCGTTATGACTA 59.309 43.478 0.00 0.00 39.30 2.59
3875 4153 2.490903 AGACGCTACAACCGTTATGACT 59.509 45.455 0.00 0.00 39.30 3.41
3876 4154 2.850647 GAGACGCTACAACCGTTATGAC 59.149 50.000 0.00 0.00 39.30 3.06
3877 4155 2.488937 TGAGACGCTACAACCGTTATGA 59.511 45.455 0.00 0.00 39.30 2.15
3878 4156 2.871133 TGAGACGCTACAACCGTTATG 58.129 47.619 0.00 0.00 39.30 1.90
3879 4157 3.119245 ACATGAGACGCTACAACCGTTAT 60.119 43.478 0.00 0.00 39.30 1.89
3880 4158 2.229543 ACATGAGACGCTACAACCGTTA 59.770 45.455 0.00 0.00 39.30 3.18
3881 4159 1.000506 ACATGAGACGCTACAACCGTT 59.999 47.619 0.00 0.00 39.30 4.44
3882 4160 0.601558 ACATGAGACGCTACAACCGT 59.398 50.000 0.00 0.00 42.31 4.83
3883 4161 1.390123 CAACATGAGACGCTACAACCG 59.610 52.381 0.00 0.00 0.00 4.44
3884 4162 2.412089 GTCAACATGAGACGCTACAACC 59.588 50.000 0.00 0.00 0.00 3.77
3885 4163 3.706994 GTCAACATGAGACGCTACAAC 57.293 47.619 0.00 0.00 0.00 3.32
3893 4171 0.867746 TGCAAGCGTCAACATGAGAC 59.132 50.000 0.00 6.35 0.00 3.36
3894 4172 1.592064 TTGCAAGCGTCAACATGAGA 58.408 45.000 0.00 0.00 0.00 3.27
3895 4173 2.624316 ATTGCAAGCGTCAACATGAG 57.376 45.000 4.94 0.00 0.00 2.90
3896 4174 3.073678 ACTATTGCAAGCGTCAACATGA 58.926 40.909 4.94 0.00 0.00 3.07
3897 4175 3.165890 CACTATTGCAAGCGTCAACATG 58.834 45.455 4.94 0.00 0.00 3.21
3898 4176 3.476295 CACTATTGCAAGCGTCAACAT 57.524 42.857 4.94 0.00 0.00 2.71
3899 4177 2.967459 CACTATTGCAAGCGTCAACA 57.033 45.000 4.94 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.