Multiple sequence alignment - TraesCS5A01G169400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G169400 chr5A 100.000 7705 0 0 1 7705 361868257 361875961 0.000000e+00 14229
1 TraesCS5A01G169400 chr5A 94.611 167 7 1 3268 3434 558675497 558675661 2.760000e-64 257
2 TraesCS5A01G169400 chr5A 93.642 173 8 2 3264 3435 320214409 320214239 9.920000e-64 255
3 TraesCS5A01G169400 chr5A 86.730 211 20 4 3225 3434 653299402 653299605 2.160000e-55 228
4 TraesCS5A01G169400 chr5A 91.912 136 11 0 6509 6644 439864644 439864779 2.840000e-44 191
5 TraesCS5A01G169400 chr5D 94.804 1636 64 13 1648 3269 272136518 272138146 0.000000e+00 2531
6 TraesCS5A01G169400 chr5D 94.107 1120 39 11 4080 5185 272138845 272139951 0.000000e+00 1677
7 TraesCS5A01G169400 chr5D 89.766 1280 52 25 293 1533 272134753 272135992 0.000000e+00 1565
8 TraesCS5A01G169400 chr5D 97.568 699 13 2 5235 5929 272139944 272140642 0.000000e+00 1194
9 TraesCS5A01G169400 chr5D 95.579 656 23 3 3430 4081 272138145 272138798 0.000000e+00 1046
10 TraesCS5A01G169400 chr5D 95.714 560 22 1 5941 6500 272140836 272141393 0.000000e+00 900
11 TraesCS5A01G169400 chr5D 86.151 491 59 5 2622 3109 125437735 125438219 8.860000e-144 521
12 TraesCS5A01G169400 chr5D 90.536 317 22 3 1 309 272118819 272119135 5.560000e-111 412
13 TraesCS5A01G169400 chr5D 89.224 232 19 5 2371 2599 125437522 125437750 1.270000e-72 285
14 TraesCS5A01G169400 chr5D 91.477 176 12 2 3266 3440 123460074 123459901 9.990000e-59 239
15 TraesCS5A01G169400 chr5D 80.062 321 51 11 6963 7275 244111230 244111545 7.780000e-55 226
16 TraesCS5A01G169400 chr5D 93.233 133 9 0 6515 6647 166628143 166628011 6.100000e-46 196
17 TraesCS5A01G169400 chr5D 86.957 92 10 2 3 92 173006534 173006625 1.370000e-17 102
18 TraesCS5A01G169400 chr5B 91.697 1626 102 14 4080 5692 308229445 308231050 0.000000e+00 2224
19 TraesCS5A01G169400 chr5B 89.693 1562 115 25 1641 3172 308227046 308228591 0.000000e+00 1951
20 TraesCS5A01G169400 chr5B 87.210 1681 116 49 1 1620 308224203 308225845 0.000000e+00 1821
21 TraesCS5A01G169400 chr5B 91.677 841 33 9 5697 6513 308231139 308231966 0.000000e+00 1131
22 TraesCS5A01G169400 chr5B 87.482 679 53 15 3430 4083 308228737 308229408 0.000000e+00 754
23 TraesCS5A01G169400 chr5B 87.686 471 54 3 2644 3112 400533788 400533320 5.260000e-151 545
24 TraesCS5A01G169400 chr5B 90.830 229 17 3 2371 2596 400534022 400533795 3.490000e-78 303
25 TraesCS5A01G169400 chr5B 89.035 228 20 4 2371 2595 298165359 298165134 2.120000e-70 278
26 TraesCS5A01G169400 chr5B 88.646 229 20 5 2371 2596 392518873 392519098 2.740000e-69 274
27 TraesCS5A01G169400 chr5B 94.083 169 8 1 3265 3433 317304199 317304365 9.920000e-64 255
28 TraesCS5A01G169400 chr4D 84.586 785 95 17 6935 7705 70673302 70674074 0.000000e+00 756
29 TraesCS5A01G169400 chr4D 93.750 128 8 0 6515 6642 62463875 62464002 7.890000e-45 193
30 TraesCS5A01G169400 chr3D 83.738 824 105 19 6901 7705 593641685 593642498 0.000000e+00 752
31 TraesCS5A01G169400 chr3D 90.270 185 13 4 3259 3441 128213999 128214180 3.590000e-58 237
32 TraesCS5A01G169400 chr2D 78.537 1230 198 52 1784 2973 13526838 13528041 0.000000e+00 749
33 TraesCS5A01G169400 chr2D 81.939 753 118 13 6966 7705 508089673 508090420 8.490000e-174 621
34 TraesCS5A01G169400 chr2D 80.978 552 82 17 7168 7705 423555248 423555790 4.300000e-112 416
35 TraesCS5A01G169400 chr2D 87.234 94 7 3 1 92 196217683 196217773 1.370000e-17 102
36 TraesCS5A01G169400 chr2A 78.211 1230 193 50 1784 2970 15607912 15609109 0.000000e+00 717
37 TraesCS5A01G169400 chr2A 93.902 164 8 1 3268 3431 184561154 184561315 5.970000e-61 246
38 TraesCS5A01G169400 chr4B 82.360 805 108 19 6910 7705 401105886 401105107 0.000000e+00 669
39 TraesCS5A01G169400 chr4B 89.035 228 20 4 2371 2595 188059415 188059190 2.120000e-70 278
40 TraesCS5A01G169400 chr4B 90.580 138 12 1 6507 6644 375385917 375385781 1.710000e-41 182
41 TraesCS5A01G169400 chr4A 81.586 706 113 13 6935 7627 552275100 552275801 1.120000e-157 568
42 TraesCS5A01G169400 chr4A 90.517 232 18 3 2371 2599 339697823 339697593 3.490000e-78 303
43 TraesCS5A01G169400 chr4A 89.655 232 20 3 2371 2599 339694125 339693895 7.560000e-75 292
44 TraesCS5A01G169400 chr7A 80.628 733 113 21 6966 7685 163110153 163110869 2.450000e-149 540
45 TraesCS5A01G169400 chr7A 81.683 606 95 11 7062 7655 163092409 163093010 2.500000e-134 490
46 TraesCS5A01G169400 chr7A 94.012 167 7 2 3267 3432 677696246 677696410 4.620000e-62 250
47 TraesCS5A01G169400 chr7A 92.353 170 11 1 3263 3432 451519806 451519973 2.780000e-59 241
48 TraesCS5A01G169400 chr7A 91.791 134 10 1 6508 6641 426754117 426753985 1.320000e-42 185
49 TraesCS5A01G169400 chr2B 85.081 496 68 4 7215 7705 188769252 188768758 1.150000e-137 501
50 TraesCS5A01G169400 chr2B 83.122 551 75 9 6975 7513 654569827 654569283 3.230000e-133 486
51 TraesCS5A01G169400 chr2B 79.155 734 122 22 1784 2503 24238901 24239617 5.410000e-131 479
52 TraesCS5A01G169400 chr2B 87.500 264 32 1 2645 2907 24239808 24240071 3.490000e-78 303
53 TraesCS5A01G169400 chr2B 84.698 281 36 6 3775 4052 24240688 24240964 2.740000e-69 274
54 TraesCS5A01G169400 chr6B 85.288 469 51 5 7247 7705 705526061 705526521 1.170000e-127 468
55 TraesCS5A01G169400 chr7B 78.652 623 95 28 1784 2385 611521576 611522181 5.640000e-101 379
56 TraesCS5A01G169400 chr7D 78.295 387 74 10 7326 7705 12170468 12170851 2.780000e-59 241
57 TraesCS5A01G169400 chr7D 90.323 93 8 1 1 92 311004907 311004999 3.780000e-23 121
58 TraesCS5A01G169400 chr3B 93.077 130 8 1 6512 6641 500302622 500302750 1.020000e-43 189
59 TraesCS5A01G169400 chr3B 90.071 141 12 2 6515 6654 465064920 465064781 1.710000e-41 182
60 TraesCS5A01G169400 chr3B 87.000 100 5 3 1 92 724463826 724463727 1.060000e-18 106
61 TraesCS5A01G169400 chr1A 90.141 142 12 2 6501 6641 486045759 486045899 4.750000e-42 183
62 TraesCS5A01G169400 chr1B 88.591 149 14 3 6501 6647 409879950 409879803 2.210000e-40 178


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G169400 chr5A 361868257 361875961 7704 False 14229.0 14229 100.000000 1 7705 1 chr5A.!!$F1 7704
1 TraesCS5A01G169400 chr5D 272134753 272141393 6640 False 1485.5 2531 94.589667 293 6500 6 chr5D.!!$F5 6207
2 TraesCS5A01G169400 chr5D 125437522 125438219 697 False 403.0 521 87.687500 2371 3109 2 chr5D.!!$F4 738
3 TraesCS5A01G169400 chr5B 308224203 308231966 7763 False 1576.2 2224 89.551800 1 6513 5 chr5B.!!$F3 6512
4 TraesCS5A01G169400 chr5B 400533320 400534022 702 True 424.0 545 89.258000 2371 3112 2 chr5B.!!$R2 741
5 TraesCS5A01G169400 chr4D 70673302 70674074 772 False 756.0 756 84.586000 6935 7705 1 chr4D.!!$F2 770
6 TraesCS5A01G169400 chr3D 593641685 593642498 813 False 752.0 752 83.738000 6901 7705 1 chr3D.!!$F2 804
7 TraesCS5A01G169400 chr2D 13526838 13528041 1203 False 749.0 749 78.537000 1784 2973 1 chr2D.!!$F1 1189
8 TraesCS5A01G169400 chr2D 508089673 508090420 747 False 621.0 621 81.939000 6966 7705 1 chr2D.!!$F4 739
9 TraesCS5A01G169400 chr2D 423555248 423555790 542 False 416.0 416 80.978000 7168 7705 1 chr2D.!!$F3 537
10 TraesCS5A01G169400 chr2A 15607912 15609109 1197 False 717.0 717 78.211000 1784 2970 1 chr2A.!!$F1 1186
11 TraesCS5A01G169400 chr4B 401105107 401105886 779 True 669.0 669 82.360000 6910 7705 1 chr4B.!!$R3 795
12 TraesCS5A01G169400 chr4A 552275100 552275801 701 False 568.0 568 81.586000 6935 7627 1 chr4A.!!$F1 692
13 TraesCS5A01G169400 chr4A 339693895 339697823 3928 True 297.5 303 90.086000 2371 2599 2 chr4A.!!$R1 228
14 TraesCS5A01G169400 chr7A 163110153 163110869 716 False 540.0 540 80.628000 6966 7685 1 chr7A.!!$F2 719
15 TraesCS5A01G169400 chr7A 163092409 163093010 601 False 490.0 490 81.683000 7062 7655 1 chr7A.!!$F1 593
16 TraesCS5A01G169400 chr2B 654569283 654569827 544 True 486.0 486 83.122000 6975 7513 1 chr2B.!!$R2 538
17 TraesCS5A01G169400 chr2B 24238901 24240964 2063 False 352.0 479 83.784333 1784 4052 3 chr2B.!!$F1 2268
18 TraesCS5A01G169400 chr7B 611521576 611522181 605 False 379.0 379 78.652000 1784 2385 1 chr7B.!!$F1 601

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
102 105 0.387239 GCGCTTTCACCAACACATCC 60.387 55.000 0.00 0.00 0.00 3.51 F
239 242 0.814010 AGGTGTTTATCATCGGCGCC 60.814 55.000 19.07 19.07 31.45 6.53 F
1249 1304 0.250513 GGCCTTGACTCGGTTCAGAT 59.749 55.000 0.00 0.00 0.00 2.90 F
2674 4453 1.134340 TGGCTGTTTACGTCTTGGTGT 60.134 47.619 0.00 0.00 0.00 4.16 F
3570 5643 1.227249 TTTGTTTCCTGGGTCTGGGA 58.773 50.000 0.00 0.00 0.00 4.37 F
4365 6517 1.066573 ACGACCAGCATTCAAGGAGAG 60.067 52.381 0.00 0.00 0.00 3.20 F
5711 7966 0.518636 CAACTCCCATGCTGACAACG 59.481 55.000 0.00 0.00 0.00 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1127 1179 0.605083 GCCTTGGAAAAAGCTGGGAG 59.395 55.000 0.00 0.0 0.00 4.30 R
1581 2026 0.823460 TCTGGCATGATGTCACGCTA 59.177 50.000 0.00 0.0 35.13 4.26 R
3189 5037 0.249699 TCGAAGCAAGCAACGAAGGA 60.250 50.000 10.09 0.0 0.00 3.36 R
4307 6457 1.605232 TGCGTCAAACTACGAGACAGA 59.395 47.619 0.00 0.0 45.68 3.41 R
4742 6899 0.981183 ACACAATAGGAACCTCGGCA 59.019 50.000 0.00 0.0 0.00 5.69 R
6015 8452 1.879380 TGGACGCAAAAAGGAGTCATG 59.121 47.619 0.00 0.0 39.06 3.07 R
6892 9330 0.038159 GTCTTGGGGTGTCGTCAGAG 60.038 60.000 0.00 0.0 0.00 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 6.931281 TCTTCACTCTGATCTTCGTCAAATTT 59.069 34.615 0.00 0.00 0.00 1.82
58 59 8.964150 AGTTTGACGAATTTCTAAAAATTTCCG 58.036 29.630 0.00 1.74 43.48 4.30
59 60 8.748582 GTTTGACGAATTTCTAAAAATTTCCGT 58.251 29.630 8.95 8.95 43.48 4.69
61 62 8.496872 TGACGAATTTCTAAAAATTTCCGTTC 57.503 30.769 9.97 6.31 43.48 3.95
62 63 8.129840 TGACGAATTTCTAAAAATTTCCGTTCA 58.870 29.630 9.97 7.89 43.48 3.18
63 64 8.277270 ACGAATTTCTAAAAATTTCCGTTCAC 57.723 30.769 0.00 0.00 43.48 3.18
66 67 6.718522 TTTCTAAAAATTTCCGTTCACCCT 57.281 33.333 0.00 0.00 0.00 4.34
102 105 0.387239 GCGCTTTCACCAACACATCC 60.387 55.000 0.00 0.00 0.00 3.51
108 111 1.667830 CACCAACACATCCGCGAGT 60.668 57.895 8.23 0.00 0.00 4.18
119 122 2.378445 TCCGCGAGTCATCAAAATGA 57.622 45.000 8.23 0.00 39.63 2.57
146 149 1.237285 AACCTGACACAATGCTCGGC 61.237 55.000 0.00 0.00 0.00 5.54
215 218 3.787001 GCCTCCAGCGCCTTACCT 61.787 66.667 2.29 0.00 0.00 3.08
219 222 1.000486 TCCAGCGCCTTACCTCTCT 60.000 57.895 2.29 0.00 0.00 3.10
236 239 4.551388 CTCTCTAGGTGTTTATCATCGGC 58.449 47.826 0.00 0.00 31.45 5.54
239 242 0.814010 AGGTGTTTATCATCGGCGCC 60.814 55.000 19.07 19.07 31.45 6.53
241 244 1.539496 GGTGTTTATCATCGGCGCCTA 60.539 52.381 26.68 15.56 0.00 3.93
305 314 3.490759 GACACGCAGGCATGACCG 61.491 66.667 0.62 0.00 46.52 4.79
339 354 3.807538 GTCTACGACCGCTGGCGA 61.808 66.667 11.44 0.00 42.83 5.54
421 439 6.039616 GCAAACTTTAAAACATGGTCAGACA 58.960 36.000 2.17 0.00 0.00 3.41
436 481 5.186797 TGGTCAGACAAGGTCAAAACAATTT 59.813 36.000 2.17 0.00 34.60 1.82
490 535 6.589135 CACCCTCCTATTAATCCGTTTAAGT 58.411 40.000 0.00 0.00 33.40 2.24
491 536 6.704937 CACCCTCCTATTAATCCGTTTAAGTC 59.295 42.308 0.00 0.00 33.40 3.01
492 537 6.614496 ACCCTCCTATTAATCCGTTTAAGTCT 59.386 38.462 0.00 0.00 33.40 3.24
493 538 7.126879 ACCCTCCTATTAATCCGTTTAAGTCTT 59.873 37.037 0.00 0.00 33.40 3.01
494 539 7.441458 CCCTCCTATTAATCCGTTTAAGTCTTG 59.559 40.741 0.00 0.00 33.40 3.02
495 540 8.202137 CCTCCTATTAATCCGTTTAAGTCTTGA 58.798 37.037 0.00 0.00 33.40 3.02
551 596 3.967987 AGATTGTACGGGAATAGGAGCTT 59.032 43.478 0.00 0.00 0.00 3.74
570 615 7.015779 AGGAGCTTATTACTACCTTCCATCTTC 59.984 40.741 0.00 0.00 0.00 2.87
763 814 3.042682 TCCGAGGAGCCCAATATAACAA 58.957 45.455 0.00 0.00 0.00 2.83
764 815 3.139077 CCGAGGAGCCCAATATAACAAC 58.861 50.000 0.00 0.00 0.00 3.32
765 816 3.433031 CCGAGGAGCCCAATATAACAACA 60.433 47.826 0.00 0.00 0.00 3.33
854 905 2.841988 ATCTCGGCTCCTCCAGGC 60.842 66.667 0.00 0.00 44.60 4.85
898 949 2.653448 CAGATCGAGGCACGCTCG 60.653 66.667 0.00 4.68 41.22 5.03
973 1025 2.765969 CCCATTCACCCCTGCTGT 59.234 61.111 0.00 0.00 0.00 4.40
987 1039 2.278206 CTGTCGAGGGATCGCGTG 60.278 66.667 5.77 1.14 37.46 5.34
988 1040 4.492160 TGTCGAGGGATCGCGTGC 62.492 66.667 5.77 0.00 37.46 5.34
1175 1227 2.959030 TGCTCACTGTCAGTAGTTCAGT 59.041 45.455 4.85 0.00 42.14 3.41
1248 1303 1.118965 TGGCCTTGACTCGGTTCAGA 61.119 55.000 3.32 0.00 0.00 3.27
1249 1304 0.250513 GGCCTTGACTCGGTTCAGAT 59.749 55.000 0.00 0.00 0.00 2.90
1252 1307 3.596214 GCCTTGACTCGGTTCAGATAAA 58.404 45.455 0.00 0.00 0.00 1.40
1253 1308 3.371285 GCCTTGACTCGGTTCAGATAAAC 59.629 47.826 0.00 0.00 0.00 2.01
1266 1321 8.331022 CGGTTCAGATAAACACATTGATCTAAG 58.669 37.037 0.00 0.00 0.00 2.18
1327 1382 7.925043 TTTAATCCTTATTCGTACTTGCCAA 57.075 32.000 0.00 0.00 0.00 4.52
1403 1458 3.118555 TGCGGTTGCCAGTATAACATACT 60.119 43.478 0.00 0.00 41.78 2.12
1404 1459 3.493503 GCGGTTGCCAGTATAACATACTC 59.506 47.826 0.00 0.00 33.98 2.59
1405 1460 4.056050 CGGTTGCCAGTATAACATACTCC 58.944 47.826 0.00 0.00 0.00 3.85
1408 1463 5.470098 GGTTGCCAGTATAACATACTCCATG 59.530 44.000 0.00 0.00 40.78 3.66
1410 1465 6.101650 TGCCAGTATAACATACTCCATGAG 57.898 41.667 0.00 0.00 38.10 2.90
1426 1484 7.437748 ACTCCATGAGTAGTTGATATGCTTAC 58.562 38.462 0.00 0.00 41.51 2.34
1427 1485 6.447162 TCCATGAGTAGTTGATATGCTTACG 58.553 40.000 0.00 0.00 0.00 3.18
1428 1486 5.119279 CCATGAGTAGTTGATATGCTTACGC 59.881 44.000 0.00 0.00 0.00 4.42
1484 1924 3.982516 AGGCTAATTTCCCTTTTCCTCC 58.017 45.455 0.00 0.00 0.00 4.30
1580 2025 5.613358 AAAGGAAACAGTTGATTCGCTAG 57.387 39.130 0.00 0.00 0.00 3.42
1581 2026 4.273148 AGGAAACAGTTGATTCGCTAGT 57.727 40.909 0.00 0.00 0.00 2.57
1695 3321 2.438763 AGATGGCTTCCCTGATCTTCAG 59.561 50.000 0.00 0.00 43.91 3.02
2229 3872 8.018537 ACCATGCTTGTATAATCTGTGTACTA 57.981 34.615 0.00 0.00 0.00 1.82
2231 3874 9.325198 CCATGCTTGTATAATCTGTGTACTAAA 57.675 33.333 0.00 0.00 0.00 1.85
2562 4255 2.987821 GCCTTTTCAGTACTCTCGTGTC 59.012 50.000 0.00 0.00 0.00 3.67
2674 4453 1.134340 TGGCTGTTTACGTCTTGGTGT 60.134 47.619 0.00 0.00 0.00 4.16
2943 4723 9.916397 GCACACATTGTCTTAGTTATTATGTAC 57.084 33.333 0.00 0.00 0.00 2.90
2957 4737 8.298140 AGTTATTATGTACGGAGATTCAGTAGC 58.702 37.037 0.00 0.00 28.13 3.58
2964 4744 2.796383 CGGAGATTCAGTAGCGGTGAAG 60.796 54.545 0.00 0.00 37.35 3.02
2972 4752 7.868415 AGATTCAGTAGCGGTGAAGATTAATAC 59.132 37.037 0.00 0.00 37.35 1.89
2981 4762 7.554835 AGCGGTGAAGATTAATACCAAATACAA 59.445 33.333 6.06 0.00 32.75 2.41
3189 5037 7.750947 AGTTAGGGTAGGTTGAGTAAATGAT 57.249 36.000 0.00 0.00 0.00 2.45
3278 5349 8.953223 AGATATTACTTTTATACTCCCTCCGT 57.047 34.615 0.00 0.00 0.00 4.69
3279 5350 9.377238 AGATATTACTTTTATACTCCCTCCGTT 57.623 33.333 0.00 0.00 0.00 4.44
3280 5351 9.993454 GATATTACTTTTATACTCCCTCCGTTT 57.007 33.333 0.00 0.00 0.00 3.60
3281 5352 9.993454 ATATTACTTTTATACTCCCTCCGTTTC 57.007 33.333 0.00 0.00 0.00 2.78
3282 5353 7.486407 TTACTTTTATACTCCCTCCGTTTCT 57.514 36.000 0.00 0.00 0.00 2.52
3283 5354 8.593945 TTACTTTTATACTCCCTCCGTTTCTA 57.406 34.615 0.00 0.00 0.00 2.10
3284 5355 7.486407 ACTTTTATACTCCCTCCGTTTCTAA 57.514 36.000 0.00 0.00 0.00 2.10
3285 5356 7.910584 ACTTTTATACTCCCTCCGTTTCTAAA 58.089 34.615 0.00 0.00 0.00 1.85
3286 5357 8.546322 ACTTTTATACTCCCTCCGTTTCTAAAT 58.454 33.333 0.00 0.00 0.00 1.40
3292 5363 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
3293 5364 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
3294 5365 7.564292 ACTCCCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
3295 5366 8.315220 TCCCTCCGTTTCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
3296 5367 8.765517 TCCCTCCGTTTCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
3297 5368 9.392259 CCCTCCGTTTCTAAATATAAGTCTTTT 57.608 33.333 0.00 0.00 0.00 2.27
3316 5387 9.660180 AGTCTTTTTAGAGATTTCAGTATGGAC 57.340 33.333 0.00 0.00 36.16 4.02
3317 5388 9.660180 GTCTTTTTAGAGATTTCAGTATGGACT 57.340 33.333 0.00 0.00 36.16 3.85
3335 5406 7.867305 ATGGACTACATACGGATGTCTATAG 57.133 40.000 18.65 11.71 43.01 1.31
3336 5407 7.012661 TGGACTACATACGGATGTCTATAGA 57.987 40.000 18.65 0.00 43.01 1.98
3337 5408 6.877855 TGGACTACATACGGATGTCTATAGAC 59.122 42.308 18.65 23.53 43.01 2.59
3361 5432 7.748031 CATACTTCAGAGTGTGTAGATTCAC 57.252 40.000 0.71 0.00 39.40 3.18
3362 5433 7.542890 CATACTTCAGAGTGTGTAGATTCACT 58.457 38.462 0.71 0.00 45.81 3.41
3370 5441 6.246420 AGTGTGTAGATTCACTCATTTTGC 57.754 37.500 0.00 0.00 40.28 3.68
3371 5442 6.000219 AGTGTGTAGATTCACTCATTTTGCT 59.000 36.000 0.00 0.00 40.28 3.91
3372 5443 6.148480 AGTGTGTAGATTCACTCATTTTGCTC 59.852 38.462 0.00 0.00 40.28 4.26
3373 5444 5.412594 TGTGTAGATTCACTCATTTTGCTCC 59.587 40.000 0.00 0.00 38.90 4.70
3374 5445 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3375 5446 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3376 5447 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3377 5448 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3378 5449 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3379 5450 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3380 5451 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3381 5452 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3382 5453 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3383 5454 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3384 5455 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
3385 5456 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
3386 5457 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
3387 5458 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
3388 5459 5.801531 TTTGCTCCGTATGTAGTCCATAT 57.198 39.130 0.00 0.00 38.29 1.78
3389 5460 5.801531 TTGCTCCGTATGTAGTCCATATT 57.198 39.130 0.00 0.00 38.29 1.28
3390 5461 5.134202 TGCTCCGTATGTAGTCCATATTG 57.866 43.478 0.00 0.00 38.29 1.90
3391 5462 4.021456 TGCTCCGTATGTAGTCCATATTGG 60.021 45.833 0.00 0.00 38.29 3.16
3392 5463 4.219944 GCTCCGTATGTAGTCCATATTGGA 59.780 45.833 0.00 0.00 45.98 3.53
3407 5478 8.789767 TCCATATTGGAATCTCTAGAAAGACT 57.210 34.615 0.00 0.00 45.00 3.24
3408 5479 9.218525 TCCATATTGGAATCTCTAGAAAGACTT 57.781 33.333 0.00 0.00 45.00 3.01
3426 5497 9.508642 GAAAGACTTATATTTAGGAATGGAGGG 57.491 37.037 0.00 0.00 0.00 4.30
3427 5498 8.814448 AAGACTTATATTTAGGAATGGAGGGA 57.186 34.615 0.00 0.00 0.00 4.20
3428 5499 8.442660 AGACTTATATTTAGGAATGGAGGGAG 57.557 38.462 0.00 0.00 0.00 4.30
3429 5500 8.019652 AGACTTATATTTAGGAATGGAGGGAGT 58.980 37.037 0.00 0.00 0.00 3.85
3430 5501 9.322769 GACTTATATTTAGGAATGGAGGGAGTA 57.677 37.037 0.00 0.00 0.00 2.59
3476 5547 3.256383 TGCAGAACAATATGCTTTGCACT 59.744 39.130 0.00 0.00 44.12 4.40
3496 5567 8.296799 TGCACTTTAAATCACTTTGCAATTAG 57.703 30.769 0.00 0.00 0.00 1.73
3570 5643 1.227249 TTTGTTTCCTGGGTCTGGGA 58.773 50.000 0.00 0.00 0.00 4.37
3766 5848 8.999431 TCTAAGATTCGCTGTTTTGTTCTTAAT 58.001 29.630 0.00 0.00 0.00 1.40
3996 6098 6.373005 TCATCCAGATTGAAGTTCCTGTTA 57.627 37.500 0.00 0.00 0.00 2.41
4089 6239 7.695480 TGGCACAAATAAGCTATAAACAAGA 57.305 32.000 0.00 0.00 31.92 3.02
4192 6342 9.235537 GTACGTATTTTGTTGTTGGTAAACATT 57.764 29.630 0.00 0.00 45.54 2.71
4290 6440 7.384660 GTGAATAAATGTCTAGGCTCTCATCTG 59.615 40.741 0.00 0.00 0.00 2.90
4307 6457 9.872721 CTCTCATCTGCATCATATAACTATTGT 57.127 33.333 0.00 0.00 0.00 2.71
4308 6458 9.866798 TCTCATCTGCATCATATAACTATTGTC 57.133 33.333 0.00 0.00 0.00 3.18
4365 6517 1.066573 ACGACCAGCATTCAAGGAGAG 60.067 52.381 0.00 0.00 0.00 3.20
4417 6569 7.633116 GCTTCTAGTATAAGGTACCTGCTTGTT 60.633 40.741 17.14 0.11 0.00 2.83
4419 6571 8.230472 TCTAGTATAAGGTACCTGCTTGTTAC 57.770 38.462 17.14 10.83 0.00 2.50
4462 6614 7.175641 CCTTTTGAAGTCCTTCTGTCACATATT 59.824 37.037 8.40 0.00 40.14 1.28
4468 6620 7.206981 AGTCCTTCTGTCACATATTGTTTTG 57.793 36.000 0.00 0.00 0.00 2.44
4518 6670 7.998964 AGATGTGGTTTTCCTTCTTTCTTTCTA 59.001 33.333 0.00 0.00 41.38 2.10
4807 6964 3.592898 TGTAGTGTCTCGATGCAATGT 57.407 42.857 0.00 0.00 0.00 2.71
4908 7074 1.869767 CCTGCACTGACTGTCTTTGAC 59.130 52.381 9.51 3.80 0.00 3.18
4994 7160 4.502016 CATCTGCACTGAGTAACATCTGT 58.498 43.478 0.00 0.00 32.23 3.41
5011 7177 7.352079 ACATCTGTTTTCTTTTGAGTGGAAT 57.648 32.000 0.00 0.00 0.00 3.01
5221 7388 2.353505 GGTTACAGGAGTCCGTCTTTCC 60.354 54.545 2.76 0.27 0.00 3.13
5222 7389 2.561858 GTTACAGGAGTCCGTCTTTCCT 59.438 50.000 2.76 0.00 41.97 3.36
5444 7611 7.776933 TTTCGGTATCTCTTGATCATTTCTG 57.223 36.000 0.00 0.00 34.32 3.02
5619 7787 6.899393 AAATAAGTCAACATTCTTGCCAGA 57.101 33.333 0.00 0.00 0.00 3.86
5676 7847 8.691661 AACCAGCAATACTTATTAATCCGATT 57.308 30.769 0.00 0.00 0.00 3.34
5678 7849 9.216117 ACCAGCAATACTTATTAATCCGATTAC 57.784 33.333 0.00 0.00 0.00 1.89
5711 7966 0.518636 CAACTCCCATGCTGACAACG 59.481 55.000 0.00 0.00 0.00 4.10
6015 8452 6.509418 TGTTACAACTATTTGGCCATCTTC 57.491 37.500 6.09 0.00 37.00 2.87
6016 8453 6.007076 TGTTACAACTATTTGGCCATCTTCA 58.993 36.000 6.09 0.00 37.00 3.02
6109 8546 6.773976 TTGAGGCTTAAAAAGGATATGTGG 57.226 37.500 0.00 0.00 0.00 4.17
6149 8587 6.573664 TTTCATTTACCATGTCTTCAGTGG 57.426 37.500 0.00 0.00 38.96 4.00
6229 8667 4.015872 TGCCCGTTTCTCATAGTTCTTT 57.984 40.909 0.00 0.00 0.00 2.52
6362 8800 1.335810 TCGTTATGGAGCTCGCGTAAT 59.664 47.619 5.77 0.00 0.00 1.89
6522 8960 9.939802 TTTTATTTTCTCTTGTACTACTCCCTC 57.060 33.333 0.00 0.00 0.00 4.30
6523 8961 8.896722 TTATTTTCTCTTGTACTACTCCCTCT 57.103 34.615 0.00 0.00 0.00 3.69
6524 8962 6.591750 TTTTCTCTTGTACTACTCCCTCTG 57.408 41.667 0.00 0.00 0.00 3.35
6525 8963 4.931027 TCTCTTGTACTACTCCCTCTGT 57.069 45.455 0.00 0.00 0.00 3.41
6526 8964 4.846040 TCTCTTGTACTACTCCCTCTGTC 58.154 47.826 0.00 0.00 0.00 3.51
6527 8965 3.949113 CTCTTGTACTACTCCCTCTGTCC 59.051 52.174 0.00 0.00 0.00 4.02
6528 8966 2.414994 TGTACTACTCCCTCTGTCCG 57.585 55.000 0.00 0.00 0.00 4.79
6529 8967 1.911357 TGTACTACTCCCTCTGTCCGA 59.089 52.381 0.00 0.00 0.00 4.55
6530 8968 2.306805 TGTACTACTCCCTCTGTCCGAA 59.693 50.000 0.00 0.00 0.00 4.30
6531 8969 2.599408 ACTACTCCCTCTGTCCGAAA 57.401 50.000 0.00 0.00 0.00 3.46
6532 8970 2.885616 ACTACTCCCTCTGTCCGAAAA 58.114 47.619 0.00 0.00 0.00 2.29
6533 8971 3.442076 ACTACTCCCTCTGTCCGAAAAT 58.558 45.455 0.00 0.00 0.00 1.82
6534 8972 4.607239 ACTACTCCCTCTGTCCGAAAATA 58.393 43.478 0.00 0.00 0.00 1.40
6535 8973 3.889520 ACTCCCTCTGTCCGAAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
6536 8974 3.442076 ACTCCCTCTGTCCGAAAATACT 58.558 45.455 0.00 0.00 0.00 2.12
6537 8975 3.838903 ACTCCCTCTGTCCGAAAATACTT 59.161 43.478 0.00 0.00 0.00 2.24
6538 8976 4.184629 CTCCCTCTGTCCGAAAATACTTG 58.815 47.826 0.00 0.00 0.00 3.16
6539 8977 3.581332 TCCCTCTGTCCGAAAATACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
6540 8978 3.933332 CCCTCTGTCCGAAAATACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
6541 8979 4.562757 CCCTCTGTCCGAAAATACTTGTCA 60.563 45.833 0.00 0.00 0.00 3.58
6542 8980 5.178797 CCTCTGTCCGAAAATACTTGTCAT 58.821 41.667 0.00 0.00 0.00 3.06
6543 8981 5.292101 CCTCTGTCCGAAAATACTTGTCATC 59.708 44.000 0.00 0.00 0.00 2.92
6544 8982 5.789521 TCTGTCCGAAAATACTTGTCATCA 58.210 37.500 0.00 0.00 0.00 3.07
6545 8983 6.227522 TCTGTCCGAAAATACTTGTCATCAA 58.772 36.000 0.00 0.00 0.00 2.57
6546 8984 6.708502 TCTGTCCGAAAATACTTGTCATCAAA 59.291 34.615 0.00 0.00 32.87 2.69
6547 8985 7.227711 TCTGTCCGAAAATACTTGTCATCAAAA 59.772 33.333 0.00 0.00 32.87 2.44
6548 8986 7.881142 TGTCCGAAAATACTTGTCATCAAAAT 58.119 30.769 0.00 0.00 32.87 1.82
6549 8987 9.004717 TGTCCGAAAATACTTGTCATCAAAATA 57.995 29.630 0.00 0.00 32.87 1.40
6550 8988 9.490663 GTCCGAAAATACTTGTCATCAAAATAG 57.509 33.333 0.00 0.00 32.87 1.73
6551 8989 9.443323 TCCGAAAATACTTGTCATCAAAATAGA 57.557 29.630 0.00 0.00 32.87 1.98
6574 9012 8.723942 AGATAAAAAGAGATGCATTTAGACGT 57.276 30.769 0.00 0.00 0.00 4.34
6575 9013 9.817809 AGATAAAAAGAGATGCATTTAGACGTA 57.182 29.630 0.00 0.00 0.00 3.57
6582 9020 9.601217 AAGAGATGCATTTAGACGTATTTTAGT 57.399 29.630 0.00 0.00 0.00 2.24
6583 9021 9.601217 AGAGATGCATTTAGACGTATTTTAGTT 57.399 29.630 0.00 0.00 0.00 2.24
6584 9022 9.851043 GAGATGCATTTAGACGTATTTTAGTTC 57.149 33.333 0.00 0.00 0.00 3.01
6585 9023 9.601217 AGATGCATTTAGACGTATTTTAGTTCT 57.399 29.630 0.00 0.00 0.00 3.01
6628 9066 8.741101 TCAATTTTGATGACAAGTATTTTCGG 57.259 30.769 0.00 0.00 37.32 4.30
6629 9067 8.572185 TCAATTTTGATGACAAGTATTTTCGGA 58.428 29.630 0.00 0.00 37.32 4.55
6630 9068 8.638565 CAATTTTGATGACAAGTATTTTCGGAC 58.361 33.333 0.00 0.00 37.32 4.79
6631 9069 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
6632 9070 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
6633 9071 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
6634 9072 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
6635 9073 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
6636 9074 2.564062 ACAAGTATTTTCGGACGGAGGA 59.436 45.455 0.00 0.00 0.00 3.71
6637 9075 3.007182 ACAAGTATTTTCGGACGGAGGAA 59.993 43.478 0.00 0.00 0.00 3.36
6638 9076 3.521947 AGTATTTTCGGACGGAGGAAG 57.478 47.619 0.00 0.00 0.00 3.46
6639 9077 2.830321 AGTATTTTCGGACGGAGGAAGT 59.170 45.455 0.00 0.00 0.00 3.01
6640 9078 4.019174 AGTATTTTCGGACGGAGGAAGTA 58.981 43.478 0.00 0.00 0.00 2.24
6641 9079 3.521947 ATTTTCGGACGGAGGAAGTAG 57.478 47.619 0.00 0.00 0.00 2.57
6642 9080 0.529378 TTTCGGACGGAGGAAGTAGC 59.471 55.000 0.00 0.00 0.00 3.58
6643 9081 0.323178 TTCGGACGGAGGAAGTAGCT 60.323 55.000 0.00 0.00 0.00 3.32
6644 9082 1.030488 TCGGACGGAGGAAGTAGCTG 61.030 60.000 0.00 0.00 0.00 4.24
6645 9083 1.313812 CGGACGGAGGAAGTAGCTGT 61.314 60.000 0.00 0.00 0.00 4.40
6646 9084 0.896226 GGACGGAGGAAGTAGCTGTT 59.104 55.000 0.00 0.00 0.00 3.16
6647 9085 1.275573 GGACGGAGGAAGTAGCTGTTT 59.724 52.381 0.00 0.00 0.00 2.83
6648 9086 2.289506 GGACGGAGGAAGTAGCTGTTTT 60.290 50.000 0.00 0.00 0.00 2.43
6649 9087 2.737252 GACGGAGGAAGTAGCTGTTTTG 59.263 50.000 0.00 0.00 0.00 2.44
6650 9088 2.076863 CGGAGGAAGTAGCTGTTTTGG 58.923 52.381 0.00 0.00 0.00 3.28
6651 9089 2.289444 CGGAGGAAGTAGCTGTTTTGGA 60.289 50.000 0.00 0.00 0.00 3.53
6652 9090 3.075148 GGAGGAAGTAGCTGTTTTGGAC 58.925 50.000 0.00 0.00 0.00 4.02
6653 9091 3.496160 GGAGGAAGTAGCTGTTTTGGACA 60.496 47.826 0.00 0.00 36.65 4.02
6654 9092 4.327680 GAGGAAGTAGCTGTTTTGGACAT 58.672 43.478 0.00 0.00 37.69 3.06
6655 9093 4.729868 AGGAAGTAGCTGTTTTGGACATT 58.270 39.130 0.00 0.00 37.69 2.71
6656 9094 4.762251 AGGAAGTAGCTGTTTTGGACATTC 59.238 41.667 0.00 0.00 37.69 2.67
6657 9095 4.762251 GGAAGTAGCTGTTTTGGACATTCT 59.238 41.667 0.00 0.00 37.69 2.40
6658 9096 5.241728 GGAAGTAGCTGTTTTGGACATTCTT 59.758 40.000 0.00 0.00 37.69 2.52
6659 9097 5.695851 AGTAGCTGTTTTGGACATTCTTG 57.304 39.130 0.00 0.00 37.69 3.02
6660 9098 5.376625 AGTAGCTGTTTTGGACATTCTTGA 58.623 37.500 0.00 0.00 37.69 3.02
6661 9099 6.006449 AGTAGCTGTTTTGGACATTCTTGAT 58.994 36.000 0.00 0.00 37.69 2.57
6662 9100 5.796424 AGCTGTTTTGGACATTCTTGATT 57.204 34.783 0.00 0.00 37.69 2.57
6663 9101 6.165700 AGCTGTTTTGGACATTCTTGATTT 57.834 33.333 0.00 0.00 37.69 2.17
6664 9102 7.288810 AGCTGTTTTGGACATTCTTGATTTA 57.711 32.000 0.00 0.00 37.69 1.40
6665 9103 7.725251 AGCTGTTTTGGACATTCTTGATTTAA 58.275 30.769 0.00 0.00 37.69 1.52
6666 9104 8.370182 AGCTGTTTTGGACATTCTTGATTTAAT 58.630 29.630 0.00 0.00 37.69 1.40
6667 9105 9.638239 GCTGTTTTGGACATTCTTGATTTAATA 57.362 29.630 0.00 0.00 37.69 0.98
6712 9150 4.718940 GCATTATTGTGCTACCAAAGGT 57.281 40.909 0.00 0.00 41.82 3.50
6713 9151 5.828299 GCATTATTGTGCTACCAAAGGTA 57.172 39.130 0.00 0.00 41.82 3.08
6714 9152 5.578776 GCATTATTGTGCTACCAAAGGTAC 58.421 41.667 0.00 0.00 41.82 3.34
6715 9153 5.357032 GCATTATTGTGCTACCAAAGGTACT 59.643 40.000 0.00 0.00 41.10 2.73
6716 9154 6.458342 GCATTATTGTGCTACCAAAGGTACTC 60.458 42.308 0.00 0.00 39.20 2.59
6717 9155 4.910458 ATTGTGCTACCAAAGGTACTCT 57.090 40.909 0.00 0.00 38.49 3.24
6718 9156 3.955650 TGTGCTACCAAAGGTACTCTC 57.044 47.619 0.00 0.00 38.49 3.20
6719 9157 3.236047 TGTGCTACCAAAGGTACTCTCA 58.764 45.455 0.00 0.00 38.49 3.27
6720 9158 3.258372 TGTGCTACCAAAGGTACTCTCAG 59.742 47.826 0.00 0.00 38.49 3.35
6721 9159 3.510360 GTGCTACCAAAGGTACTCTCAGA 59.490 47.826 0.00 0.00 38.49 3.27
6722 9160 4.021368 GTGCTACCAAAGGTACTCTCAGAA 60.021 45.833 0.00 0.00 38.49 3.02
6723 9161 4.591498 TGCTACCAAAGGTACTCTCAGAAA 59.409 41.667 0.00 0.00 38.49 2.52
6724 9162 5.172205 GCTACCAAAGGTACTCTCAGAAAG 58.828 45.833 0.00 0.00 38.49 2.62
6725 9163 5.279556 GCTACCAAAGGTACTCTCAGAAAGT 60.280 44.000 0.00 0.00 38.49 2.66
6726 9164 4.962155 ACCAAAGGTACTCTCAGAAAGTG 58.038 43.478 0.00 0.00 38.49 3.16
6727 9165 4.202367 ACCAAAGGTACTCTCAGAAAGTGG 60.202 45.833 0.00 0.00 38.49 4.00
6728 9166 4.202367 CCAAAGGTACTCTCAGAAAGTGGT 60.202 45.833 0.00 0.00 38.49 4.16
6729 9167 4.608948 AAGGTACTCTCAGAAAGTGGTG 57.391 45.455 0.00 0.00 38.49 4.17
6730 9168 2.900546 AGGTACTCTCAGAAAGTGGTGG 59.099 50.000 0.00 0.00 0.00 4.61
6731 9169 2.633481 GGTACTCTCAGAAAGTGGTGGT 59.367 50.000 0.00 0.00 0.00 4.16
6732 9170 3.071167 GGTACTCTCAGAAAGTGGTGGTT 59.929 47.826 0.00 0.00 0.00 3.67
6733 9171 3.933861 ACTCTCAGAAAGTGGTGGTTT 57.066 42.857 0.00 0.00 0.00 3.27
6734 9172 4.236527 ACTCTCAGAAAGTGGTGGTTTT 57.763 40.909 0.00 0.00 0.00 2.43
6735 9173 3.947834 ACTCTCAGAAAGTGGTGGTTTTG 59.052 43.478 0.00 0.00 0.00 2.44
6736 9174 3.947834 CTCTCAGAAAGTGGTGGTTTTGT 59.052 43.478 0.00 0.00 0.00 2.83
6737 9175 3.945285 TCTCAGAAAGTGGTGGTTTTGTC 59.055 43.478 0.00 0.00 0.00 3.18
6738 9176 3.020984 TCAGAAAGTGGTGGTTTTGTCC 58.979 45.455 0.00 0.00 0.00 4.02
6739 9177 2.757868 CAGAAAGTGGTGGTTTTGTCCA 59.242 45.455 0.00 0.00 34.85 4.02
6740 9178 3.194542 CAGAAAGTGGTGGTTTTGTCCAA 59.805 43.478 0.00 0.00 39.34 3.53
6741 9179 4.030216 AGAAAGTGGTGGTTTTGTCCAAT 58.970 39.130 0.00 0.00 39.34 3.16
6742 9180 3.817709 AAGTGGTGGTTTTGTCCAATG 57.182 42.857 0.00 0.00 39.34 2.82
6743 9181 3.025322 AGTGGTGGTTTTGTCCAATGA 57.975 42.857 0.00 0.00 39.34 2.57
6744 9182 3.575805 AGTGGTGGTTTTGTCCAATGAT 58.424 40.909 0.00 0.00 39.34 2.45
6745 9183 3.321682 AGTGGTGGTTTTGTCCAATGATG 59.678 43.478 0.00 0.00 39.34 3.07
6746 9184 3.320541 GTGGTGGTTTTGTCCAATGATGA 59.679 43.478 0.00 0.00 39.34 2.92
6747 9185 4.021192 GTGGTGGTTTTGTCCAATGATGAT 60.021 41.667 0.00 0.00 39.34 2.45
6748 9186 4.220382 TGGTGGTTTTGTCCAATGATGATC 59.780 41.667 0.00 0.00 39.34 2.92
6749 9187 4.414852 GTGGTTTTGTCCAATGATGATCG 58.585 43.478 0.00 0.00 39.34 3.69
6750 9188 4.155826 GTGGTTTTGTCCAATGATGATCGA 59.844 41.667 0.00 0.00 39.34 3.59
6751 9189 4.395854 TGGTTTTGTCCAATGATGATCGAG 59.604 41.667 0.00 0.00 34.24 4.04
6752 9190 4.396166 GGTTTTGTCCAATGATGATCGAGT 59.604 41.667 0.00 0.00 0.00 4.18
6753 9191 5.447818 GGTTTTGTCCAATGATGATCGAGTC 60.448 44.000 0.00 0.00 0.00 3.36
6754 9192 4.470334 TTGTCCAATGATGATCGAGTCA 57.530 40.909 0.00 0.00 42.06 3.41
6755 9193 4.470334 TGTCCAATGATGATCGAGTCAA 57.530 40.909 0.00 0.00 40.97 3.18
6756 9194 4.831107 TGTCCAATGATGATCGAGTCAAA 58.169 39.130 0.00 0.00 40.97 2.69
6757 9195 4.631377 TGTCCAATGATGATCGAGTCAAAC 59.369 41.667 0.00 0.00 40.97 2.93
6758 9196 4.872691 GTCCAATGATGATCGAGTCAAACT 59.127 41.667 0.00 0.00 40.97 2.66
6759 9197 5.352569 GTCCAATGATGATCGAGTCAAACTT 59.647 40.000 0.00 0.00 40.97 2.66
6760 9198 6.535150 GTCCAATGATGATCGAGTCAAACTTA 59.465 38.462 0.00 0.00 40.97 2.24
6761 9199 7.064609 GTCCAATGATGATCGAGTCAAACTTAA 59.935 37.037 0.00 0.00 40.97 1.85
6762 9200 7.770433 TCCAATGATGATCGAGTCAAACTTAAT 59.230 33.333 0.00 0.00 40.97 1.40
6763 9201 8.400947 CCAATGATGATCGAGTCAAACTTAATT 58.599 33.333 0.00 0.00 40.97 1.40
6764 9202 9.778993 CAATGATGATCGAGTCAAACTTAATTT 57.221 29.630 0.00 0.00 40.97 1.82
6766 9204 9.778993 ATGATGATCGAGTCAAACTTAATTTTG 57.221 29.630 11.07 11.07 40.97 2.44
6767 9205 8.236586 TGATGATCGAGTCAAACTTAATTTTGG 58.763 33.333 15.76 3.19 40.97 3.28
6768 9206 7.737972 TGATCGAGTCAAACTTAATTTTGGA 57.262 32.000 15.76 7.60 37.13 3.53
6769 9207 8.160521 TGATCGAGTCAAACTTAATTTTGGAA 57.839 30.769 15.76 0.00 37.13 3.53
6770 9208 8.289618 TGATCGAGTCAAACTTAATTTTGGAAG 58.710 33.333 15.76 7.60 37.13 3.46
6771 9209 7.795482 TCGAGTCAAACTTAATTTTGGAAGA 57.205 32.000 15.76 9.26 37.13 2.87
6772 9210 8.215926 TCGAGTCAAACTTAATTTTGGAAGAA 57.784 30.769 15.76 0.00 37.13 2.52
6773 9211 8.679100 TCGAGTCAAACTTAATTTTGGAAGAAA 58.321 29.630 15.76 0.00 37.13 2.52
6774 9212 9.296400 CGAGTCAAACTTAATTTTGGAAGAAAA 57.704 29.630 15.76 0.00 37.13 2.29
6792 9230 8.936070 GAAGAAAAAGTATCTTCTACCCTCTC 57.064 38.462 8.61 0.00 45.96 3.20
6793 9231 8.673456 AAGAAAAAGTATCTTCTACCCTCTCT 57.327 34.615 0.00 0.00 31.61 3.10
6794 9232 8.673456 AGAAAAAGTATCTTCTACCCTCTCTT 57.327 34.615 0.00 0.00 30.05 2.85
6795 9233 9.106977 AGAAAAAGTATCTTCTACCCTCTCTTT 57.893 33.333 0.00 0.00 30.05 2.52
6796 9234 9.157104 GAAAAAGTATCTTCTACCCTCTCTTTG 57.843 37.037 0.00 0.00 0.00 2.77
6797 9235 7.800300 AAAGTATCTTCTACCCTCTCTTTGT 57.200 36.000 0.00 0.00 0.00 2.83
6798 9236 7.800300 AAGTATCTTCTACCCTCTCTTTGTT 57.200 36.000 0.00 0.00 0.00 2.83
6799 9237 7.800300 AGTATCTTCTACCCTCTCTTTGTTT 57.200 36.000 0.00 0.00 0.00 2.83
6800 9238 8.896722 AGTATCTTCTACCCTCTCTTTGTTTA 57.103 34.615 0.00 0.00 0.00 2.01
6801 9239 9.495382 AGTATCTTCTACCCTCTCTTTGTTTAT 57.505 33.333 0.00 0.00 0.00 1.40
6804 9242 8.202461 TCTTCTACCCTCTCTTTGTTTATTGA 57.798 34.615 0.00 0.00 0.00 2.57
6805 9243 8.656806 TCTTCTACCCTCTCTTTGTTTATTGAA 58.343 33.333 0.00 0.00 0.00 2.69
6806 9244 8.617290 TTCTACCCTCTCTTTGTTTATTGAAC 57.383 34.615 0.00 0.00 38.78 3.18
6807 9245 7.974504 TCTACCCTCTCTTTGTTTATTGAACT 58.025 34.615 0.00 0.00 39.08 3.01
6808 9246 8.437575 TCTACCCTCTCTTTGTTTATTGAACTT 58.562 33.333 0.00 0.00 39.08 2.66
6809 9247 7.898014 ACCCTCTCTTTGTTTATTGAACTTT 57.102 32.000 0.00 0.00 39.08 2.66
6810 9248 8.990163 ACCCTCTCTTTGTTTATTGAACTTTA 57.010 30.769 0.00 0.00 39.08 1.85
6811 9249 9.588096 ACCCTCTCTTTGTTTATTGAACTTTAT 57.412 29.630 0.00 0.00 39.08 1.40
6825 9263 8.616799 ATTGAACTTTATCTTCTACCCTCTCT 57.383 34.615 0.00 0.00 0.00 3.10
6826 9264 8.437274 TTGAACTTTATCTTCTACCCTCTCTT 57.563 34.615 0.00 0.00 0.00 2.85
6827 9265 9.543231 TTGAACTTTATCTTCTACCCTCTCTTA 57.457 33.333 0.00 0.00 0.00 2.10
6828 9266 9.191479 TGAACTTTATCTTCTACCCTCTCTTAG 57.809 37.037 0.00 0.00 0.00 2.18
6829 9267 9.192642 GAACTTTATCTTCTACCCTCTCTTAGT 57.807 37.037 0.00 0.00 0.00 2.24
6830 9268 8.756486 ACTTTATCTTCTACCCTCTCTTAGTC 57.244 38.462 0.00 0.00 0.00 2.59
6831 9269 8.562635 ACTTTATCTTCTACCCTCTCTTAGTCT 58.437 37.037 0.00 0.00 0.00 3.24
6832 9270 8.983702 TTTATCTTCTACCCTCTCTTAGTCTC 57.016 38.462 0.00 0.00 0.00 3.36
6833 9271 6.841781 ATCTTCTACCCTCTCTTAGTCTCT 57.158 41.667 0.00 0.00 0.00 3.10
6834 9272 6.243216 TCTTCTACCCTCTCTTAGTCTCTC 57.757 45.833 0.00 0.00 0.00 3.20
6835 9273 5.131475 TCTTCTACCCTCTCTTAGTCTCTCC 59.869 48.000 0.00 0.00 0.00 3.71
6836 9274 4.637600 TCTACCCTCTCTTAGTCTCTCCT 58.362 47.826 0.00 0.00 0.00 3.69
6837 9275 5.041015 TCTACCCTCTCTTAGTCTCTCCTT 58.959 45.833 0.00 0.00 0.00 3.36
6838 9276 4.685513 ACCCTCTCTTAGTCTCTCCTTT 57.314 45.455 0.00 0.00 0.00 3.11
6839 9277 4.349365 ACCCTCTCTTAGTCTCTCCTTTG 58.651 47.826 0.00 0.00 0.00 2.77
6840 9278 3.132111 CCCTCTCTTAGTCTCTCCTTTGC 59.868 52.174 0.00 0.00 0.00 3.68
6841 9279 3.132111 CCTCTCTTAGTCTCTCCTTTGCC 59.868 52.174 0.00 0.00 0.00 4.52
6842 9280 3.766591 CTCTCTTAGTCTCTCCTTTGCCA 59.233 47.826 0.00 0.00 0.00 4.92
6843 9281 4.160329 TCTCTTAGTCTCTCCTTTGCCAA 58.840 43.478 0.00 0.00 0.00 4.52
6844 9282 4.021016 TCTCTTAGTCTCTCCTTTGCCAAC 60.021 45.833 0.00 0.00 0.00 3.77
6845 9283 3.646162 TCTTAGTCTCTCCTTTGCCAACA 59.354 43.478 0.00 0.00 0.00 3.33
6846 9284 4.102524 TCTTAGTCTCTCCTTTGCCAACAA 59.897 41.667 0.00 0.00 0.00 2.83
6847 9285 3.515602 AGTCTCTCCTTTGCCAACAAT 57.484 42.857 0.00 0.00 35.21 2.71
6848 9286 3.416156 AGTCTCTCCTTTGCCAACAATC 58.584 45.455 0.00 0.00 35.21 2.67
6849 9287 3.073650 AGTCTCTCCTTTGCCAACAATCT 59.926 43.478 0.00 0.00 35.21 2.40
6850 9288 3.438434 GTCTCTCCTTTGCCAACAATCTC 59.562 47.826 0.00 0.00 35.21 2.75
6851 9289 2.417933 CTCTCCTTTGCCAACAATCTCG 59.582 50.000 0.00 0.00 35.21 4.04
6852 9290 1.470098 CTCCTTTGCCAACAATCTCGG 59.530 52.381 0.00 0.00 35.21 4.63
6853 9291 0.109132 CCTTTGCCAACAATCTCGGC 60.109 55.000 0.00 0.00 46.43 5.54
6854 9292 0.883833 CTTTGCCAACAATCTCGGCT 59.116 50.000 0.00 0.00 46.39 5.52
6855 9293 1.270550 CTTTGCCAACAATCTCGGCTT 59.729 47.619 0.00 0.00 46.39 4.35
6856 9294 2.192664 TTGCCAACAATCTCGGCTTA 57.807 45.000 0.00 0.00 46.39 3.09
6857 9295 2.418368 TGCCAACAATCTCGGCTTAT 57.582 45.000 0.00 0.00 46.39 1.73
6858 9296 2.288666 TGCCAACAATCTCGGCTTATC 58.711 47.619 0.00 0.00 46.39 1.75
6859 9297 2.092968 TGCCAACAATCTCGGCTTATCT 60.093 45.455 0.00 0.00 46.39 1.98
6860 9298 3.133901 TGCCAACAATCTCGGCTTATCTA 59.866 43.478 0.00 0.00 46.39 1.98
6861 9299 3.495001 GCCAACAATCTCGGCTTATCTAC 59.505 47.826 0.00 0.00 42.78 2.59
6862 9300 4.058817 CCAACAATCTCGGCTTATCTACC 58.941 47.826 0.00 0.00 0.00 3.18
6863 9301 4.058817 CAACAATCTCGGCTTATCTACCC 58.941 47.826 0.00 0.00 0.00 3.69
6864 9302 3.577919 ACAATCTCGGCTTATCTACCCT 58.422 45.455 0.00 0.00 0.00 4.34
6865 9303 3.322254 ACAATCTCGGCTTATCTACCCTG 59.678 47.826 0.00 0.00 0.00 4.45
6866 9304 1.329256 TCTCGGCTTATCTACCCTGC 58.671 55.000 0.00 0.00 0.00 4.85
6867 9305 0.318762 CTCGGCTTATCTACCCTGCC 59.681 60.000 0.00 0.00 40.14 4.85
6868 9306 1.119574 TCGGCTTATCTACCCTGCCC 61.120 60.000 0.00 0.00 40.40 5.36
6869 9307 1.761822 GGCTTATCTACCCTGCCCC 59.238 63.158 0.00 0.00 37.81 5.80
6870 9308 1.761822 GCTTATCTACCCTGCCCCC 59.238 63.158 0.00 0.00 0.00 5.40
6871 9309 0.768609 GCTTATCTACCCTGCCCCCT 60.769 60.000 0.00 0.00 0.00 4.79
6872 9310 1.353091 CTTATCTACCCTGCCCCCTC 58.647 60.000 0.00 0.00 0.00 4.30
6873 9311 0.104620 TTATCTACCCTGCCCCCTCC 60.105 60.000 0.00 0.00 0.00 4.30
6874 9312 2.044777 TATCTACCCTGCCCCCTCCC 62.045 65.000 0.00 0.00 0.00 4.30
6875 9313 4.109656 CTACCCTGCCCCCTCCCT 62.110 72.222 0.00 0.00 0.00 4.20
6876 9314 4.103928 TACCCTGCCCCCTCCCTC 62.104 72.222 0.00 0.00 0.00 4.30
6896 9334 4.135153 CCGCGTCACCCTCCTCTG 62.135 72.222 4.92 0.00 0.00 3.35
6897 9335 3.062466 CGCGTCACCCTCCTCTGA 61.062 66.667 0.00 0.00 0.00 3.27
6898 9336 2.574399 GCGTCACCCTCCTCTGAC 59.426 66.667 0.00 0.00 34.57 3.51
6902 9340 0.894184 GTCACCCTCCTCTGACGACA 60.894 60.000 0.00 0.00 0.00 4.35
6907 9345 1.606601 CTCCTCTGACGACACCCCA 60.607 63.158 0.00 0.00 0.00 4.96
6908 9346 1.152419 TCCTCTGACGACACCCCAA 60.152 57.895 0.00 0.00 0.00 4.12
6914 9352 1.331399 TGACGACACCCCAAGACACA 61.331 55.000 0.00 0.00 0.00 3.72
6930 9368 4.814294 CACCGCCCGCCACTCTAC 62.814 72.222 0.00 0.00 0.00 2.59
6933 9371 3.771160 CGCCCGCCACTCTACCTT 61.771 66.667 0.00 0.00 0.00 3.50
7020 9458 3.812019 CACGCGTCTCTAGCCGGT 61.812 66.667 9.86 0.00 0.00 5.28
7048 9489 0.820074 CCTGTCTCGCTATCCTCGGT 60.820 60.000 0.00 0.00 0.00 4.69
7052 9493 2.515290 TCGCTATCCTCGGTCGCA 60.515 61.111 0.00 0.00 0.00 5.10
7068 9509 3.801997 CAGCGAATGCCCCTCCCT 61.802 66.667 0.00 0.00 44.31 4.20
7071 9512 2.742116 GCGAATGCCCCTCCCTACA 61.742 63.158 0.00 0.00 33.98 2.74
7082 9525 4.798682 CCCTACACGCCTCCCCCT 62.799 72.222 0.00 0.00 0.00 4.79
7130 9582 3.962530 ATTCTCGGGCCCCCTCCAA 62.963 63.158 18.66 2.11 0.00 3.53
7322 9782 1.771073 CGGCGTGTCTTTGCTTGTGA 61.771 55.000 0.00 0.00 0.00 3.58
7330 9790 2.290641 GTCTTTGCTTGTGATGTTCCGT 59.709 45.455 0.00 0.00 0.00 4.69
7346 9806 4.374645 GTCCCCGGCGGCTATAGC 62.375 72.222 23.20 16.78 41.14 2.97
7436 9896 2.193248 GCGCCCCTTCCAGCTTAT 59.807 61.111 0.00 0.00 0.00 1.73
7453 9913 4.769488 AGCTTATCTGGCTAATCGAGATCA 59.231 41.667 0.00 0.00 40.21 2.92
7454 9914 5.421693 AGCTTATCTGGCTAATCGAGATCAT 59.578 40.000 0.00 0.00 40.21 2.45
7474 9934 2.280524 CGGTCAAGGCCACGACAA 60.281 61.111 21.93 0.00 33.66 3.18
7492 9952 0.320771 AACTCGGATCTGCGTGCTTT 60.321 50.000 0.00 0.00 0.00 3.51
7494 9954 1.746727 CTCGGATCTGCGTGCTTTCG 61.747 60.000 0.00 0.00 0.00 3.46
7689 11615 2.705658 TGACTCAGTGATTCCAACCAGT 59.294 45.455 7.92 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 8.417780 ACTCTGATAAATTTGACGAAGATCAG 57.582 34.615 14.61 14.61 39.98 2.90
39 40 7.148869 GGGTGAACGGAAATTTTTAGAAATTCG 60.149 37.037 4.58 7.48 42.97 3.34
52 53 1.279271 CCAGAGAGGGTGAACGGAAAT 59.721 52.381 0.00 0.00 0.00 2.17
54 55 2.362242 CCAGAGAGGGTGAACGGAA 58.638 57.895 0.00 0.00 0.00 4.30
75 78 1.208358 GGTGAAAGCGCGGGTTTAC 59.792 57.895 8.83 4.84 33.25 2.01
108 111 4.653341 AGGTTTGTTGGGTCATTTTGATGA 59.347 37.500 0.00 0.00 0.00 2.92
119 122 2.223803 TTGTGTCAGGTTTGTTGGGT 57.776 45.000 0.00 0.00 0.00 4.51
127 130 1.237285 GCCGAGCATTGTGTCAGGTT 61.237 55.000 0.00 0.00 0.00 3.50
146 149 5.525378 GTCACTAACAAATGGCTCTATCTGG 59.475 44.000 0.00 0.00 0.00 3.86
215 218 3.004419 CGCCGATGATAAACACCTAGAGA 59.996 47.826 0.00 0.00 0.00 3.10
219 222 1.539496 GGCGCCGATGATAAACACCTA 60.539 52.381 12.58 0.00 0.00 3.08
236 239 1.268899 CTAACCCTACCGTCATAGGCG 59.731 57.143 0.00 0.00 40.56 5.52
239 242 3.005578 GCCTTCTAACCCTACCGTCATAG 59.994 52.174 0.00 0.00 0.00 2.23
241 244 1.761198 GCCTTCTAACCCTACCGTCAT 59.239 52.381 0.00 0.00 0.00 3.06
273 276 1.523758 GTGTCAAAGTAGGCCACTGG 58.476 55.000 5.01 3.46 37.63 4.00
305 314 1.771255 AGACCCCCAGCTATGTCATTC 59.229 52.381 0.00 0.00 0.00 2.67
339 354 5.422214 CGAAGGTAGGATTAATGGGCTAT 57.578 43.478 0.00 0.00 0.00 2.97
357 372 0.178533 TACCGCCAAATACCCCGAAG 59.821 55.000 0.00 0.00 0.00 3.79
383 400 2.519013 AGTTTGCTCAGATTTGACCCC 58.481 47.619 0.00 0.00 0.00 4.95
384 401 4.590850 AAAGTTTGCTCAGATTTGACCC 57.409 40.909 0.00 0.00 0.00 4.46
406 424 3.897239 TGACCTTGTCTGACCATGTTTT 58.103 40.909 5.17 0.00 33.15 2.43
597 642 3.890147 TGGTTACAAGTTTAATGGCGGTT 59.110 39.130 0.00 0.00 0.00 4.44
661 712 3.412386 TGGCTGTAAAAGAAGAGAAGGC 58.588 45.455 0.00 0.00 0.00 4.35
843 894 3.844090 GACGAGGCCTGGAGGAGC 61.844 72.222 23.01 0.00 37.39 4.70
850 901 4.803426 GCACGAGGACGAGGCCTG 62.803 72.222 12.00 5.11 42.66 4.85
854 905 2.179517 GAGTGCACGAGGACGAGG 59.820 66.667 12.01 0.00 41.52 4.63
855 906 2.179517 GGAGTGCACGAGGACGAG 59.820 66.667 12.01 0.00 41.52 4.18
914 966 1.967319 TTCTGCAGGTGACAAAGGAC 58.033 50.000 15.13 0.00 0.00 3.85
1127 1179 0.605083 GCCTTGGAAAAAGCTGGGAG 59.395 55.000 0.00 0.00 0.00 4.30
1252 1307 7.050377 CCTATCAACACCTTAGATCAATGTGT 58.950 38.462 10.71 10.71 44.78 3.72
1253 1308 6.017605 GCCTATCAACACCTTAGATCAATGTG 60.018 42.308 0.00 3.99 38.37 3.21
1403 1458 6.447162 CGTAAGCATATCAACTACTCATGGA 58.553 40.000 0.00 0.00 0.00 3.41
1404 1459 6.696825 CGTAAGCATATCAACTACTCATGG 57.303 41.667 0.00 0.00 0.00 3.66
1426 1484 3.499537 ACATTATCACCATGTATGCTGCG 59.500 43.478 0.00 0.00 32.88 5.18
1427 1485 4.083110 GGACATTATCACCATGTATGCTGC 60.083 45.833 0.00 0.00 34.89 5.25
1428 1486 5.065235 TGGACATTATCACCATGTATGCTG 58.935 41.667 0.00 0.00 34.89 4.41
1431 1489 7.933215 ATGATGGACATTATCACCATGTATG 57.067 36.000 0.00 0.00 43.30 2.39
1432 1490 8.165397 TCAATGATGGACATTATCACCATGTAT 58.835 33.333 0.00 0.00 46.01 2.29
1433 1491 7.445096 GTCAATGATGGACATTATCACCATGTA 59.555 37.037 0.00 0.00 46.01 2.29
1434 1492 6.263842 GTCAATGATGGACATTATCACCATGT 59.736 38.462 0.00 0.00 46.01 3.21
1484 1924 8.729805 AAAAAGATAACCAAGCTGATCTAGAG 57.270 34.615 0.00 0.00 0.00 2.43
1518 1963 4.789012 ATTGTTTCCAGTGGTAATGCAG 57.211 40.909 9.54 0.00 0.00 4.41
1524 1969 5.389520 TGGAATCAATTGTTTCCAGTGGTA 58.610 37.500 32.97 18.09 44.52 3.25
1580 2025 0.933097 CTGGCATGATGTCACGCTAC 59.067 55.000 0.00 0.00 35.13 3.58
1581 2026 0.823460 TCTGGCATGATGTCACGCTA 59.177 50.000 0.00 0.00 35.13 4.26
1634 3141 6.140110 TCTCTTTATTTGTACAAGTTTGCGC 58.860 36.000 9.05 0.00 0.00 6.09
1695 3321 4.757149 ACTTCTGAAGGCATGACTAAACAC 59.243 41.667 20.61 0.00 0.00 3.32
2003 3640 2.202987 GAGCAGCTGATCACCCCG 60.203 66.667 26.46 0.00 0.00 5.73
2028 3671 1.492176 AGGGATGGATCGACATTTGCT 59.508 47.619 0.00 0.00 0.00 3.91
2641 4418 7.098477 ACGTAAACAGCCATACATTAACAGTA 58.902 34.615 0.00 0.00 0.00 2.74
2943 4723 0.738975 TCACCGCTACTGAATCTCCG 59.261 55.000 0.00 0.00 0.00 4.63
2964 4744 9.632807 TGTGCACTTTTGTATTTGGTATTAATC 57.367 29.630 19.41 0.00 0.00 1.75
2972 4752 7.598118 TGATTGTATGTGCACTTTTGTATTTGG 59.402 33.333 19.41 0.00 0.00 3.28
2981 4762 6.294176 GGAAAGACTGATTGTATGTGCACTTT 60.294 38.462 19.41 8.24 0.00 2.66
3029 4810 4.283978 TGAACCTGCATGAAAATGGTGATT 59.716 37.500 0.00 0.00 0.00 2.57
3157 4941 4.952335 TCAACCTACCCTAACTAGTAGTGC 59.048 45.833 2.90 0.00 35.25 4.40
3189 5037 0.249699 TCGAAGCAAGCAACGAAGGA 60.250 50.000 10.09 0.00 0.00 3.36
3269 5340 7.953752 AGACTTATATTTAGAAACGGAGGGAG 58.046 38.462 0.00 0.00 0.00 4.30
3270 5341 7.909485 AGACTTATATTTAGAAACGGAGGGA 57.091 36.000 0.00 0.00 0.00 4.20
3271 5342 8.959705 AAAGACTTATATTTAGAAACGGAGGG 57.040 34.615 0.00 0.00 0.00 4.30
3290 5361 9.660180 GTCCATACTGAAATCTCTAAAAAGACT 57.340 33.333 0.00 0.00 0.00 3.24
3291 5362 9.660180 AGTCCATACTGAAATCTCTAAAAAGAC 57.340 33.333 0.00 0.00 33.57 3.01
3309 5380 5.961396 AGACATCCGTATGTAGTCCATAC 57.039 43.478 0.00 0.00 46.49 2.39
3310 5381 8.765517 TCTATAGACATCCGTATGTAGTCCATA 58.234 37.037 0.00 0.00 46.49 2.74
3311 5382 7.553402 GTCTATAGACATCCGTATGTAGTCCAT 59.447 40.741 24.97 0.00 46.49 3.41
3312 5383 6.877855 GTCTATAGACATCCGTATGTAGTCCA 59.122 42.308 24.97 0.00 46.49 4.02
3313 5384 7.306205 GTCTATAGACATCCGTATGTAGTCC 57.694 44.000 24.97 0.00 46.49 3.85
3327 5398 7.829706 ACACACTCTGAAGTATGTCTATAGACA 59.170 37.037 32.17 32.17 38.83 3.41
3328 5399 8.215926 ACACACTCTGAAGTATGTCTATAGAC 57.784 38.462 23.53 23.53 38.83 2.59
3329 5400 9.549078 CTACACACTCTGAAGTATGTCTATAGA 57.451 37.037 0.00 0.00 38.83 1.98
3330 5401 9.549078 TCTACACACTCTGAAGTATGTCTATAG 57.451 37.037 0.00 0.00 38.83 1.31
3332 5403 8.988546 ATCTACACACTCTGAAGTATGTCTAT 57.011 34.615 0.00 0.00 38.83 1.98
3333 5404 8.809468 AATCTACACACTCTGAAGTATGTCTA 57.191 34.615 0.00 0.00 38.83 2.59
3334 5405 7.394641 TGAATCTACACACTCTGAAGTATGTCT 59.605 37.037 0.00 0.00 38.83 3.41
3335 5406 7.486551 GTGAATCTACACACTCTGAAGTATGTC 59.513 40.741 0.00 0.00 38.83 3.06
3336 5407 7.177568 AGTGAATCTACACACTCTGAAGTATGT 59.822 37.037 0.00 0.00 45.03 2.29
3337 5408 7.542890 AGTGAATCTACACACTCTGAAGTATG 58.457 38.462 0.00 0.00 42.61 2.39
3338 5409 7.710676 AGTGAATCTACACACTCTGAAGTAT 57.289 36.000 0.00 0.00 42.61 2.12
3348 5419 6.246420 AGCAAAATGAGTGAATCTACACAC 57.754 37.500 0.00 0.00 42.45 3.82
3349 5420 5.412594 GGAGCAAAATGAGTGAATCTACACA 59.587 40.000 0.00 0.00 42.45 3.72
3350 5421 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3351 5422 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3352 5423 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3353 5424 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3354 5425 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3355 5426 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3356 5427 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3357 5428 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3358 5429 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3359 5430 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3360 5431 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3361 5432 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
3362 5433 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
3363 5434 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
3364 5435 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
3365 5436 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
3366 5437 5.801531 ATATGGACTACATACGGAGCAAA 57.198 39.130 0.00 0.00 44.41 3.68
3367 5438 5.510690 CCAATATGGACTACATACGGAGCAA 60.511 44.000 0.00 0.00 44.41 3.91
3368 5439 4.021456 CCAATATGGACTACATACGGAGCA 60.021 45.833 0.00 0.00 44.41 4.26
3369 5440 4.219944 TCCAATATGGACTACATACGGAGC 59.780 45.833 0.00 0.00 42.67 4.70
3370 5441 5.977489 TCCAATATGGACTACATACGGAG 57.023 43.478 0.00 0.00 42.67 4.63
3382 5453 8.789767 AGTCTTTCTAGAGATTCCAATATGGA 57.210 34.615 0.00 0.00 46.61 3.41
3400 5471 9.508642 CCCTCCATTCCTAAATATAAGTCTTTC 57.491 37.037 0.00 0.00 0.00 2.62
3401 5472 9.237706 TCCCTCCATTCCTAAATATAAGTCTTT 57.762 33.333 0.00 0.00 0.00 2.52
3402 5473 8.814448 TCCCTCCATTCCTAAATATAAGTCTT 57.186 34.615 0.00 0.00 0.00 3.01
3403 5474 8.019652 ACTCCCTCCATTCCTAAATATAAGTCT 58.980 37.037 0.00 0.00 0.00 3.24
3404 5475 8.208575 ACTCCCTCCATTCCTAAATATAAGTC 57.791 38.462 0.00 0.00 0.00 3.01
3405 5476 9.860393 ATACTCCCTCCATTCCTAAATATAAGT 57.140 33.333 0.00 0.00 0.00 2.24
3411 5482 8.997301 AGATAATACTCCCTCCATTCCTAAAT 57.003 34.615 0.00 0.00 0.00 1.40
3412 5483 8.814448 AAGATAATACTCCCTCCATTCCTAAA 57.186 34.615 0.00 0.00 0.00 1.85
3415 5486 9.722317 CTATAAGATAATACTCCCTCCATTCCT 57.278 37.037 0.00 0.00 0.00 3.36
3416 5487 8.929487 CCTATAAGATAATACTCCCTCCATTCC 58.071 40.741 0.00 0.00 0.00 3.01
3417 5488 9.495382 ACCTATAAGATAATACTCCCTCCATTC 57.505 37.037 0.00 0.00 0.00 2.67
3418 5489 9.860393 AACCTATAAGATAATACTCCCTCCATT 57.140 33.333 0.00 0.00 0.00 3.16
3419 5490 9.273137 CAACCTATAAGATAATACTCCCTCCAT 57.727 37.037 0.00 0.00 0.00 3.41
3420 5491 7.678598 CCAACCTATAAGATAATACTCCCTCCA 59.321 40.741 0.00 0.00 0.00 3.86
3421 5492 7.679025 ACCAACCTATAAGATAATACTCCCTCC 59.321 40.741 0.00 0.00 0.00 4.30
3422 5493 8.667592 ACCAACCTATAAGATAATACTCCCTC 57.332 38.462 0.00 0.00 0.00 4.30
3423 5494 8.465971 AGACCAACCTATAAGATAATACTCCCT 58.534 37.037 0.00 0.00 0.00 4.20
3424 5495 8.667592 AGACCAACCTATAAGATAATACTCCC 57.332 38.462 0.00 0.00 0.00 4.30
3427 5498 8.804204 CGGAAGACCAACCTATAAGATAATACT 58.196 37.037 0.00 0.00 35.59 2.12
3428 5499 8.583296 ACGGAAGACCAACCTATAAGATAATAC 58.417 37.037 0.00 0.00 35.59 1.89
3429 5500 8.582437 CACGGAAGACCAACCTATAAGATAATA 58.418 37.037 0.00 0.00 35.59 0.98
3430 5501 7.442656 CACGGAAGACCAACCTATAAGATAAT 58.557 38.462 0.00 0.00 35.59 1.28
3452 5523 2.595536 GCAAAGCATATTGTTCTGCACG 59.404 45.455 0.00 0.00 40.88 5.34
3570 5643 2.519771 TGCAAGGAGGCTGATTCAAT 57.480 45.000 0.00 0.00 34.04 2.57
3811 5894 7.678947 AGCATATGCATCCTACATAAAGAAC 57.321 36.000 28.62 0.00 45.16 3.01
3996 6098 2.031495 ACTGCAGGTTTCCCTCTACT 57.969 50.000 19.93 0.00 39.89 2.57
4089 6239 3.377573 ACATGCTGCCCCAAATAATCTT 58.622 40.909 0.00 0.00 0.00 2.40
4266 6416 6.368516 GCAGATGAGAGCCTAGACATTTATTC 59.631 42.308 0.00 0.00 0.00 1.75
4290 6440 7.810282 ACGAGACAGACAATAGTTATATGATGC 59.190 37.037 0.00 0.00 0.00 3.91
4307 6457 1.605232 TGCGTCAAACTACGAGACAGA 59.395 47.619 0.00 0.00 45.68 3.41
4308 6458 1.979469 CTGCGTCAAACTACGAGACAG 59.021 52.381 0.00 0.00 45.68 3.51
4365 6517 2.069273 CAGCAGTAACAGTACCAGCAC 58.931 52.381 0.00 0.00 35.35 4.40
4462 6614 4.669206 ATCATGCAGTGGTTTCAAAACA 57.331 36.364 7.82 0.00 40.63 2.83
4468 6620 6.441093 TTCAGAATATCATGCAGTGGTTTC 57.559 37.500 0.00 0.00 0.00 2.78
4568 6720 6.641169 TGCAGGACAACAATAACACAAATA 57.359 33.333 0.00 0.00 0.00 1.40
4654 6809 5.157067 GCTGAAGTAAAAACATTCTGAGCC 58.843 41.667 0.00 0.00 0.00 4.70
4742 6899 0.981183 ACACAATAGGAACCTCGGCA 59.019 50.000 0.00 0.00 0.00 5.69
4743 6900 2.973694 TACACAATAGGAACCTCGGC 57.026 50.000 0.00 0.00 0.00 5.54
4744 6901 7.046033 AGTTTAATACACAATAGGAACCTCGG 58.954 38.462 0.00 0.00 0.00 4.63
4745 6902 8.488651 AAGTTTAATACACAATAGGAACCTCG 57.511 34.615 0.00 0.00 0.00 4.63
4908 7074 1.971357 AGGGAGTACATAGAATGCCCG 59.029 52.381 0.00 0.00 34.98 6.13
4994 7160 7.505585 ACCATCACTATTCCACTCAAAAGAAAA 59.494 33.333 0.00 0.00 0.00 2.29
5011 7177 4.623814 GCTGCAGCACCATCACTA 57.376 55.556 33.36 0.00 41.59 2.74
5366 7533 2.903135 GAGGACTCTAGGCCAGCATTAT 59.097 50.000 5.01 0.00 0.00 1.28
5367 7534 2.091055 AGAGGACTCTAGGCCAGCATTA 60.091 50.000 5.01 0.00 38.35 1.90
5619 7787 7.170998 CGAGTCACAGTAACCAAGATTTAGTTT 59.829 37.037 0.00 0.00 0.00 2.66
5676 7847 6.199376 TGGGAGTTGTAACTATCATCTGGTA 58.801 40.000 0.00 0.00 39.88 3.25
5678 7849 5.614324 TGGGAGTTGTAACTATCATCTGG 57.386 43.478 0.00 0.00 39.88 3.86
5711 7966 2.094675 TCTTTTCCTGCAAGCATAGCC 58.905 47.619 0.00 0.00 0.00 3.93
6015 8452 1.879380 TGGACGCAAAAAGGAGTCATG 59.121 47.619 0.00 0.00 39.06 3.07
6016 8453 2.270352 TGGACGCAAAAAGGAGTCAT 57.730 45.000 0.00 0.00 39.06 3.06
6149 8587 6.402222 ACATCTGAACAAGTGAGGATAGAAC 58.598 40.000 0.00 0.00 0.00 3.01
6253 8691 9.712305 CTAAGAACCTATTGAGAAGAAAGAACA 57.288 33.333 0.00 0.00 0.00 3.18
6362 8800 2.289882 CCATCTTTGGTGTCAGAGCTCA 60.290 50.000 17.77 0.00 38.30 4.26
6500 8938 6.726764 ACAGAGGGAGTAGTACAAGAGAAAAT 59.273 38.462 2.52 0.00 0.00 1.82
6507 8945 2.683867 CGGACAGAGGGAGTAGTACAAG 59.316 54.545 2.52 0.00 0.00 3.16
6513 8951 4.645588 AGTATTTTCGGACAGAGGGAGTAG 59.354 45.833 0.00 0.00 0.00 2.57
6514 8952 4.607239 AGTATTTTCGGACAGAGGGAGTA 58.393 43.478 0.00 0.00 0.00 2.59
6515 8953 3.442076 AGTATTTTCGGACAGAGGGAGT 58.558 45.455 0.00 0.00 0.00 3.85
6516 8954 4.184629 CAAGTATTTTCGGACAGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
6517 8955 3.581332 ACAAGTATTTTCGGACAGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
6518 8956 3.933332 GACAAGTATTTTCGGACAGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
6519 8957 4.566004 TGACAAGTATTTTCGGACAGAGG 58.434 43.478 0.00 0.00 0.00 3.69
6520 8958 5.869344 TGATGACAAGTATTTTCGGACAGAG 59.131 40.000 0.00 0.00 0.00 3.35
6521 8959 5.789521 TGATGACAAGTATTTTCGGACAGA 58.210 37.500 0.00 0.00 0.00 3.41
6522 8960 6.480524 TTGATGACAAGTATTTTCGGACAG 57.519 37.500 0.00 0.00 0.00 3.51
6523 8961 6.869315 TTTGATGACAAGTATTTTCGGACA 57.131 33.333 0.00 0.00 37.32 4.02
6524 8962 9.490663 CTATTTTGATGACAAGTATTTTCGGAC 57.509 33.333 0.00 0.00 37.32 4.79
6525 8963 9.443323 TCTATTTTGATGACAAGTATTTTCGGA 57.557 29.630 0.00 0.00 37.32 4.55
6548 8986 9.817809 ACGTCTAAATGCATCTCTTTTTATCTA 57.182 29.630 0.00 0.00 0.00 1.98
6549 8987 8.723942 ACGTCTAAATGCATCTCTTTTTATCT 57.276 30.769 0.00 0.00 0.00 1.98
6556 8994 9.601217 ACTAAAATACGTCTAAATGCATCTCTT 57.399 29.630 0.00 0.00 0.00 2.85
6557 8995 9.601217 AACTAAAATACGTCTAAATGCATCTCT 57.399 29.630 0.00 0.00 0.00 3.10
6558 8996 9.851043 GAACTAAAATACGTCTAAATGCATCTC 57.149 33.333 0.00 0.00 0.00 2.75
6559 8997 9.601217 AGAACTAAAATACGTCTAAATGCATCT 57.399 29.630 0.00 0.00 0.00 2.90
6603 9041 8.572185 TCCGAAAATACTTGTCATCAAAATTGA 58.428 29.630 0.00 0.00 42.14 2.57
6604 9042 8.638565 GTCCGAAAATACTTGTCATCAAAATTG 58.361 33.333 0.00 0.00 32.87 2.32
6605 9043 7.537306 CGTCCGAAAATACTTGTCATCAAAATT 59.463 33.333 0.00 0.00 32.87 1.82
6606 9044 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
6607 9045 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
6608 9046 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
6609 9047 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
6610 9048 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
6611 9049 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
6612 9050 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
6613 9051 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
6614 9052 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
6615 9053 2.564062 TCCTCCGTCCGAAAATACTTGT 59.436 45.455 0.00 0.00 0.00 3.16
6616 9054 3.241067 TCCTCCGTCCGAAAATACTTG 57.759 47.619 0.00 0.00 0.00 3.16
6617 9055 3.260128 ACTTCCTCCGTCCGAAAATACTT 59.740 43.478 0.00 0.00 0.00 2.24
6618 9056 2.830321 ACTTCCTCCGTCCGAAAATACT 59.170 45.455 0.00 0.00 0.00 2.12
6619 9057 3.242549 ACTTCCTCCGTCCGAAAATAC 57.757 47.619 0.00 0.00 0.00 1.89
6620 9058 3.181483 GCTACTTCCTCCGTCCGAAAATA 60.181 47.826 0.00 0.00 0.00 1.40
6621 9059 2.418334 GCTACTTCCTCCGTCCGAAAAT 60.418 50.000 0.00 0.00 0.00 1.82
6622 9060 1.067354 GCTACTTCCTCCGTCCGAAAA 60.067 52.381 0.00 0.00 0.00 2.29
6623 9061 0.529378 GCTACTTCCTCCGTCCGAAA 59.471 55.000 0.00 0.00 0.00 3.46
6624 9062 0.323178 AGCTACTTCCTCCGTCCGAA 60.323 55.000 0.00 0.00 0.00 4.30
6625 9063 1.030488 CAGCTACTTCCTCCGTCCGA 61.030 60.000 0.00 0.00 0.00 4.55
6626 9064 1.313812 ACAGCTACTTCCTCCGTCCG 61.314 60.000 0.00 0.00 0.00 4.79
6627 9065 0.896226 AACAGCTACTTCCTCCGTCC 59.104 55.000 0.00 0.00 0.00 4.79
6628 9066 2.737252 CAAAACAGCTACTTCCTCCGTC 59.263 50.000 0.00 0.00 0.00 4.79
6629 9067 2.550208 CCAAAACAGCTACTTCCTCCGT 60.550 50.000 0.00 0.00 0.00 4.69
6630 9068 2.076863 CCAAAACAGCTACTTCCTCCG 58.923 52.381 0.00 0.00 0.00 4.63
6631 9069 3.075148 GTCCAAAACAGCTACTTCCTCC 58.925 50.000 0.00 0.00 0.00 4.30
6632 9070 3.740115 TGTCCAAAACAGCTACTTCCTC 58.260 45.455 0.00 0.00 32.81 3.71
6633 9071 3.857157 TGTCCAAAACAGCTACTTCCT 57.143 42.857 0.00 0.00 32.81 3.36
6634 9072 4.762251 AGAATGTCCAAAACAGCTACTTCC 59.238 41.667 0.00 0.00 42.37 3.46
6635 9073 5.948992 AGAATGTCCAAAACAGCTACTTC 57.051 39.130 0.00 0.00 42.37 3.01
6636 9074 5.827797 TCAAGAATGTCCAAAACAGCTACTT 59.172 36.000 0.00 0.00 42.37 2.24
6637 9075 5.376625 TCAAGAATGTCCAAAACAGCTACT 58.623 37.500 0.00 0.00 42.37 2.57
6638 9076 5.689383 TCAAGAATGTCCAAAACAGCTAC 57.311 39.130 0.00 0.00 42.37 3.58
6639 9077 6.899393 AATCAAGAATGTCCAAAACAGCTA 57.101 33.333 0.00 0.00 42.37 3.32
6640 9078 5.796424 AATCAAGAATGTCCAAAACAGCT 57.204 34.783 0.00 0.00 42.37 4.24
6641 9079 7.945033 TTAAATCAAGAATGTCCAAAACAGC 57.055 32.000 0.00 0.00 42.37 4.40
6691 9129 4.718940 ACCTTTGGTAGCACAATAATGC 57.281 40.909 0.00 0.00 46.50 3.56
6692 9130 6.823689 AGAGTACCTTTGGTAGCACAATAATG 59.176 38.462 0.00 0.00 39.02 1.90
6693 9131 6.958767 AGAGTACCTTTGGTAGCACAATAAT 58.041 36.000 0.00 0.00 39.02 1.28
6694 9132 6.014070 TGAGAGTACCTTTGGTAGCACAATAA 60.014 38.462 0.00 0.00 39.02 1.40
6695 9133 5.482526 TGAGAGTACCTTTGGTAGCACAATA 59.517 40.000 0.00 0.00 39.02 1.90
6696 9134 4.286032 TGAGAGTACCTTTGGTAGCACAAT 59.714 41.667 0.00 0.00 39.02 2.71
6697 9135 3.644265 TGAGAGTACCTTTGGTAGCACAA 59.356 43.478 0.00 0.00 39.02 3.33
6698 9136 3.236047 TGAGAGTACCTTTGGTAGCACA 58.764 45.455 0.00 0.00 39.02 4.57
6699 9137 3.510360 TCTGAGAGTACCTTTGGTAGCAC 59.490 47.826 0.00 0.00 39.02 4.40
6700 9138 3.774734 TCTGAGAGTACCTTTGGTAGCA 58.225 45.455 0.00 0.00 39.02 3.49
6701 9139 4.803098 TTCTGAGAGTACCTTTGGTAGC 57.197 45.455 0.00 0.00 39.02 3.58
6702 9140 6.159988 CACTTTCTGAGAGTACCTTTGGTAG 58.840 44.000 0.01 0.00 39.02 3.18
6703 9141 5.011738 CCACTTTCTGAGAGTACCTTTGGTA 59.988 44.000 0.01 0.00 37.09 3.25
6704 9142 4.202367 CCACTTTCTGAGAGTACCTTTGGT 60.202 45.833 0.01 0.00 40.16 3.67
6705 9143 4.202367 ACCACTTTCTGAGAGTACCTTTGG 60.202 45.833 0.01 0.31 0.00 3.28
6706 9144 4.752101 CACCACTTTCTGAGAGTACCTTTG 59.248 45.833 0.01 0.00 0.00 2.77
6707 9145 4.202367 CCACCACTTTCTGAGAGTACCTTT 60.202 45.833 0.01 0.00 0.00 3.11
6708 9146 3.325135 CCACCACTTTCTGAGAGTACCTT 59.675 47.826 0.01 0.00 0.00 3.50
6709 9147 2.900546 CCACCACTTTCTGAGAGTACCT 59.099 50.000 0.01 0.00 0.00 3.08
6710 9148 2.633481 ACCACCACTTTCTGAGAGTACC 59.367 50.000 0.01 0.00 0.00 3.34
6711 9149 4.338379 AACCACCACTTTCTGAGAGTAC 57.662 45.455 0.01 0.00 0.00 2.73
6712 9150 5.123227 CAAAACCACCACTTTCTGAGAGTA 58.877 41.667 0.01 0.00 0.00 2.59
6713 9151 3.933861 AAACCACCACTTTCTGAGAGT 57.066 42.857 0.00 0.00 0.00 3.24
6714 9152 3.947834 ACAAAACCACCACTTTCTGAGAG 59.052 43.478 0.00 0.00 0.00 3.20
6715 9153 3.945285 GACAAAACCACCACTTTCTGAGA 59.055 43.478 0.00 0.00 0.00 3.27
6716 9154 3.066760 GGACAAAACCACCACTTTCTGAG 59.933 47.826 0.00 0.00 0.00 3.35
6717 9155 3.020984 GGACAAAACCACCACTTTCTGA 58.979 45.455 0.00 0.00 0.00 3.27
6718 9156 2.757868 TGGACAAAACCACCACTTTCTG 59.242 45.455 0.00 0.00 34.77 3.02
6719 9157 3.094484 TGGACAAAACCACCACTTTCT 57.906 42.857 0.00 0.00 34.77 2.52
6720 9158 3.878160 TTGGACAAAACCACCACTTTC 57.122 42.857 0.00 0.00 39.85 2.62
6721 9159 3.772025 TCATTGGACAAAACCACCACTTT 59.228 39.130 0.00 0.00 39.85 2.66
6722 9160 3.370104 TCATTGGACAAAACCACCACTT 58.630 40.909 0.00 0.00 39.85 3.16
6723 9161 3.025322 TCATTGGACAAAACCACCACT 57.975 42.857 0.00 0.00 39.85 4.00
6724 9162 3.320541 TCATCATTGGACAAAACCACCAC 59.679 43.478 0.00 0.00 39.85 4.16
6725 9163 3.570540 TCATCATTGGACAAAACCACCA 58.429 40.909 0.00 0.00 39.85 4.17
6726 9164 4.675146 CGATCATCATTGGACAAAACCACC 60.675 45.833 0.00 0.00 39.85 4.61
6727 9165 4.155826 TCGATCATCATTGGACAAAACCAC 59.844 41.667 0.00 0.00 39.85 4.16
6728 9166 4.331108 TCGATCATCATTGGACAAAACCA 58.669 39.130 0.00 0.00 38.24 3.67
6729 9167 4.396166 ACTCGATCATCATTGGACAAAACC 59.604 41.667 0.00 0.00 0.00 3.27
6730 9168 5.122239 TGACTCGATCATCATTGGACAAAAC 59.878 40.000 0.00 0.00 29.99 2.43
6731 9169 5.244755 TGACTCGATCATCATTGGACAAAA 58.755 37.500 0.00 0.00 29.99 2.44
6732 9170 4.831107 TGACTCGATCATCATTGGACAAA 58.169 39.130 0.00 0.00 29.99 2.83
6733 9171 4.470334 TGACTCGATCATCATTGGACAA 57.530 40.909 0.00 0.00 29.99 3.18
6734 9172 4.470334 TTGACTCGATCATCATTGGACA 57.530 40.909 0.00 0.00 37.11 4.02
6735 9173 4.872691 AGTTTGACTCGATCATCATTGGAC 59.127 41.667 0.00 0.00 37.11 4.02
6736 9174 5.089970 AGTTTGACTCGATCATCATTGGA 57.910 39.130 0.00 0.00 37.11 3.53
6737 9175 5.808042 AAGTTTGACTCGATCATCATTGG 57.192 39.130 0.00 0.00 37.11 3.16
6738 9176 9.778993 AAATTAAGTTTGACTCGATCATCATTG 57.221 29.630 0.00 0.00 37.11 2.82
6740 9178 9.778993 CAAAATTAAGTTTGACTCGATCATCAT 57.221 29.630 20.74 0.00 40.29 2.45
6741 9179 8.236586 CCAAAATTAAGTTTGACTCGATCATCA 58.763 33.333 25.53 0.00 40.29 3.07
6742 9180 8.450964 TCCAAAATTAAGTTTGACTCGATCATC 58.549 33.333 25.53 0.00 40.29 2.92
6743 9181 8.335532 TCCAAAATTAAGTTTGACTCGATCAT 57.664 30.769 25.53 0.00 40.29 2.45
6744 9182 7.737972 TCCAAAATTAAGTTTGACTCGATCA 57.262 32.000 25.53 1.17 40.29 2.92
6745 9183 8.504005 TCTTCCAAAATTAAGTTTGACTCGATC 58.496 33.333 25.53 0.00 40.29 3.69
6746 9184 8.391075 TCTTCCAAAATTAAGTTTGACTCGAT 57.609 30.769 25.53 0.00 40.29 3.59
6747 9185 7.795482 TCTTCCAAAATTAAGTTTGACTCGA 57.205 32.000 25.53 13.53 40.29 4.04
6748 9186 8.850454 TTTCTTCCAAAATTAAGTTTGACTCG 57.150 30.769 25.53 11.69 40.29 4.18
6762 9200 9.074576 GGGTAGAAGATACTTTTTCTTCCAAAA 57.925 33.333 9.23 0.00 46.71 2.44
6763 9201 8.445588 AGGGTAGAAGATACTTTTTCTTCCAAA 58.554 33.333 9.23 0.00 46.71 3.28
6764 9202 7.985589 AGGGTAGAAGATACTTTTTCTTCCAA 58.014 34.615 9.23 0.00 46.71 3.53
6765 9203 7.458170 AGAGGGTAGAAGATACTTTTTCTTCCA 59.542 37.037 9.23 0.00 46.71 3.53
6766 9204 7.853299 AGAGGGTAGAAGATACTTTTTCTTCC 58.147 38.462 9.23 3.03 46.71 3.46
6767 9205 8.755028 AGAGAGGGTAGAAGATACTTTTTCTTC 58.245 37.037 5.50 5.50 46.15 2.87
6768 9206 8.673456 AGAGAGGGTAGAAGATACTTTTTCTT 57.327 34.615 0.00 0.00 35.42 2.52
6769 9207 8.673456 AAGAGAGGGTAGAAGATACTTTTTCT 57.327 34.615 0.00 0.00 37.42 2.52
6770 9208 9.157104 CAAAGAGAGGGTAGAAGATACTTTTTC 57.843 37.037 0.00 0.00 0.00 2.29
6771 9209 8.661345 ACAAAGAGAGGGTAGAAGATACTTTTT 58.339 33.333 0.00 0.00 0.00 1.94
6772 9210 8.208575 ACAAAGAGAGGGTAGAAGATACTTTT 57.791 34.615 0.00 0.00 0.00 2.27
6773 9211 7.800300 ACAAAGAGAGGGTAGAAGATACTTT 57.200 36.000 0.00 0.00 0.00 2.66
6774 9212 7.800300 AACAAAGAGAGGGTAGAAGATACTT 57.200 36.000 0.00 0.00 0.00 2.24
6775 9213 7.800300 AAACAAAGAGAGGGTAGAAGATACT 57.200 36.000 0.00 0.00 0.00 2.12
6778 9216 8.826765 TCAATAAACAAAGAGAGGGTAGAAGAT 58.173 33.333 0.00 0.00 0.00 2.40
6779 9217 8.202461 TCAATAAACAAAGAGAGGGTAGAAGA 57.798 34.615 0.00 0.00 0.00 2.87
6780 9218 8.722394 GTTCAATAAACAAAGAGAGGGTAGAAG 58.278 37.037 0.00 0.00 37.82 2.85
6781 9219 8.437575 AGTTCAATAAACAAAGAGAGGGTAGAA 58.562 33.333 0.00 0.00 40.56 2.10
6782 9220 7.974504 AGTTCAATAAACAAAGAGAGGGTAGA 58.025 34.615 0.00 0.00 40.56 2.59
6783 9221 8.622948 AAGTTCAATAAACAAAGAGAGGGTAG 57.377 34.615 0.00 0.00 40.56 3.18
6784 9222 8.990163 AAAGTTCAATAAACAAAGAGAGGGTA 57.010 30.769 0.00 0.00 40.56 3.69
6785 9223 7.898014 AAAGTTCAATAAACAAAGAGAGGGT 57.102 32.000 0.00 0.00 40.56 4.34
6799 9237 9.716556 AGAGAGGGTAGAAGATAAAGTTCAATA 57.283 33.333 0.00 0.00 0.00 1.90
6800 9238 8.616799 AGAGAGGGTAGAAGATAAAGTTCAAT 57.383 34.615 0.00 0.00 0.00 2.57
6801 9239 8.437274 AAGAGAGGGTAGAAGATAAAGTTCAA 57.563 34.615 0.00 0.00 0.00 2.69
6802 9240 9.191479 CTAAGAGAGGGTAGAAGATAAAGTTCA 57.809 37.037 0.00 0.00 0.00 3.18
6803 9241 9.192642 ACTAAGAGAGGGTAGAAGATAAAGTTC 57.807 37.037 0.00 0.00 0.00 3.01
6804 9242 9.192642 GACTAAGAGAGGGTAGAAGATAAAGTT 57.807 37.037 0.00 0.00 0.00 2.66
6805 9243 8.562635 AGACTAAGAGAGGGTAGAAGATAAAGT 58.437 37.037 0.00 0.00 0.00 2.66
6806 9244 8.990163 AGACTAAGAGAGGGTAGAAGATAAAG 57.010 38.462 0.00 0.00 0.00 1.85
6807 9245 8.783903 AGAGACTAAGAGAGGGTAGAAGATAAA 58.216 37.037 0.00 0.00 0.00 1.40
6808 9246 8.339720 AGAGACTAAGAGAGGGTAGAAGATAA 57.660 38.462 0.00 0.00 0.00 1.75
6809 9247 7.016858 GGAGAGACTAAGAGAGGGTAGAAGATA 59.983 44.444 0.00 0.00 0.00 1.98
6810 9248 6.183361 GGAGAGACTAAGAGAGGGTAGAAGAT 60.183 46.154 0.00 0.00 0.00 2.40
6811 9249 5.131475 GGAGAGACTAAGAGAGGGTAGAAGA 59.869 48.000 0.00 0.00 0.00 2.87
6812 9250 5.132144 AGGAGAGACTAAGAGAGGGTAGAAG 59.868 48.000 0.00 0.00 0.00 2.85
6813 9251 5.041015 AGGAGAGACTAAGAGAGGGTAGAA 58.959 45.833 0.00 0.00 0.00 2.10
6814 9252 4.637600 AGGAGAGACTAAGAGAGGGTAGA 58.362 47.826 0.00 0.00 0.00 2.59
6815 9253 5.382664 AAGGAGAGACTAAGAGAGGGTAG 57.617 47.826 0.00 0.00 0.00 3.18
6816 9254 5.511363 CAAAGGAGAGACTAAGAGAGGGTA 58.489 45.833 0.00 0.00 0.00 3.69
6817 9255 4.349365 CAAAGGAGAGACTAAGAGAGGGT 58.651 47.826 0.00 0.00 0.00 4.34
6818 9256 3.132111 GCAAAGGAGAGACTAAGAGAGGG 59.868 52.174 0.00 0.00 0.00 4.30
6819 9257 3.132111 GGCAAAGGAGAGACTAAGAGAGG 59.868 52.174 0.00 0.00 0.00 3.69
6820 9258 3.766591 TGGCAAAGGAGAGACTAAGAGAG 59.233 47.826 0.00 0.00 0.00 3.20
6821 9259 3.779444 TGGCAAAGGAGAGACTAAGAGA 58.221 45.455 0.00 0.00 0.00 3.10
6822 9260 4.249661 GTTGGCAAAGGAGAGACTAAGAG 58.750 47.826 0.00 0.00 0.00 2.85
6823 9261 3.646162 TGTTGGCAAAGGAGAGACTAAGA 59.354 43.478 0.00 0.00 0.00 2.10
6824 9262 4.008074 TGTTGGCAAAGGAGAGACTAAG 57.992 45.455 0.00 0.00 0.00 2.18
6825 9263 4.431416 TTGTTGGCAAAGGAGAGACTAA 57.569 40.909 0.00 0.00 0.00 2.24
6826 9264 4.287067 AGATTGTTGGCAAAGGAGAGACTA 59.713 41.667 0.00 0.00 38.21 2.59
6827 9265 3.073650 AGATTGTTGGCAAAGGAGAGACT 59.926 43.478 0.00 0.00 38.21 3.24
6828 9266 3.416156 AGATTGTTGGCAAAGGAGAGAC 58.584 45.455 0.00 0.00 38.21 3.36
6829 9267 3.679389 GAGATTGTTGGCAAAGGAGAGA 58.321 45.455 0.00 0.00 38.21 3.10
6830 9268 2.417933 CGAGATTGTTGGCAAAGGAGAG 59.582 50.000 0.00 0.00 38.21 3.20
6831 9269 2.426522 CGAGATTGTTGGCAAAGGAGA 58.573 47.619 0.00 0.00 38.21 3.71
6832 9270 1.470098 CCGAGATTGTTGGCAAAGGAG 59.530 52.381 0.00 0.00 38.21 3.69
6833 9271 1.533625 CCGAGATTGTTGGCAAAGGA 58.466 50.000 0.00 0.00 38.21 3.36
6840 9278 4.058817 GGTAGATAAGCCGAGATTGTTGG 58.941 47.826 0.00 0.00 0.00 3.77
6841 9279 4.058817 GGGTAGATAAGCCGAGATTGTTG 58.941 47.826 0.00 0.00 35.65 3.33
6842 9280 4.338379 GGGTAGATAAGCCGAGATTGTT 57.662 45.455 0.00 0.00 35.65 2.83
6851 9289 1.761822 GGGGCAGGGTAGATAAGCC 59.238 63.158 0.00 0.00 46.88 4.35
6852 9290 0.768609 AGGGGGCAGGGTAGATAAGC 60.769 60.000 0.00 0.00 0.00 3.09
6853 9291 1.353091 GAGGGGGCAGGGTAGATAAG 58.647 60.000 0.00 0.00 0.00 1.73
6854 9292 0.104620 GGAGGGGGCAGGGTAGATAA 60.105 60.000 0.00 0.00 0.00 1.75
6855 9293 1.552393 GGAGGGGGCAGGGTAGATA 59.448 63.158 0.00 0.00 0.00 1.98
6856 9294 2.290745 GGAGGGGGCAGGGTAGAT 59.709 66.667 0.00 0.00 0.00 1.98
6857 9295 4.103928 GGGAGGGGGCAGGGTAGA 62.104 72.222 0.00 0.00 0.00 2.59
6858 9296 4.109656 AGGGAGGGGGCAGGGTAG 62.110 72.222 0.00 0.00 0.00 3.18
6859 9297 4.103928 GAGGGAGGGGGCAGGGTA 62.104 72.222 0.00 0.00 0.00 3.69
6879 9317 4.135153 CAGAGGAGGGTGACGCGG 62.135 72.222 12.47 0.00 0.00 6.46
6880 9318 3.062466 TCAGAGGAGGGTGACGCG 61.062 66.667 3.53 3.53 0.00 6.01
6881 9319 2.574399 GTCAGAGGAGGGTGACGC 59.426 66.667 0.00 0.00 34.16 5.19
6883 9321 0.894184 TGTCGTCAGAGGAGGGTGAC 60.894 60.000 0.00 0.00 39.83 3.67
6884 9322 0.894184 GTGTCGTCAGAGGAGGGTGA 60.894 60.000 0.00 0.00 0.00 4.02
6885 9323 1.587054 GTGTCGTCAGAGGAGGGTG 59.413 63.158 0.00 0.00 0.00 4.61
6886 9324 1.606889 GGTGTCGTCAGAGGAGGGT 60.607 63.158 0.00 0.00 0.00 4.34
6887 9325 2.352032 GGGTGTCGTCAGAGGAGGG 61.352 68.421 0.00 0.00 0.00 4.30
6888 9326 2.352032 GGGGTGTCGTCAGAGGAGG 61.352 68.421 0.00 0.00 0.00 4.30
6889 9327 1.185618 TTGGGGTGTCGTCAGAGGAG 61.186 60.000 0.00 0.00 0.00 3.69
6890 9328 1.152419 TTGGGGTGTCGTCAGAGGA 60.152 57.895 0.00 0.00 0.00 3.71
6891 9329 1.185618 TCTTGGGGTGTCGTCAGAGG 61.186 60.000 0.00 0.00 0.00 3.69
6892 9330 0.038159 GTCTTGGGGTGTCGTCAGAG 60.038 60.000 0.00 0.00 0.00 3.35
6893 9331 0.757561 TGTCTTGGGGTGTCGTCAGA 60.758 55.000 0.00 0.00 0.00 3.27
6894 9332 0.600255 GTGTCTTGGGGTGTCGTCAG 60.600 60.000 0.00 0.00 0.00 3.51
6895 9333 1.331399 TGTGTCTTGGGGTGTCGTCA 61.331 55.000 0.00 0.00 0.00 4.35
6896 9334 0.878961 GTGTGTCTTGGGGTGTCGTC 60.879 60.000 0.00 0.00 0.00 4.20
6897 9335 1.145377 GTGTGTCTTGGGGTGTCGT 59.855 57.895 0.00 0.00 0.00 4.34
6898 9336 1.597027 GGTGTGTCTTGGGGTGTCG 60.597 63.158 0.00 0.00 0.00 4.35
6899 9337 1.597027 CGGTGTGTCTTGGGGTGTC 60.597 63.158 0.00 0.00 0.00 3.67
6902 9340 4.265056 GGCGGTGTGTCTTGGGGT 62.265 66.667 0.00 0.00 0.00 4.95
6952 9390 4.025401 CGCCGCCAGACCAACAAC 62.025 66.667 0.00 0.00 0.00 3.32
7033 9474 2.252346 GCGACCGAGGATAGCGAGA 61.252 63.158 0.00 0.00 0.00 4.04
7039 9480 1.452953 ATTCGCTGCGACCGAGGATA 61.453 55.000 25.94 7.83 34.89 2.59
7052 9493 2.040884 TAGGGAGGGGCATTCGCT 60.041 61.111 10.88 10.88 41.69 4.93
7068 9509 1.987855 CAGAAGGGGGAGGCGTGTA 60.988 63.158 0.00 0.00 0.00 2.90
7264 9724 2.427245 CAACCGCGTACACGTCGA 60.427 61.111 4.92 0.00 42.22 4.20
7308 9768 2.290367 CGGAACATCACAAGCAAAGACA 59.710 45.455 0.00 0.00 0.00 3.41
7436 9896 3.057946 CGTCATGATCTCGATTAGCCAGA 60.058 47.826 0.00 0.00 0.00 3.86
7443 9903 3.491619 CCTTGACCGTCATGATCTCGATT 60.492 47.826 14.43 0.00 0.00 3.34
7453 9913 2.047274 CGTGGCCTTGACCGTCAT 60.047 61.111 3.32 0.00 0.00 3.06
7454 9914 3.228017 TCGTGGCCTTGACCGTCA 61.228 61.111 3.32 0.00 0.00 4.35
7474 9934 0.737715 GAAAGCACGCAGATCCGAGT 60.738 55.000 0.00 0.00 0.00 4.18
7570 11250 2.038837 GGGGCTTTGAGGCGTACAC 61.039 63.158 0.00 0.00 42.43 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.