Multiple sequence alignment - TraesCS5A01G167700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G167700 chr5A 100.000 3139 0 0 1 3139 356595569 356592431 0.000000e+00 5797
1 TraesCS5A01G167700 chr5A 87.937 315 33 3 2828 3139 626078650 626078962 1.780000e-97 366
2 TraesCS5A01G167700 chr5A 87.342 316 36 3 2825 3139 244753200 244752888 2.980000e-95 359
3 TraesCS5A01G167700 chr5B 91.667 2292 105 35 555 2782 304655928 304653659 0.000000e+00 3096
4 TraesCS5A01G167700 chr5D 90.169 1831 97 34 403 2170 268935080 268933270 0.000000e+00 2307
5 TraesCS5A01G167700 chr5D 91.561 474 29 7 2358 2829 268928987 268929451 0.000000e+00 643
6 TraesCS5A01G167700 chr5D 95.385 65 3 0 2188 2252 268933200 268933136 1.540000e-18 104
7 TraesCS5A01G167700 chr5D 98.276 58 0 1 2305 2362 268927885 268927941 1.990000e-17 100
8 TraesCS5A01G167700 chr3D 84.043 1291 156 31 883 2138 319864966 319866241 0.000000e+00 1197
9 TraesCS5A01G167700 chr3A 85.338 1139 124 23 1040 2144 405958709 405957580 0.000000e+00 1138
10 TraesCS5A01G167700 chr2B 82.034 1347 150 49 853 2137 632513590 632512274 0.000000e+00 1062
11 TraesCS5A01G167700 chr2A 83.863 1165 130 27 1001 2137 677368550 677367416 0.000000e+00 1057
12 TraesCS5A01G167700 chr2A 83.930 1145 133 24 1012 2137 677069439 677068327 0.000000e+00 1048
13 TraesCS5A01G167700 chr2A 83.930 1145 133 24 1012 2137 677101380 677100268 0.000000e+00 1048
14 TraesCS5A01G167700 chr2A 83.930 1145 133 24 1012 2137 677157451 677156339 0.000000e+00 1048
15 TraesCS5A01G167700 chr2A 83.930 1145 133 24 1012 2137 677172654 677171542 0.000000e+00 1048
16 TraesCS5A01G167700 chr2A 83.194 1077 133 30 1088 2137 30567704 30568759 0.000000e+00 942
17 TraesCS5A01G167700 chr2A 88.686 601 63 4 1538 2137 677038870 677038274 0.000000e+00 728
18 TraesCS5A01G167700 chr2A 79.012 648 85 31 853 1473 677039571 677038948 2.270000e-106 396
19 TraesCS5A01G167700 chrUn 81.770 1322 180 36 853 2137 183931380 183932677 0.000000e+00 1050
20 TraesCS5A01G167700 chrUn 81.708 1323 179 39 853 2137 25995545 25994248 0.000000e+00 1044
21 TraesCS5A01G167700 chrUn 81.722 1324 177 40 853 2137 255747004 255748301 0.000000e+00 1044
22 TraesCS5A01G167700 chrUn 81.633 1323 180 39 853 2137 253003294 253001997 0.000000e+00 1038
23 TraesCS5A01G167700 chrUn 81.633 1323 180 39 853 2137 318906610 318907907 0.000000e+00 1038
24 TraesCS5A01G167700 chr2D 83.503 1079 129 29 1088 2134 28762986 28764047 0.000000e+00 961
25 TraesCS5A01G167700 chr3B 87.560 828 76 13 1341 2144 400289139 400288315 0.000000e+00 933
26 TraesCS5A01G167700 chr4D 88.498 313 35 1 2828 3139 474564392 474564080 8.220000e-101 377
27 TraesCS5A01G167700 chr7B 88.462 312 32 3 2829 3139 373117558 373117250 1.060000e-99 374
28 TraesCS5A01G167700 chr7B 87.220 313 36 4 2829 3139 613825943 613826253 1.380000e-93 353
29 TraesCS5A01G167700 chr7B 87.179 312 38 2 2829 3139 613893629 613893939 1.380000e-93 353
30 TraesCS5A01G167700 chr7B 87.179 312 38 2 2829 3139 613917357 613917667 1.380000e-93 353
31 TraesCS5A01G167700 chr1B 87.658 316 33 4 2828 3139 301749928 301749615 2.300000e-96 363
32 TraesCS5A01G167700 chr6D 85.843 332 40 5 2810 3139 91034016 91034342 2.320000e-91 346


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G167700 chr5A 356592431 356595569 3138 True 5797.0 5797 100.0000 1 3139 1 chr5A.!!$R2 3138
1 TraesCS5A01G167700 chr5B 304653659 304655928 2269 True 3096.0 3096 91.6670 555 2782 1 chr5B.!!$R1 2227
2 TraesCS5A01G167700 chr5D 268933136 268935080 1944 True 1205.5 2307 92.7770 403 2252 2 chr5D.!!$R1 1849
3 TraesCS5A01G167700 chr5D 268927885 268929451 1566 False 371.5 643 94.9185 2305 2829 2 chr5D.!!$F1 524
4 TraesCS5A01G167700 chr3D 319864966 319866241 1275 False 1197.0 1197 84.0430 883 2138 1 chr3D.!!$F1 1255
5 TraesCS5A01G167700 chr3A 405957580 405958709 1129 True 1138.0 1138 85.3380 1040 2144 1 chr3A.!!$R1 1104
6 TraesCS5A01G167700 chr2B 632512274 632513590 1316 True 1062.0 1062 82.0340 853 2137 1 chr2B.!!$R1 1284
7 TraesCS5A01G167700 chr2A 677367416 677368550 1134 True 1057.0 1057 83.8630 1001 2137 1 chr2A.!!$R5 1136
8 TraesCS5A01G167700 chr2A 677068327 677069439 1112 True 1048.0 1048 83.9300 1012 2137 1 chr2A.!!$R1 1125
9 TraesCS5A01G167700 chr2A 677100268 677101380 1112 True 1048.0 1048 83.9300 1012 2137 1 chr2A.!!$R2 1125
10 TraesCS5A01G167700 chr2A 677156339 677157451 1112 True 1048.0 1048 83.9300 1012 2137 1 chr2A.!!$R3 1125
11 TraesCS5A01G167700 chr2A 677171542 677172654 1112 True 1048.0 1048 83.9300 1012 2137 1 chr2A.!!$R4 1125
12 TraesCS5A01G167700 chr2A 30567704 30568759 1055 False 942.0 942 83.1940 1088 2137 1 chr2A.!!$F1 1049
13 TraesCS5A01G167700 chr2A 677038274 677039571 1297 True 562.0 728 83.8490 853 2137 2 chr2A.!!$R6 1284
14 TraesCS5A01G167700 chrUn 183931380 183932677 1297 False 1050.0 1050 81.7700 853 2137 1 chrUn.!!$F1 1284
15 TraesCS5A01G167700 chrUn 25994248 25995545 1297 True 1044.0 1044 81.7080 853 2137 1 chrUn.!!$R1 1284
16 TraesCS5A01G167700 chrUn 255747004 255748301 1297 False 1044.0 1044 81.7220 853 2137 1 chrUn.!!$F2 1284
17 TraesCS5A01G167700 chrUn 253001997 253003294 1297 True 1038.0 1038 81.6330 853 2137 1 chrUn.!!$R2 1284
18 TraesCS5A01G167700 chrUn 318906610 318907907 1297 False 1038.0 1038 81.6330 853 2137 1 chrUn.!!$F3 1284
19 TraesCS5A01G167700 chr2D 28762986 28764047 1061 False 961.0 961 83.5030 1088 2134 1 chr2D.!!$F1 1046
20 TraesCS5A01G167700 chr3B 400288315 400289139 824 True 933.0 933 87.5600 1341 2144 1 chr3B.!!$R1 803

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
61 62 0.179134 GGTGCTAGGTCGTGCTACTG 60.179 60.0 0.00 0.0 0.00 2.74 F
217 218 0.390340 AGCGCACATGACTACTGTGG 60.390 55.0 11.47 0.0 43.34 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1478 1623 1.189446 CGAACTTCGGCGTATGTATGC 59.811 52.381 6.85 0.0 36.00 3.14 R
2185 2442 2.280835 CAGGCCAGACTGCTACTGA 58.719 57.895 5.01 0.0 37.54 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.093717 ACCTGACGACTGTTACTGTTG 57.906 47.619 7.88 7.88 0.00 3.33
22 23 1.792949 CCTGACGACTGTTACTGTTGC 59.207 52.381 9.15 4.08 0.00 4.17
23 24 2.545952 CCTGACGACTGTTACTGTTGCT 60.546 50.000 9.15 0.00 0.00 3.91
24 25 3.305131 CCTGACGACTGTTACTGTTGCTA 60.305 47.826 9.15 0.00 0.00 3.49
25 26 4.486090 CTGACGACTGTTACTGTTGCTAT 58.514 43.478 9.15 0.00 0.00 2.97
26 27 4.482386 TGACGACTGTTACTGTTGCTATC 58.518 43.478 9.15 1.85 0.00 2.08
27 28 3.846360 ACGACTGTTACTGTTGCTATCC 58.154 45.455 9.15 0.00 0.00 2.59
28 29 3.510360 ACGACTGTTACTGTTGCTATCCT 59.490 43.478 9.15 0.00 0.00 3.24
29 30 4.703575 ACGACTGTTACTGTTGCTATCCTA 59.296 41.667 9.15 0.00 0.00 2.94
30 31 5.035443 CGACTGTTACTGTTGCTATCCTAC 58.965 45.833 0.00 0.00 0.00 3.18
31 32 5.163642 CGACTGTTACTGTTGCTATCCTACT 60.164 44.000 0.00 0.00 0.00 2.57
32 33 6.037940 CGACTGTTACTGTTGCTATCCTACTA 59.962 42.308 0.00 0.00 0.00 1.82
33 34 7.255173 CGACTGTTACTGTTGCTATCCTACTAT 60.255 40.741 0.00 0.00 0.00 2.12
34 35 8.991783 ACTGTTACTGTTGCTATCCTACTATA 57.008 34.615 0.00 0.00 0.00 1.31
35 36 9.589461 ACTGTTACTGTTGCTATCCTACTATAT 57.411 33.333 0.00 0.00 0.00 0.86
51 52 8.191534 CCTACTATATTTTGTAGGTGCTAGGT 57.808 38.462 13.16 0.00 46.40 3.08
52 53 8.305317 CCTACTATATTTTGTAGGTGCTAGGTC 58.695 40.741 13.16 0.00 46.40 3.85
53 54 6.746120 ACTATATTTTGTAGGTGCTAGGTCG 58.254 40.000 0.00 0.00 0.00 4.79
54 55 3.975168 ATTTTGTAGGTGCTAGGTCGT 57.025 42.857 0.00 0.00 0.00 4.34
55 56 2.736144 TTTGTAGGTGCTAGGTCGTG 57.264 50.000 0.00 0.00 0.00 4.35
56 57 0.245539 TTGTAGGTGCTAGGTCGTGC 59.754 55.000 0.00 0.00 0.00 5.34
57 58 0.611062 TGTAGGTGCTAGGTCGTGCT 60.611 55.000 0.00 0.00 0.00 4.40
58 59 1.340308 TGTAGGTGCTAGGTCGTGCTA 60.340 52.381 0.00 0.00 0.00 3.49
59 60 1.065251 GTAGGTGCTAGGTCGTGCTAC 59.935 57.143 0.00 0.00 0.00 3.58
60 61 0.323542 AGGTGCTAGGTCGTGCTACT 60.324 55.000 0.00 0.00 0.00 2.57
61 62 0.179134 GGTGCTAGGTCGTGCTACTG 60.179 60.000 0.00 0.00 0.00 2.74
62 63 0.802607 GTGCTAGGTCGTGCTACTGC 60.803 60.000 0.00 0.00 40.20 4.40
78 79 6.400579 GCTACTGCAATGCTGTATGTATAG 57.599 41.667 21.96 13.77 40.89 1.31
79 80 5.163913 GCTACTGCAATGCTGTATGTATAGC 60.164 44.000 21.96 18.64 40.89 2.97
80 81 4.965814 ACTGCAATGCTGTATGTATAGCT 58.034 39.130 16.03 0.00 40.55 3.32
81 82 4.753610 ACTGCAATGCTGTATGTATAGCTG 59.246 41.667 16.03 2.99 40.55 4.24
82 83 4.707105 TGCAATGCTGTATGTATAGCTGT 58.293 39.130 6.82 0.00 40.55 4.40
83 84 4.512571 TGCAATGCTGTATGTATAGCTGTG 59.487 41.667 6.82 8.40 40.55 3.66
84 85 4.083643 GCAATGCTGTATGTATAGCTGTGG 60.084 45.833 0.00 0.00 40.55 4.17
85 86 3.751479 TGCTGTATGTATAGCTGTGGG 57.249 47.619 9.65 0.00 40.55 4.61
86 87 3.038280 TGCTGTATGTATAGCTGTGGGT 58.962 45.455 9.65 0.00 40.55 4.51
87 88 4.219919 TGCTGTATGTATAGCTGTGGGTA 58.780 43.478 9.65 0.00 40.55 3.69
88 89 4.838423 TGCTGTATGTATAGCTGTGGGTAT 59.162 41.667 9.65 0.00 40.55 2.73
89 90 6.014012 TGCTGTATGTATAGCTGTGGGTATA 58.986 40.000 9.65 0.00 40.55 1.47
90 91 6.495526 TGCTGTATGTATAGCTGTGGGTATAA 59.504 38.462 9.65 0.00 40.55 0.98
91 92 7.036220 GCTGTATGTATAGCTGTGGGTATAAG 58.964 42.308 0.00 0.00 39.24 1.73
92 93 7.309867 GCTGTATGTATAGCTGTGGGTATAAGT 60.310 40.741 0.00 0.00 39.24 2.24
93 94 7.892609 TGTATGTATAGCTGTGGGTATAAGTG 58.107 38.462 0.00 0.00 39.24 3.16
94 95 6.996180 ATGTATAGCTGTGGGTATAAGTGT 57.004 37.500 0.00 0.00 39.24 3.55
95 96 9.017509 GTATGTATAGCTGTGGGTATAAGTGTA 57.982 37.037 0.00 0.00 39.24 2.90
96 97 7.520451 TGTATAGCTGTGGGTATAAGTGTAG 57.480 40.000 0.00 0.00 39.24 2.74
97 98 7.292319 TGTATAGCTGTGGGTATAAGTGTAGA 58.708 38.462 0.00 0.00 39.24 2.59
98 99 7.948447 TGTATAGCTGTGGGTATAAGTGTAGAT 59.052 37.037 0.00 0.00 39.24 1.98
99 100 5.537300 AGCTGTGGGTATAAGTGTAGATG 57.463 43.478 0.00 0.00 0.00 2.90
100 101 4.962995 AGCTGTGGGTATAAGTGTAGATGT 59.037 41.667 0.00 0.00 0.00 3.06
101 102 5.425539 AGCTGTGGGTATAAGTGTAGATGTT 59.574 40.000 0.00 0.00 0.00 2.71
102 103 6.070194 AGCTGTGGGTATAAGTGTAGATGTTT 60.070 38.462 0.00 0.00 0.00 2.83
103 104 6.598064 GCTGTGGGTATAAGTGTAGATGTTTT 59.402 38.462 0.00 0.00 0.00 2.43
104 105 7.120726 GCTGTGGGTATAAGTGTAGATGTTTTT 59.879 37.037 0.00 0.00 0.00 1.94
105 106 9.661563 CTGTGGGTATAAGTGTAGATGTTTTTA 57.338 33.333 0.00 0.00 0.00 1.52
130 131 8.737168 ATGTATAAGCAATTGTATGACTGTGT 57.263 30.769 7.40 0.00 0.00 3.72
131 132 8.560355 TGTATAAGCAATTGTATGACTGTGTT 57.440 30.769 7.40 0.00 0.00 3.32
132 133 9.660180 TGTATAAGCAATTGTATGACTGTGTTA 57.340 29.630 7.40 0.00 0.00 2.41
137 138 9.762933 AAGCAATTGTATGACTGTGTTAAAATT 57.237 25.926 7.40 0.00 0.00 1.82
138 139 9.410556 AGCAATTGTATGACTGTGTTAAAATTC 57.589 29.630 7.40 0.00 0.00 2.17
139 140 9.410556 GCAATTGTATGACTGTGTTAAAATTCT 57.589 29.630 7.40 0.00 0.00 2.40
148 149 8.868916 TGACTGTGTTAAAATTCTTCAAAAAGC 58.131 29.630 0.00 0.00 32.18 3.51
149 150 9.087424 GACTGTGTTAAAATTCTTCAAAAAGCT 57.913 29.630 0.00 0.00 32.18 3.74
150 151 9.087424 ACTGTGTTAAAATTCTTCAAAAAGCTC 57.913 29.630 0.00 0.00 32.18 4.09
151 152 8.994429 TGTGTTAAAATTCTTCAAAAAGCTCA 57.006 26.923 0.00 0.00 32.18 4.26
152 153 9.429359 TGTGTTAAAATTCTTCAAAAAGCTCAA 57.571 25.926 0.00 0.00 32.18 3.02
165 166 8.984891 TCAAAAAGCTCAATTTATGTATGTGG 57.015 30.769 0.00 0.00 0.00 4.17
166 167 8.801299 TCAAAAAGCTCAATTTATGTATGTGGA 58.199 29.630 0.00 0.00 0.00 4.02
167 168 9.079833 CAAAAAGCTCAATTTATGTATGTGGAG 57.920 33.333 0.00 0.00 0.00 3.86
168 169 8.579850 AAAAGCTCAATTTATGTATGTGGAGA 57.420 30.769 0.00 0.00 0.00 3.71
169 170 8.757982 AAAGCTCAATTTATGTATGTGGAGAT 57.242 30.769 0.00 0.00 0.00 2.75
170 171 7.741027 AGCTCAATTTATGTATGTGGAGATG 57.259 36.000 0.00 0.00 0.00 2.90
171 172 7.512130 AGCTCAATTTATGTATGTGGAGATGA 58.488 34.615 0.00 0.00 0.00 2.92
172 173 7.443575 AGCTCAATTTATGTATGTGGAGATGAC 59.556 37.037 0.00 0.00 0.00 3.06
173 174 7.227314 GCTCAATTTATGTATGTGGAGATGACA 59.773 37.037 0.00 0.00 0.00 3.58
174 175 9.112725 CTCAATTTATGTATGTGGAGATGACAA 57.887 33.333 0.00 0.00 0.00 3.18
175 176 9.460019 TCAATTTATGTATGTGGAGATGACAAA 57.540 29.630 0.00 0.00 0.00 2.83
176 177 9.507280 CAATTTATGTATGTGGAGATGACAAAC 57.493 33.333 0.00 0.00 0.00 2.93
177 178 7.624360 TTTATGTATGTGGAGATGACAAACC 57.376 36.000 0.00 0.00 0.00 3.27
178 179 4.632327 TGTATGTGGAGATGACAAACCA 57.368 40.909 0.00 0.00 0.00 3.67
179 180 5.178096 TGTATGTGGAGATGACAAACCAT 57.822 39.130 0.00 0.00 34.87 3.55
180 181 4.943093 TGTATGTGGAGATGACAAACCATG 59.057 41.667 0.00 0.00 34.87 3.66
182 183 3.148412 TGTGGAGATGACAAACCATGTG 58.852 45.455 0.00 0.00 44.12 3.21
183 184 2.095059 GTGGAGATGACAAACCATGTGC 60.095 50.000 0.00 0.00 44.12 4.57
184 185 2.161855 GGAGATGACAAACCATGTGCA 58.838 47.619 0.00 0.00 44.12 4.57
185 186 2.756760 GGAGATGACAAACCATGTGCAT 59.243 45.455 0.00 0.00 44.12 3.96
186 187 3.947196 GGAGATGACAAACCATGTGCATA 59.053 43.478 0.00 0.00 44.12 3.14
187 188 4.398988 GGAGATGACAAACCATGTGCATAA 59.601 41.667 0.00 0.00 44.12 1.90
188 189 5.068198 GGAGATGACAAACCATGTGCATAAT 59.932 40.000 0.00 0.00 44.12 1.28
189 190 6.140303 AGATGACAAACCATGTGCATAATC 57.860 37.500 0.00 0.00 44.12 1.75
190 191 5.653330 AGATGACAAACCATGTGCATAATCA 59.347 36.000 0.00 0.00 44.12 2.57
191 192 5.313520 TGACAAACCATGTGCATAATCAG 57.686 39.130 0.00 0.00 44.12 2.90
192 193 5.008980 TGACAAACCATGTGCATAATCAGA 58.991 37.500 0.00 0.00 44.12 3.27
193 194 5.476254 TGACAAACCATGTGCATAATCAGAA 59.524 36.000 0.00 0.00 44.12 3.02
194 195 6.153170 TGACAAACCATGTGCATAATCAGAAT 59.847 34.615 0.00 0.00 44.12 2.40
195 196 6.334989 ACAAACCATGTGCATAATCAGAATG 58.665 36.000 0.00 0.00 41.93 2.67
196 197 6.153170 ACAAACCATGTGCATAATCAGAATGA 59.847 34.615 0.00 0.00 46.65 2.57
197 198 7.629866 ACAAACCATGTGCATAATCAGAATGAG 60.630 37.037 0.00 0.00 46.03 2.90
207 208 1.648504 TCAGAATGAGAGCGCACATG 58.351 50.000 11.47 2.79 42.56 3.21
208 209 1.205417 TCAGAATGAGAGCGCACATGA 59.795 47.619 11.47 5.16 42.56 3.07
209 210 1.326852 CAGAATGAGAGCGCACATGAC 59.673 52.381 11.47 10.10 39.69 3.06
210 211 1.206610 AGAATGAGAGCGCACATGACT 59.793 47.619 11.47 11.98 0.00 3.41
211 212 2.428530 AGAATGAGAGCGCACATGACTA 59.571 45.455 11.47 0.00 0.00 2.59
212 213 2.215907 ATGAGAGCGCACATGACTAC 57.784 50.000 11.47 0.00 0.00 2.73
213 214 1.177401 TGAGAGCGCACATGACTACT 58.823 50.000 11.47 0.00 0.00 2.57
214 215 1.135286 TGAGAGCGCACATGACTACTG 60.135 52.381 11.47 0.00 0.00 2.74
215 216 0.891373 AGAGCGCACATGACTACTGT 59.109 50.000 11.47 0.00 0.00 3.55
216 217 0.994995 GAGCGCACATGACTACTGTG 59.005 55.000 11.47 0.00 45.39 3.66
217 218 0.390340 AGCGCACATGACTACTGTGG 60.390 55.000 11.47 0.00 43.34 4.17
218 219 1.970917 GCGCACATGACTACTGTGGC 61.971 60.000 0.30 4.01 43.34 5.01
219 220 1.686566 CGCACATGACTACTGTGGCG 61.687 60.000 0.00 0.00 43.34 5.69
220 221 1.970917 GCACATGACTACTGTGGCGC 61.971 60.000 0.00 0.00 43.34 6.53
221 222 1.079127 ACATGACTACTGTGGCGCC 60.079 57.895 22.73 22.73 0.00 6.53
222 223 1.079197 CATGACTACTGTGGCGCCA 60.079 57.895 29.03 29.03 0.00 5.69
223 224 1.079127 ATGACTACTGTGGCGCCAC 60.079 57.895 45.20 45.20 46.33 5.01
224 225 2.434359 GACTACTGTGGCGCCACC 60.434 66.667 46.85 32.41 45.63 4.61
247 248 3.467226 GCGCCCCAGCCACTAGTA 61.467 66.667 0.00 0.00 34.57 1.82
248 249 3.026431 GCGCCCCAGCCACTAGTAA 62.026 63.158 0.00 0.00 34.57 2.24
249 250 1.830145 CGCCCCAGCCACTAGTAAT 59.170 57.895 0.00 0.00 34.57 1.89
250 251 0.532862 CGCCCCAGCCACTAGTAATG 60.533 60.000 0.00 0.00 34.57 1.90
251 252 0.837272 GCCCCAGCCACTAGTAATGA 59.163 55.000 0.00 0.00 0.00 2.57
252 253 1.421646 GCCCCAGCCACTAGTAATGAT 59.578 52.381 0.00 0.00 0.00 2.45
253 254 2.637872 GCCCCAGCCACTAGTAATGATA 59.362 50.000 0.00 0.00 0.00 2.15
254 255 3.557264 GCCCCAGCCACTAGTAATGATAC 60.557 52.174 0.00 0.00 0.00 2.24
255 256 3.646162 CCCCAGCCACTAGTAATGATACA 59.354 47.826 0.00 0.00 34.29 2.29
256 257 4.102524 CCCCAGCCACTAGTAATGATACAA 59.897 45.833 0.00 0.00 34.29 2.41
257 258 5.397447 CCCCAGCCACTAGTAATGATACAAA 60.397 44.000 0.00 0.00 34.29 2.83
258 259 5.760253 CCCAGCCACTAGTAATGATACAAAG 59.240 44.000 0.00 0.00 34.29 2.77
259 260 5.760253 CCAGCCACTAGTAATGATACAAAGG 59.240 44.000 0.00 0.00 34.29 3.11
260 261 5.237344 CAGCCACTAGTAATGATACAAAGGC 59.763 44.000 0.00 0.00 37.80 4.35
261 262 4.515567 GCCACTAGTAATGATACAAAGGCC 59.484 45.833 0.00 0.00 34.58 5.19
262 263 5.680619 CCACTAGTAATGATACAAAGGCCA 58.319 41.667 5.01 0.00 34.29 5.36
263 264 6.119536 CCACTAGTAATGATACAAAGGCCAA 58.880 40.000 5.01 0.00 34.29 4.52
264 265 6.260936 CCACTAGTAATGATACAAAGGCCAAG 59.739 42.308 5.01 0.00 34.29 3.61
265 266 6.260936 CACTAGTAATGATACAAAGGCCAAGG 59.739 42.308 5.01 0.00 34.29 3.61
266 267 4.536765 AGTAATGATACAAAGGCCAAGGG 58.463 43.478 5.01 0.00 34.29 3.95
267 268 3.473113 AATGATACAAAGGCCAAGGGT 57.527 42.857 5.01 0.00 0.00 4.34
268 269 2.990740 TGATACAAAGGCCAAGGGTT 57.009 45.000 5.01 0.00 0.00 4.11
269 270 3.252554 TGATACAAAGGCCAAGGGTTT 57.747 42.857 5.01 0.00 0.00 3.27
270 271 3.161866 TGATACAAAGGCCAAGGGTTTC 58.838 45.455 5.01 3.06 0.00 2.78
271 272 2.757894 TACAAAGGCCAAGGGTTTCA 57.242 45.000 5.01 0.00 0.00 2.69
272 273 1.872773 ACAAAGGCCAAGGGTTTCAA 58.127 45.000 5.01 0.00 0.00 2.69
273 274 1.484653 ACAAAGGCCAAGGGTTTCAAC 59.515 47.619 5.01 0.00 0.00 3.18
287 288 5.791336 GGTTTCAACCTCCTTCAAAAGAT 57.209 39.130 1.08 0.00 45.75 2.40
288 289 6.894339 GGTTTCAACCTCCTTCAAAAGATA 57.106 37.500 1.08 0.00 45.75 1.98
289 290 6.914259 GGTTTCAACCTCCTTCAAAAGATAG 58.086 40.000 1.08 0.00 45.75 2.08
290 291 6.490381 GGTTTCAACCTCCTTCAAAAGATAGT 59.510 38.462 1.08 0.00 45.75 2.12
291 292 7.014326 GGTTTCAACCTCCTTCAAAAGATAGTT 59.986 37.037 1.08 0.00 45.75 2.24
292 293 8.414003 GTTTCAACCTCCTTCAAAAGATAGTTT 58.586 33.333 0.00 0.00 0.00 2.66
293 294 7.745620 TCAACCTCCTTCAAAAGATAGTTTC 57.254 36.000 0.00 0.00 0.00 2.78
294 295 7.287061 TCAACCTCCTTCAAAAGATAGTTTCA 58.713 34.615 0.00 0.00 0.00 2.69
295 296 7.777910 TCAACCTCCTTCAAAAGATAGTTTCAA 59.222 33.333 0.00 0.00 0.00 2.69
296 297 8.579863 CAACCTCCTTCAAAAGATAGTTTCAAT 58.420 33.333 0.00 0.00 0.00 2.57
297 298 8.712228 ACCTCCTTCAAAAGATAGTTTCAATT 57.288 30.769 0.00 0.00 0.00 2.32
298 299 8.579863 ACCTCCTTCAAAAGATAGTTTCAATTG 58.420 33.333 0.00 0.00 0.00 2.32
299 300 8.579863 CCTCCTTCAAAAGATAGTTTCAATTGT 58.420 33.333 5.13 0.00 0.00 2.71
300 301 9.971922 CTCCTTCAAAAGATAGTTTCAATTGTT 57.028 29.630 5.13 0.00 0.00 2.83
375 376 9.758651 AATATATTACAACTAATGCTCACGTCA 57.241 29.630 0.00 0.00 0.00 4.35
376 377 9.758651 ATATATTACAACTAATGCTCACGTCAA 57.241 29.630 0.00 0.00 0.00 3.18
377 378 6.985188 ATTACAACTAATGCTCACGTCAAT 57.015 33.333 0.00 0.00 0.00 2.57
378 379 4.928661 ACAACTAATGCTCACGTCAATC 57.071 40.909 0.00 0.00 0.00 2.67
379 380 3.367932 ACAACTAATGCTCACGTCAATCG 59.632 43.478 0.00 0.00 46.00 3.34
380 381 1.927174 ACTAATGCTCACGTCAATCGC 59.073 47.619 0.00 0.00 44.19 4.58
381 382 0.920664 TAATGCTCACGTCAATCGCG 59.079 50.000 0.00 0.00 44.19 5.87
382 383 2.296692 AATGCTCACGTCAATCGCGC 62.297 55.000 0.00 0.00 44.19 6.86
383 384 3.478394 GCTCACGTCAATCGCGCA 61.478 61.111 8.75 0.00 44.19 6.09
384 385 2.691522 CTCACGTCAATCGCGCAG 59.308 61.111 8.75 0.00 44.19 5.18
385 386 2.792290 CTCACGTCAATCGCGCAGG 61.792 63.158 8.75 0.00 44.19 4.85
386 387 3.853330 CACGTCAATCGCGCAGGG 61.853 66.667 8.75 0.00 44.19 4.45
389 390 2.185867 GTCAATCGCGCAGGGGTA 59.814 61.111 8.75 0.00 42.39 3.69
390 391 2.171725 GTCAATCGCGCAGGGGTAC 61.172 63.158 8.75 0.00 42.39 3.34
415 416 5.567552 GTCTAGCTAAACAGTACCGTGTAG 58.432 45.833 2.45 2.45 30.92 2.74
417 418 4.170292 AGCTAAACAGTACCGTGTAGTG 57.830 45.455 8.02 13.91 30.50 2.74
420 421 2.433868 AACAGTACCGTGTAGTGCAG 57.566 50.000 14.90 0.00 0.00 4.41
423 424 1.540267 CAGTACCGTGTAGTGCAGTCT 59.460 52.381 0.00 0.00 0.00 3.24
435 436 4.803098 AGTGCAGTCTACGAAATTAGGT 57.197 40.909 0.00 0.00 0.00 3.08
436 437 5.148651 AGTGCAGTCTACGAAATTAGGTT 57.851 39.130 0.00 0.00 0.00 3.50
439 440 5.178809 GTGCAGTCTACGAAATTAGGTTGTT 59.821 40.000 0.00 0.00 0.00 2.83
440 441 5.761234 TGCAGTCTACGAAATTAGGTTGTTT 59.239 36.000 0.00 0.00 0.00 2.83
441 442 6.073440 TGCAGTCTACGAAATTAGGTTGTTTC 60.073 38.462 0.00 0.00 0.00 2.78
442 443 6.147328 GCAGTCTACGAAATTAGGTTGTTTCT 59.853 38.462 0.00 0.00 33.32 2.52
443 444 7.330208 GCAGTCTACGAAATTAGGTTGTTTCTA 59.670 37.037 0.00 0.00 33.32 2.10
489 499 1.743623 AATCCGCGCGATTTCCACA 60.744 52.632 34.63 4.20 38.02 4.17
491 501 1.705337 ATCCGCGCGATTTCCACAAG 61.705 55.000 34.63 10.51 0.00 3.16
519 529 2.119457 GGACAAACAAGCAAGCGAAAG 58.881 47.619 0.00 0.00 0.00 2.62
521 531 3.179048 GACAAACAAGCAAGCGAAAGTT 58.821 40.909 0.00 0.00 0.00 2.66
522 532 3.584834 ACAAACAAGCAAGCGAAAGTTT 58.415 36.364 0.00 0.00 33.66 2.66
544 554 1.593196 GCCGATCCCATTTCGATCAA 58.407 50.000 0.00 0.00 38.88 2.57
550 560 4.609113 CGATCCCATTTCGATCAAACATCG 60.609 45.833 0.00 0.00 42.38 3.84
626 642 2.857483 TCCGCACAAATTCTTGGAAGA 58.143 42.857 0.00 0.00 36.82 2.87
627 643 6.895039 TGTTCCGCACAAATTCTTGGAAGAA 61.895 40.000 4.34 4.34 39.89 2.52
628 644 8.603203 TGTTCCGCACAAATTCTTGGAAGAAG 62.603 42.308 7.81 0.00 39.36 2.85
641 657 8.443953 TTCTTGGAAGAAGAAGAAAGAAGAAG 57.556 34.615 0.00 0.00 39.95 2.85
742 762 3.961182 TGGACTCGCTATCAATACGTTC 58.039 45.455 0.00 0.00 0.00 3.95
747 767 4.201891 ACTCGCTATCAATACGTTCGACTT 60.202 41.667 0.00 0.00 0.00 3.01
758 778 2.019951 TTCGACTTCGGCGCTTGAC 61.020 57.895 7.64 0.00 40.29 3.18
799 825 3.939740 TCTTTTAGGCCTCTGCATCAT 57.060 42.857 9.68 0.00 40.13 2.45
807 833 1.612463 GCCTCTGCATCATTTCCATCC 59.388 52.381 0.00 0.00 37.47 3.51
893 925 2.597340 CCGGATGCCCCATCTTGT 59.403 61.111 0.00 0.00 40.39 3.16
896 928 0.533755 CGGATGCCCCATCTTGTCTC 60.534 60.000 5.32 0.00 40.39 3.36
902 934 0.392998 CCCCATCTTGTCTCCCGTTG 60.393 60.000 0.00 0.00 0.00 4.10
952 985 1.076533 GCTTGCGACGTGCTTAGCTA 61.077 55.000 19.45 0.00 46.63 3.32
974 1024 1.001181 CTCCCAAACCCATTGCAACAG 59.999 52.381 0.00 0.00 37.73 3.16
999 1076 3.126514 CCTGAGCATAAGCAAACTCACTG 59.873 47.826 0.00 0.00 45.49 3.66
1177 1269 1.335964 CGGACGCTGAAGAGAAACTGA 60.336 52.381 0.00 0.00 0.00 3.41
1296 1388 1.154263 CACCGACGACGAGTTCCTC 60.154 63.158 9.28 0.00 42.66 3.71
1478 1623 2.536803 GCGGTAAAATTCTGCATGCATG 59.463 45.455 22.97 22.70 37.18 4.06
1491 1691 0.798159 ATGCATGCATACATACGCCG 59.202 50.000 31.35 0.00 33.67 6.46
1503 1703 0.441145 ATACGCCGAAGTTCGCAAAC 59.559 50.000 19.86 7.62 38.82 2.93
1792 2043 2.325082 GCGTCATGCCAAACTCGGT 61.325 57.895 0.00 0.00 37.76 4.69
2175 2432 6.345298 TCATCGAGCATGGTTTATCTACAAA 58.655 36.000 0.00 0.00 32.64 2.83
2185 2442 9.206870 CATGGTTTATCTACAAAATTTGTGCTT 57.793 29.630 20.40 7.81 45.03 3.91
2273 2582 0.881118 GCTTCTGAATGAAACCCGCA 59.119 50.000 0.00 0.00 33.79 5.69
2290 2599 2.489971 CGCAAGGGAGTTTAGTTCACA 58.510 47.619 0.00 0.00 0.00 3.58
2291 2600 2.875933 CGCAAGGGAGTTTAGTTCACAA 59.124 45.455 0.00 0.00 0.00 3.33
2292 2601 3.314080 CGCAAGGGAGTTTAGTTCACAAA 59.686 43.478 0.00 0.00 0.00 2.83
2293 2602 4.554723 CGCAAGGGAGTTTAGTTCACAAAG 60.555 45.833 0.00 0.00 0.00 2.77
2294 2603 4.578928 GCAAGGGAGTTTAGTTCACAAAGA 59.421 41.667 0.00 0.00 0.00 2.52
2295 2604 5.505819 GCAAGGGAGTTTAGTTCACAAAGAC 60.506 44.000 0.00 0.00 0.00 3.01
2296 2605 5.632034 AGGGAGTTTAGTTCACAAAGACT 57.368 39.130 0.00 0.00 0.00 3.24
2380 3739 9.715121 TTACTTAGTGTCACCCTTGTATTTTAG 57.285 33.333 0.00 0.00 0.00 1.85
2384 3743 4.395231 GTGTCACCCTTGTATTTTAGCCTC 59.605 45.833 0.00 0.00 0.00 4.70
2401 3760 5.153950 AGCCTCTATTCTTCGTGAGTTTT 57.846 39.130 0.00 0.00 0.00 2.43
2407 3766 7.148722 CCTCTATTCTTCGTGAGTTTTGTCTTC 60.149 40.741 0.00 0.00 0.00 2.87
2416 3775 5.566826 CGTGAGTTTTGTCTTCCATCTCCTA 60.567 44.000 0.00 0.00 0.00 2.94
2473 3832 8.469309 ACTCATAAACTGGCATTGCTATATTT 57.531 30.769 8.82 8.73 0.00 1.40
2516 3875 1.593006 CGGAAGTGATGTACGCCATTC 59.407 52.381 0.00 0.00 32.56 2.67
2526 3885 0.251916 TACGCCATTCCCCACTTCAG 59.748 55.000 0.00 0.00 0.00 3.02
2535 3894 0.178992 CCCCACTTCAGTTGGCAAGA 60.179 55.000 0.00 0.00 30.07 3.02
2544 3903 6.372659 CACTTCAGTTGGCAAGATAGTGTTAT 59.627 38.462 17.02 0.00 0.00 1.89
2555 3914 6.806739 GCAAGATAGTGTTATGGTGGAAAAAC 59.193 38.462 0.00 0.00 0.00 2.43
2557 3916 6.469410 AGATAGTGTTATGGTGGAAAAACGA 58.531 36.000 0.00 0.00 0.00 3.85
2577 3936 3.000322 CGAGTACATGGAATCGAGCAAAC 60.000 47.826 22.83 0.00 37.35 2.93
2592 3951 4.240096 GAGCAAACTAAAATGCATGTGCT 58.760 39.130 0.00 0.00 44.95 4.40
2715 4075 5.367060 AGAGGTTGGAGAGAGTTTTTACTGT 59.633 40.000 0.00 0.00 0.00 3.55
2799 4161 7.975058 TCGTGATAACAAGGAATAACGATACAA 59.025 33.333 0.00 0.00 34.73 2.41
2841 4203 6.006759 TGAATGAGATACTAGAGCATGACG 57.993 41.667 0.00 0.00 0.00 4.35
2842 4204 3.906014 TGAGATACTAGAGCATGACGC 57.094 47.619 0.00 0.00 42.91 5.19
2851 4213 3.167945 GCATGACGCGTGCTTTGC 61.168 61.111 20.70 16.29 42.44 3.68
2852 4214 2.502510 CATGACGCGTGCTTTGCC 60.503 61.111 20.70 0.00 0.00 4.52
2853 4215 4.088762 ATGACGCGTGCTTTGCCG 62.089 61.111 20.70 0.00 0.00 5.69
2858 4220 4.160635 GCGTGCTTTGCCGCGTAT 62.161 61.111 4.92 0.00 38.10 3.06
2859 4221 2.804759 GCGTGCTTTGCCGCGTATA 61.805 57.895 4.92 0.00 38.10 1.47
2860 4222 1.931551 CGTGCTTTGCCGCGTATAT 59.068 52.632 4.92 0.00 0.00 0.86
2861 4223 0.303493 CGTGCTTTGCCGCGTATATT 59.697 50.000 4.92 0.00 0.00 1.28
2862 4224 1.656429 CGTGCTTTGCCGCGTATATTC 60.656 52.381 4.92 0.00 0.00 1.75
2863 4225 1.597663 GTGCTTTGCCGCGTATATTCT 59.402 47.619 4.92 0.00 0.00 2.40
2864 4226 2.031683 GTGCTTTGCCGCGTATATTCTT 59.968 45.455 4.92 0.00 0.00 2.52
2865 4227 2.286833 TGCTTTGCCGCGTATATTCTTC 59.713 45.455 4.92 0.00 0.00 2.87
2866 4228 2.659291 GCTTTGCCGCGTATATTCTTCG 60.659 50.000 4.92 0.00 0.00 3.79
2867 4229 1.493772 TTGCCGCGTATATTCTTCGG 58.506 50.000 4.92 0.00 42.68 4.30
2868 4230 0.386476 TGCCGCGTATATTCTTCGGT 59.614 50.000 4.92 0.00 41.89 4.69
2869 4231 1.202440 TGCCGCGTATATTCTTCGGTT 60.202 47.619 4.92 0.00 41.89 4.44
2870 4232 1.191647 GCCGCGTATATTCTTCGGTTG 59.808 52.381 4.92 0.00 41.89 3.77
2871 4233 2.466846 CCGCGTATATTCTTCGGTTGT 58.533 47.619 4.92 0.00 35.75 3.32
2872 4234 2.217847 CCGCGTATATTCTTCGGTTGTG 59.782 50.000 4.92 0.00 35.75 3.33
2873 4235 2.217847 CGCGTATATTCTTCGGTTGTGG 59.782 50.000 0.00 0.00 0.00 4.17
2874 4236 2.542595 GCGTATATTCTTCGGTTGTGGG 59.457 50.000 0.00 0.00 0.00 4.61
2875 4237 3.788937 CGTATATTCTTCGGTTGTGGGT 58.211 45.455 0.00 0.00 0.00 4.51
2876 4238 4.186159 CGTATATTCTTCGGTTGTGGGTT 58.814 43.478 0.00 0.00 0.00 4.11
2877 4239 5.350633 CGTATATTCTTCGGTTGTGGGTTA 58.649 41.667 0.00 0.00 0.00 2.85
2878 4240 5.811613 CGTATATTCTTCGGTTGTGGGTTAA 59.188 40.000 0.00 0.00 0.00 2.01
2879 4241 6.019318 CGTATATTCTTCGGTTGTGGGTTAAG 60.019 42.308 0.00 0.00 0.00 1.85
2880 4242 3.564053 TTCTTCGGTTGTGGGTTAAGT 57.436 42.857 0.00 0.00 0.00 2.24
2881 4243 3.116079 TCTTCGGTTGTGGGTTAAGTC 57.884 47.619 0.00 0.00 0.00 3.01
2882 4244 2.148768 CTTCGGTTGTGGGTTAAGTCC 58.851 52.381 0.00 0.00 0.00 3.85
2883 4245 1.129917 TCGGTTGTGGGTTAAGTCCA 58.870 50.000 0.00 0.00 0.00 4.02
2896 4258 8.943594 TGGGTTAAGTCCACTATGTTTATTTT 57.056 30.769 0.00 0.00 0.00 1.82
2897 4259 8.798402 TGGGTTAAGTCCACTATGTTTATTTTG 58.202 33.333 0.00 0.00 0.00 2.44
2898 4260 8.799367 GGGTTAAGTCCACTATGTTTATTTTGT 58.201 33.333 0.00 0.00 0.00 2.83
2899 4261 9.620660 GGTTAAGTCCACTATGTTTATTTTGTG 57.379 33.333 0.00 0.00 0.00 3.33
2902 4264 6.677913 AGTCCACTATGTTTATTTTGTGTGC 58.322 36.000 0.00 0.00 0.00 4.57
2903 4265 6.264292 AGTCCACTATGTTTATTTTGTGTGCA 59.736 34.615 0.00 0.00 0.00 4.57
2904 4266 6.582295 GTCCACTATGTTTATTTTGTGTGCAG 59.418 38.462 0.00 0.00 0.00 4.41
2905 4267 6.264292 TCCACTATGTTTATTTTGTGTGCAGT 59.736 34.615 0.00 0.00 0.00 4.40
2906 4268 6.582295 CCACTATGTTTATTTTGTGTGCAGTC 59.418 38.462 0.00 0.00 0.00 3.51
2907 4269 7.362662 CACTATGTTTATTTTGTGTGCAGTCT 58.637 34.615 0.00 0.00 0.00 3.24
2908 4270 8.503196 CACTATGTTTATTTTGTGTGCAGTCTA 58.497 33.333 0.00 0.00 0.00 2.59
2909 4271 9.231297 ACTATGTTTATTTTGTGTGCAGTCTAT 57.769 29.630 0.00 0.00 0.00 1.98
2912 4274 8.795786 TGTTTATTTTGTGTGCAGTCTATTTC 57.204 30.769 0.00 0.00 0.00 2.17
2913 4275 8.409371 TGTTTATTTTGTGTGCAGTCTATTTCA 58.591 29.630 0.00 0.00 0.00 2.69
2914 4276 9.243637 GTTTATTTTGTGTGCAGTCTATTTCAA 57.756 29.630 0.00 0.00 0.00 2.69
2915 4277 9.979578 TTTATTTTGTGTGCAGTCTATTTCAAT 57.020 25.926 0.00 0.00 0.00 2.57
2916 4278 9.979578 TTATTTTGTGTGCAGTCTATTTCAATT 57.020 25.926 0.00 0.00 0.00 2.32
2917 4279 7.697352 TTTTGTGTGCAGTCTATTTCAATTG 57.303 32.000 0.00 0.00 0.00 2.32
2918 4280 5.375417 TGTGTGCAGTCTATTTCAATTGG 57.625 39.130 5.42 0.00 0.00 3.16
2919 4281 4.826733 TGTGTGCAGTCTATTTCAATTGGT 59.173 37.500 5.42 0.00 0.00 3.67
2920 4282 5.301551 TGTGTGCAGTCTATTTCAATTGGTT 59.698 36.000 5.42 0.00 0.00 3.67
2921 4283 5.630680 GTGTGCAGTCTATTTCAATTGGTTG 59.369 40.000 5.42 0.00 36.65 3.77
2922 4284 5.301551 TGTGCAGTCTATTTCAATTGGTTGT 59.698 36.000 5.42 0.00 36.69 3.32
2923 4285 5.858581 GTGCAGTCTATTTCAATTGGTTGTC 59.141 40.000 5.42 0.00 36.69 3.18
2924 4286 5.048083 TGCAGTCTATTTCAATTGGTTGTCC 60.048 40.000 5.42 0.00 36.69 4.02
2925 4287 5.183904 GCAGTCTATTTCAATTGGTTGTCCT 59.816 40.000 5.42 0.00 36.69 3.85
2926 4288 6.615088 CAGTCTATTTCAATTGGTTGTCCTG 58.385 40.000 5.42 1.18 36.69 3.86
2927 4289 6.207417 CAGTCTATTTCAATTGGTTGTCCTGT 59.793 38.462 5.42 0.00 36.69 4.00
2928 4290 6.777580 AGTCTATTTCAATTGGTTGTCCTGTT 59.222 34.615 5.42 0.00 36.69 3.16
2929 4291 6.863126 GTCTATTTCAATTGGTTGTCCTGTTG 59.137 38.462 5.42 0.00 36.69 3.33
2930 4292 5.612725 ATTTCAATTGGTTGTCCTGTTGT 57.387 34.783 5.42 0.00 36.69 3.32
2931 4293 4.383850 TTCAATTGGTTGTCCTGTTGTG 57.616 40.909 5.42 0.00 36.69 3.33
2932 4294 3.360867 TCAATTGGTTGTCCTGTTGTGT 58.639 40.909 5.42 0.00 36.69 3.72
2933 4295 4.527944 TCAATTGGTTGTCCTGTTGTGTA 58.472 39.130 5.42 0.00 36.69 2.90
2934 4296 5.136828 TCAATTGGTTGTCCTGTTGTGTAT 58.863 37.500 5.42 0.00 36.69 2.29
2935 4297 6.299922 TCAATTGGTTGTCCTGTTGTGTATA 58.700 36.000 5.42 0.00 36.69 1.47
2936 4298 6.773200 TCAATTGGTTGTCCTGTTGTGTATAA 59.227 34.615 5.42 0.00 36.69 0.98
2937 4299 7.450014 TCAATTGGTTGTCCTGTTGTGTATAAT 59.550 33.333 5.42 0.00 36.69 1.28
2938 4300 7.775053 ATTGGTTGTCCTGTTGTGTATAATT 57.225 32.000 0.00 0.00 34.23 1.40
2939 4301 6.567687 TGGTTGTCCTGTTGTGTATAATTG 57.432 37.500 0.00 0.00 34.23 2.32
2940 4302 6.065374 TGGTTGTCCTGTTGTGTATAATTGT 58.935 36.000 0.00 0.00 34.23 2.71
2941 4303 6.205853 TGGTTGTCCTGTTGTGTATAATTGTC 59.794 38.462 0.00 0.00 34.23 3.18
2942 4304 6.304126 GTTGTCCTGTTGTGTATAATTGTCG 58.696 40.000 0.00 0.00 0.00 4.35
2943 4305 5.785243 TGTCCTGTTGTGTATAATTGTCGA 58.215 37.500 0.00 0.00 0.00 4.20
2944 4306 6.403049 TGTCCTGTTGTGTATAATTGTCGAT 58.597 36.000 0.00 0.00 0.00 3.59
2945 4307 6.876789 TGTCCTGTTGTGTATAATTGTCGATT 59.123 34.615 0.00 0.00 0.00 3.34
2946 4308 8.035984 TGTCCTGTTGTGTATAATTGTCGATTA 58.964 33.333 0.00 0.00 34.82 1.75
2947 4309 8.540492 GTCCTGTTGTGTATAATTGTCGATTAG 58.460 37.037 0.00 0.00 33.87 1.73
2948 4310 8.255206 TCCTGTTGTGTATAATTGTCGATTAGT 58.745 33.333 0.00 0.00 33.87 2.24
2949 4311 8.879759 CCTGTTGTGTATAATTGTCGATTAGTT 58.120 33.333 0.00 0.00 33.87 2.24
2950 4312 9.689075 CTGTTGTGTATAATTGTCGATTAGTTG 57.311 33.333 0.00 0.00 33.87 3.16
2951 4313 9.210329 TGTTGTGTATAATTGTCGATTAGTTGT 57.790 29.630 0.00 0.00 33.87 3.32
2952 4314 9.472995 GTTGTGTATAATTGTCGATTAGTTGTG 57.527 33.333 0.00 0.00 33.87 3.33
2953 4315 7.680982 TGTGTATAATTGTCGATTAGTTGTGC 58.319 34.615 0.00 0.00 33.87 4.57
2954 4316 7.547722 TGTGTATAATTGTCGATTAGTTGTGCT 59.452 33.333 0.00 0.00 33.87 4.40
2955 4317 9.027129 GTGTATAATTGTCGATTAGTTGTGCTA 57.973 33.333 0.00 0.00 33.87 3.49
2956 4318 9.758651 TGTATAATTGTCGATTAGTTGTGCTAT 57.241 29.630 0.00 0.00 33.87 2.97
2982 4344 6.389830 AGCAGTGACAATCATGTTTAAACA 57.610 33.333 22.58 22.58 40.74 2.83
2984 4346 7.436118 AGCAGTGACAATCATGTTTAAACATT 58.564 30.769 27.33 15.16 46.95 2.71
2985 4347 7.927629 AGCAGTGACAATCATGTTTAAACATTT 59.072 29.630 27.33 18.66 46.95 2.32
2986 4348 8.550376 GCAGTGACAATCATGTTTAAACATTTT 58.450 29.630 27.33 20.74 46.95 1.82
2988 4350 9.814899 AGTGACAATCATGTTTAAACATTTTCA 57.185 25.926 27.33 19.71 46.95 2.69
3019 4381 9.244292 AGTATCAGTCTAGTGAACTAATGAACA 57.756 33.333 0.00 0.00 0.00 3.18
3020 4382 9.856488 GTATCAGTCTAGTGAACTAATGAACAA 57.144 33.333 0.00 0.00 0.00 2.83
3022 4384 9.950496 ATCAGTCTAGTGAACTAATGAACAATT 57.050 29.630 0.00 0.00 0.00 2.32
3023 4385 9.208022 TCAGTCTAGTGAACTAATGAACAATTG 57.792 33.333 3.24 3.24 0.00 2.32
3024 4386 8.993121 CAGTCTAGTGAACTAATGAACAATTGT 58.007 33.333 4.92 4.92 0.00 2.71
3025 4387 9.561069 AGTCTAGTGAACTAATGAACAATTGTT 57.439 29.630 23.49 23.49 41.64 2.83
3026 4388 9.599322 GTCTAGTGAACTAATGAACAATTGTTG 57.401 33.333 27.85 15.18 38.56 3.33
3028 4390 9.385902 CTAGTGAACTAATGAACAATTGTTGTG 57.614 33.333 27.85 14.23 44.59 3.33
3029 4391 7.771183 AGTGAACTAATGAACAATTGTTGTGT 58.229 30.769 27.85 14.09 44.59 3.72
3030 4392 7.701924 AGTGAACTAATGAACAATTGTTGTGTG 59.298 33.333 27.85 15.16 44.59 3.82
3031 4393 7.700234 GTGAACTAATGAACAATTGTTGTGTGA 59.300 33.333 27.85 8.61 44.59 3.58
3032 4394 7.914871 TGAACTAATGAACAATTGTTGTGTGAG 59.085 33.333 27.85 18.30 44.59 3.51
3033 4395 6.208644 ACTAATGAACAATTGTTGTGTGAGC 58.791 36.000 27.85 12.09 44.59 4.26
3034 4396 4.924305 ATGAACAATTGTTGTGTGAGCT 57.076 36.364 27.85 0.46 44.59 4.09
3035 4397 4.717233 TGAACAATTGTTGTGTGAGCTT 57.283 36.364 27.85 0.00 44.59 3.74
3036 4398 4.671377 TGAACAATTGTTGTGTGAGCTTC 58.329 39.130 27.85 10.23 44.59 3.86
3037 4399 3.338818 ACAATTGTTGTGTGAGCTTCG 57.661 42.857 4.92 0.00 43.48 3.79
3038 4400 2.682856 ACAATTGTTGTGTGAGCTTCGT 59.317 40.909 4.92 0.00 43.48 3.85
3039 4401 3.128589 ACAATTGTTGTGTGAGCTTCGTT 59.871 39.130 4.92 0.00 43.48 3.85
3040 4402 3.609103 ATTGTTGTGTGAGCTTCGTTC 57.391 42.857 0.00 0.00 0.00 3.95
3041 4403 0.927537 TGTTGTGTGAGCTTCGTTCG 59.072 50.000 0.00 0.00 0.00 3.95
3042 4404 1.205657 GTTGTGTGAGCTTCGTTCGA 58.794 50.000 0.00 0.00 0.00 3.71
3043 4405 1.792949 GTTGTGTGAGCTTCGTTCGAT 59.207 47.619 0.00 0.00 0.00 3.59
3044 4406 2.984471 GTTGTGTGAGCTTCGTTCGATA 59.016 45.455 0.00 0.00 0.00 2.92
3045 4407 2.592194 TGTGTGAGCTTCGTTCGATAC 58.408 47.619 0.00 0.00 0.00 2.24
3046 4408 2.030628 TGTGTGAGCTTCGTTCGATACA 60.031 45.455 0.00 0.00 0.00 2.29
3047 4409 2.341760 GTGTGAGCTTCGTTCGATACAC 59.658 50.000 0.00 0.00 0.00 2.90
3048 4410 1.918609 GTGAGCTTCGTTCGATACACC 59.081 52.381 0.00 0.00 0.00 4.16
3049 4411 1.135199 TGAGCTTCGTTCGATACACCC 60.135 52.381 0.00 0.00 0.00 4.61
3050 4412 0.179145 AGCTTCGTTCGATACACCCG 60.179 55.000 0.00 0.00 0.00 5.28
3051 4413 0.179156 GCTTCGTTCGATACACCCGA 60.179 55.000 0.00 0.00 0.00 5.14
3052 4414 1.823828 CTTCGTTCGATACACCCGAG 58.176 55.000 0.00 0.00 37.35 4.63
3053 4415 0.179156 TTCGTTCGATACACCCGAGC 60.179 55.000 0.00 0.00 37.35 5.03
3054 4416 1.028330 TCGTTCGATACACCCGAGCT 61.028 55.000 0.00 0.00 37.35 4.09
3055 4417 0.179145 CGTTCGATACACCCGAGCTT 60.179 55.000 0.00 0.00 37.35 3.74
3056 4418 1.064505 CGTTCGATACACCCGAGCTTA 59.935 52.381 0.00 0.00 37.35 3.09
3057 4419 2.478370 CGTTCGATACACCCGAGCTTAA 60.478 50.000 0.00 0.00 37.35 1.85
3058 4420 3.714391 GTTCGATACACCCGAGCTTAAT 58.286 45.455 0.00 0.00 37.35 1.40
3059 4421 4.117685 GTTCGATACACCCGAGCTTAATT 58.882 43.478 0.00 0.00 37.35 1.40
3060 4422 4.395959 TCGATACACCCGAGCTTAATTT 57.604 40.909 0.00 0.00 0.00 1.82
3061 4423 4.365723 TCGATACACCCGAGCTTAATTTC 58.634 43.478 0.00 0.00 0.00 2.17
3062 4424 4.098960 TCGATACACCCGAGCTTAATTTCT 59.901 41.667 0.00 0.00 0.00 2.52
3063 4425 4.809426 CGATACACCCGAGCTTAATTTCTT 59.191 41.667 0.00 0.00 0.00 2.52
3064 4426 5.276868 CGATACACCCGAGCTTAATTTCTTG 60.277 44.000 0.00 0.00 0.00 3.02
3065 4427 2.488153 ACACCCGAGCTTAATTTCTTGC 59.512 45.455 0.00 0.00 0.00 4.01
3066 4428 2.749621 CACCCGAGCTTAATTTCTTGCT 59.250 45.455 0.00 0.00 38.59 3.91
3067 4429 3.010420 ACCCGAGCTTAATTTCTTGCTC 58.990 45.455 0.00 0.00 45.79 4.26
3073 4435 5.990120 AGCTTAATTTCTTGCTCAATGGT 57.010 34.783 0.00 0.00 0.00 3.55
3074 4436 6.350629 AGCTTAATTTCTTGCTCAATGGTT 57.649 33.333 0.00 0.00 0.00 3.67
3075 4437 7.466746 AGCTTAATTTCTTGCTCAATGGTTA 57.533 32.000 0.00 0.00 0.00 2.85
3076 4438 8.071177 AGCTTAATTTCTTGCTCAATGGTTAT 57.929 30.769 0.00 0.00 0.00 1.89
3077 4439 8.534496 AGCTTAATTTCTTGCTCAATGGTTATT 58.466 29.630 0.00 0.00 0.00 1.40
3078 4440 9.801873 GCTTAATTTCTTGCTCAATGGTTATTA 57.198 29.630 0.00 0.00 0.00 0.98
3081 4443 8.986477 AATTTCTTGCTCAATGGTTATTACAC 57.014 30.769 0.00 0.00 0.00 2.90
3082 4444 5.794687 TCTTGCTCAATGGTTATTACACG 57.205 39.130 0.00 0.00 0.00 4.49
3083 4445 4.634004 TCTTGCTCAATGGTTATTACACGG 59.366 41.667 0.00 0.00 0.00 4.94
3084 4446 4.209307 TGCTCAATGGTTATTACACGGA 57.791 40.909 0.00 0.00 0.00 4.69
3085 4447 4.580868 TGCTCAATGGTTATTACACGGAA 58.419 39.130 0.00 0.00 0.00 4.30
3086 4448 5.189928 TGCTCAATGGTTATTACACGGAAT 58.810 37.500 0.00 0.00 0.00 3.01
3087 4449 6.350103 TGCTCAATGGTTATTACACGGAATA 58.650 36.000 0.00 0.00 0.00 1.75
3088 4450 6.995686 TGCTCAATGGTTATTACACGGAATAT 59.004 34.615 0.00 0.00 0.00 1.28
3089 4451 7.500892 TGCTCAATGGTTATTACACGGAATATT 59.499 33.333 0.00 0.00 0.00 1.28
3090 4452 8.995220 GCTCAATGGTTATTACACGGAATATTA 58.005 33.333 0.00 0.00 0.00 0.98
3103 4465 8.801882 ACACGGAATATTAGAAAAATGGAAGA 57.198 30.769 0.00 0.00 0.00 2.87
3104 4466 9.238368 ACACGGAATATTAGAAAAATGGAAGAA 57.762 29.630 0.00 0.00 0.00 2.52
3119 4481 9.547279 AAAATGGAAGAATAGAATGGTAAACCT 57.453 29.630 0.02 0.00 36.82 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.551454 GCAACAGTAACAGTCGTCAGGTA 60.551 47.826 0.00 0.00 0.00 3.08
1 2 2.802057 GCAACAGTAACAGTCGTCAGGT 60.802 50.000 0.00 0.00 0.00 4.00
2 3 1.792949 GCAACAGTAACAGTCGTCAGG 59.207 52.381 0.00 0.00 0.00 3.86
3 4 2.743938 AGCAACAGTAACAGTCGTCAG 58.256 47.619 0.00 0.00 0.00 3.51
4 5 2.882927 AGCAACAGTAACAGTCGTCA 57.117 45.000 0.00 0.00 0.00 4.35
5 6 3.858238 GGATAGCAACAGTAACAGTCGTC 59.142 47.826 0.00 0.00 0.00 4.20
6 7 3.510360 AGGATAGCAACAGTAACAGTCGT 59.490 43.478 0.00 0.00 0.00 4.34
7 8 4.111375 AGGATAGCAACAGTAACAGTCG 57.889 45.455 0.00 0.00 0.00 4.18
8 9 6.210287 AGTAGGATAGCAACAGTAACAGTC 57.790 41.667 0.00 0.00 0.00 3.51
9 10 7.899648 ATAGTAGGATAGCAACAGTAACAGT 57.100 36.000 0.00 0.00 0.00 3.55
27 28 8.021973 CGACCTAGCACCTACAAAATATAGTAG 58.978 40.741 0.00 0.00 37.92 2.57
28 29 7.503566 ACGACCTAGCACCTACAAAATATAGTA 59.496 37.037 0.00 0.00 0.00 1.82
29 30 6.323225 ACGACCTAGCACCTACAAAATATAGT 59.677 38.462 0.00 0.00 0.00 2.12
30 31 6.641314 CACGACCTAGCACCTACAAAATATAG 59.359 42.308 0.00 0.00 0.00 1.31
31 32 6.509656 CACGACCTAGCACCTACAAAATATA 58.490 40.000 0.00 0.00 0.00 0.86
32 33 5.357257 CACGACCTAGCACCTACAAAATAT 58.643 41.667 0.00 0.00 0.00 1.28
33 34 4.751060 CACGACCTAGCACCTACAAAATA 58.249 43.478 0.00 0.00 0.00 1.40
34 35 3.596214 CACGACCTAGCACCTACAAAAT 58.404 45.455 0.00 0.00 0.00 1.82
35 36 2.868839 GCACGACCTAGCACCTACAAAA 60.869 50.000 0.00 0.00 0.00 2.44
36 37 1.337447 GCACGACCTAGCACCTACAAA 60.337 52.381 0.00 0.00 0.00 2.83
37 38 0.245539 GCACGACCTAGCACCTACAA 59.754 55.000 0.00 0.00 0.00 2.41
38 39 0.611062 AGCACGACCTAGCACCTACA 60.611 55.000 0.00 0.00 0.00 2.74
39 40 1.065251 GTAGCACGACCTAGCACCTAC 59.935 57.143 0.00 0.00 0.00 3.18
40 41 1.064906 AGTAGCACGACCTAGCACCTA 60.065 52.381 0.00 0.00 0.00 3.08
41 42 0.323542 AGTAGCACGACCTAGCACCT 60.324 55.000 0.00 0.00 0.00 4.00
42 43 0.179134 CAGTAGCACGACCTAGCACC 60.179 60.000 0.00 0.00 0.00 5.01
43 44 0.802607 GCAGTAGCACGACCTAGCAC 60.803 60.000 0.00 0.00 41.58 4.40
44 45 1.511305 GCAGTAGCACGACCTAGCA 59.489 57.895 0.00 0.00 41.58 3.49
45 46 4.403976 GCAGTAGCACGACCTAGC 57.596 61.111 0.00 0.00 41.58 3.42
53 54 9.405881 GCTATACATACAGCATTGCAGTAGCAC 62.406 44.444 17.30 2.21 43.24 4.40
54 55 7.505456 GCTATACATACAGCATTGCAGTAGCA 61.505 42.308 17.30 7.17 42.49 3.49
55 56 5.163913 GCTATACATACAGCATTGCAGTAGC 60.164 44.000 17.30 12.57 34.31 3.58
56 57 6.090493 CAGCTATACATACAGCATTGCAGTAG 59.910 42.308 17.30 12.23 40.36 2.57
57 58 5.928264 CAGCTATACATACAGCATTGCAGTA 59.072 40.000 15.11 15.11 40.36 2.74
58 59 4.753610 CAGCTATACATACAGCATTGCAGT 59.246 41.667 11.91 11.74 40.36 4.40
59 60 4.753610 ACAGCTATACATACAGCATTGCAG 59.246 41.667 11.91 5.33 40.36 4.41
60 61 4.512571 CACAGCTATACATACAGCATTGCA 59.487 41.667 11.91 0.00 40.36 4.08
61 62 4.083643 CCACAGCTATACATACAGCATTGC 60.084 45.833 0.00 0.00 40.36 3.56
62 63 4.453478 CCCACAGCTATACATACAGCATTG 59.547 45.833 0.00 0.00 40.36 2.82
63 64 4.103153 ACCCACAGCTATACATACAGCATT 59.897 41.667 0.00 0.00 40.36 3.56
64 65 3.648067 ACCCACAGCTATACATACAGCAT 59.352 43.478 0.00 0.00 40.36 3.79
65 66 3.038280 ACCCACAGCTATACATACAGCA 58.962 45.455 0.00 0.00 40.36 4.41
66 67 3.753294 ACCCACAGCTATACATACAGC 57.247 47.619 0.00 0.00 38.09 4.40
67 68 8.029522 CACTTATACCCACAGCTATACATACAG 58.970 40.741 0.00 0.00 0.00 2.74
68 69 7.507956 ACACTTATACCCACAGCTATACATACA 59.492 37.037 0.00 0.00 0.00 2.29
69 70 7.893658 ACACTTATACCCACAGCTATACATAC 58.106 38.462 0.00 0.00 0.00 2.39
70 71 9.239551 CTACACTTATACCCACAGCTATACATA 57.760 37.037 0.00 0.00 0.00 2.29
71 72 6.996180 ACACTTATACCCACAGCTATACAT 57.004 37.500 0.00 0.00 0.00 2.29
72 73 7.292319 TCTACACTTATACCCACAGCTATACA 58.708 38.462 0.00 0.00 0.00 2.29
73 74 7.756395 TCTACACTTATACCCACAGCTATAC 57.244 40.000 0.00 0.00 0.00 1.47
74 75 7.948447 ACATCTACACTTATACCCACAGCTATA 59.052 37.037 0.00 0.00 0.00 1.31
75 76 6.782988 ACATCTACACTTATACCCACAGCTAT 59.217 38.462 0.00 0.00 0.00 2.97
76 77 6.134055 ACATCTACACTTATACCCACAGCTA 58.866 40.000 0.00 0.00 0.00 3.32
77 78 4.962995 ACATCTACACTTATACCCACAGCT 59.037 41.667 0.00 0.00 0.00 4.24
78 79 5.277857 ACATCTACACTTATACCCACAGC 57.722 43.478 0.00 0.00 0.00 4.40
79 80 8.561738 AAAAACATCTACACTTATACCCACAG 57.438 34.615 0.00 0.00 0.00 3.66
104 105 9.830975 ACACAGTCATACAATTGCTTATACATA 57.169 29.630 5.05 0.00 0.00 2.29
105 106 8.737168 ACACAGTCATACAATTGCTTATACAT 57.263 30.769 5.05 0.00 0.00 2.29
106 107 8.560355 AACACAGTCATACAATTGCTTATACA 57.440 30.769 5.05 0.00 0.00 2.29
111 112 9.762933 AATTTTAACACAGTCATACAATTGCTT 57.237 25.926 5.05 0.00 0.00 3.91
112 113 9.410556 GAATTTTAACACAGTCATACAATTGCT 57.589 29.630 5.05 0.00 0.00 3.91
113 114 9.410556 AGAATTTTAACACAGTCATACAATTGC 57.589 29.630 5.05 0.00 0.00 3.56
122 123 8.868916 GCTTTTTGAAGAATTTTAACACAGTCA 58.131 29.630 0.00 0.00 0.00 3.41
123 124 9.087424 AGCTTTTTGAAGAATTTTAACACAGTC 57.913 29.630 0.00 0.00 0.00 3.51
124 125 9.087424 GAGCTTTTTGAAGAATTTTAACACAGT 57.913 29.630 0.00 0.00 0.00 3.55
125 126 9.086336 TGAGCTTTTTGAAGAATTTTAACACAG 57.914 29.630 0.00 0.00 0.00 3.66
126 127 8.994429 TGAGCTTTTTGAAGAATTTTAACACA 57.006 26.923 0.00 0.00 0.00 3.72
139 140 9.421806 CCACATACATAAATTGAGCTTTTTGAA 57.578 29.630 0.00 0.00 0.00 2.69
140 141 8.801299 TCCACATACATAAATTGAGCTTTTTGA 58.199 29.630 0.00 0.00 0.00 2.69
141 142 8.984891 TCCACATACATAAATTGAGCTTTTTG 57.015 30.769 0.00 0.00 0.00 2.44
142 143 9.023962 TCTCCACATACATAAATTGAGCTTTTT 57.976 29.630 0.00 0.00 0.00 1.94
143 144 8.579850 TCTCCACATACATAAATTGAGCTTTT 57.420 30.769 0.00 0.00 0.00 2.27
144 145 8.627403 CATCTCCACATACATAAATTGAGCTTT 58.373 33.333 0.00 0.00 0.00 3.51
145 146 7.994911 TCATCTCCACATACATAAATTGAGCTT 59.005 33.333 0.00 0.00 0.00 3.74
146 147 7.443575 GTCATCTCCACATACATAAATTGAGCT 59.556 37.037 0.00 0.00 0.00 4.09
147 148 7.227314 TGTCATCTCCACATACATAAATTGAGC 59.773 37.037 0.00 0.00 0.00 4.26
148 149 8.667076 TGTCATCTCCACATACATAAATTGAG 57.333 34.615 0.00 0.00 0.00 3.02
149 150 9.460019 TTTGTCATCTCCACATACATAAATTGA 57.540 29.630 0.00 0.00 0.00 2.57
150 151 9.507280 GTTTGTCATCTCCACATACATAAATTG 57.493 33.333 0.00 0.00 0.00 2.32
151 152 8.686334 GGTTTGTCATCTCCACATACATAAATT 58.314 33.333 0.00 0.00 29.93 1.82
152 153 7.833682 TGGTTTGTCATCTCCACATACATAAAT 59.166 33.333 0.00 0.00 29.93 1.40
153 154 7.171653 TGGTTTGTCATCTCCACATACATAAA 58.828 34.615 0.00 0.00 29.93 1.40
154 155 6.716284 TGGTTTGTCATCTCCACATACATAA 58.284 36.000 0.00 0.00 29.93 1.90
155 156 6.306643 TGGTTTGTCATCTCCACATACATA 57.693 37.500 0.00 0.00 29.93 2.29
156 157 5.178096 TGGTTTGTCATCTCCACATACAT 57.822 39.130 0.00 0.00 29.93 2.29
157 158 4.632327 TGGTTTGTCATCTCCACATACA 57.368 40.909 0.00 0.00 29.93 2.29
158 159 4.943705 ACATGGTTTGTCATCTCCACATAC 59.056 41.667 0.00 0.00 30.89 2.39
159 160 4.943093 CACATGGTTTGTCATCTCCACATA 59.057 41.667 0.00 0.00 36.00 2.29
160 161 3.760151 CACATGGTTTGTCATCTCCACAT 59.240 43.478 0.00 0.00 36.00 3.21
161 162 3.148412 CACATGGTTTGTCATCTCCACA 58.852 45.455 0.00 0.00 36.00 4.17
162 163 2.095059 GCACATGGTTTGTCATCTCCAC 60.095 50.000 0.00 0.00 36.00 4.02
163 164 2.161855 GCACATGGTTTGTCATCTCCA 58.838 47.619 0.00 0.00 36.00 3.86
164 165 2.161855 TGCACATGGTTTGTCATCTCC 58.838 47.619 0.00 0.00 36.00 3.71
165 166 5.565592 TTATGCACATGGTTTGTCATCTC 57.434 39.130 0.00 0.00 36.00 2.75
166 167 5.653330 TGATTATGCACATGGTTTGTCATCT 59.347 36.000 0.00 0.00 36.00 2.90
167 168 5.893687 TGATTATGCACATGGTTTGTCATC 58.106 37.500 0.00 0.00 36.00 2.92
168 169 5.653330 TCTGATTATGCACATGGTTTGTCAT 59.347 36.000 0.00 0.00 36.00 3.06
169 170 5.008980 TCTGATTATGCACATGGTTTGTCA 58.991 37.500 0.00 0.00 36.00 3.58
170 171 5.565592 TCTGATTATGCACATGGTTTGTC 57.434 39.130 0.00 0.00 36.00 3.18
171 172 5.981088 TTCTGATTATGCACATGGTTTGT 57.019 34.783 0.00 0.00 39.91 2.83
172 173 6.566141 TCATTCTGATTATGCACATGGTTTG 58.434 36.000 0.00 0.00 0.00 2.93
173 174 6.604396 TCTCATTCTGATTATGCACATGGTTT 59.396 34.615 0.00 0.00 0.00 3.27
174 175 6.124340 TCTCATTCTGATTATGCACATGGTT 58.876 36.000 0.00 0.00 0.00 3.67
175 176 5.687780 TCTCATTCTGATTATGCACATGGT 58.312 37.500 0.00 0.00 0.00 3.55
176 177 5.334957 GCTCTCATTCTGATTATGCACATGG 60.335 44.000 0.00 0.00 0.00 3.66
177 178 5.614887 CGCTCTCATTCTGATTATGCACATG 60.615 44.000 0.00 0.00 0.00 3.21
178 179 4.451435 CGCTCTCATTCTGATTATGCACAT 59.549 41.667 0.00 0.00 0.00 3.21
179 180 3.805971 CGCTCTCATTCTGATTATGCACA 59.194 43.478 0.00 0.00 0.00 4.57
180 181 3.363772 GCGCTCTCATTCTGATTATGCAC 60.364 47.826 0.00 0.00 0.00 4.57
181 182 2.804527 GCGCTCTCATTCTGATTATGCA 59.195 45.455 0.00 0.00 0.00 3.96
182 183 2.804527 TGCGCTCTCATTCTGATTATGC 59.195 45.455 9.73 0.00 0.00 3.14
183 184 3.805971 TGTGCGCTCTCATTCTGATTATG 59.194 43.478 9.73 0.00 0.00 1.90
184 185 4.063998 TGTGCGCTCTCATTCTGATTAT 57.936 40.909 9.73 0.00 0.00 1.28
185 186 3.525268 TGTGCGCTCTCATTCTGATTA 57.475 42.857 9.73 0.00 0.00 1.75
186 187 2.391616 TGTGCGCTCTCATTCTGATT 57.608 45.000 9.73 0.00 0.00 2.57
187 188 2.159000 TCATGTGCGCTCTCATTCTGAT 60.159 45.455 9.73 0.00 0.00 2.90
188 189 1.205417 TCATGTGCGCTCTCATTCTGA 59.795 47.619 9.73 4.00 0.00 3.27
189 190 1.326852 GTCATGTGCGCTCTCATTCTG 59.673 52.381 9.73 1.66 0.00 3.02
190 191 1.206610 AGTCATGTGCGCTCTCATTCT 59.793 47.619 9.73 8.68 0.00 2.40
191 192 1.649664 AGTCATGTGCGCTCTCATTC 58.350 50.000 9.73 6.76 0.00 2.67
192 193 2.167281 AGTAGTCATGTGCGCTCTCATT 59.833 45.455 9.73 0.00 0.00 2.57
193 194 1.753649 AGTAGTCATGTGCGCTCTCAT 59.246 47.619 9.73 8.20 0.00 2.90
194 195 1.135286 CAGTAGTCATGTGCGCTCTCA 60.135 52.381 9.73 5.93 0.00 3.27
195 196 1.135257 ACAGTAGTCATGTGCGCTCTC 60.135 52.381 9.73 0.00 0.00 3.20
196 197 0.891373 ACAGTAGTCATGTGCGCTCT 59.109 50.000 9.73 0.15 0.00 4.09
197 198 0.994995 CACAGTAGTCATGTGCGCTC 59.005 55.000 9.73 5.51 41.39 5.03
198 199 0.390340 CCACAGTAGTCATGTGCGCT 60.390 55.000 9.73 0.00 45.37 5.92
199 200 1.970917 GCCACAGTAGTCATGTGCGC 61.971 60.000 0.00 0.00 45.37 6.09
200 201 1.686566 CGCCACAGTAGTCATGTGCG 61.687 60.000 0.58 4.92 45.37 5.34
201 202 1.970917 GCGCCACAGTAGTCATGTGC 61.971 60.000 0.00 0.00 45.37 4.57
202 203 1.361668 GGCGCCACAGTAGTCATGTG 61.362 60.000 24.80 0.00 46.11 3.21
203 204 1.079127 GGCGCCACAGTAGTCATGT 60.079 57.895 24.80 0.00 0.00 3.21
204 205 1.079197 TGGCGCCACAGTAGTCATG 60.079 57.895 29.03 0.00 0.00 3.07
205 206 1.079127 GTGGCGCCACAGTAGTCAT 60.079 57.895 46.18 0.00 45.53 3.06
206 207 2.342279 GTGGCGCCACAGTAGTCA 59.658 61.111 46.18 14.35 45.53 3.41
230 231 2.325393 ATTACTAGTGGCTGGGGCGC 62.325 60.000 5.39 0.00 39.81 6.53
231 232 0.532862 CATTACTAGTGGCTGGGGCG 60.533 60.000 5.39 0.00 39.81 6.13
232 233 0.837272 TCATTACTAGTGGCTGGGGC 59.163 55.000 5.39 0.00 37.82 5.80
233 234 3.646162 TGTATCATTACTAGTGGCTGGGG 59.354 47.826 5.39 0.00 0.00 4.96
234 235 4.955811 TGTATCATTACTAGTGGCTGGG 57.044 45.455 5.39 0.00 0.00 4.45
235 236 5.760253 CCTTTGTATCATTACTAGTGGCTGG 59.240 44.000 5.39 0.00 0.00 4.85
236 237 5.237344 GCCTTTGTATCATTACTAGTGGCTG 59.763 44.000 5.39 0.22 34.76 4.85
237 238 5.368989 GCCTTTGTATCATTACTAGTGGCT 58.631 41.667 5.39 0.00 34.76 4.75
238 239 4.515567 GGCCTTTGTATCATTACTAGTGGC 59.484 45.833 5.39 4.76 35.72 5.01
239 240 5.680619 TGGCCTTTGTATCATTACTAGTGG 58.319 41.667 5.39 0.00 0.00 4.00
240 241 6.260936 CCTTGGCCTTTGTATCATTACTAGTG 59.739 42.308 5.39 0.00 0.00 2.74
241 242 6.357367 CCTTGGCCTTTGTATCATTACTAGT 58.643 40.000 3.32 0.00 0.00 2.57
242 243 5.765182 CCCTTGGCCTTTGTATCATTACTAG 59.235 44.000 3.32 0.00 0.00 2.57
243 244 5.192923 ACCCTTGGCCTTTGTATCATTACTA 59.807 40.000 3.32 0.00 0.00 1.82
244 245 4.017499 ACCCTTGGCCTTTGTATCATTACT 60.017 41.667 3.32 0.00 0.00 2.24
245 246 4.278310 ACCCTTGGCCTTTGTATCATTAC 58.722 43.478 3.32 0.00 0.00 1.89
246 247 4.601406 ACCCTTGGCCTTTGTATCATTA 57.399 40.909 3.32 0.00 0.00 1.90
247 248 3.473113 ACCCTTGGCCTTTGTATCATT 57.527 42.857 3.32 0.00 0.00 2.57
248 249 3.473113 AACCCTTGGCCTTTGTATCAT 57.527 42.857 3.32 0.00 0.00 2.45
249 250 2.990740 AACCCTTGGCCTTTGTATCA 57.009 45.000 3.32 0.00 0.00 2.15
250 251 3.161866 TGAAACCCTTGGCCTTTGTATC 58.838 45.455 3.32 0.00 0.00 2.24
251 252 3.252554 TGAAACCCTTGGCCTTTGTAT 57.747 42.857 3.32 0.00 0.00 2.29
252 253 2.696187 GTTGAAACCCTTGGCCTTTGTA 59.304 45.455 3.32 0.00 0.00 2.41
253 254 1.484653 GTTGAAACCCTTGGCCTTTGT 59.515 47.619 3.32 0.00 0.00 2.83
254 255 1.202639 GGTTGAAACCCTTGGCCTTTG 60.203 52.381 3.32 0.00 43.43 2.77
255 256 1.128200 GGTTGAAACCCTTGGCCTTT 58.872 50.000 3.32 0.00 43.43 3.11
256 257 2.834631 GGTTGAAACCCTTGGCCTT 58.165 52.632 3.32 0.00 43.43 4.35
257 258 4.619233 GGTTGAAACCCTTGGCCT 57.381 55.556 3.32 0.00 43.43 5.19
266 267 7.511959 ACTATCTTTTGAAGGAGGTTGAAAC 57.488 36.000 0.00 0.00 0.00 2.78
267 268 8.533569 AAACTATCTTTTGAAGGAGGTTGAAA 57.466 30.769 0.00 0.00 0.00 2.69
268 269 7.777910 TGAAACTATCTTTTGAAGGAGGTTGAA 59.222 33.333 0.57 0.00 0.00 2.69
269 270 7.287061 TGAAACTATCTTTTGAAGGAGGTTGA 58.713 34.615 0.57 0.00 0.00 3.18
270 271 7.510549 TGAAACTATCTTTTGAAGGAGGTTG 57.489 36.000 0.57 0.00 0.00 3.77
271 272 8.712228 ATTGAAACTATCTTTTGAAGGAGGTT 57.288 30.769 0.00 0.00 0.00 3.50
272 273 8.579863 CAATTGAAACTATCTTTTGAAGGAGGT 58.420 33.333 0.00 0.00 0.00 3.85
273 274 8.579863 ACAATTGAAACTATCTTTTGAAGGAGG 58.420 33.333 13.59 0.00 0.00 4.30
274 275 9.971922 AACAATTGAAACTATCTTTTGAAGGAG 57.028 29.630 13.59 0.00 0.00 3.69
349 350 9.758651 TGACGTGAGCATTAGTTGTAATATATT 57.241 29.630 0.00 2.97 0.00 1.28
350 351 9.758651 TTGACGTGAGCATTAGTTGTAATATAT 57.241 29.630 0.00 0.00 0.00 0.86
351 352 9.758651 ATTGACGTGAGCATTAGTTGTAATATA 57.241 29.630 0.00 0.00 0.00 0.86
352 353 8.662781 ATTGACGTGAGCATTAGTTGTAATAT 57.337 30.769 0.00 0.00 0.00 1.28
353 354 7.043656 CGATTGACGTGAGCATTAGTTGTAATA 60.044 37.037 0.00 0.00 37.22 0.98
354 355 6.237835 CGATTGACGTGAGCATTAGTTGTAAT 60.238 38.462 0.00 0.00 37.22 1.89
355 356 5.061684 CGATTGACGTGAGCATTAGTTGTAA 59.938 40.000 0.00 0.00 37.22 2.41
356 357 4.561213 CGATTGACGTGAGCATTAGTTGTA 59.439 41.667 0.00 0.00 37.22 2.41
357 358 3.367932 CGATTGACGTGAGCATTAGTTGT 59.632 43.478 0.00 0.00 37.22 3.32
358 359 3.782250 GCGATTGACGTGAGCATTAGTTG 60.782 47.826 0.00 0.00 44.60 3.16
359 360 2.348666 GCGATTGACGTGAGCATTAGTT 59.651 45.455 0.00 0.00 44.60 2.24
360 361 1.927174 GCGATTGACGTGAGCATTAGT 59.073 47.619 0.00 0.00 44.60 2.24
361 362 2.635141 GCGATTGACGTGAGCATTAG 57.365 50.000 0.00 0.00 44.60 1.73
371 372 3.709880 TACCCCTGCGCGATTGACG 62.710 63.158 12.10 0.00 45.66 4.35
372 373 2.171725 GTACCCCTGCGCGATTGAC 61.172 63.158 12.10 0.00 0.00 3.18
373 374 2.185867 GTACCCCTGCGCGATTGA 59.814 61.111 12.10 0.00 0.00 2.57
374 375 2.895372 GGTACCCCTGCGCGATTG 60.895 66.667 12.10 0.00 0.00 2.67
375 376 4.524318 CGGTACCCCTGCGCGATT 62.524 66.667 12.10 0.00 0.00 3.34
379 380 3.135056 CTAGACGGTACCCCTGCGC 62.135 68.421 6.25 0.00 0.00 6.09
380 381 3.117372 CTAGACGGTACCCCTGCG 58.883 66.667 6.25 0.00 0.00 5.18
381 382 0.466922 TAGCTAGACGGTACCCCTGC 60.467 60.000 6.25 9.97 0.00 4.85
382 383 2.062971 TTAGCTAGACGGTACCCCTG 57.937 55.000 6.25 0.00 0.00 4.45
383 384 2.291800 TGTTTAGCTAGACGGTACCCCT 60.292 50.000 6.25 6.51 0.00 4.79
384 385 2.100418 CTGTTTAGCTAGACGGTACCCC 59.900 54.545 13.82 0.00 0.00 4.95
385 386 2.757314 ACTGTTTAGCTAGACGGTACCC 59.243 50.000 23.57 0.00 33.78 3.69
386 387 4.914540 GTACTGTTTAGCTAGACGGTACC 58.085 47.826 35.17 24.64 45.95 3.34
388 389 3.623060 CGGTACTGTTTAGCTAGACGGTA 59.377 47.826 24.91 24.91 36.76 4.02
389 390 2.421424 CGGTACTGTTTAGCTAGACGGT 59.579 50.000 26.68 26.68 38.77 4.83
390 391 2.421424 ACGGTACTGTTTAGCTAGACGG 59.579 50.000 19.09 19.09 0.00 4.79
391 392 3.120060 ACACGGTACTGTTTAGCTAGACG 60.120 47.826 4.06 7.18 0.00 4.18
392 393 4.431661 ACACGGTACTGTTTAGCTAGAC 57.568 45.455 4.06 7.46 0.00 2.59
393 394 5.122869 CACTACACGGTACTGTTTAGCTAGA 59.877 44.000 22.43 0.00 0.00 2.43
394 395 5.330295 CACTACACGGTACTGTTTAGCTAG 58.670 45.833 22.43 12.29 0.00 3.42
395 396 4.379813 GCACTACACGGTACTGTTTAGCTA 60.380 45.833 22.43 0.00 0.00 3.32
396 397 3.613432 GCACTACACGGTACTGTTTAGCT 60.613 47.826 22.43 10.90 0.00 3.32
397 398 2.665052 GCACTACACGGTACTGTTTAGC 59.335 50.000 22.43 10.91 0.00 3.09
398 399 3.904571 TGCACTACACGGTACTGTTTAG 58.095 45.455 21.36 21.36 0.00 1.85
399 400 3.318839 ACTGCACTACACGGTACTGTTTA 59.681 43.478 4.06 2.25 0.00 2.01
400 401 2.101917 ACTGCACTACACGGTACTGTTT 59.898 45.455 4.06 0.89 0.00 2.83
401 402 1.684983 ACTGCACTACACGGTACTGTT 59.315 47.619 4.06 0.00 0.00 3.16
415 416 4.689345 ACAACCTAATTTCGTAGACTGCAC 59.311 41.667 0.00 0.00 34.32 4.57
417 418 5.857822 AACAACCTAATTTCGTAGACTGC 57.142 39.130 0.00 0.00 34.32 4.40
435 436 7.269084 CGTACTACTCGACGAAAATAGAAACAA 59.731 37.037 14.22 0.00 41.60 2.83
436 437 6.738200 CGTACTACTCGACGAAAATAGAAACA 59.262 38.462 14.22 0.00 41.60 2.83
439 440 5.063944 AGCGTACTACTCGACGAAAATAGAA 59.936 40.000 14.22 0.00 41.60 2.10
440 441 4.568359 AGCGTACTACTCGACGAAAATAGA 59.432 41.667 14.22 0.70 41.60 1.98
441 442 4.830912 AGCGTACTACTCGACGAAAATAG 58.169 43.478 0.00 4.14 41.60 1.73
442 443 4.864916 AGCGTACTACTCGACGAAAATA 57.135 40.909 0.00 0.00 41.60 1.40
443 444 3.754188 AGCGTACTACTCGACGAAAAT 57.246 42.857 0.00 0.00 41.60 1.82
449 452 2.596343 GCTTCGTAGCGTACTACTCGAC 60.596 54.545 0.00 0.00 45.63 4.20
468 471 2.709475 GAAATCGCGCGGATTGCT 59.291 55.556 31.69 13.48 44.59 3.91
489 499 5.096443 TGCTTGTTTGTCCATTTTTCCTT 57.904 34.783 0.00 0.00 0.00 3.36
491 501 4.260743 GCTTGCTTGTTTGTCCATTTTTCC 60.261 41.667 0.00 0.00 0.00 3.13
497 507 1.317613 TCGCTTGCTTGTTTGTCCAT 58.682 45.000 0.00 0.00 0.00 3.41
498 508 1.098869 TTCGCTTGCTTGTTTGTCCA 58.901 45.000 0.00 0.00 0.00 4.02
519 529 1.602377 CGAAATGGGATCGGCCTAAAC 59.398 52.381 0.00 0.00 36.68 2.01
521 531 1.124780 TCGAAATGGGATCGGCCTAA 58.875 50.000 0.00 0.00 40.59 2.69
522 532 1.275291 GATCGAAATGGGATCGGCCTA 59.725 52.381 0.00 0.00 40.59 3.93
544 554 4.391216 CACAGAGCTTGAGAAATCGATGTT 59.609 41.667 0.00 0.00 0.00 2.71
550 560 2.072298 ACGCACAGAGCTTGAGAAATC 58.928 47.619 0.00 0.00 42.61 2.17
552 562 1.502231 GACGCACAGAGCTTGAGAAA 58.498 50.000 0.00 0.00 42.61 2.52
558 574 2.698855 ATAATGGACGCACAGAGCTT 57.301 45.000 0.00 0.00 42.61 3.74
575 591 1.757118 GTGCTCTGCCCACTCACTATA 59.243 52.381 0.00 0.00 0.00 1.31
606 622 2.857483 TCTTCCAAGAATTTGTGCGGA 58.143 42.857 0.00 0.00 32.21 5.54
615 631 8.986929 TTCTTCTTTCTTCTTCTTCCAAGAAT 57.013 30.769 2.21 0.00 43.52 2.40
626 642 9.898152 TTCTTCTTCTTCTTCTTCTTTCTTCTT 57.102 29.630 0.00 0.00 0.00 2.52
627 643 9.546428 CTTCTTCTTCTTCTTCTTCTTTCTTCT 57.454 33.333 0.00 0.00 0.00 2.85
628 644 9.541143 TCTTCTTCTTCTTCTTCTTCTTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
629 645 9.898152 TTCTTCTTCTTCTTCTTCTTCTTTCTT 57.102 29.630 0.00 0.00 0.00 2.52
630 646 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTTCT 57.454 33.333 0.00 0.00 0.00 2.52
631 647 9.541143 TCTTCTTCTTCTTCTTCTTCTTCTTTC 57.459 33.333 0.00 0.00 0.00 2.62
632 648 9.898152 TTCTTCTTCTTCTTCTTCTTCTTCTTT 57.102 29.630 0.00 0.00 0.00 2.52
633 649 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
634 650 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
635 651 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
636 652 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
637 653 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
638 654 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
673 692 1.269517 GCTGCTCTCTTCCTCCGTATG 60.270 57.143 0.00 0.00 0.00 2.39
742 762 3.479269 GGTCAAGCGCCGAAGTCG 61.479 66.667 2.29 0.00 39.44 4.18
758 778 5.352284 AGAAATACTGTAGATGAAGTGCGG 58.648 41.667 0.00 0.00 0.00 5.69
799 825 3.088532 GCACCATTACTGTGGATGGAAA 58.911 45.455 23.43 0.00 44.49 3.13
807 833 1.527034 ACAGCAGCACCATTACTGTG 58.473 50.000 0.00 0.00 39.97 3.66
848 876 3.680789 GGATTCCATACTTTTCGTTGCG 58.319 45.455 0.00 0.00 0.00 4.85
851 879 3.606687 AGCGGATTCCATACTTTTCGTT 58.393 40.909 3.09 0.00 0.00 3.85
902 934 0.580104 ATTCTATTTGTACGCGCGCC 59.420 50.000 32.58 21.58 0.00 6.53
952 985 0.471591 TTGCAATGGGTTTGGGAGCT 60.472 50.000 0.00 0.00 35.75 4.09
959 992 1.047801 GGTCCTGTTGCAATGGGTTT 58.952 50.000 17.63 0.00 0.00 3.27
974 1024 2.680339 GAGTTTGCTTATGCTCAGGTCC 59.320 50.000 1.96 0.00 40.48 4.46
999 1076 3.098555 CTGTTAACCGGCGCCATC 58.901 61.111 28.98 6.42 0.00 3.51
1127 1219 1.303236 CCGAACTTGGCCATCCACA 60.303 57.895 6.09 0.00 43.33 4.17
1177 1269 4.021925 GAACACCTCCTGCCGGCT 62.022 66.667 29.70 2.62 0.00 5.52
1429 1563 2.498167 CTGGTTCTTGACTTGGGTGAG 58.502 52.381 0.00 0.00 0.00 3.51
1478 1623 1.189446 CGAACTTCGGCGTATGTATGC 59.811 52.381 6.85 0.00 36.00 3.14
1503 1703 3.062772 GCGCGCTTAAACATTTGTATTCG 60.063 43.478 26.67 0.00 0.00 3.34
1514 1754 2.693664 GCAACGTGCGCGCTTAAAC 61.694 57.895 33.29 20.66 42.83 2.01
2151 2408 5.529581 TGTAGATAAACCATGCTCGATGA 57.470 39.130 0.00 0.00 33.31 2.92
2185 2442 2.280835 CAGGCCAGACTGCTACTGA 58.719 57.895 5.01 0.00 37.54 3.41
2273 2582 6.002653 AGTCTTTGTGAACTAAACTCCCTT 57.997 37.500 0.00 0.00 0.00 3.95
2284 2593 8.988934 TGTTATTCACTGATAGTCTTTGTGAAC 58.011 33.333 8.67 0.00 46.02 3.18
2285 2594 9.725019 ATGTTATTCACTGATAGTCTTTGTGAA 57.275 29.630 8.88 8.88 46.82 3.18
2286 2595 9.725019 AATGTTATTCACTGATAGTCTTTGTGA 57.275 29.630 0.00 0.00 36.10 3.58
2337 2646 2.092323 GTAAGGCTCCGGCAGAATTTT 58.908 47.619 0.00 0.00 40.87 1.82
2380 3739 4.691216 ACAAAACTCACGAAGAATAGAGGC 59.309 41.667 0.00 0.00 32.52 4.70
2384 3743 6.423905 TGGAAGACAAAACTCACGAAGAATAG 59.576 38.462 0.00 0.00 0.00 1.73
2401 3760 4.956700 ACTTCGAATAGGAGATGGAAGACA 59.043 41.667 0.00 0.00 35.90 3.41
2407 3766 3.068732 TGCTGACTTCGAATAGGAGATGG 59.931 47.826 0.00 0.00 0.00 3.51
2416 3775 7.615582 TTCAAGATATTTGCTGACTTCGAAT 57.384 32.000 0.00 0.00 0.00 3.34
2473 3832 9.952030 TCCGAAATATTAGCATTTGACCATATA 57.048 29.630 0.00 0.00 0.00 0.86
2516 3875 0.178992 TCTTGCCAACTGAAGTGGGG 60.179 55.000 6.01 1.97 39.59 4.96
2526 3885 4.096382 CCACCATAACACTATCTTGCCAAC 59.904 45.833 0.00 0.00 0.00 3.77
2535 3894 6.235664 ACTCGTTTTTCCACCATAACACTAT 58.764 36.000 0.00 0.00 0.00 2.12
2544 3903 3.142951 CCATGTACTCGTTTTTCCACCA 58.857 45.455 0.00 0.00 0.00 4.17
2555 3914 2.492019 TGCTCGATTCCATGTACTCG 57.508 50.000 0.00 0.00 0.00 4.18
2557 3916 4.207891 AGTTTGCTCGATTCCATGTACT 57.792 40.909 0.00 0.00 0.00 2.73
2577 3936 5.224888 ACACAGAAAGCACATGCATTTTAG 58.775 37.500 6.64 0.00 45.16 1.85
2715 4075 4.873746 AGAAATTGAAGTCGTCTCTCCA 57.126 40.909 0.00 0.00 0.00 3.86
2818 4180 5.563671 GCGTCATGCTCTAGTATCTCATTCA 60.564 44.000 0.00 0.00 41.73 2.57
2829 4191 3.303605 GCACGCGTCATGCTCTAG 58.696 61.111 9.86 0.00 43.27 2.43
2834 4196 3.167945 GCAAAGCACGCGTCATGC 61.168 61.111 9.86 11.06 43.74 4.06
2835 4197 2.502510 GGCAAAGCACGCGTCATG 60.503 61.111 9.86 7.28 0.00 3.07
2836 4198 4.088762 CGGCAAAGCACGCGTCAT 62.089 61.111 9.86 0.00 0.00 3.06
2842 4204 0.303493 AATATACGCGGCAAAGCACG 59.697 50.000 12.47 0.00 36.85 5.34
2843 4205 1.597663 AGAATATACGCGGCAAAGCAC 59.402 47.619 12.47 0.00 36.85 4.40
2844 4206 1.948104 AGAATATACGCGGCAAAGCA 58.052 45.000 12.47 0.00 36.85 3.91
2845 4207 2.659291 CGAAGAATATACGCGGCAAAGC 60.659 50.000 12.47 0.00 0.00 3.51
2846 4208 2.096909 CCGAAGAATATACGCGGCAAAG 60.097 50.000 12.47 0.00 35.17 2.77
2847 4209 1.862201 CCGAAGAATATACGCGGCAAA 59.138 47.619 12.47 0.00 35.17 3.68
2848 4210 1.202440 ACCGAAGAATATACGCGGCAA 60.202 47.619 12.47 0.00 45.45 4.52
2849 4211 0.386476 ACCGAAGAATATACGCGGCA 59.614 50.000 12.47 0.00 45.45 5.69
2850 4212 1.191647 CAACCGAAGAATATACGCGGC 59.808 52.381 12.47 0.00 45.45 6.53
2851 4213 2.217847 CACAACCGAAGAATATACGCGG 59.782 50.000 12.47 0.00 46.83 6.46
2852 4214 2.217847 CCACAACCGAAGAATATACGCG 59.782 50.000 3.53 3.53 0.00 6.01
2853 4215 2.542595 CCCACAACCGAAGAATATACGC 59.457 50.000 0.00 0.00 0.00 4.42
2854 4216 3.788937 ACCCACAACCGAAGAATATACG 58.211 45.455 0.00 0.00 0.00 3.06
2855 4217 6.820152 ACTTAACCCACAACCGAAGAATATAC 59.180 38.462 0.00 0.00 0.00 1.47
2856 4218 6.949715 ACTTAACCCACAACCGAAGAATATA 58.050 36.000 0.00 0.00 0.00 0.86
2857 4219 5.812286 ACTTAACCCACAACCGAAGAATAT 58.188 37.500 0.00 0.00 0.00 1.28
2858 4220 5.231702 ACTTAACCCACAACCGAAGAATA 57.768 39.130 0.00 0.00 0.00 1.75
2859 4221 4.070009 GACTTAACCCACAACCGAAGAAT 58.930 43.478 0.00 0.00 0.00 2.40
2860 4222 3.469739 GACTTAACCCACAACCGAAGAA 58.530 45.455 0.00 0.00 0.00 2.52
2861 4223 2.224354 GGACTTAACCCACAACCGAAGA 60.224 50.000 0.00 0.00 0.00 2.87
2862 4224 2.148768 GGACTTAACCCACAACCGAAG 58.851 52.381 0.00 0.00 0.00 3.79
2863 4225 1.489649 TGGACTTAACCCACAACCGAA 59.510 47.619 0.00 0.00 0.00 4.30
2864 4226 1.129917 TGGACTTAACCCACAACCGA 58.870 50.000 0.00 0.00 0.00 4.69
2865 4227 3.709974 TGGACTTAACCCACAACCG 57.290 52.632 0.00 0.00 0.00 4.44
2871 4233 8.798402 CAAAATAAACATAGTGGACTTAACCCA 58.202 33.333 0.00 0.00 0.00 4.51
2872 4234 8.799367 ACAAAATAAACATAGTGGACTTAACCC 58.201 33.333 0.00 0.00 0.00 4.11
2873 4235 9.620660 CACAAAATAAACATAGTGGACTTAACC 57.379 33.333 0.00 0.00 0.00 2.85
2876 4238 8.293867 GCACACAAAATAAACATAGTGGACTTA 58.706 33.333 0.00 0.00 0.00 2.24
2877 4239 7.145323 GCACACAAAATAAACATAGTGGACTT 58.855 34.615 0.00 0.00 0.00 3.01
2878 4240 6.264292 TGCACACAAAATAAACATAGTGGACT 59.736 34.615 0.00 0.00 0.00 3.85
2879 4241 6.442952 TGCACACAAAATAAACATAGTGGAC 58.557 36.000 0.00 0.00 0.00 4.02
2880 4242 6.264292 ACTGCACACAAAATAAACATAGTGGA 59.736 34.615 0.00 0.00 0.00 4.02
2881 4243 6.446318 ACTGCACACAAAATAAACATAGTGG 58.554 36.000 0.00 0.00 0.00 4.00
2882 4244 7.362662 AGACTGCACACAAAATAAACATAGTG 58.637 34.615 0.00 0.00 0.00 2.74
2883 4245 7.510549 AGACTGCACACAAAATAAACATAGT 57.489 32.000 0.00 0.00 0.00 2.12
2886 4248 9.410556 GAAATAGACTGCACACAAAATAAACAT 57.589 29.630 0.00 0.00 0.00 2.71
2887 4249 8.409371 TGAAATAGACTGCACACAAAATAAACA 58.591 29.630 0.00 0.00 0.00 2.83
2888 4250 8.795786 TGAAATAGACTGCACACAAAATAAAC 57.204 30.769 0.00 0.00 0.00 2.01
2889 4251 9.979578 ATTGAAATAGACTGCACACAAAATAAA 57.020 25.926 0.00 0.00 0.00 1.40
2890 4252 9.979578 AATTGAAATAGACTGCACACAAAATAA 57.020 25.926 0.00 0.00 0.00 1.40
2891 4253 9.409312 CAATTGAAATAGACTGCACACAAAATA 57.591 29.630 0.00 0.00 0.00 1.40
2892 4254 7.385752 CCAATTGAAATAGACTGCACACAAAAT 59.614 33.333 7.12 0.00 0.00 1.82
2893 4255 6.700960 CCAATTGAAATAGACTGCACACAAAA 59.299 34.615 7.12 0.00 0.00 2.44
2894 4256 6.183360 ACCAATTGAAATAGACTGCACACAAA 60.183 34.615 7.12 0.00 0.00 2.83
2895 4257 5.301551 ACCAATTGAAATAGACTGCACACAA 59.698 36.000 7.12 0.00 0.00 3.33
2896 4258 4.826733 ACCAATTGAAATAGACTGCACACA 59.173 37.500 7.12 0.00 0.00 3.72
2897 4259 5.376854 ACCAATTGAAATAGACTGCACAC 57.623 39.130 7.12 0.00 0.00 3.82
2898 4260 5.301551 ACAACCAATTGAAATAGACTGCACA 59.698 36.000 7.12 0.00 39.30 4.57
2899 4261 5.772521 ACAACCAATTGAAATAGACTGCAC 58.227 37.500 7.12 0.00 39.30 4.57
2900 4262 5.048083 GGACAACCAATTGAAATAGACTGCA 60.048 40.000 7.12 0.00 39.30 4.41
2901 4263 5.183904 AGGACAACCAATTGAAATAGACTGC 59.816 40.000 7.12 0.00 39.30 4.40
2902 4264 6.207417 ACAGGACAACCAATTGAAATAGACTG 59.793 38.462 7.12 9.22 39.30 3.51
2903 4265 6.306987 ACAGGACAACCAATTGAAATAGACT 58.693 36.000 7.12 0.00 39.30 3.24
2904 4266 6.575162 ACAGGACAACCAATTGAAATAGAC 57.425 37.500 7.12 0.00 39.30 2.59
2905 4267 6.549364 ACAACAGGACAACCAATTGAAATAGA 59.451 34.615 7.12 0.00 39.30 1.98
2906 4268 6.642131 CACAACAGGACAACCAATTGAAATAG 59.358 38.462 7.12 0.00 39.30 1.73
2907 4269 6.097554 ACACAACAGGACAACCAATTGAAATA 59.902 34.615 7.12 0.00 39.30 1.40
2908 4270 5.104982 ACACAACAGGACAACCAATTGAAAT 60.105 36.000 7.12 0.00 39.30 2.17
2909 4271 4.221703 ACACAACAGGACAACCAATTGAAA 59.778 37.500 7.12 0.00 39.30 2.69
2910 4272 3.766591 ACACAACAGGACAACCAATTGAA 59.233 39.130 7.12 0.00 39.30 2.69
2911 4273 3.360867 ACACAACAGGACAACCAATTGA 58.639 40.909 7.12 0.00 39.30 2.57
2912 4274 3.799281 ACACAACAGGACAACCAATTG 57.201 42.857 0.00 0.00 41.98 2.32
2913 4275 7.775053 ATTATACACAACAGGACAACCAATT 57.225 32.000 0.00 0.00 38.94 2.32
2914 4276 7.232534 ACAATTATACACAACAGGACAACCAAT 59.767 33.333 0.00 0.00 38.94 3.16
2915 4277 6.547880 ACAATTATACACAACAGGACAACCAA 59.452 34.615 0.00 0.00 38.94 3.67
2916 4278 6.065374 ACAATTATACACAACAGGACAACCA 58.935 36.000 0.00 0.00 38.94 3.67
2917 4279 6.569179 ACAATTATACACAACAGGACAACC 57.431 37.500 0.00 0.00 0.00 3.77
2918 4280 6.146510 TCGACAATTATACACAACAGGACAAC 59.853 38.462 0.00 0.00 0.00 3.32
2919 4281 6.224584 TCGACAATTATACACAACAGGACAA 58.775 36.000 0.00 0.00 0.00 3.18
2920 4282 5.785243 TCGACAATTATACACAACAGGACA 58.215 37.500 0.00 0.00 0.00 4.02
2921 4283 6.903883 ATCGACAATTATACACAACAGGAC 57.096 37.500 0.00 0.00 0.00 3.85
2922 4284 8.255206 ACTAATCGACAATTATACACAACAGGA 58.745 33.333 0.00 0.00 0.00 3.86
2923 4285 8.420374 ACTAATCGACAATTATACACAACAGG 57.580 34.615 0.00 0.00 0.00 4.00
2924 4286 9.689075 CAACTAATCGACAATTATACACAACAG 57.311 33.333 0.00 0.00 0.00 3.16
2925 4287 9.210329 ACAACTAATCGACAATTATACACAACA 57.790 29.630 0.00 0.00 0.00 3.33
2926 4288 9.472995 CACAACTAATCGACAATTATACACAAC 57.527 33.333 0.00 0.00 0.00 3.32
2927 4289 8.172484 GCACAACTAATCGACAATTATACACAA 58.828 33.333 0.00 0.00 0.00 3.33
2928 4290 7.547722 AGCACAACTAATCGACAATTATACACA 59.452 33.333 0.00 0.00 0.00 3.72
2929 4291 7.906160 AGCACAACTAATCGACAATTATACAC 58.094 34.615 0.00 0.00 0.00 2.90
2930 4292 9.758651 ATAGCACAACTAATCGACAATTATACA 57.241 29.630 0.00 0.00 33.57 2.29
2950 4312 7.172190 AACATGATTGTCACTGCTATATAGCAC 59.828 37.037 29.44 20.81 44.13 4.40
2951 4313 7.219322 AACATGATTGTCACTGCTATATAGCA 58.781 34.615 30.54 30.54 45.60 3.49
2952 4314 7.664082 AACATGATTGTCACTGCTATATAGC 57.336 36.000 25.06 25.06 41.69 2.97
2956 4318 9.225436 TGTTTAAACATGATTGTCACTGCTATA 57.775 29.630 17.01 0.00 34.06 1.31
2957 4319 8.109705 TGTTTAAACATGATTGTCACTGCTAT 57.890 30.769 17.01 0.00 34.06 2.97
2958 4320 7.503521 TGTTTAAACATGATTGTCACTGCTA 57.496 32.000 17.01 0.00 34.06 3.49
2959 4321 6.389830 TGTTTAAACATGATTGTCACTGCT 57.610 33.333 17.01 0.00 34.06 4.24
2993 4355 9.244292 TGTTCATTAGTTCACTAGACTGATACT 57.756 33.333 0.00 0.93 0.00 2.12
2994 4356 9.856488 TTGTTCATTAGTTCACTAGACTGATAC 57.144 33.333 0.00 0.00 0.00 2.24
2996 4358 9.950496 AATTGTTCATTAGTTCACTAGACTGAT 57.050 29.630 0.00 0.00 0.00 2.90
2997 4359 9.208022 CAATTGTTCATTAGTTCACTAGACTGA 57.792 33.333 0.00 0.00 0.00 3.41
2998 4360 8.993121 ACAATTGTTCATTAGTTCACTAGACTG 58.007 33.333 4.92 0.00 0.00 3.51
2999 4361 9.561069 AACAATTGTTCATTAGTTCACTAGACT 57.439 29.630 18.13 0.00 31.64 3.24
3000 4362 9.599322 CAACAATTGTTCATTAGTTCACTAGAC 57.401 33.333 20.85 0.00 35.83 2.59
3001 4363 9.337396 ACAACAATTGTTCATTAGTTCACTAGA 57.663 29.630 20.85 0.00 42.22 2.43
3002 4364 9.385902 CACAACAATTGTTCATTAGTTCACTAG 57.614 33.333 20.85 7.32 43.23 2.57
3003 4365 8.898761 ACACAACAATTGTTCATTAGTTCACTA 58.101 29.630 20.85 0.00 43.23 2.74
3004 4366 7.701924 CACACAACAATTGTTCATTAGTTCACT 59.298 33.333 20.85 0.00 43.23 3.41
3005 4367 7.700234 TCACACAACAATTGTTCATTAGTTCAC 59.300 33.333 20.85 0.00 43.23 3.18
3006 4368 7.766283 TCACACAACAATTGTTCATTAGTTCA 58.234 30.769 20.85 0.08 43.23 3.18
3007 4369 7.096477 GCTCACACAACAATTGTTCATTAGTTC 60.096 37.037 20.85 4.20 43.23 3.01
3008 4370 6.697019 GCTCACACAACAATTGTTCATTAGTT 59.303 34.615 20.85 4.72 43.23 2.24
3009 4371 6.039717 AGCTCACACAACAATTGTTCATTAGT 59.960 34.615 20.85 12.48 43.23 2.24
3010 4372 6.441274 AGCTCACACAACAATTGTTCATTAG 58.559 36.000 20.85 14.60 43.23 1.73
3011 4373 6.389830 AGCTCACACAACAATTGTTCATTA 57.610 33.333 20.85 5.47 43.23 1.90
3012 4374 5.266733 AGCTCACACAACAATTGTTCATT 57.733 34.783 20.85 5.87 43.23 2.57
3013 4375 4.924305 AGCTCACACAACAATTGTTCAT 57.076 36.364 20.85 9.62 43.23 2.57
3014 4376 4.671377 GAAGCTCACACAACAATTGTTCA 58.329 39.130 20.85 2.62 43.23 3.18
3015 4377 3.725740 CGAAGCTCACACAACAATTGTTC 59.274 43.478 20.85 8.19 43.23 3.18
3016 4378 3.128589 ACGAAGCTCACACAACAATTGTT 59.871 39.130 18.13 18.13 43.23 2.83
3017 4379 2.682856 ACGAAGCTCACACAACAATTGT 59.317 40.909 4.92 4.92 46.75 2.71
3018 4380 3.338818 ACGAAGCTCACACAACAATTG 57.661 42.857 3.24 3.24 0.00 2.32
3019 4381 3.546020 CGAACGAAGCTCACACAACAATT 60.546 43.478 0.00 0.00 0.00 2.32
3020 4382 2.032894 CGAACGAAGCTCACACAACAAT 60.033 45.455 0.00 0.00 0.00 2.71
3021 4383 1.326245 CGAACGAAGCTCACACAACAA 59.674 47.619 0.00 0.00 0.00 2.83
3022 4384 0.927537 CGAACGAAGCTCACACAACA 59.072 50.000 0.00 0.00 0.00 3.33
3023 4385 1.205657 TCGAACGAAGCTCACACAAC 58.794 50.000 0.00 0.00 0.00 3.32
3024 4386 2.148916 ATCGAACGAAGCTCACACAA 57.851 45.000 0.12 0.00 0.00 3.33
3025 4387 2.030628 TGTATCGAACGAAGCTCACACA 60.031 45.455 0.12 0.00 0.00 3.72
3026 4388 2.341760 GTGTATCGAACGAAGCTCACAC 59.658 50.000 0.12 7.16 0.00 3.82
3027 4389 2.592194 GTGTATCGAACGAAGCTCACA 58.408 47.619 0.12 0.00 0.00 3.58
3028 4390 1.918609 GGTGTATCGAACGAAGCTCAC 59.081 52.381 0.12 8.03 0.00 3.51
3029 4391 1.135199 GGGTGTATCGAACGAAGCTCA 60.135 52.381 0.12 0.00 0.00 4.26
3030 4392 1.557651 GGGTGTATCGAACGAAGCTC 58.442 55.000 0.12 0.00 0.00 4.09
3031 4393 0.179145 CGGGTGTATCGAACGAAGCT 60.179 55.000 0.12 0.00 0.00 3.74
3032 4394 0.179156 TCGGGTGTATCGAACGAAGC 60.179 55.000 0.12 0.00 33.42 3.86
3033 4395 1.823828 CTCGGGTGTATCGAACGAAG 58.176 55.000 0.12 0.00 36.15 3.79
3034 4396 0.179156 GCTCGGGTGTATCGAACGAA 60.179 55.000 0.12 0.00 36.15 3.85
3035 4397 1.028330 AGCTCGGGTGTATCGAACGA 61.028 55.000 0.00 0.00 36.15 3.85
3036 4398 0.179145 AAGCTCGGGTGTATCGAACG 60.179 55.000 0.00 0.00 36.15 3.95
3037 4399 2.857592 TAAGCTCGGGTGTATCGAAC 57.142 50.000 0.00 0.00 36.15 3.95
3038 4400 4.395959 AATTAAGCTCGGGTGTATCGAA 57.604 40.909 0.00 0.00 36.15 3.71
3039 4401 4.098960 AGAAATTAAGCTCGGGTGTATCGA 59.901 41.667 0.00 0.00 35.24 3.59
3040 4402 4.369182 AGAAATTAAGCTCGGGTGTATCG 58.631 43.478 0.00 0.00 0.00 2.92
3041 4403 5.504173 GCAAGAAATTAAGCTCGGGTGTATC 60.504 44.000 0.00 0.00 0.00 2.24
3042 4404 4.335594 GCAAGAAATTAAGCTCGGGTGTAT 59.664 41.667 0.00 0.00 0.00 2.29
3043 4405 3.687698 GCAAGAAATTAAGCTCGGGTGTA 59.312 43.478 0.00 0.00 0.00 2.90
3044 4406 2.488153 GCAAGAAATTAAGCTCGGGTGT 59.512 45.455 0.00 0.00 0.00 4.16
3045 4407 2.749621 AGCAAGAAATTAAGCTCGGGTG 59.250 45.455 0.00 0.00 30.05 4.61
3046 4408 3.010420 GAGCAAGAAATTAAGCTCGGGT 58.990 45.455 0.00 0.00 43.27 5.28
3047 4409 3.682372 GAGCAAGAAATTAAGCTCGGG 57.318 47.619 0.00 0.00 43.27 5.14
3051 4413 5.990120 ACCATTGAGCAAGAAATTAAGCT 57.010 34.783 0.00 0.00 40.60 3.74
3052 4414 8.707938 AATAACCATTGAGCAAGAAATTAAGC 57.292 30.769 0.00 0.00 0.00 3.09
3056 4418 7.754924 CGTGTAATAACCATTGAGCAAGAAATT 59.245 33.333 0.00 0.00 0.00 1.82
3057 4419 7.250569 CGTGTAATAACCATTGAGCAAGAAAT 58.749 34.615 0.00 0.00 0.00 2.17
3058 4420 6.348950 CCGTGTAATAACCATTGAGCAAGAAA 60.349 38.462 0.00 0.00 0.00 2.52
3059 4421 5.123186 CCGTGTAATAACCATTGAGCAAGAA 59.877 40.000 0.00 0.00 0.00 2.52
3060 4422 4.634004 CCGTGTAATAACCATTGAGCAAGA 59.366 41.667 0.00 0.00 0.00 3.02
3061 4423 4.634004 TCCGTGTAATAACCATTGAGCAAG 59.366 41.667 0.00 0.00 0.00 4.01
3062 4424 4.580868 TCCGTGTAATAACCATTGAGCAA 58.419 39.130 0.00 0.00 0.00 3.91
3063 4425 4.209307 TCCGTGTAATAACCATTGAGCA 57.791 40.909 0.00 0.00 0.00 4.26
3064 4426 5.751243 ATTCCGTGTAATAACCATTGAGC 57.249 39.130 0.00 0.00 0.00 4.26
3077 4439 9.893634 TCTTCCATTTTTCTAATATTCCGTGTA 57.106 29.630 0.00 0.00 0.00 2.90
3078 4440 8.801882 TCTTCCATTTTTCTAATATTCCGTGT 57.198 30.769 0.00 0.00 0.00 4.49
3093 4455 9.547279 AGGTTTACCATTCTATTCTTCCATTTT 57.453 29.630 1.13 0.00 38.89 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.