Multiple sequence alignment - TraesCS5A01G163700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G163700 chr5A 100.000 6317 0 0 1 6317 350544162 350537846 0.000000e+00 11666.0
1 TraesCS5A01G163700 chr5A 100.000 353 0 0 6579 6931 350537584 350537232 0.000000e+00 652.0
2 TraesCS5A01G163700 chr5A 96.581 117 3 1 785 901 664552913 664553028 7.090000e-45 193.0
3 TraesCS5A01G163700 chr3B 94.252 2279 68 25 899 3128 445888370 445886106 0.000000e+00 3424.0
4 TraesCS5A01G163700 chr3B 94.027 1423 64 7 4566 5982 445884133 445882726 0.000000e+00 2137.0
5 TraesCS5A01G163700 chr3B 94.625 1079 46 7 3127 4201 445886034 445884964 0.000000e+00 1661.0
6 TraesCS5A01G163700 chr3B 94.395 785 32 5 1 783 445889131 445888357 0.000000e+00 1195.0
7 TraesCS5A01G163700 chr3B 96.053 304 8 2 4193 4494 445884800 445884499 6.250000e-135 492.0
8 TraesCS5A01G163700 chr3B 95.041 121 3 3 785 904 689513954 689514072 3.300000e-43 187.0
9 TraesCS5A01G163700 chr3B 89.362 141 12 1 5983 6120 445882658 445882518 2.570000e-39 174.0
10 TraesCS5A01G163700 chr5D 88.616 2284 155 48 899 3128 264496761 264494529 0.000000e+00 2680.0
11 TraesCS5A01G163700 chr5D 92.757 1574 82 9 4585 6154 264492540 264490995 0.000000e+00 2246.0
12 TraesCS5A01G163700 chr5D 90.278 936 68 10 3138 4064 264494438 264493517 0.000000e+00 1203.0
13 TraesCS5A01G163700 chr5D 88.760 516 40 9 23 528 264497560 264497053 3.550000e-172 616.0
14 TraesCS5A01G163700 chr5D 92.916 367 23 3 4062 4426 264493422 264493057 1.320000e-146 531.0
15 TraesCS5A01G163700 chr5D 87.387 333 31 7 6607 6931 264376353 264376024 8.490000e-99 372.0
16 TraesCS5A01G163700 chr5D 95.954 173 7 0 6145 6317 264490033 264489861 1.470000e-71 281.0
17 TraesCS5A01G163700 chr5D 97.436 117 2 1 785 901 225256304 225256189 1.520000e-46 198.0
18 TraesCS5A01G163700 chr5D 90.179 112 8 2 4424 4532 264492976 264492865 7.250000e-30 143.0
19 TraesCS5A01G163700 chr4A 79.683 1137 194 21 4814 5932 673070397 673071514 0.000000e+00 785.0
20 TraesCS5A01G163700 chr4A 96.639 119 3 1 785 903 657204791 657204674 5.480000e-46 196.0
21 TraesCS5A01G163700 chr4A 95.833 120 3 2 785 904 673447959 673447842 7.090000e-45 193.0
22 TraesCS5A01G163700 chr4A 82.143 224 30 8 2255 2475 614522169 614521953 4.270000e-42 183.0
23 TraesCS5A01G163700 chr7D 79.256 1075 190 18 4871 5932 56400613 56401667 0.000000e+00 719.0
24 TraesCS5A01G163700 chr7D 90.566 106 10 0 3665 3770 56400291 56400396 2.610000e-29 141.0
25 TraesCS5A01G163700 chr5B 95.902 122 4 1 785 906 512980828 512980708 5.480000e-46 196.0
26 TraesCS5A01G163700 chr5B 95.122 123 4 2 785 907 243411085 243411205 7.090000e-45 193.0
27 TraesCS5A01G163700 chr5B 100.000 29 0 0 6579 6607 670831506 670831534 3.000000e-03 54.7
28 TraesCS5A01G163700 chr3D 81.780 236 33 8 2243 2475 45495006 45494778 9.180000e-44 189.0
29 TraesCS5A01G163700 chr1B 93.651 126 6 2 785 910 476332745 476332868 3.300000e-43 187.0
30 TraesCS5A01G163700 chr4B 90.647 139 8 5 785 921 295687786 295687651 5.520000e-41 180.0
31 TraesCS5A01G163700 chr7A 80.508 236 36 8 2243 2475 672452956 672453184 9.240000e-39 172.0
32 TraesCS5A01G163700 chr6A 81.166 223 34 6 2255 2475 60156319 60156103 9.240000e-39 172.0
33 TraesCS5A01G163700 chr6A 81.538 195 24 8 2284 2475 70935847 70935662 4.330000e-32 150.0
34 TraesCS5A01G163700 chr2A 80.000 240 38 8 2239 2475 758294037 758293805 1.200000e-37 169.0
35 TraesCS5A01G163700 chr2A 100.000 28 0 0 6580 6607 744282291 744282264 1.300000e-02 52.8
36 TraesCS5A01G163700 chr6D 79.661 236 36 9 2243 2475 56296355 56296129 7.200000e-35 159.0
37 TraesCS5A01G163700 chr1A 84.874 119 18 0 5031 5149 70657550 70657668 3.400000e-23 121.0
38 TraesCS5A01G163700 chr7B 100.000 29 0 0 6579 6607 727632983 727632955 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G163700 chr5A 350537232 350544162 6930 True 6159.000000 11666 100.000000 1 6931 2 chr5A.!!$R1 6930
1 TraesCS5A01G163700 chr3B 445882518 445889131 6613 True 1513.833333 3424 93.785667 1 6120 6 chr3B.!!$R1 6119
2 TraesCS5A01G163700 chr5D 264489861 264497560 7699 True 1100.000000 2680 91.351429 23 6317 7 chr5D.!!$R3 6294
3 TraesCS5A01G163700 chr4A 673070397 673071514 1117 False 785.000000 785 79.683000 4814 5932 1 chr4A.!!$F1 1118
4 TraesCS5A01G163700 chr7D 56400291 56401667 1376 False 430.000000 719 84.911000 3665 5932 2 chr7D.!!$F1 2267

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
831 903 0.177141 GGCTGCGTACAATAGACCCA 59.823 55.000 0.00 0.00 0.00 4.51 F
848 920 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46 F
849 921 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46 F
2075 2169 0.877071 ATGTTTGCCTTCTGAGTGCG 59.123 50.000 0.00 0.00 0.00 5.34 F
2158 2252 3.771479 ACCACTGAATATGTCTGAGCTCA 59.229 43.478 17.19 17.19 0.00 4.26 F
3022 3167 3.572682 ACGAGTATGTTCTGTCCAGTGAA 59.427 43.478 0.00 0.00 0.00 3.18 F
4461 5075 1.419374 CACTTGTAGCGTGAGACACC 58.581 55.000 0.00 0.00 34.35 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2056 2150 0.877071 CGCACTCAGAAGGCAAACAT 59.123 50.000 0.00 0.00 0.00 2.71 R
2350 2448 2.308570 TCACTACAATTGTCAGGCCCAT 59.691 45.455 15.85 0.00 0.00 4.00 R
2442 2540 6.705863 AATTTCTCCAAGGATAACATGAGC 57.294 37.500 0.00 0.00 0.00 4.26 R
2905 3050 3.634910 TGGCAACCTGTTAAAGACTTTCC 59.365 43.478 3.07 0.00 0.00 3.13 R
3626 3860 3.743521 ACAATGACACAGCATACACACT 58.256 40.909 0.00 0.00 0.00 3.55 R
4501 5115 0.519519 TCCAACAGCGTAATTTGCGG 59.480 50.000 8.93 3.31 37.44 5.69 R
6274 8244 1.268845 GGCGGTGCAAATTATAACCCG 60.269 52.381 2.52 2.52 37.08 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 77 0.321919 TGGCTGCACAGAATCTGACC 60.322 55.000 18.20 10.05 35.18 4.02
84 85 3.808618 GCACAGAATCTGACCCTGTCTTT 60.809 47.826 18.20 0.00 38.93 2.52
87 88 2.573915 AGAATCTGACCCTGTCTTTCCC 59.426 50.000 0.00 0.00 33.15 3.97
122 124 5.652452 AGTTTGGAGCTGTAGACAAAGTTTT 59.348 36.000 0.00 0.00 33.94 2.43
152 154 1.480954 TCGGATCAAGGCTGAGGTAAC 59.519 52.381 0.00 0.00 34.23 2.50
207 209 4.060205 ACATGGTCACGGTTTAAGTACAC 58.940 43.478 0.00 0.00 0.00 2.90
208 210 2.741612 TGGTCACGGTTTAAGTACACG 58.258 47.619 0.00 0.00 0.00 4.49
209 211 1.456923 GGTCACGGTTTAAGTACACGC 59.543 52.381 0.00 0.00 0.00 5.34
210 212 1.123038 GTCACGGTTTAAGTACACGCG 59.877 52.381 3.53 3.53 0.00 6.01
361 369 8.188799 ACAACAGAATTTGAATCATAGCTCATG 58.811 33.333 0.00 0.00 35.81 3.07
416 425 2.309528 TCCGAACTCAATCCCATTCG 57.690 50.000 0.00 0.00 42.71 3.34
427 437 5.445069 TCAATCCCATTCGTGTATCCAAAT 58.555 37.500 0.00 0.00 0.00 2.32
463 473 1.403249 GGCATCGTCAAATTGCAAGCT 60.403 47.619 4.94 0.00 38.12 3.74
528 540 1.951209 TCCTTCCTGGTATGCAGTGA 58.049 50.000 0.00 0.00 37.07 3.41
532 598 2.988010 TCCTGGTATGCAGTGACATC 57.012 50.000 0.00 0.00 0.00 3.06
602 674 0.474660 AACTCCCTTCTGACAGCCCT 60.475 55.000 0.00 0.00 0.00 5.19
653 725 3.934391 CTTCGTCTCCGGTGGTGGC 62.934 68.421 0.00 0.00 33.95 5.01
698 770 2.833913 CCCAGGAACCACTGCCACT 61.834 63.158 0.00 0.00 37.16 4.00
721 793 2.502492 CCCGATCGACCTCTGCCAT 61.502 63.158 18.66 0.00 0.00 4.40
725 797 1.074926 ATCGACCTCTGCCATCCCT 60.075 57.895 0.00 0.00 0.00 4.20
727 799 2.914289 GACCTCTGCCATCCCTGG 59.086 66.667 0.00 0.00 46.17 4.45
776 848 4.342092 CCCATTTCTTGTCCACTTTGTTCT 59.658 41.667 0.00 0.00 0.00 3.01
777 849 5.284079 CCATTTCTTGTCCACTTTGTTCTG 58.716 41.667 0.00 0.00 0.00 3.02
778 850 5.163519 CCATTTCTTGTCCACTTTGTTCTGT 60.164 40.000 0.00 0.00 0.00 3.41
779 851 5.975693 TTTCTTGTCCACTTTGTTCTGTT 57.024 34.783 0.00 0.00 0.00 3.16
780 852 4.963276 TCTTGTCCACTTTGTTCTGTTG 57.037 40.909 0.00 0.00 0.00 3.33
781 853 3.128589 TCTTGTCCACTTTGTTCTGTTGC 59.871 43.478 0.00 0.00 0.00 4.17
782 854 2.722094 TGTCCACTTTGTTCTGTTGCT 58.278 42.857 0.00 0.00 0.00 3.91
783 855 3.088532 TGTCCACTTTGTTCTGTTGCTT 58.911 40.909 0.00 0.00 0.00 3.91
784 856 4.265893 TGTCCACTTTGTTCTGTTGCTTA 58.734 39.130 0.00 0.00 0.00 3.09
785 857 4.702612 TGTCCACTTTGTTCTGTTGCTTAA 59.297 37.500 0.00 0.00 0.00 1.85
786 858 5.034797 GTCCACTTTGTTCTGTTGCTTAAC 58.965 41.667 0.00 0.00 0.00 2.01
787 859 4.702612 TCCACTTTGTTCTGTTGCTTAACA 59.297 37.500 0.00 0.00 0.00 2.41
796 868 4.670227 CTGTTGCTTAACAGCCTCTTAC 57.330 45.455 7.18 0.00 46.74 2.34
797 869 4.319177 CTGTTGCTTAACAGCCTCTTACT 58.681 43.478 7.18 0.00 46.74 2.24
798 870 4.065088 TGTTGCTTAACAGCCTCTTACTG 58.935 43.478 0.00 0.00 46.74 2.74
799 871 4.202315 TGTTGCTTAACAGCCTCTTACTGA 60.202 41.667 0.00 0.00 46.74 3.41
800 872 4.617253 TGCTTAACAGCCTCTTACTGAA 57.383 40.909 0.00 0.00 46.74 3.02
801 873 4.968259 TGCTTAACAGCCTCTTACTGAAA 58.032 39.130 0.00 0.00 46.74 2.69
802 874 5.560724 TGCTTAACAGCCTCTTACTGAAAT 58.439 37.500 0.00 0.00 46.74 2.17
803 875 5.412594 TGCTTAACAGCCTCTTACTGAAATG 59.587 40.000 0.00 0.00 46.74 2.32
804 876 5.412904 GCTTAACAGCCTCTTACTGAAATGT 59.587 40.000 0.00 0.00 40.61 2.71
805 877 6.594159 GCTTAACAGCCTCTTACTGAAATGTA 59.406 38.462 0.00 0.00 40.61 2.29
806 878 7.201565 GCTTAACAGCCTCTTACTGAAATGTAG 60.202 40.741 0.00 0.00 40.61 2.74
807 879 5.091261 ACAGCCTCTTACTGAAATGTAGG 57.909 43.478 0.00 0.00 38.55 3.18
808 880 4.080863 ACAGCCTCTTACTGAAATGTAGGG 60.081 45.833 0.00 0.00 38.55 3.53
809 881 4.162320 CAGCCTCTTACTGAAATGTAGGGA 59.838 45.833 0.00 0.00 37.32 4.20
810 882 4.783227 AGCCTCTTACTGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
811 883 5.250774 AGCCTCTTACTGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
812 884 5.586643 GCCTCTTACTGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
813 885 6.116126 CCTCTTACTGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
814 886 5.497474 TCTTACTGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
815 887 5.250774 TCTTACTGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
816 888 3.690460 ACTGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
817 889 2.424956 CTGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
818 890 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
819 891 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
820 892 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
821 893 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
822 894 0.248289 GTAGGGAAAGGCTGCGTACA 59.752 55.000 0.00 0.00 36.89 2.90
823 895 0.978151 TAGGGAAAGGCTGCGTACAA 59.022 50.000 0.00 0.00 0.00 2.41
824 896 0.328258 AGGGAAAGGCTGCGTACAAT 59.672 50.000 0.00 0.00 0.00 2.71
825 897 1.557832 AGGGAAAGGCTGCGTACAATA 59.442 47.619 0.00 0.00 0.00 1.90
826 898 1.940613 GGGAAAGGCTGCGTACAATAG 59.059 52.381 0.00 0.00 0.00 1.73
827 899 2.419574 GGGAAAGGCTGCGTACAATAGA 60.420 50.000 0.00 0.00 0.00 1.98
828 900 2.608090 GGAAAGGCTGCGTACAATAGAC 59.392 50.000 0.00 0.00 0.00 2.59
829 901 2.311124 AAGGCTGCGTACAATAGACC 57.689 50.000 0.00 0.00 0.00 3.85
830 902 0.464452 AGGCTGCGTACAATAGACCC 59.536 55.000 0.00 0.00 0.00 4.46
831 903 0.177141 GGCTGCGTACAATAGACCCA 59.823 55.000 0.00 0.00 0.00 4.51
832 904 1.406341 GGCTGCGTACAATAGACCCAA 60.406 52.381 0.00 0.00 0.00 4.12
833 905 2.352388 GCTGCGTACAATAGACCCAAA 58.648 47.619 0.00 0.00 0.00 3.28
834 906 2.351726 GCTGCGTACAATAGACCCAAAG 59.648 50.000 0.00 0.00 0.00 2.77
835 907 3.596214 CTGCGTACAATAGACCCAAAGT 58.404 45.455 0.00 0.00 0.00 2.66
836 908 3.331150 TGCGTACAATAGACCCAAAGTG 58.669 45.455 0.00 0.00 0.00 3.16
837 909 2.676342 GCGTACAATAGACCCAAAGTGG 59.324 50.000 0.00 0.00 37.25 4.00
838 910 3.867216 GCGTACAATAGACCCAAAGTGGT 60.867 47.826 0.00 0.00 42.79 4.16
843 915 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
844 916 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
845 917 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
846 918 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
847 919 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
848 920 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
849 921 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
850 922 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
851 923 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
858 930 4.735599 GACCCTTCCCCGGACCCT 62.736 72.222 0.73 0.00 0.00 4.34
886 958 4.162690 GGAGCTACCTGCACCGGG 62.163 72.222 6.32 0.00 42.21 5.73
887 959 4.840005 GAGCTACCTGCACCGGGC 62.840 72.222 6.32 7.25 45.94 6.13
897 969 2.917227 CACCGGGCTGCCCTTTTT 60.917 61.111 33.39 13.23 42.67 1.94
967 1039 7.517614 TTGCCTTACAAAATCATGAGTTGTA 57.482 32.000 22.02 22.02 36.83 2.41
1107 1179 8.057742 GCTCTTGTCAATTTTGTTGTTATTGTG 58.942 33.333 0.00 0.00 32.49 3.33
1120 1192 8.586570 TGTTGTTATTGTGGTTTCATTGATTC 57.413 30.769 0.00 0.00 0.00 2.52
1131 1203 8.542953 GTGGTTTCATTGATTCTTTTTGTCTTC 58.457 33.333 0.00 0.00 0.00 2.87
1258 1334 8.610035 GGTACATTTTAGTACTGTTAGGAATGC 58.390 37.037 5.39 0.00 43.01 3.56
1260 1336 8.268850 ACATTTTAGTACTGTTAGGAATGCTG 57.731 34.615 5.39 0.00 0.00 4.41
1359 1438 2.029918 GCAGGTTTGAGGGTTGCTTTAG 60.030 50.000 0.00 0.00 0.00 1.85
1388 1467 1.003118 TGATGTACCTGGAACTGCACC 59.997 52.381 0.00 0.00 0.00 5.01
1420 1499 7.374272 TGTTCTTAGATCTCAACTCTGTTGAG 58.626 38.462 25.70 25.70 45.38 3.02
1504 1593 8.956426 TCAATTCATACAGTTCAATAACCTTCC 58.044 33.333 0.00 0.00 36.15 3.46
1517 1606 7.046033 TCAATAACCTTCCGGATTCTAGTTTC 58.954 38.462 4.15 0.00 0.00 2.78
1658 1750 2.027192 GTGGATTACCCTGAGAACTGCA 60.027 50.000 0.00 0.00 35.38 4.41
1684 1776 6.104439 TCTACGTTTTTAGTTTTGTGCGAA 57.896 33.333 0.00 0.00 0.00 4.70
1816 1909 9.595823 GGTCTTAGTATGCTAACTGACATTTTA 57.404 33.333 18.27 0.00 35.65 1.52
1822 1915 9.726438 AGTATGCTAACTGACATTTTAGTCTTT 57.274 29.630 0.00 0.00 39.27 2.52
1964 2057 5.531634 TGTTTCAGGCAATTGAATCAAGTC 58.468 37.500 10.34 0.00 36.97 3.01
2075 2169 0.877071 ATGTTTGCCTTCTGAGTGCG 59.123 50.000 0.00 0.00 0.00 5.34
2158 2252 3.771479 ACCACTGAATATGTCTGAGCTCA 59.229 43.478 17.19 17.19 0.00 4.26
2190 2284 7.518161 TCAGTTAATGCTAACAGAACAATTCG 58.482 34.615 0.00 0.00 40.03 3.34
2201 2295 5.230942 ACAGAACAATTCGTAGACTGGAAG 58.769 41.667 0.00 0.00 34.32 3.46
2298 2396 5.598005 TGCCCCCATTCTAAGTTTTATCATG 59.402 40.000 0.00 0.00 0.00 3.07
2350 2448 8.632679 GTTATCAATCATCTTATGCCTTTCCAA 58.367 33.333 0.00 0.00 0.00 3.53
2442 2540 4.741676 GTCCTTTCATTGCAAAAGTGAGTG 59.258 41.667 1.71 0.00 32.90 3.51
2704 2822 5.299028 TGGTGGATGAAAATTGTGATATCCG 59.701 40.000 0.00 0.00 37.49 4.18
2731 2850 5.842907 TCATCTCTATGTCAAATACCACCG 58.157 41.667 0.00 0.00 34.50 4.94
2851 2996 5.003804 CACTTAAAGCTGCCTAGGAAGAAA 58.996 41.667 22.28 7.44 0.00 2.52
2905 3050 5.418840 AGCCTGTAAAATGTTGACTATTGGG 59.581 40.000 0.00 0.00 0.00 4.12
3022 3167 3.572682 ACGAGTATGTTCTGTCCAGTGAA 59.427 43.478 0.00 0.00 0.00 3.18
3023 3168 4.220821 ACGAGTATGTTCTGTCCAGTGAAT 59.779 41.667 0.00 0.00 0.00 2.57
3027 3173 7.187824 AGTATGTTCTGTCCAGTGAATATGT 57.812 36.000 0.00 0.00 0.00 2.29
3080 3226 6.994421 AGAATTAAAGTTGTTGGTTCCCAT 57.006 33.333 0.00 0.00 31.53 4.00
3125 3271 6.125029 AGGTTGCTGCAATTCTTCTATGTAT 58.875 36.000 19.11 0.00 0.00 2.29
3128 3274 8.405531 GGTTGCTGCAATTCTTCTATGTATTAA 58.594 33.333 19.11 0.00 0.00 1.40
3270 3498 4.038763 TGGAAGTGCTATCCTTATGTACGG 59.961 45.833 4.94 0.00 37.85 4.02
3331 3559 8.910351 AATCTATTTCTTTATACAGCTCACCC 57.090 34.615 0.00 0.00 0.00 4.61
3334 3562 7.987458 TCTATTTCTTTATACAGCTCACCCTTG 59.013 37.037 0.00 0.00 0.00 3.61
3364 3592 5.868801 ACAAAGTTGACTGGATTTTGTGTTG 59.131 36.000 0.00 0.00 39.65 3.33
3398 3631 4.650734 TCTTGTGTCTGGCAATGTCAATA 58.349 39.130 0.00 0.00 0.00 1.90
3448 3682 6.183360 CCAAAAACACAGGTGACAAATTTCAG 60.183 38.462 6.40 0.00 0.00 3.02
3458 3692 5.221880 GTGACAAATTTCAGCTTGTATGCA 58.778 37.500 0.00 0.00 35.93 3.96
3531 3765 5.691754 CCTTTTGTAAATTTCTGGCACTGAC 59.308 40.000 0.00 0.00 35.62 3.51
3617 3851 8.694540 TGTATGCAATTCTGGCAACTTATTTAT 58.305 29.630 0.00 0.00 45.60 1.40
3620 3854 8.292444 TGCAATTCTGGCAACTTATTTATACT 57.708 30.769 0.00 0.00 38.54 2.12
3621 3855 8.190122 TGCAATTCTGGCAACTTATTTATACTG 58.810 33.333 0.00 0.00 38.54 2.74
3622 3856 8.190784 GCAATTCTGGCAACTTATTTATACTGT 58.809 33.333 0.00 0.00 37.61 3.55
3623 3857 9.507280 CAATTCTGGCAACTTATTTATACTGTG 57.493 33.333 0.00 0.00 37.61 3.66
3624 3858 8.807948 ATTCTGGCAACTTATTTATACTGTGT 57.192 30.769 0.00 0.00 37.61 3.72
3625 3859 9.899661 ATTCTGGCAACTTATTTATACTGTGTA 57.100 29.630 0.00 0.00 37.61 2.90
3626 3860 9.727859 TTCTGGCAACTTATTTATACTGTGTAA 57.272 29.630 0.00 0.00 37.61 2.41
3627 3861 9.378551 TCTGGCAACTTATTTATACTGTGTAAG 57.621 33.333 0.00 0.00 37.61 2.34
3660 3894 5.587289 TGTGTCATTGTAAGCTTTTCCAAC 58.413 37.500 3.20 0.00 0.00 3.77
3839 4095 8.697846 TGTAAACATTATTCTCGTGTAAGAGG 57.302 34.615 0.00 0.00 38.71 3.69
3860 4116 6.575244 AGGTACACCTCCATGATTTTATCA 57.425 37.500 0.00 0.00 44.77 2.15
3914 4170 8.152023 ACTAATTAGGGAGAGTCAGAATGTTT 57.848 34.615 16.73 0.00 37.40 2.83
3998 4254 6.445357 AGTTTGTCCACTTTAAACATTCGT 57.555 33.333 0.00 0.00 36.91 3.85
4027 4285 9.915629 ACAGTATAAACTTAGATCCGAATGATC 57.084 33.333 0.00 0.00 41.32 2.92
4044 4302 6.034256 CGAATGATCTTCCTGTTTGATTTTGC 59.966 38.462 0.00 0.00 0.00 3.68
4128 4483 7.452562 AGCATTTGGATAGTTGGACAAAAATT 58.547 30.769 0.00 0.00 36.53 1.82
4183 4538 9.866655 ATTATCCAGCCTTTGAATACAAGATTA 57.133 29.630 0.00 0.00 37.32 1.75
4331 4862 4.944962 TTTCAGTGTCACAGACAAACAG 57.055 40.909 5.62 0.00 44.49 3.16
4381 4912 5.300752 CACAGTCCACAGTTTCTTCACTAT 58.699 41.667 0.00 0.00 0.00 2.12
4461 5075 1.419374 CACTTGTAGCGTGAGACACC 58.581 55.000 0.00 0.00 34.35 4.16
4501 5115 9.188588 GAAAACCAGCTAATTTAACTGTAAACC 57.811 33.333 6.19 0.00 32.04 3.27
4507 5121 6.016108 AGCTAATTTAACTGTAAACCCGCAAA 60.016 34.615 0.00 0.00 32.04 3.68
4508 5122 6.809689 GCTAATTTAACTGTAAACCCGCAAAT 59.190 34.615 0.00 0.00 32.04 2.32
4510 5124 9.843334 CTAATTTAACTGTAAACCCGCAAATTA 57.157 29.630 0.00 0.00 32.04 1.40
4511 5125 8.523523 AATTTAACTGTAAACCCGCAAATTAC 57.476 30.769 0.00 0.00 32.04 1.89
4512 5126 3.817148 ACTGTAAACCCGCAAATTACG 57.183 42.857 0.00 0.00 33.31 3.18
4513 5127 2.095617 ACTGTAAACCCGCAAATTACGC 60.096 45.455 0.00 0.00 33.31 4.42
4532 5149 2.229792 GCTGTTGGAACATTCTCACCA 58.770 47.619 0.00 0.00 39.30 4.17
4533 5150 2.622942 GCTGTTGGAACATTCTCACCAA 59.377 45.455 0.00 0.00 39.30 3.67
4534 5151 3.256631 GCTGTTGGAACATTCTCACCAAT 59.743 43.478 0.00 0.00 42.91 3.16
4535 5152 4.262164 GCTGTTGGAACATTCTCACCAATT 60.262 41.667 0.00 0.00 42.91 2.32
4536 5153 5.452078 TGTTGGAACATTCTCACCAATTC 57.548 39.130 0.00 0.00 42.91 2.17
4537 5154 5.139727 TGTTGGAACATTCTCACCAATTCT 58.860 37.500 0.00 0.00 42.91 2.40
4538 5155 5.598005 TGTTGGAACATTCTCACCAATTCTT 59.402 36.000 0.00 0.00 42.91 2.52
4539 5156 5.710513 TGGAACATTCTCACCAATTCTTG 57.289 39.130 0.00 0.00 0.00 3.02
4540 5157 4.022068 TGGAACATTCTCACCAATTCTTGC 60.022 41.667 0.00 0.00 0.00 4.01
4541 5158 4.022068 GGAACATTCTCACCAATTCTTGCA 60.022 41.667 0.00 0.00 0.00 4.08
4542 5159 4.778534 ACATTCTCACCAATTCTTGCAG 57.221 40.909 0.00 0.00 0.00 4.41
4543 5160 3.508793 ACATTCTCACCAATTCTTGCAGG 59.491 43.478 0.00 0.00 0.00 4.85
4544 5161 2.957402 TCTCACCAATTCTTGCAGGT 57.043 45.000 0.00 0.00 33.91 4.00
4545 5162 3.228188 TCTCACCAATTCTTGCAGGTT 57.772 42.857 0.00 0.00 30.44 3.50
4546 5163 3.565307 TCTCACCAATTCTTGCAGGTTT 58.435 40.909 0.00 0.00 30.44 3.27
4547 5164 3.569701 TCTCACCAATTCTTGCAGGTTTC 59.430 43.478 0.00 0.00 30.44 2.78
4548 5165 2.627699 TCACCAATTCTTGCAGGTTTCC 59.372 45.455 0.00 0.00 30.44 3.13
4549 5166 1.970640 ACCAATTCTTGCAGGTTTCCC 59.029 47.619 0.00 0.00 0.00 3.97
4550 5167 1.276138 CCAATTCTTGCAGGTTTCCCC 59.724 52.381 0.00 0.00 0.00 4.81
4551 5168 1.276138 CAATTCTTGCAGGTTTCCCCC 59.724 52.381 0.00 0.00 0.00 5.40
4949 5865 3.119280 TGTTGATCCATCAAGCATGCAAG 60.119 43.478 21.98 11.88 46.44 4.01
5028 5944 5.124457 ACAAATGTGCAATAGTAGAAGCAGG 59.876 40.000 0.00 0.00 37.72 4.85
5089 6005 0.033504 ACACTTCGTTGCCATCGAGT 59.966 50.000 0.00 0.00 38.52 4.18
5124 6040 1.492993 GGCTTGGACAGGGAGGTCTT 61.493 60.000 0.00 0.00 37.91 3.01
5285 6201 5.073428 GGATGTTCCCTTCTTCAACTTCTT 58.927 41.667 0.00 0.00 0.00 2.52
5296 6212 4.570772 TCTTCAACTTCTTCAACAACCGAG 59.429 41.667 0.00 0.00 0.00 4.63
5431 6347 7.727181 TGCCACTCTCCTTTAATAACTCTATC 58.273 38.462 0.00 0.00 0.00 2.08
5458 6380 3.993081 CTGTAGCAGAAGACTGAAGTTGG 59.007 47.826 0.00 0.00 46.03 3.77
5460 6382 4.587262 TGTAGCAGAAGACTGAAGTTGGTA 59.413 41.667 0.00 0.00 46.03 3.25
5552 6478 2.882876 CATGCAGCAGGGACTTGC 59.117 61.111 0.00 0.00 34.60 4.01
5632 6558 4.025730 CCATGCACGATGTATGTTCACTAC 60.026 45.833 12.35 0.00 38.55 2.73
5682 6611 4.580167 TGTTGCTTACTGATCAGTTTGCTT 59.420 37.500 32.88 16.43 42.54 3.91
5683 6612 5.067674 TGTTGCTTACTGATCAGTTTGCTTT 59.932 36.000 32.88 15.87 42.54 3.51
5684 6613 5.772825 TGCTTACTGATCAGTTTGCTTTT 57.227 34.783 32.88 15.30 42.54 2.27
5685 6614 5.522456 TGCTTACTGATCAGTTTGCTTTTG 58.478 37.500 32.88 18.69 42.54 2.44
5686 6615 4.383948 GCTTACTGATCAGTTTGCTTTTGC 59.616 41.667 32.14 19.04 43.42 3.68
5687 6616 5.766222 CTTACTGATCAGTTTGCTTTTGCT 58.234 37.500 32.14 6.49 43.47 3.91
5705 6634 5.776519 TTGCTGACATGTTTGTTTGTTTC 57.223 34.783 0.00 0.00 35.79 2.78
5843 6772 5.551760 AAAGCTTGAATCACCATTACTCG 57.448 39.130 0.00 0.00 0.00 4.18
5934 6863 7.761704 GCTCAAATTCTGTCTCATCTTAGTACA 59.238 37.037 0.00 0.00 0.00 2.90
6066 7065 0.590195 CCTGTTCACTGCAGCTTGAC 59.410 55.000 15.27 8.33 32.93 3.18
6096 7095 9.092876 TGTTTGTATGTTTGAAATGGAAAAGAC 57.907 29.630 0.00 0.00 0.00 3.01
6125 7124 6.884295 TGTTTCCTCAGAGGTATATTTTGGTG 59.116 38.462 16.65 0.00 36.53 4.17
6150 7149 3.953775 CACCCTGAACCCCGCACT 61.954 66.667 0.00 0.00 0.00 4.40
6190 8160 3.353836 GTTCCGCGGCAGAAGCAA 61.354 61.111 23.51 4.32 44.61 3.91
6296 8266 2.166664 GGGTTATAATTTGCACCGCCAA 59.833 45.455 0.00 0.00 0.00 4.52
6598 8568 3.629142 CTATTTTGGAACGGAGGGAGT 57.371 47.619 0.00 0.00 0.00 3.85
6599 8569 4.748277 CTATTTTGGAACGGAGGGAGTA 57.252 45.455 0.00 0.00 0.00 2.59
6600 8570 5.093849 CTATTTTGGAACGGAGGGAGTAA 57.906 43.478 0.00 0.00 0.00 2.24
6601 8571 3.412237 TTTTGGAACGGAGGGAGTAAG 57.588 47.619 0.00 0.00 0.00 2.34
6602 8572 2.314071 TTGGAACGGAGGGAGTAAGA 57.686 50.000 0.00 0.00 0.00 2.10
6603 8573 2.314071 TGGAACGGAGGGAGTAAGAA 57.686 50.000 0.00 0.00 0.00 2.52
6604 8574 2.612000 TGGAACGGAGGGAGTAAGAAA 58.388 47.619 0.00 0.00 0.00 2.52
6605 8575 2.301009 TGGAACGGAGGGAGTAAGAAAC 59.699 50.000 0.00 0.00 0.00 2.78
6606 8576 2.301009 GGAACGGAGGGAGTAAGAAACA 59.699 50.000 0.00 0.00 0.00 2.83
6607 8577 3.324117 GAACGGAGGGAGTAAGAAACAC 58.676 50.000 0.00 0.00 0.00 3.32
6608 8578 2.322658 ACGGAGGGAGTAAGAAACACA 58.677 47.619 0.00 0.00 0.00 3.72
6609 8579 2.701951 ACGGAGGGAGTAAGAAACACAA 59.298 45.455 0.00 0.00 0.00 3.33
6610 8580 3.326880 ACGGAGGGAGTAAGAAACACAAT 59.673 43.478 0.00 0.00 0.00 2.71
6611 8581 4.202430 ACGGAGGGAGTAAGAAACACAATT 60.202 41.667 0.00 0.00 0.00 2.32
6612 8582 4.392138 CGGAGGGAGTAAGAAACACAATTC 59.608 45.833 0.00 0.00 0.00 2.17
6613 8583 5.313712 GGAGGGAGTAAGAAACACAATTCA 58.686 41.667 0.00 0.00 0.00 2.57
6614 8584 5.412904 GGAGGGAGTAAGAAACACAATTCAG 59.587 44.000 0.00 0.00 0.00 3.02
6615 8585 5.941788 AGGGAGTAAGAAACACAATTCAGT 58.058 37.500 0.00 0.00 0.00 3.41
6616 8586 5.765182 AGGGAGTAAGAAACACAATTCAGTG 59.235 40.000 0.00 0.00 44.93 3.66
6617 8587 5.763204 GGGAGTAAGAAACACAATTCAGTGA 59.237 40.000 3.12 0.00 42.05 3.41
6618 8588 6.293462 GGGAGTAAGAAACACAATTCAGTGAC 60.293 42.308 3.12 0.00 42.05 3.67
6619 8589 6.483640 GGAGTAAGAAACACAATTCAGTGACT 59.516 38.462 3.12 0.00 42.05 3.41
6620 8590 7.251704 AGTAAGAAACACAATTCAGTGACTG 57.748 36.000 6.18 6.18 42.05 3.51
6621 8591 5.505173 AAGAAACACAATTCAGTGACTGG 57.495 39.130 13.33 0.00 42.05 4.00
6622 8592 3.316308 AGAAACACAATTCAGTGACTGGC 59.684 43.478 13.33 0.00 42.05 4.85
6623 8593 2.645838 ACACAATTCAGTGACTGGCT 57.354 45.000 13.33 0.00 42.05 4.75
6624 8594 2.936202 ACACAATTCAGTGACTGGCTT 58.064 42.857 13.33 3.84 42.05 4.35
6625 8595 2.620115 ACACAATTCAGTGACTGGCTTG 59.380 45.455 13.33 17.15 42.05 4.01
6626 8596 2.880268 CACAATTCAGTGACTGGCTTGA 59.120 45.455 24.52 1.93 42.05 3.02
6627 8597 2.880890 ACAATTCAGTGACTGGCTTGAC 59.119 45.455 24.52 0.00 32.16 3.18
6628 8598 2.880268 CAATTCAGTGACTGGCTTGACA 59.120 45.455 13.33 0.00 30.59 3.58
6629 8599 2.708216 TTCAGTGACTGGCTTGACAA 57.292 45.000 13.33 0.00 31.51 3.18
6630 8600 2.936919 TCAGTGACTGGCTTGACAAT 57.063 45.000 13.33 0.00 31.51 2.71
6631 8601 2.771089 TCAGTGACTGGCTTGACAATC 58.229 47.619 13.33 0.00 31.51 2.67
6632 8602 2.104622 TCAGTGACTGGCTTGACAATCA 59.895 45.455 13.33 0.00 31.51 2.57
6633 8603 2.880268 CAGTGACTGGCTTGACAATCAA 59.120 45.455 4.28 0.00 34.79 2.57
6634 8604 3.504906 CAGTGACTGGCTTGACAATCAAT 59.495 43.478 4.28 0.00 35.59 2.57
6635 8605 4.696877 CAGTGACTGGCTTGACAATCAATA 59.303 41.667 4.28 0.00 35.59 1.90
6636 8606 5.356190 CAGTGACTGGCTTGACAATCAATAT 59.644 40.000 4.28 0.00 35.59 1.28
6637 8607 5.948162 AGTGACTGGCTTGACAATCAATATT 59.052 36.000 0.00 0.00 35.59 1.28
6638 8608 6.435277 AGTGACTGGCTTGACAATCAATATTT 59.565 34.615 0.00 0.00 35.59 1.40
6639 8609 7.039504 AGTGACTGGCTTGACAATCAATATTTT 60.040 33.333 0.00 0.00 35.59 1.82
6640 8610 7.599998 GTGACTGGCTTGACAATCAATATTTTT 59.400 33.333 0.00 0.00 35.59 1.94
6662 8632 8.825667 TTTTTCTTGTTTTTAAGCAGTTGTCT 57.174 26.923 0.00 0.00 0.00 3.41
6663 8633 8.825667 TTTTCTTGTTTTTAAGCAGTTGTCTT 57.174 26.923 0.00 0.00 0.00 3.01
6664 8634 9.915629 TTTTCTTGTTTTTAAGCAGTTGTCTTA 57.084 25.926 0.00 0.00 0.00 2.10
6669 8639 8.125728 TGTTTTTAAGCAGTTGTCTTATTTGC 57.874 30.769 0.00 0.00 35.09 3.68
6670 8640 7.761704 TGTTTTTAAGCAGTTGTCTTATTTGCA 59.238 29.630 0.00 0.00 37.24 4.08
6671 8641 7.928908 TTTTAAGCAGTTGTCTTATTTGCAG 57.071 32.000 0.00 0.00 37.24 4.41
6672 8642 6.875948 TTAAGCAGTTGTCTTATTTGCAGA 57.124 33.333 0.00 0.00 37.24 4.26
6673 8643 5.972107 AAGCAGTTGTCTTATTTGCAGAT 57.028 34.783 0.00 0.00 37.24 2.90
6674 8644 5.972107 AGCAGTTGTCTTATTTGCAGATT 57.028 34.783 0.00 0.00 37.24 2.40
6675 8645 5.947443 AGCAGTTGTCTTATTTGCAGATTC 58.053 37.500 0.00 0.00 37.24 2.52
6676 8646 5.709164 AGCAGTTGTCTTATTTGCAGATTCT 59.291 36.000 0.00 0.00 37.24 2.40
6677 8647 6.208204 AGCAGTTGTCTTATTTGCAGATTCTT 59.792 34.615 0.00 0.00 37.24 2.52
6678 8648 7.391554 AGCAGTTGTCTTATTTGCAGATTCTTA 59.608 33.333 0.00 0.00 37.24 2.10
6679 8649 8.186821 GCAGTTGTCTTATTTGCAGATTCTTAT 58.813 33.333 0.00 0.00 34.99 1.73
6680 8650 9.713740 CAGTTGTCTTATTTGCAGATTCTTATC 57.286 33.333 0.00 0.00 0.00 1.75
6681 8651 8.897752 AGTTGTCTTATTTGCAGATTCTTATCC 58.102 33.333 0.00 0.00 0.00 2.59
6682 8652 8.677300 GTTGTCTTATTTGCAGATTCTTATCCA 58.323 33.333 0.00 0.00 0.00 3.41
6683 8653 8.985315 TGTCTTATTTGCAGATTCTTATCCAT 57.015 30.769 0.00 0.00 0.00 3.41
6684 8654 9.060347 TGTCTTATTTGCAGATTCTTATCCATC 57.940 33.333 0.00 0.00 0.00 3.51
6685 8655 8.510505 GTCTTATTTGCAGATTCTTATCCATCC 58.489 37.037 0.00 0.00 0.00 3.51
6686 8656 8.443176 TCTTATTTGCAGATTCTTATCCATCCT 58.557 33.333 0.00 0.00 0.00 3.24
6687 8657 9.075678 CTTATTTGCAGATTCTTATCCATCCTT 57.924 33.333 0.00 0.00 0.00 3.36
6688 8658 6.704289 TTTGCAGATTCTTATCCATCCTTG 57.296 37.500 0.00 0.00 0.00 3.61
6689 8659 5.378230 TGCAGATTCTTATCCATCCTTGT 57.622 39.130 0.00 0.00 0.00 3.16
6690 8660 6.499106 TGCAGATTCTTATCCATCCTTGTA 57.501 37.500 0.00 0.00 0.00 2.41
6691 8661 6.899089 TGCAGATTCTTATCCATCCTTGTAA 58.101 36.000 0.00 0.00 0.00 2.41
6692 8662 7.345691 TGCAGATTCTTATCCATCCTTGTAAA 58.654 34.615 0.00 0.00 0.00 2.01
6693 8663 7.833682 TGCAGATTCTTATCCATCCTTGTAAAA 59.166 33.333 0.00 0.00 0.00 1.52
6694 8664 8.686334 GCAGATTCTTATCCATCCTTGTAAAAA 58.314 33.333 0.00 0.00 0.00 1.94
6734 8704 6.564328 AGAAAATATTGTGAGGATTTTCCGC 58.436 36.000 13.10 0.00 44.87 5.54
6735 8705 5.913137 AAATATTGTGAGGATTTTCCGCA 57.087 34.783 0.00 0.00 44.14 5.69
6742 8712 3.194861 TGAGGATTTTCCGCACTATTCG 58.805 45.455 0.00 0.00 41.47 3.34
6743 8713 3.987683 TGAGGATTTTCCGCACTATTCGG 60.988 47.826 0.00 0.00 41.47 4.30
6744 8714 1.002792 GGATTTTCCGCACTATTCGGC 60.003 52.381 0.00 0.00 46.05 5.54
6745 8715 1.002792 GATTTTCCGCACTATTCGGCC 60.003 52.381 0.00 0.00 46.05 6.13
6746 8716 0.321741 TTTTCCGCACTATTCGGCCA 60.322 50.000 2.24 0.00 46.05 5.36
6747 8717 0.321741 TTTCCGCACTATTCGGCCAA 60.322 50.000 2.24 0.00 46.05 4.52
6748 8718 0.321741 TTCCGCACTATTCGGCCAAA 60.322 50.000 2.24 0.00 46.05 3.28
6749 8719 0.321741 TCCGCACTATTCGGCCAAAA 60.322 50.000 2.24 0.00 46.05 2.44
6750 8720 0.738389 CCGCACTATTCGGCCAAAAT 59.262 50.000 2.24 4.41 40.46 1.82
6751 8721 1.533756 CCGCACTATTCGGCCAAAATG 60.534 52.381 2.24 0.00 40.46 2.32
6752 8722 1.533756 CGCACTATTCGGCCAAAATGG 60.534 52.381 2.24 6.61 41.55 3.16
6765 8735 4.799419 CCAAAATGGCAAGTTCACTTTG 57.201 40.909 0.00 0.00 33.00 2.77
6766 8736 4.190772 CCAAAATGGCAAGTTCACTTTGT 58.809 39.130 0.00 0.00 31.79 2.83
6767 8737 4.034279 CCAAAATGGCAAGTTCACTTTGTG 59.966 41.667 0.00 0.00 31.79 3.33
6768 8738 4.734398 AAATGGCAAGTTCACTTTGTGA 57.266 36.364 0.00 0.00 41.09 3.58
6769 8739 3.996150 ATGGCAAGTTCACTTTGTGAG 57.004 42.857 0.00 0.00 43.69 3.51
6770 8740 2.023673 TGGCAAGTTCACTTTGTGAGG 58.976 47.619 0.66 0.00 43.69 3.86
6771 8741 2.297701 GGCAAGTTCACTTTGTGAGGA 58.702 47.619 0.66 0.00 43.69 3.71
6772 8742 2.291741 GGCAAGTTCACTTTGTGAGGAG 59.708 50.000 0.66 0.00 43.69 3.69
6773 8743 2.945668 GCAAGTTCACTTTGTGAGGAGT 59.054 45.455 0.66 0.00 43.69 3.85
6774 8744 3.378427 GCAAGTTCACTTTGTGAGGAGTT 59.622 43.478 0.66 0.00 43.69 3.01
6775 8745 4.142381 GCAAGTTCACTTTGTGAGGAGTTT 60.142 41.667 0.66 0.00 43.69 2.66
6776 8746 5.573146 CAAGTTCACTTTGTGAGGAGTTTC 58.427 41.667 0.66 0.00 43.69 2.78
6777 8747 4.843728 AGTTCACTTTGTGAGGAGTTTCA 58.156 39.130 0.66 0.00 43.69 2.69
6778 8748 4.636206 AGTTCACTTTGTGAGGAGTTTCAC 59.364 41.667 0.66 0.00 43.69 3.18
6779 8749 4.487714 TCACTTTGTGAGGAGTTTCACT 57.512 40.909 7.56 0.00 46.00 3.41
6780 8750 5.607939 TCACTTTGTGAGGAGTTTCACTA 57.392 39.130 7.56 0.00 46.00 2.74
6781 8751 5.984725 TCACTTTGTGAGGAGTTTCACTAA 58.015 37.500 7.56 5.53 46.00 2.24
6782 8752 6.411376 TCACTTTGTGAGGAGTTTCACTAAA 58.589 36.000 7.56 5.93 46.00 1.85
6783 8753 6.538742 TCACTTTGTGAGGAGTTTCACTAAAG 59.461 38.462 18.45 18.45 46.00 1.85
6784 8754 5.823045 ACTTTGTGAGGAGTTTCACTAAAGG 59.177 40.000 21.10 9.46 46.00 3.11
6785 8755 5.367945 TTGTGAGGAGTTTCACTAAAGGT 57.632 39.130 7.56 0.00 46.00 3.50
6786 8756 5.367945 TGTGAGGAGTTTCACTAAAGGTT 57.632 39.130 7.56 0.00 46.00 3.50
6787 8757 5.751586 TGTGAGGAGTTTCACTAAAGGTTT 58.248 37.500 7.56 0.00 46.00 3.27
6788 8758 6.184789 TGTGAGGAGTTTCACTAAAGGTTTT 58.815 36.000 7.56 0.00 46.00 2.43
6789 8759 6.094881 TGTGAGGAGTTTCACTAAAGGTTTTG 59.905 38.462 7.56 0.00 46.00 2.44
6790 8760 5.067283 TGAGGAGTTTCACTAAAGGTTTTGC 59.933 40.000 0.00 0.00 0.00 3.68
6791 8761 5.201243 AGGAGTTTCACTAAAGGTTTTGCT 58.799 37.500 0.00 0.00 0.00 3.91
6792 8762 5.067805 AGGAGTTTCACTAAAGGTTTTGCTG 59.932 40.000 0.00 0.00 0.00 4.41
6793 8763 5.067283 GGAGTTTCACTAAAGGTTTTGCTGA 59.933 40.000 0.00 0.00 0.00 4.26
6794 8764 6.136541 AGTTTCACTAAAGGTTTTGCTGAG 57.863 37.500 0.00 0.00 0.00 3.35
6795 8765 5.885912 AGTTTCACTAAAGGTTTTGCTGAGA 59.114 36.000 0.00 0.00 0.00 3.27
6796 8766 6.377146 AGTTTCACTAAAGGTTTTGCTGAGAA 59.623 34.615 0.00 0.00 0.00 2.87
6797 8767 6.767524 TTCACTAAAGGTTTTGCTGAGAAA 57.232 33.333 0.00 0.00 0.00 2.52
6798 8768 6.377327 TCACTAAAGGTTTTGCTGAGAAAG 57.623 37.500 0.00 0.00 0.00 2.62
6812 8782 5.294050 CTGAGAAAGCAAAGAAAGCCTAG 57.706 43.478 0.00 0.00 0.00 3.02
6813 8783 4.718961 TGAGAAAGCAAAGAAAGCCTAGT 58.281 39.130 0.00 0.00 0.00 2.57
6814 8784 5.865085 TGAGAAAGCAAAGAAAGCCTAGTA 58.135 37.500 0.00 0.00 0.00 1.82
6815 8785 5.934625 TGAGAAAGCAAAGAAAGCCTAGTAG 59.065 40.000 0.00 0.00 0.00 2.57
6816 8786 6.115448 AGAAAGCAAAGAAAGCCTAGTAGA 57.885 37.500 0.00 0.00 0.00 2.59
6817 8787 6.716284 AGAAAGCAAAGAAAGCCTAGTAGAT 58.284 36.000 0.00 0.00 0.00 1.98
6818 8788 6.821160 AGAAAGCAAAGAAAGCCTAGTAGATC 59.179 38.462 0.00 0.00 0.00 2.75
6819 8789 5.029807 AGCAAAGAAAGCCTAGTAGATCC 57.970 43.478 0.00 0.00 0.00 3.36
6820 8790 3.804873 GCAAAGAAAGCCTAGTAGATCCG 59.195 47.826 0.00 0.00 0.00 4.18
6821 8791 3.737032 AAGAAAGCCTAGTAGATCCGC 57.263 47.619 0.00 0.00 0.00 5.54
6822 8792 2.952116 AGAAAGCCTAGTAGATCCGCT 58.048 47.619 0.00 0.00 0.00 5.52
6823 8793 4.101645 AGAAAGCCTAGTAGATCCGCTA 57.898 45.455 0.00 0.00 0.00 4.26
6824 8794 4.471548 AGAAAGCCTAGTAGATCCGCTAA 58.528 43.478 0.00 0.00 0.00 3.09
6825 8795 4.894114 AGAAAGCCTAGTAGATCCGCTAAA 59.106 41.667 0.00 0.00 0.00 1.85
6826 8796 5.363005 AGAAAGCCTAGTAGATCCGCTAAAA 59.637 40.000 0.00 0.00 0.00 1.52
6827 8797 4.587584 AGCCTAGTAGATCCGCTAAAAC 57.412 45.455 0.00 0.00 0.00 2.43
6828 8798 4.216708 AGCCTAGTAGATCCGCTAAAACT 58.783 43.478 0.00 0.00 0.00 2.66
6829 8799 4.278919 AGCCTAGTAGATCCGCTAAAACTC 59.721 45.833 0.00 0.00 0.00 3.01
6830 8800 4.785417 CCTAGTAGATCCGCTAAAACTCG 58.215 47.826 0.00 0.00 0.00 4.18
6831 8801 3.712091 AGTAGATCCGCTAAAACTCGG 57.288 47.619 0.00 0.00 46.52 4.63
6832 8802 3.022406 AGTAGATCCGCTAAAACTCGGT 58.978 45.455 0.47 0.00 45.44 4.69
6833 8803 4.202441 AGTAGATCCGCTAAAACTCGGTA 58.798 43.478 0.47 0.00 45.44 4.02
6834 8804 3.433513 AGATCCGCTAAAACTCGGTAC 57.566 47.619 0.47 0.00 45.44 3.34
6835 8805 3.022406 AGATCCGCTAAAACTCGGTACT 58.978 45.455 0.47 0.00 45.44 2.73
6836 8806 2.642139 TCCGCTAAAACTCGGTACTG 57.358 50.000 0.00 0.00 45.44 2.74
6837 8807 0.997196 CCGCTAAAACTCGGTACTGC 59.003 55.000 0.00 0.00 40.72 4.40
6838 8808 1.670674 CCGCTAAAACTCGGTACTGCA 60.671 52.381 0.00 0.00 40.72 4.41
6839 8809 2.063266 CGCTAAAACTCGGTACTGCAA 58.937 47.619 0.00 0.00 0.00 4.08
6840 8810 2.477375 CGCTAAAACTCGGTACTGCAAA 59.523 45.455 0.00 0.00 0.00 3.68
6841 8811 3.059461 CGCTAAAACTCGGTACTGCAAAA 60.059 43.478 0.00 0.00 0.00 2.44
6842 8812 4.216731 GCTAAAACTCGGTACTGCAAAAC 58.783 43.478 0.00 0.00 0.00 2.43
6843 8813 3.328237 AAAACTCGGTACTGCAAAACG 57.672 42.857 0.00 0.00 0.00 3.60
6844 8814 2.228138 AACTCGGTACTGCAAAACGA 57.772 45.000 8.42 8.42 0.00 3.85
6845 8815 2.450609 ACTCGGTACTGCAAAACGAT 57.549 45.000 9.09 0.00 32.75 3.73
6846 8816 2.762745 ACTCGGTACTGCAAAACGATT 58.237 42.857 9.09 1.72 32.75 3.34
6847 8817 3.135994 ACTCGGTACTGCAAAACGATTT 58.864 40.909 9.09 0.00 32.75 2.17
6848 8818 3.562557 ACTCGGTACTGCAAAACGATTTT 59.437 39.130 9.09 0.00 32.75 1.82
6868 8838 4.735358 GGGAACGTGAAGGCCCCC 62.735 72.222 0.00 0.00 33.87 5.40
6869 8839 3.961414 GGAACGTGAAGGCCCCCA 61.961 66.667 0.00 0.00 0.00 4.96
6870 8840 2.671963 GAACGTGAAGGCCCCCAC 60.672 66.667 13.50 13.50 0.00 4.61
6874 8844 3.961414 GTGAAGGCCCCCACGGAA 61.961 66.667 0.00 0.00 0.00 4.30
6875 8845 3.961414 TGAAGGCCCCCACGGAAC 61.961 66.667 0.00 0.00 0.00 3.62
6876 8846 3.647771 GAAGGCCCCCACGGAACT 61.648 66.667 0.00 0.00 0.00 3.01
6877 8847 3.920093 GAAGGCCCCCACGGAACTG 62.920 68.421 0.00 0.00 0.00 3.16
6878 8848 4.974438 AGGCCCCCACGGAACTGA 62.974 66.667 0.00 0.00 0.00 3.41
6879 8849 3.728373 GGCCCCCACGGAACTGAT 61.728 66.667 0.00 0.00 0.00 2.90
6880 8850 2.124695 GCCCCCACGGAACTGATC 60.125 66.667 0.00 0.00 0.00 2.92
6881 8851 2.590092 CCCCCACGGAACTGATCC 59.410 66.667 0.00 0.00 45.57 3.36
6893 8863 4.872664 GGAACTGATCCGATAAATCTCGT 58.127 43.478 0.00 0.00 38.79 4.18
6894 8864 6.010294 GGAACTGATCCGATAAATCTCGTA 57.990 41.667 0.00 0.00 38.79 3.43
6895 8865 5.857517 GGAACTGATCCGATAAATCTCGTAC 59.142 44.000 0.00 0.00 38.79 3.67
6896 8866 6.294065 GGAACTGATCCGATAAATCTCGTACT 60.294 42.308 0.00 0.00 38.79 2.73
6897 8867 6.636562 ACTGATCCGATAAATCTCGTACTT 57.363 37.500 0.00 0.00 36.93 2.24
6898 8868 6.670233 ACTGATCCGATAAATCTCGTACTTC 58.330 40.000 0.00 0.00 36.93 3.01
6899 8869 6.262496 ACTGATCCGATAAATCTCGTACTTCA 59.738 38.462 0.00 0.00 36.93 3.02
6900 8870 7.034685 TGATCCGATAAATCTCGTACTTCAA 57.965 36.000 0.00 0.00 36.93 2.69
6901 8871 7.485810 TGATCCGATAAATCTCGTACTTCAAA 58.514 34.615 0.00 0.00 36.93 2.69
6902 8872 8.141909 TGATCCGATAAATCTCGTACTTCAAAT 58.858 33.333 0.00 0.00 36.93 2.32
6903 8873 8.888579 ATCCGATAAATCTCGTACTTCAAATT 57.111 30.769 0.00 0.00 36.93 1.82
6904 8874 8.712285 TCCGATAAATCTCGTACTTCAAATTT 57.288 30.769 0.00 0.00 36.93 1.82
6905 8875 9.806203 TCCGATAAATCTCGTACTTCAAATTTA 57.194 29.630 0.00 0.00 36.93 1.40
6914 8884 9.706691 TCTCGTACTTCAAATTTAGAAACATCT 57.293 29.630 0.00 0.00 0.00 2.90
6915 8885 9.959775 CTCGTACTTCAAATTTAGAAACATCTC 57.040 33.333 0.00 0.00 0.00 2.75
6916 8886 8.932791 TCGTACTTCAAATTTAGAAACATCTCC 58.067 33.333 0.00 0.00 0.00 3.71
6917 8887 8.175716 CGTACTTCAAATTTAGAAACATCTCCC 58.824 37.037 0.00 0.00 0.00 4.30
6918 8888 7.468141 ACTTCAAATTTAGAAACATCTCCCC 57.532 36.000 0.00 0.00 0.00 4.81
6919 8889 7.010160 ACTTCAAATTTAGAAACATCTCCCCA 58.990 34.615 0.00 0.00 0.00 4.96
6920 8890 7.675619 ACTTCAAATTTAGAAACATCTCCCCAT 59.324 33.333 0.00 0.00 0.00 4.00
6921 8891 8.434589 TTCAAATTTAGAAACATCTCCCCATT 57.565 30.769 0.00 0.00 0.00 3.16
6922 8892 9.540538 TTCAAATTTAGAAACATCTCCCCATTA 57.459 29.630 0.00 0.00 0.00 1.90
6923 8893 9.189156 TCAAATTTAGAAACATCTCCCCATTAG 57.811 33.333 0.00 0.00 0.00 1.73
6924 8894 9.189156 CAAATTTAGAAACATCTCCCCATTAGA 57.811 33.333 0.00 0.00 0.00 2.10
6925 8895 9.768215 AAATTTAGAAACATCTCCCCATTAGAA 57.232 29.630 0.00 0.00 0.00 2.10
6926 8896 9.768215 AATTTAGAAACATCTCCCCATTAGAAA 57.232 29.630 0.00 0.00 0.00 2.52
6927 8897 9.768215 ATTTAGAAACATCTCCCCATTAGAAAA 57.232 29.630 0.00 0.00 0.00 2.29
6928 8898 9.768215 TTTAGAAACATCTCCCCATTAGAAAAT 57.232 29.630 0.00 0.00 0.00 1.82
6930 8900 8.986929 AGAAACATCTCCCCATTAGAAAATAG 57.013 34.615 0.00 0.00 0.00 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 7.225931 TGCTCGATTTATTTATAGGCTTTCGTT 59.774 33.333 0.00 0.00 0.00 3.85
76 77 2.952714 CTGCAAGGGGAAAGACAGG 58.047 57.895 0.00 0.00 0.00 4.00
122 124 0.755079 CTTGATCCGATCTGCTCCCA 59.245 55.000 9.78 0.00 0.00 4.37
152 154 4.263677 CGAAAATTGATCTTTGGATGCACG 59.736 41.667 0.00 0.00 31.46 5.34
186 188 3.122278 CGTGTACTTAAACCGTGACCATG 59.878 47.826 0.00 0.00 0.00 3.66
207 209 1.983605 AGAGAACATTGTTACGTCGCG 59.016 47.619 0.00 0.00 0.00 5.87
208 210 2.984471 TGAGAGAACATTGTTACGTCGC 59.016 45.455 1.15 2.99 0.00 5.19
209 211 4.227538 ACTGAGAGAACATTGTTACGTCG 58.772 43.478 1.15 0.00 0.00 5.12
210 212 7.201444 CCATAACTGAGAGAACATTGTTACGTC 60.201 40.741 1.15 0.45 0.00 4.34
258 264 0.798776 GTTGGGATGCACTCGTTGAG 59.201 55.000 0.00 0.00 35.52 3.02
361 369 5.811399 TTCCAATACGTCATGAAATGGAC 57.189 39.130 12.92 0.00 46.73 4.02
416 425 7.408851 TGCATTCAGGCTCTATTTGGATACAC 61.409 42.308 0.00 0.00 40.16 2.90
463 473 5.394883 CGGGGCATTCACTAAACTAGTAGAA 60.395 44.000 3.59 0.00 37.23 2.10
528 540 2.227194 GTCCACGAAAAACCCAGATGT 58.773 47.619 0.00 0.00 0.00 3.06
532 598 1.281656 GCGTCCACGAAAAACCCAG 59.718 57.895 2.58 0.00 43.02 4.45
698 770 0.179026 CAGAGGTCGATCGGGAGGTA 60.179 60.000 16.41 0.00 0.00 3.08
725 797 2.979678 ACAAGAAAAGCTACTCCCTCCA 59.020 45.455 0.00 0.00 0.00 3.86
727 799 6.392625 AAAAACAAGAAAAGCTACTCCCTC 57.607 37.500 0.00 0.00 0.00 4.30
756 828 6.332630 CAACAGAACAAAGTGGACAAGAAAT 58.667 36.000 0.00 0.00 0.00 2.17
781 853 7.278868 CCTACATTTCAGTAAGAGGCTGTTAAG 59.721 40.741 5.59 2.57 35.60 1.85
782 854 7.103641 CCTACATTTCAGTAAGAGGCTGTTAA 58.896 38.462 5.59 0.00 35.60 2.01
783 855 6.351881 CCCTACATTTCAGTAAGAGGCTGTTA 60.352 42.308 0.00 0.00 35.60 2.41
784 856 5.491982 CCTACATTTCAGTAAGAGGCTGTT 58.508 41.667 1.39 1.39 35.60 3.16
785 857 4.080863 CCCTACATTTCAGTAAGAGGCTGT 60.081 45.833 0.00 0.00 35.60 4.40
786 858 4.162320 TCCCTACATTTCAGTAAGAGGCTG 59.838 45.833 0.00 0.00 35.43 4.85
787 859 4.362677 TCCCTACATTTCAGTAAGAGGCT 58.637 43.478 0.00 0.00 0.00 4.58
788 860 4.755266 TCCCTACATTTCAGTAAGAGGC 57.245 45.455 0.00 0.00 0.00 4.70
789 861 6.116126 CCTTTCCCTACATTTCAGTAAGAGG 58.884 44.000 0.00 0.00 0.00 3.69
790 862 5.586643 GCCTTTCCCTACATTTCAGTAAGAG 59.413 44.000 0.00 0.00 0.00 2.85
791 863 5.250774 AGCCTTTCCCTACATTTCAGTAAGA 59.749 40.000 0.00 0.00 0.00 2.10
792 864 5.355350 CAGCCTTTCCCTACATTTCAGTAAG 59.645 44.000 0.00 0.00 0.00 2.34
793 865 5.253330 CAGCCTTTCCCTACATTTCAGTAA 58.747 41.667 0.00 0.00 0.00 2.24
794 866 4.843728 CAGCCTTTCCCTACATTTCAGTA 58.156 43.478 0.00 0.00 0.00 2.74
795 867 3.690460 CAGCCTTTCCCTACATTTCAGT 58.310 45.455 0.00 0.00 0.00 3.41
796 868 2.424956 GCAGCCTTTCCCTACATTTCAG 59.575 50.000 0.00 0.00 0.00 3.02
797 869 2.446435 GCAGCCTTTCCCTACATTTCA 58.554 47.619 0.00 0.00 0.00 2.69
798 870 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
799 871 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
800 872 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
801 873 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
802 874 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
803 875 0.248289 TGTACGCAGCCTTTCCCTAC 59.752 55.000 0.00 0.00 0.00 3.18
804 876 0.978151 TTGTACGCAGCCTTTCCCTA 59.022 50.000 0.00 0.00 0.00 3.53
805 877 0.328258 ATTGTACGCAGCCTTTCCCT 59.672 50.000 0.00 0.00 0.00 4.20
806 878 1.940613 CTATTGTACGCAGCCTTTCCC 59.059 52.381 0.00 0.00 0.00 3.97
807 879 2.608090 GTCTATTGTACGCAGCCTTTCC 59.392 50.000 0.00 0.00 0.00 3.13
808 880 2.608090 GGTCTATTGTACGCAGCCTTTC 59.392 50.000 0.00 0.00 0.00 2.62
809 881 2.629051 GGTCTATTGTACGCAGCCTTT 58.371 47.619 0.00 0.00 0.00 3.11
810 882 1.134491 GGGTCTATTGTACGCAGCCTT 60.134 52.381 0.00 0.00 0.00 4.35
811 883 0.464452 GGGTCTATTGTACGCAGCCT 59.536 55.000 0.00 0.00 0.00 4.58
812 884 0.177141 TGGGTCTATTGTACGCAGCC 59.823 55.000 0.00 0.00 35.18 4.85
813 885 2.018542 TTGGGTCTATTGTACGCAGC 57.981 50.000 0.00 0.00 40.36 5.25
814 886 3.370978 CACTTTGGGTCTATTGTACGCAG 59.629 47.826 0.00 0.00 40.36 5.18
815 887 3.331150 CACTTTGGGTCTATTGTACGCA 58.669 45.455 0.00 0.00 37.94 5.24
816 888 2.676342 CCACTTTGGGTCTATTGTACGC 59.324 50.000 0.00 0.00 32.67 4.42
817 889 3.934068 ACCACTTTGGGTCTATTGTACG 58.066 45.455 0.00 0.00 43.37 3.67
827 899 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
828 900 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
829 901 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
830 902 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
831 903 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
832 904 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
833 905 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
834 906 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
841 913 4.735599 AGGGTCCGGGGAAGGGTC 62.736 72.222 0.00 0.00 0.00 4.46
861 933 2.109126 CAGGTAGCTCCCGCTTTGC 61.109 63.158 0.00 0.00 46.47 3.68
862 934 2.109126 GCAGGTAGCTCCCGCTTTG 61.109 63.158 0.00 0.00 46.47 2.77
863 935 2.269241 GCAGGTAGCTCCCGCTTT 59.731 61.111 0.00 0.00 46.47 3.51
864 936 3.003173 TGCAGGTAGCTCCCGCTT 61.003 61.111 11.96 0.00 46.47 4.68
870 942 4.840005 GCCCGGTGCAGGTAGCTC 62.840 72.222 9.72 0.00 45.94 4.09
896 968 5.347364 GCAAGTTGTAGCAACAGAACAAAAA 59.653 36.000 13.48 0.00 36.83 1.94
897 969 4.862018 GCAAGTTGTAGCAACAGAACAAAA 59.138 37.500 13.48 0.00 36.83 2.44
898 970 4.082517 TGCAAGTTGTAGCAACAGAACAAA 60.083 37.500 13.48 0.00 37.90 2.83
899 971 3.441922 TGCAAGTTGTAGCAACAGAACAA 59.558 39.130 13.48 0.00 37.90 2.83
900 972 3.013219 TGCAAGTTGTAGCAACAGAACA 58.987 40.909 13.48 4.47 37.90 3.18
901 973 3.691049 TGCAAGTTGTAGCAACAGAAC 57.309 42.857 13.48 2.29 37.90 3.01
983 1055 3.356290 GCCATGGTGACCTATTCAAAGT 58.644 45.455 14.67 0.00 35.39 2.66
1107 1179 8.877808 AGAAGACAAAAAGAATCAATGAAACC 57.122 30.769 0.00 0.00 0.00 3.27
1131 1203 7.086376 CCACCACATCAACTATTGAGAAAAAG 58.914 38.462 0.00 0.00 43.98 2.27
1136 1208 3.008923 TGCCACCACATCAACTATTGAGA 59.991 43.478 0.00 0.00 43.98 3.27
1258 1334 8.883731 CCTCAAACCATGTTAACTATAGTTCAG 58.116 37.037 21.25 6.69 39.31 3.02
1260 1336 8.788325 ACCTCAAACCATGTTAACTATAGTTC 57.212 34.615 21.25 9.15 39.31 3.01
1359 1438 4.672587 TCCAGGTACATCATACTCAAGC 57.327 45.455 0.00 0.00 0.00 4.01
1388 1467 7.543868 AGAGTTGAGATCTAAGAACAAACATCG 59.456 37.037 0.00 0.00 0.00 3.84
1451 1530 1.781786 AGACTCCAGATGTATGCCGT 58.218 50.000 0.00 0.00 0.00 5.68
1504 1593 4.927425 TCAAGGTTTCGAAACTAGAATCCG 59.073 41.667 33.23 16.84 40.54 4.18
1517 1606 6.978343 TTATATCCACAAGTCAAGGTTTCG 57.022 37.500 0.00 0.00 0.00 3.46
1658 1750 5.961263 CGCACAAAACTAAAAACGTAGAGTT 59.039 36.000 0.00 0.00 46.76 3.01
1684 1776 8.387354 GCTTTAGTGTTAGTGCAAATTTGTTTT 58.613 29.630 19.03 7.67 0.00 2.43
1964 2057 3.862642 GCCGTAGATTCTCTAATGGGCAG 60.863 52.174 13.19 0.00 39.68 4.85
2049 2143 6.127897 GCACTCAGAAGGCAAACATAAAGTAT 60.128 38.462 0.00 0.00 0.00 2.12
2056 2150 0.877071 CGCACTCAGAAGGCAAACAT 59.123 50.000 0.00 0.00 0.00 2.71
2190 2284 5.539048 TGCTGAGTTTTACTTCCAGTCTAC 58.461 41.667 0.00 0.00 0.00 2.59
2201 2295 4.756084 ACTGCAAGATGCTGAGTTTTAC 57.244 40.909 14.84 0.00 45.31 2.01
2209 2305 7.307694 TCAGTTTAAAATACTGCAAGATGCTG 58.692 34.615 7.55 7.55 45.31 4.41
2272 2368 3.825908 AAAACTTAGAATGGGGGCAGA 57.174 42.857 0.00 0.00 0.00 4.26
2350 2448 2.308570 TCACTACAATTGTCAGGCCCAT 59.691 45.455 15.85 0.00 0.00 4.00
2442 2540 6.705863 AATTTCTCCAAGGATAACATGAGC 57.294 37.500 0.00 0.00 0.00 4.26
2704 2822 8.778358 GGTGGTATTTGACATAGAGATGAAATC 58.222 37.037 0.00 0.00 46.04 2.17
2905 3050 3.634910 TGGCAACCTGTTAAAGACTTTCC 59.365 43.478 3.07 0.00 0.00 3.13
3151 3378 8.792633 TCAAATAGTTTCGTTCTCCATTTGAAT 58.207 29.630 0.00 0.00 37.74 2.57
3331 3559 5.890334 TCCAGTCAACTTTGTTTAAGCAAG 58.110 37.500 4.87 3.12 37.37 4.01
3334 3562 7.277760 ACAAAATCCAGTCAACTTTGTTTAAGC 59.722 33.333 0.00 0.00 36.98 3.09
3364 3592 6.162777 GCCAGACACAAGATCTAGATATTCC 58.837 44.000 9.65 0.00 0.00 3.01
3398 3631 8.166422 GCTACAACCTAAGCCATACATTTTAT 57.834 34.615 0.00 0.00 32.40 1.40
3448 3682 6.198966 GCCTTACAATAACAATGCATACAAGC 59.801 38.462 0.00 0.00 0.00 4.01
3531 3765 5.687770 TGGAAGTGTGTGTCAATGTAATG 57.312 39.130 0.00 0.00 0.00 1.90
3571 3805 8.725148 GCATACAGCAGCAATAAACTATATCTT 58.275 33.333 0.00 0.00 44.79 2.40
3617 3851 5.221362 ACACAGCATACACACTTACACAGTA 60.221 40.000 0.00 0.00 32.76 2.74
3618 3852 4.058124 CACAGCATACACACTTACACAGT 58.942 43.478 0.00 0.00 35.35 3.55
3619 3853 4.058124 ACACAGCATACACACTTACACAG 58.942 43.478 0.00 0.00 0.00 3.66
3620 3854 4.055360 GACACAGCATACACACTTACACA 58.945 43.478 0.00 0.00 0.00 3.72
3621 3855 4.055360 TGACACAGCATACACACTTACAC 58.945 43.478 0.00 0.00 0.00 2.90
3622 3856 4.329462 TGACACAGCATACACACTTACA 57.671 40.909 0.00 0.00 0.00 2.41
3623 3857 5.179368 ACAATGACACAGCATACACACTTAC 59.821 40.000 0.00 0.00 0.00 2.34
3624 3858 5.304778 ACAATGACACAGCATACACACTTA 58.695 37.500 0.00 0.00 0.00 2.24
3625 3859 4.136796 ACAATGACACAGCATACACACTT 58.863 39.130 0.00 0.00 0.00 3.16
3626 3860 3.743521 ACAATGACACAGCATACACACT 58.256 40.909 0.00 0.00 0.00 3.55
3627 3861 5.605564 TTACAATGACACAGCATACACAC 57.394 39.130 0.00 0.00 0.00 3.82
3660 3894 5.062308 GCTACAACATTAACAGAGAAGACCG 59.938 44.000 0.00 0.00 0.00 4.79
3857 4113 8.243961 AGTAACAAGACTGACTAGCATATGAT 57.756 34.615 6.97 1.82 0.00 2.45
3860 4116 7.976734 GTGAAGTAACAAGACTGACTAGCATAT 59.023 37.037 0.00 0.00 0.00 1.78
3920 4176 8.677148 AAATAGACAGTGAAGAAAAGCTACAA 57.323 30.769 0.00 0.00 0.00 2.41
3998 4254 9.961265 CATTCGGATCTAAGTTTATACTGTACA 57.039 33.333 0.00 0.00 34.01 2.90
4018 4276 5.824904 AATCAAACAGGAAGATCATTCGG 57.175 39.130 0.00 0.00 0.00 4.30
4027 4285 5.143376 AGATGGCAAAATCAAACAGGAAG 57.857 39.130 0.00 0.00 0.00 3.46
4115 4470 9.758651 AGTGGATTTAGTAAATTTTTGTCCAAC 57.241 29.630 12.74 8.81 0.00 3.77
4331 4862 6.204688 TGATCAATGGTATTAGGCAAACGATC 59.795 38.462 0.00 0.00 0.00 3.69
4461 5075 4.321230 GCTGGTTTTCAACACAAGGGATAG 60.321 45.833 0.00 0.00 0.00 2.08
4501 5115 0.519519 TCCAACAGCGTAATTTGCGG 59.480 50.000 8.93 3.31 37.44 5.69
4507 5121 4.154195 GTGAGAATGTTCCAACAGCGTAAT 59.846 41.667 0.00 0.00 43.04 1.89
4508 5122 3.496884 GTGAGAATGTTCCAACAGCGTAA 59.503 43.478 0.00 0.00 43.04 3.18
4510 5124 1.873591 GTGAGAATGTTCCAACAGCGT 59.126 47.619 0.00 0.00 43.04 5.07
4511 5125 1.197721 GGTGAGAATGTTCCAACAGCG 59.802 52.381 0.00 0.00 43.04 5.18
4512 5126 2.229792 TGGTGAGAATGTTCCAACAGC 58.770 47.619 0.00 0.00 43.04 4.40
4513 5127 5.242393 AGAATTGGTGAGAATGTTCCAACAG 59.758 40.000 0.00 0.00 43.04 3.16
4606 5514 4.876107 ACAAGACTGCAATTAGGGTTATCG 59.124 41.667 0.00 0.00 0.00 2.92
4768 5682 8.815565 TTGCCAACAGTTCATATTATAGGAAA 57.184 30.769 0.71 0.00 29.56 3.13
4949 5865 6.569179 TTGGTCTGTAGCCTTTGAAATTAC 57.431 37.500 0.00 0.00 0.00 1.89
5028 5944 4.342862 TCAGGGAATGAGCTAGCATTAC 57.657 45.455 18.83 9.45 38.53 1.89
5035 5951 3.939740 ATTGCTTCAGGGAATGAGCTA 57.060 42.857 0.00 0.00 39.68 3.32
5089 6005 3.122297 CAAGCCATTGCAAAAACGAGAA 58.878 40.909 1.71 0.00 41.13 2.87
5182 6098 3.812167 GCCAGAGAAAACCACCTTCAGAT 60.812 47.826 0.00 0.00 0.00 2.90
5273 6189 4.509616 TCGGTTGTTGAAGAAGTTGAAGA 58.490 39.130 0.00 0.00 0.00 2.87
5285 6201 4.920640 TTAATTTTGGCTCGGTTGTTGA 57.079 36.364 0.00 0.00 0.00 3.18
5296 6212 7.771183 TCTCTACATCACCATTTAATTTTGGC 58.229 34.615 2.60 0.00 36.41 4.52
5511 6437 3.943381 TGGATGTGCAGATTGATCTTCAC 59.057 43.478 14.28 14.28 46.58 3.18
5545 6471 4.540824 GTCTGTTTCTTTCATGCAAGTCC 58.459 43.478 4.99 0.00 0.00 3.85
5552 6478 7.487189 GCAAAGATATGGTCTGTTTCTTTCATG 59.513 37.037 0.00 0.00 37.23 3.07
5553 6479 7.177216 TGCAAAGATATGGTCTGTTTCTTTCAT 59.823 33.333 0.00 0.00 37.23 2.57
5623 6549 8.753497 ATGTCATACTCTGATAGTAGTGAACA 57.247 34.615 0.00 0.00 43.90 3.18
5656 6585 5.506317 GCAAACTGATCAGTAAGCAACAACT 60.506 40.000 31.62 13.43 41.58 3.16
5682 6611 5.931146 AGAAACAAACAAACATGTCAGCAAA 59.069 32.000 0.00 0.00 0.00 3.68
5683 6612 5.477510 AGAAACAAACAAACATGTCAGCAA 58.522 33.333 0.00 0.00 0.00 3.91
5684 6613 5.070770 AGAAACAAACAAACATGTCAGCA 57.929 34.783 0.00 0.00 0.00 4.41
5685 6614 6.128580 ACAAAGAAACAAACAAACATGTCAGC 60.129 34.615 0.00 0.00 0.00 4.26
5686 6615 7.350110 ACAAAGAAACAAACAAACATGTCAG 57.650 32.000 0.00 0.00 0.00 3.51
5687 6616 7.721286 AACAAAGAAACAAACAAACATGTCA 57.279 28.000 0.00 0.00 0.00 3.58
5705 6634 4.549458 CCATAGCACACCTTCAAACAAAG 58.451 43.478 0.00 0.00 0.00 2.77
5843 6772 6.374613 CCTCAGGAACTTTTATCCTAAACACC 59.625 42.308 0.00 0.00 45.59 4.16
5934 6863 4.098501 CAGAACAAAGCTCCTGGAGTTTTT 59.901 41.667 28.94 22.64 40.17 1.94
6066 7065 7.456684 TCCATTTCAAACATACAAACAAACG 57.543 32.000 0.00 0.00 0.00 3.60
6125 7124 3.011818 CGGGGTTCAGGGTGTTAAATAC 58.988 50.000 0.00 0.00 0.00 1.89
6150 7149 2.143122 CAAGAAGTACGGCAAAGCAGA 58.857 47.619 0.00 0.00 0.00 4.26
6190 8160 3.306919 CCATGGCCAACAAACATTTAGCT 60.307 43.478 10.96 0.00 0.00 3.32
6192 8162 3.995705 CACCATGGCCAACAAACATTTAG 59.004 43.478 10.96 0.00 0.00 1.85
6267 8237 4.854839 GTGCAAATTATAACCCGTCACAAC 59.145 41.667 0.00 0.00 0.00 3.32
6274 8244 1.268845 GGCGGTGCAAATTATAACCCG 60.269 52.381 2.52 2.52 37.08 5.28
6276 8246 3.119280 ACTTGGCGGTGCAAATTATAACC 60.119 43.478 0.00 0.00 0.00 2.85
6578 8548 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
6579 8549 4.778958 TCTTACTCCCTCCGTTCCAAAATA 59.221 41.667 0.00 0.00 0.00 1.40
6580 8550 3.585732 TCTTACTCCCTCCGTTCCAAAAT 59.414 43.478 0.00 0.00 0.00 1.82
6581 8551 2.974099 TCTTACTCCCTCCGTTCCAAAA 59.026 45.455 0.00 0.00 0.00 2.44
6582 8552 2.612000 TCTTACTCCCTCCGTTCCAAA 58.388 47.619 0.00 0.00 0.00 3.28
6583 8553 2.314071 TCTTACTCCCTCCGTTCCAA 57.686 50.000 0.00 0.00 0.00 3.53
6584 8554 2.301009 GTTTCTTACTCCCTCCGTTCCA 59.699 50.000 0.00 0.00 0.00 3.53
6585 8555 2.301009 TGTTTCTTACTCCCTCCGTTCC 59.699 50.000 0.00 0.00 0.00 3.62
6586 8556 3.243975 TGTGTTTCTTACTCCCTCCGTTC 60.244 47.826 0.00 0.00 0.00 3.95
6587 8557 2.701951 TGTGTTTCTTACTCCCTCCGTT 59.298 45.455 0.00 0.00 0.00 4.44
6588 8558 2.322658 TGTGTTTCTTACTCCCTCCGT 58.677 47.619 0.00 0.00 0.00 4.69
6589 8559 3.396260 TTGTGTTTCTTACTCCCTCCG 57.604 47.619 0.00 0.00 0.00 4.63
6590 8560 5.313712 TGAATTGTGTTTCTTACTCCCTCC 58.686 41.667 0.00 0.00 0.00 4.30
6591 8561 5.998363 ACTGAATTGTGTTTCTTACTCCCTC 59.002 40.000 0.00 0.00 0.00 4.30
6592 8562 5.765182 CACTGAATTGTGTTTCTTACTCCCT 59.235 40.000 0.00 0.00 33.61 4.20
6593 8563 5.763204 TCACTGAATTGTGTTTCTTACTCCC 59.237 40.000 0.00 0.00 38.90 4.30
6594 8564 6.483640 AGTCACTGAATTGTGTTTCTTACTCC 59.516 38.462 0.00 0.00 38.90 3.85
6595 8565 7.348201 CAGTCACTGAATTGTGTTTCTTACTC 58.652 38.462 0.00 0.00 38.90 2.59
6596 8566 6.260936 CCAGTCACTGAATTGTGTTTCTTACT 59.739 38.462 6.30 0.00 38.90 2.24
6597 8567 6.430451 CCAGTCACTGAATTGTGTTTCTTAC 58.570 40.000 6.30 0.00 38.90 2.34
6598 8568 5.008613 GCCAGTCACTGAATTGTGTTTCTTA 59.991 40.000 6.30 0.00 38.90 2.10
6599 8569 4.202050 GCCAGTCACTGAATTGTGTTTCTT 60.202 41.667 6.30 0.00 38.90 2.52
6600 8570 3.316308 GCCAGTCACTGAATTGTGTTTCT 59.684 43.478 6.30 0.00 38.90 2.52
6601 8571 3.316308 AGCCAGTCACTGAATTGTGTTTC 59.684 43.478 6.30 0.00 38.90 2.78
6602 8572 3.290710 AGCCAGTCACTGAATTGTGTTT 58.709 40.909 6.30 0.00 38.90 2.83
6603 8573 2.936202 AGCCAGTCACTGAATTGTGTT 58.064 42.857 6.30 0.00 38.90 3.32
6604 8574 2.620115 CAAGCCAGTCACTGAATTGTGT 59.380 45.455 6.30 0.00 38.90 3.72
6605 8575 2.880268 TCAAGCCAGTCACTGAATTGTG 59.120 45.455 6.30 0.00 39.15 3.33
6606 8576 2.880890 GTCAAGCCAGTCACTGAATTGT 59.119 45.455 6.30 0.00 32.44 2.71
6607 8577 2.880268 TGTCAAGCCAGTCACTGAATTG 59.120 45.455 6.30 10.73 32.44 2.32
6608 8578 3.213206 TGTCAAGCCAGTCACTGAATT 57.787 42.857 6.30 0.00 32.44 2.17
6609 8579 2.936919 TGTCAAGCCAGTCACTGAAT 57.063 45.000 6.30 0.00 32.44 2.57
6610 8580 2.708216 TTGTCAAGCCAGTCACTGAA 57.292 45.000 6.30 0.00 32.44 3.02
6611 8581 2.104622 TGATTGTCAAGCCAGTCACTGA 59.895 45.455 6.30 0.00 32.44 3.41
6612 8582 2.497138 TGATTGTCAAGCCAGTCACTG 58.503 47.619 0.00 0.00 0.00 3.66
6613 8583 2.936919 TGATTGTCAAGCCAGTCACT 57.063 45.000 0.00 0.00 0.00 3.41
6614 8584 5.824904 ATATTGATTGTCAAGCCAGTCAC 57.175 39.130 0.00 0.00 40.05 3.67
6615 8585 6.839124 AAATATTGATTGTCAAGCCAGTCA 57.161 33.333 0.00 0.00 40.05 3.41
6637 8607 8.825667 AGACAACTGCTTAAAAACAAGAAAAA 57.174 26.923 0.00 0.00 0.00 1.94
6638 8608 8.825667 AAGACAACTGCTTAAAAACAAGAAAA 57.174 26.923 0.00 0.00 0.00 2.29
6643 8613 8.599774 GCAAATAAGACAACTGCTTAAAAACAA 58.400 29.630 0.00 0.00 32.16 2.83
6644 8614 7.761704 TGCAAATAAGACAACTGCTTAAAAACA 59.238 29.630 0.00 0.00 34.10 2.83
6645 8615 8.125728 TGCAAATAAGACAACTGCTTAAAAAC 57.874 30.769 0.00 0.00 34.10 2.43
6646 8616 8.194104 TCTGCAAATAAGACAACTGCTTAAAAA 58.806 29.630 0.00 0.00 34.10 1.94
6647 8617 7.711846 TCTGCAAATAAGACAACTGCTTAAAA 58.288 30.769 0.00 0.00 34.10 1.52
6648 8618 7.270757 TCTGCAAATAAGACAACTGCTTAAA 57.729 32.000 0.00 0.00 34.10 1.52
6649 8619 6.875948 TCTGCAAATAAGACAACTGCTTAA 57.124 33.333 0.00 0.00 34.10 1.85
6650 8620 7.391554 AGAATCTGCAAATAAGACAACTGCTTA 59.608 33.333 0.00 0.00 34.10 3.09
6651 8621 5.972107 ATCTGCAAATAAGACAACTGCTT 57.028 34.783 0.00 0.00 34.10 3.91
6652 8622 5.709164 AGAATCTGCAAATAAGACAACTGCT 59.291 36.000 0.00 0.00 34.10 4.24
6653 8623 5.947443 AGAATCTGCAAATAAGACAACTGC 58.053 37.500 0.00 0.00 0.00 4.40
6654 8624 9.713740 GATAAGAATCTGCAAATAAGACAACTG 57.286 33.333 0.00 0.00 0.00 3.16
6655 8625 8.897752 GGATAAGAATCTGCAAATAAGACAACT 58.102 33.333 0.00 0.00 32.29 3.16
6656 8626 8.677300 TGGATAAGAATCTGCAAATAAGACAAC 58.323 33.333 0.00 0.00 32.29 3.32
6657 8627 8.806429 TGGATAAGAATCTGCAAATAAGACAA 57.194 30.769 0.00 0.00 32.29 3.18
6658 8628 8.985315 ATGGATAAGAATCTGCAAATAAGACA 57.015 30.769 0.00 0.00 32.29 3.41
6659 8629 8.510505 GGATGGATAAGAATCTGCAAATAAGAC 58.489 37.037 0.00 0.00 32.29 3.01
6660 8630 8.443176 AGGATGGATAAGAATCTGCAAATAAGA 58.557 33.333 0.00 0.00 32.29 2.10
6661 8631 8.632906 AGGATGGATAAGAATCTGCAAATAAG 57.367 34.615 0.00 0.00 32.29 1.73
6662 8632 8.853126 CAAGGATGGATAAGAATCTGCAAATAA 58.147 33.333 0.00 0.00 32.29 1.40
6663 8633 8.000709 ACAAGGATGGATAAGAATCTGCAAATA 58.999 33.333 0.00 0.00 32.29 1.40
6664 8634 6.837568 ACAAGGATGGATAAGAATCTGCAAAT 59.162 34.615 0.00 0.00 32.29 2.32
6665 8635 6.189859 ACAAGGATGGATAAGAATCTGCAAA 58.810 36.000 0.00 0.00 32.29 3.68
6666 8636 5.759059 ACAAGGATGGATAAGAATCTGCAA 58.241 37.500 0.00 0.00 32.29 4.08
6667 8637 5.378230 ACAAGGATGGATAAGAATCTGCA 57.622 39.130 0.00 0.00 32.29 4.41
6668 8638 7.807977 TTTACAAGGATGGATAAGAATCTGC 57.192 36.000 0.00 0.00 32.29 4.26
6708 8678 8.352942 GCGGAAAATCCTCACAATATTTTCTAT 58.647 33.333 15.43 0.00 43.90 1.98
6709 8679 7.338196 TGCGGAAAATCCTCACAATATTTTCTA 59.662 33.333 15.43 4.75 43.90 2.10
6710 8680 6.152661 TGCGGAAAATCCTCACAATATTTTCT 59.847 34.615 15.43 0.00 43.90 2.52
6711 8681 6.329496 TGCGGAAAATCCTCACAATATTTTC 58.671 36.000 9.99 9.99 43.78 2.29
6712 8682 6.279513 TGCGGAAAATCCTCACAATATTTT 57.720 33.333 0.00 0.00 35.95 1.82
6713 8683 5.913137 TGCGGAAAATCCTCACAATATTT 57.087 34.783 0.00 0.00 33.30 1.40
6721 8691 3.194861 CGAATAGTGCGGAAAATCCTCA 58.805 45.455 0.00 0.00 33.30 3.86
6722 8692 3.861569 CGAATAGTGCGGAAAATCCTC 57.138 47.619 0.00 0.00 33.30 3.71
6732 8702 1.533756 CCATTTTGGCCGAATAGTGCG 60.534 52.381 6.16 0.00 0.00 5.34
6733 8703 2.208326 CCATTTTGGCCGAATAGTGC 57.792 50.000 6.16 0.00 0.00 4.40
6744 8714 4.034279 CACAAAGTGAACTTGCCATTTTGG 59.966 41.667 13.07 0.00 42.07 3.28
6745 8715 4.869297 TCACAAAGTGAACTTGCCATTTTG 59.131 37.500 0.00 0.00 42.85 2.44
6746 8716 5.083533 TCACAAAGTGAACTTGCCATTTT 57.916 34.783 0.00 0.00 39.78 1.82
6747 8717 4.441913 CCTCACAAAGTGAACTTGCCATTT 60.442 41.667 1.19 0.00 42.26 2.32
6748 8718 3.068590 CCTCACAAAGTGAACTTGCCATT 59.931 43.478 1.19 0.00 42.26 3.16
6749 8719 2.624838 CCTCACAAAGTGAACTTGCCAT 59.375 45.455 1.19 0.00 42.26 4.40
6750 8720 2.023673 CCTCACAAAGTGAACTTGCCA 58.976 47.619 1.19 0.00 42.26 4.92
6751 8721 2.291741 CTCCTCACAAAGTGAACTTGCC 59.708 50.000 1.19 0.00 42.26 4.52
6752 8722 2.945668 ACTCCTCACAAAGTGAACTTGC 59.054 45.455 1.19 0.00 42.26 4.01
6753 8723 5.123820 TGAAACTCCTCACAAAGTGAACTTG 59.876 40.000 1.19 0.00 42.26 3.16
6754 8724 5.123979 GTGAAACTCCTCACAAAGTGAACTT 59.876 40.000 1.19 0.00 44.32 2.66
6755 8725 4.636206 GTGAAACTCCTCACAAAGTGAACT 59.364 41.667 1.19 0.00 44.32 3.01
6756 8726 4.909894 GTGAAACTCCTCACAAAGTGAAC 58.090 43.478 1.19 0.00 44.32 3.18
6772 8742 6.131544 TCTCAGCAAAACCTTTAGTGAAAC 57.868 37.500 0.00 0.00 0.00 2.78
6773 8743 6.767524 TTCTCAGCAAAACCTTTAGTGAAA 57.232 33.333 0.00 0.00 0.00 2.69
6774 8744 6.767524 TTTCTCAGCAAAACCTTTAGTGAA 57.232 33.333 0.00 0.00 0.00 3.18
6775 8745 6.377327 CTTTCTCAGCAAAACCTTTAGTGA 57.623 37.500 0.00 0.00 0.00 3.41
6790 8760 4.759183 ACTAGGCTTTCTTTGCTTTCTCAG 59.241 41.667 0.00 0.00 0.00 3.35
6791 8761 4.718961 ACTAGGCTTTCTTTGCTTTCTCA 58.281 39.130 0.00 0.00 0.00 3.27
6792 8762 6.166982 TCTACTAGGCTTTCTTTGCTTTCTC 58.833 40.000 0.00 0.00 0.00 2.87
6793 8763 6.115448 TCTACTAGGCTTTCTTTGCTTTCT 57.885 37.500 0.00 0.00 0.00 2.52
6794 8764 6.037720 GGATCTACTAGGCTTTCTTTGCTTTC 59.962 42.308 0.00 0.00 0.00 2.62
6795 8765 5.883115 GGATCTACTAGGCTTTCTTTGCTTT 59.117 40.000 0.00 0.00 0.00 3.51
6796 8766 5.432645 GGATCTACTAGGCTTTCTTTGCTT 58.567 41.667 0.00 0.00 0.00 3.91
6797 8767 4.442192 CGGATCTACTAGGCTTTCTTTGCT 60.442 45.833 0.00 0.00 0.00 3.91
6798 8768 3.804873 CGGATCTACTAGGCTTTCTTTGC 59.195 47.826 0.00 0.00 0.00 3.68
6799 8769 3.804873 GCGGATCTACTAGGCTTTCTTTG 59.195 47.826 0.00 0.00 0.00 2.77
6800 8770 3.707102 AGCGGATCTACTAGGCTTTCTTT 59.293 43.478 0.00 0.00 0.00 2.52
6801 8771 3.301274 AGCGGATCTACTAGGCTTTCTT 58.699 45.455 0.00 0.00 0.00 2.52
6802 8772 2.952116 AGCGGATCTACTAGGCTTTCT 58.048 47.619 0.00 0.00 0.00 2.52
6803 8773 4.850347 TTAGCGGATCTACTAGGCTTTC 57.150 45.455 0.00 0.00 35.28 2.62
6804 8774 5.128991 AGTTTTAGCGGATCTACTAGGCTTT 59.871 40.000 0.00 0.00 35.28 3.51
6805 8775 4.650131 AGTTTTAGCGGATCTACTAGGCTT 59.350 41.667 0.00 0.00 35.28 4.35
6806 8776 4.216708 AGTTTTAGCGGATCTACTAGGCT 58.783 43.478 0.00 0.00 37.73 4.58
6807 8777 4.548494 GAGTTTTAGCGGATCTACTAGGC 58.452 47.826 0.00 0.00 0.00 3.93
6808 8778 4.785417 CGAGTTTTAGCGGATCTACTAGG 58.215 47.826 0.00 0.00 0.00 3.02
6819 8789 1.705256 TGCAGTACCGAGTTTTAGCG 58.295 50.000 0.00 0.00 0.00 4.26
6820 8790 4.216731 GTTTTGCAGTACCGAGTTTTAGC 58.783 43.478 0.00 0.00 0.00 3.09
6821 8791 4.209703 TCGTTTTGCAGTACCGAGTTTTAG 59.790 41.667 0.00 0.00 0.00 1.85
6822 8792 4.118410 TCGTTTTGCAGTACCGAGTTTTA 58.882 39.130 0.00 0.00 0.00 1.52
6823 8793 2.937799 TCGTTTTGCAGTACCGAGTTTT 59.062 40.909 0.00 0.00 0.00 2.43
6824 8794 2.553086 TCGTTTTGCAGTACCGAGTTT 58.447 42.857 0.00 0.00 0.00 2.66
6825 8795 2.228138 TCGTTTTGCAGTACCGAGTT 57.772 45.000 0.00 0.00 0.00 3.01
6826 8796 2.450609 ATCGTTTTGCAGTACCGAGT 57.549 45.000 6.13 0.00 0.00 4.18
6827 8797 3.806316 AAATCGTTTTGCAGTACCGAG 57.194 42.857 6.13 0.00 0.00 4.63
6828 8798 3.879427 CAAAATCGTTTTGCAGTACCGA 58.121 40.909 9.26 3.01 42.91 4.69
6838 8808 1.065851 ACGTTCCCGCAAAATCGTTTT 59.934 42.857 0.00 0.00 37.70 2.43
6839 8809 0.664224 ACGTTCCCGCAAAATCGTTT 59.336 45.000 0.00 0.00 37.70 3.60
6840 8810 0.040781 CACGTTCCCGCAAAATCGTT 60.041 50.000 0.00 0.00 37.70 3.85
6841 8811 0.881159 TCACGTTCCCGCAAAATCGT 60.881 50.000 0.00 0.00 37.70 3.73
6842 8812 0.236187 TTCACGTTCCCGCAAAATCG 59.764 50.000 0.00 0.00 37.70 3.34
6843 8813 1.401018 CCTTCACGTTCCCGCAAAATC 60.401 52.381 0.00 0.00 37.70 2.17
6844 8814 0.596082 CCTTCACGTTCCCGCAAAAT 59.404 50.000 0.00 0.00 37.70 1.82
6845 8815 2.026522 CCTTCACGTTCCCGCAAAA 58.973 52.632 0.00 0.00 37.70 2.44
6846 8816 2.548295 GCCTTCACGTTCCCGCAAA 61.548 57.895 0.00 0.00 37.70 3.68
6847 8817 2.975799 GCCTTCACGTTCCCGCAA 60.976 61.111 0.00 0.00 37.70 4.85
6851 8821 4.735358 GGGGGCCTTCACGTTCCC 62.735 72.222 0.84 0.00 38.03 3.97
6852 8822 3.961414 TGGGGGCCTTCACGTTCC 61.961 66.667 0.84 0.00 0.00 3.62
6853 8823 2.671963 GTGGGGGCCTTCACGTTC 60.672 66.667 0.84 0.00 0.00 3.95
6857 8827 3.961414 TTCCGTGGGGGCCTTCAC 61.961 66.667 16.69 16.69 34.94 3.18
6858 8828 3.961414 GTTCCGTGGGGGCCTTCA 61.961 66.667 0.84 0.00 34.94 3.02
6859 8829 3.647771 AGTTCCGTGGGGGCCTTC 61.648 66.667 0.84 0.00 34.94 3.46
6860 8830 3.966543 CAGTTCCGTGGGGGCCTT 61.967 66.667 0.84 0.00 34.94 4.35
6861 8831 4.974438 TCAGTTCCGTGGGGGCCT 62.974 66.667 0.84 0.00 34.94 5.19
6862 8832 3.699134 GATCAGTTCCGTGGGGGCC 62.699 68.421 0.00 0.00 34.94 5.80
6863 8833 2.124695 GATCAGTTCCGTGGGGGC 60.125 66.667 0.00 0.00 34.94 5.80
6864 8834 2.590092 GGATCAGTTCCGTGGGGG 59.410 66.667 0.00 0.00 33.93 5.40
6871 8841 4.872664 ACGAGATTTATCGGATCAGTTCC 58.127 43.478 0.00 0.00 46.91 3.62
6872 8842 6.670233 AGTACGAGATTTATCGGATCAGTTC 58.330 40.000 0.00 0.00 46.91 3.01
6873 8843 6.636562 AGTACGAGATTTATCGGATCAGTT 57.363 37.500 0.00 0.00 46.91 3.16
6874 8844 6.262496 TGAAGTACGAGATTTATCGGATCAGT 59.738 38.462 0.00 0.00 46.91 3.41
6875 8845 6.669278 TGAAGTACGAGATTTATCGGATCAG 58.331 40.000 0.00 0.00 46.91 2.90
6876 8846 6.628919 TGAAGTACGAGATTTATCGGATCA 57.371 37.500 0.00 0.00 46.91 2.92
6877 8847 7.925703 TTTGAAGTACGAGATTTATCGGATC 57.074 36.000 0.00 0.00 46.91 3.36
6878 8848 8.888579 AATTTGAAGTACGAGATTTATCGGAT 57.111 30.769 0.00 0.00 46.91 4.18
6879 8849 8.712285 AAATTTGAAGTACGAGATTTATCGGA 57.288 30.769 0.00 0.00 46.91 4.55
6888 8858 9.706691 AGATGTTTCTAAATTTGAAGTACGAGA 57.293 29.630 0.00 0.00 0.00 4.04
6889 8859 9.959775 GAGATGTTTCTAAATTTGAAGTACGAG 57.040 33.333 0.00 0.00 30.30 4.18
6890 8860 8.932791 GGAGATGTTTCTAAATTTGAAGTACGA 58.067 33.333 0.00 0.00 30.30 3.43
6891 8861 8.175716 GGGAGATGTTTCTAAATTTGAAGTACG 58.824 37.037 0.00 0.00 30.30 3.67
6892 8862 8.459635 GGGGAGATGTTTCTAAATTTGAAGTAC 58.540 37.037 0.00 0.82 30.30 2.73
6893 8863 8.167392 TGGGGAGATGTTTCTAAATTTGAAGTA 58.833 33.333 0.00 0.00 30.30 2.24
6894 8864 7.010160 TGGGGAGATGTTTCTAAATTTGAAGT 58.990 34.615 0.00 0.00 30.30 3.01
6895 8865 7.466746 TGGGGAGATGTTTCTAAATTTGAAG 57.533 36.000 0.00 0.00 30.30 3.02
6896 8866 8.434589 AATGGGGAGATGTTTCTAAATTTGAA 57.565 30.769 0.00 0.23 30.30 2.69
6897 8867 9.189156 CTAATGGGGAGATGTTTCTAAATTTGA 57.811 33.333 0.00 0.00 30.30 2.69
6898 8868 9.189156 TCTAATGGGGAGATGTTTCTAAATTTG 57.811 33.333 0.00 0.00 30.30 2.32
6899 8869 9.768215 TTCTAATGGGGAGATGTTTCTAAATTT 57.232 29.630 0.00 0.00 30.30 1.82
6900 8870 9.768215 TTTCTAATGGGGAGATGTTTCTAAATT 57.232 29.630 0.00 0.00 30.30 1.82
6901 8871 9.768215 TTTTCTAATGGGGAGATGTTTCTAAAT 57.232 29.630 0.00 0.00 30.30 1.40
6902 8872 9.768215 ATTTTCTAATGGGGAGATGTTTCTAAA 57.232 29.630 0.00 0.00 30.30 1.85
6905 8875 8.986929 CTATTTTCTAATGGGGAGATGTTTCT 57.013 34.615 0.00 0.00 33.88 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.