Multiple sequence alignment - TraesCS5A01G158600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G158600 chr5A 100.000 6470 0 0 1 6470 338411009 338417478 0.000000e+00 11948.0
1 TraesCS5A01G158600 chr5A 84.916 1432 175 27 4799 6212 338258488 338259896 0.000000e+00 1410.0
2 TraesCS5A01G158600 chr5A 82.918 1604 198 37 4799 6364 338292551 338294116 0.000000e+00 1375.0
3 TraesCS5A01G158600 chr5A 83.181 1207 123 36 188 1331 338247259 338248448 0.000000e+00 1031.0
4 TraesCS5A01G158600 chr5A 86.574 931 105 16 2293 3217 338290156 338291072 0.000000e+00 1009.0
5 TraesCS5A01G158600 chr5A 82.613 1110 127 29 286 1331 338288167 338289274 0.000000e+00 920.0
6 TraesCS5A01G158600 chr5A 91.111 405 32 4 2293 2695 338249234 338249636 4.410000e-151 545.0
7 TraesCS5A01G158600 chr5A 86.735 196 24 2 4054 4249 338291925 338292118 3.930000e-52 217.0
8 TraesCS5A01G158600 chr5A 84.541 207 30 2 4054 4260 338257896 338258100 3.060000e-48 204.0
9 TraesCS5A01G158600 chr4B 93.870 1566 82 10 4911 6470 43216330 43214773 0.000000e+00 2348.0
10 TraesCS5A01G158600 chr4B 89.970 1336 91 21 3 1331 43220819 43219520 0.000000e+00 1685.0
11 TraesCS5A01G158600 chr4B 85.924 952 51 37 3972 4881 43217236 43216326 0.000000e+00 939.0
12 TraesCS5A01G158600 chr4B 88.677 733 54 12 2693 3420 43218378 43217670 0.000000e+00 867.0
13 TraesCS5A01G158600 chr4B 85.784 816 65 28 1412 2211 43219523 43218743 0.000000e+00 817.0
14 TraesCS5A01G158600 chr4B 97.059 374 11 0 2293 2666 43218744 43218371 1.180000e-176 630.0
15 TraesCS5A01G158600 chr4B 88.941 425 37 7 3501 3919 43217672 43217252 3.460000e-142 516.0
16 TraesCS5A01G158600 chr4B 92.308 169 12 1 2043 2211 597429133 597429300 8.380000e-59 239.0
17 TraesCS5A01G158600 chr4B 90.991 111 10 0 1931 2041 597426773 597426883 4.040000e-32 150.0
18 TraesCS5A01G158600 chr4B 87.778 90 10 1 3414 3503 14016189 14016277 3.190000e-18 104.0
19 TraesCS5A01G158600 chr4B 88.506 87 9 1 3417 3503 612214248 612214163 3.190000e-18 104.0
20 TraesCS5A01G158600 chr5D 93.874 1567 75 9 4911 6468 255378214 255379768 0.000000e+00 2342.0
21 TraesCS5A01G158600 chr5D 90.562 1335 79 21 3 1331 255373594 255374887 0.000000e+00 1724.0
22 TraesCS5A01G158600 chr5D 88.718 1427 83 37 3501 4879 255376820 255378216 0.000000e+00 1672.0
23 TraesCS5A01G158600 chr5D 84.927 1433 175 25 4799 6212 254851986 254853396 0.000000e+00 1411.0
24 TraesCS5A01G158600 chr5D 83.813 1390 176 30 4799 6156 255081201 255082573 0.000000e+00 1275.0
25 TraesCS5A01G158600 chr5D 84.954 1183 122 27 188 1331 254845527 254846692 0.000000e+00 1147.0
26 TraesCS5A01G158600 chr5D 86.574 931 105 13 2293 3217 255078806 255079722 0.000000e+00 1009.0
27 TraesCS5A01G158600 chr5D 82.417 1109 130 31 286 1331 255076818 255077924 0.000000e+00 907.0
28 TraesCS5A01G158600 chr5D 86.012 815 62 24 1412 2211 255374884 255375661 0.000000e+00 826.0
29 TraesCS5A01G158600 chr5D 88.856 682 32 20 2740 3420 255376184 255376822 0.000000e+00 798.0
30 TraesCS5A01G158600 chr5D 97.035 371 11 0 2293 2663 255375660 255376030 5.510000e-175 625.0
31 TraesCS5A01G158600 chr5D 80.375 800 117 26 1412 2205 254846689 254847454 7.280000e-159 571.0
32 TraesCS5A01G158600 chr5D 91.852 405 29 4 2293 2695 254847459 254847861 4.380000e-156 562.0
33 TraesCS5A01G158600 chr5D 80.695 518 78 12 1693 2206 255078303 255078802 3.660000e-102 383.0
34 TraesCS5A01G158600 chr5D 89.140 221 17 6 4491 4706 255080925 255081143 1.070000e-67 268.0
35 TraesCS5A01G158600 chr5D 86.735 196 24 2 4054 4249 255080576 255080769 3.930000e-52 217.0
36 TraesCS5A01G158600 chr5D 81.781 247 37 4 4054 4300 254851423 254851661 3.960000e-47 200.0
37 TraesCS5A01G158600 chr5D 87.356 87 7 4 3419 3503 554366909 554366993 5.340000e-16 97.1
38 TraesCS5A01G158600 chr5B 93.746 1567 80 6 4911 6470 286865235 286863680 0.000000e+00 2335.0
39 TraesCS5A01G158600 chr5B 90.943 1336 83 20 3 1331 286871045 286869741 0.000000e+00 1762.0
40 TraesCS5A01G158600 chr5B 83.948 1626 199 35 4847 6440 287754520 287752925 0.000000e+00 1500.0
41 TraesCS5A01G158600 chr5B 83.659 1383 185 26 4799 6156 287431802 287430436 0.000000e+00 1264.0
42 TraesCS5A01G158600 chr5B 83.499 1206 120 35 188 1331 287773038 287771850 0.000000e+00 1051.0
43 TraesCS5A01G158600 chr5B 86.574 931 105 13 2293 3217 287434196 287433280 0.000000e+00 1009.0
44 TraesCS5A01G158600 chr5B 87.875 866 39 33 3972 4797 286866313 286865474 0.000000e+00 957.0
45 TraesCS5A01G158600 chr5B 82.401 1108 131 29 286 1331 287436184 287435079 0.000000e+00 907.0
46 TraesCS5A01G158600 chr5B 88.172 744 45 16 2693 3420 286867472 286866756 0.000000e+00 846.0
47 TraesCS5A01G158600 chr5B 83.899 795 76 24 1432 2211 286868594 286867837 0.000000e+00 712.0
48 TraesCS5A01G158600 chr5B 96.524 374 13 0 2293 2666 286867838 286867465 2.560000e-173 619.0
49 TraesCS5A01G158600 chr5B 91.067 403 32 4 2295 2695 287771092 287770692 5.710000e-150 542.0
50 TraesCS5A01G158600 chr5B 87.963 432 37 7 3501 3919 286866758 286866329 4.510000e-136 496.0
51 TraesCS5A01G158600 chr5B 81.238 517 73 15 1696 2206 287434698 287434200 4.700000e-106 396.0
52 TraesCS5A01G158600 chr5B 80.736 462 69 11 1747 2206 287771541 287771098 6.210000e-90 342.0
53 TraesCS5A01G158600 chr5B 88.261 230 26 1 1412 1641 287771853 287771625 2.300000e-69 274.0
54 TraesCS5A01G158600 chr5B 86.224 196 24 3 4054 4249 287432427 287432235 6.570000e-50 209.0
55 TraesCS5A01G158600 chr5B 81.377 247 38 4 4054 4300 287755165 287754927 1.840000e-45 195.0
56 TraesCS5A01G158600 chr5B 97.778 90 2 0 2207 2296 296852575 296852664 8.690000e-34 156.0
57 TraesCS5A01G158600 chr5B 83.099 71 11 1 1346 1415 652523039 652523109 5.420000e-06 63.9
58 TraesCS5A01G158600 chr7B 81.045 2200 293 80 4051 6169 645502979 645500823 0.000000e+00 1639.0
59 TraesCS5A01G158600 chr7B 83.498 812 98 24 1420 2208 646048615 646047817 0.000000e+00 725.0
60 TraesCS5A01G158600 chr7B 83.090 822 110 21 1412 2211 645505607 645504793 0.000000e+00 721.0
61 TraesCS5A01G158600 chr7B 83.049 820 110 24 1412 2211 645593260 645592450 0.000000e+00 717.0
62 TraesCS5A01G158600 chr7B 85.927 604 55 15 2822 3420 646047262 646046684 9.220000e-173 617.0
63 TraesCS5A01G158600 chr7B 86.308 577 40 13 2852 3420 645591863 645591318 5.590000e-165 592.0
64 TraesCS5A01G158600 chr7B 87.135 513 57 7 827 1331 645593768 645593257 2.020000e-159 573.0
65 TraesCS5A01G158600 chr7B 84.899 596 57 20 2828 3416 645503654 645503085 7.280000e-159 571.0
66 TraesCS5A01G158600 chr7B 84.629 579 76 9 765 1331 645506181 645505604 1.220000e-156 564.0
67 TraesCS5A01G158600 chr7B 80.537 745 96 30 4047 4756 645590874 645590144 1.600000e-145 527.0
68 TraesCS5A01G158600 chr7B 84.935 385 56 2 4834 5218 646045501 646045119 7.870000e-104 388.0
69 TraesCS5A01G158600 chr7B 78.529 680 83 33 4047 4707 646046231 646045596 7.870000e-104 388.0
70 TraesCS5A01G158600 chr7B 84.450 373 50 5 5822 6191 646044297 646043930 1.710000e-95 361.0
71 TraesCS5A01G158600 chr7B 95.652 46 2 0 1370 1415 63558110 63558065 2.500000e-09 75.0
72 TraesCS5A01G158600 chr7D 81.150 1756 256 45 4458 6164 579791372 579789643 0.000000e+00 1339.0
73 TraesCS5A01G158600 chr7D 84.355 799 96 18 1418 2211 579793621 579792847 0.000000e+00 756.0
74 TraesCS5A01G158600 chr7D 86.482 614 52 17 2812 3416 579792380 579791789 0.000000e+00 645.0
75 TraesCS5A01G158600 chr7D 95.745 94 4 0 2205 2298 426558894 426558987 1.120000e-32 152.0
76 TraesCS5A01G158600 chr7D 94.792 96 5 0 2207 2302 141292085 141292180 4.040000e-32 150.0
77 TraesCS5A01G158600 chr7D 91.509 106 7 2 2192 2297 448931417 448931314 1.880000e-30 145.0
78 TraesCS5A01G158600 chr7D 97.826 46 1 0 1370 1415 104892078 104892033 5.380000e-11 80.5
79 TraesCS5A01G158600 chr7A 82.480 1387 193 33 4834 6191 671447504 671446139 0.000000e+00 1170.0
80 TraesCS5A01G158600 chr7A 83.947 1140 132 37 2299 3424 671449790 671448688 0.000000e+00 1044.0
81 TraesCS5A01G158600 chr7A 82.403 1182 149 38 191 1331 671451777 671450614 0.000000e+00 976.0
82 TraesCS5A01G158600 chr7A 81.446 830 117 26 1412 2211 671450617 671449795 0.000000e+00 645.0
83 TraesCS5A01G158600 chr7A 80.718 752 100 27 4047 4765 671448276 671447537 1.590000e-150 544.0
84 TraesCS5A01G158600 chr2D 97.753 89 2 0 2210 2298 378043178 378043090 3.120000e-33 154.0
85 TraesCS5A01G158600 chr2D 90.741 54 5 0 1358 1411 16576461 16576408 9.000000e-09 73.1
86 TraesCS5A01G158600 chr3A 94.059 101 5 1 2206 2306 750350994 750351093 1.120000e-32 152.0
87 TraesCS5A01G158600 chr3A 87.059 85 11 0 3423 3507 419336176 419336092 5.340000e-16 97.1
88 TraesCS5A01G158600 chr1D 94.898 98 4 1 2206 2302 440050447 440050350 1.120000e-32 152.0
89 TraesCS5A01G158600 chr2B 94.845 97 4 1 2210 2306 63783726 63783821 4.040000e-32 150.0
90 TraesCS5A01G158600 chr2B 89.412 85 8 1 3418 3502 632567401 632567318 8.870000e-19 106.0
91 TraesCS5A01G158600 chr3D 91.509 106 8 1 2210 2315 26166864 26166760 1.880000e-30 145.0
92 TraesCS5A01G158600 chr3D 87.640 89 10 1 3414 3502 372318731 372318644 1.150000e-17 102.0
93 TraesCS5A01G158600 chr1B 90.698 86 8 0 3418 3503 402110364 402110449 1.470000e-21 115.0
94 TraesCS5A01G158600 chr1B 86.517 89 9 3 1328 1415 18211123 18211209 1.920000e-15 95.3
95 TraesCS5A01G158600 chr2A 88.636 88 8 2 1335 1420 779873930 779874017 8.870000e-19 106.0
96 TraesCS5A01G158600 chrUn 87.209 86 9 2 3418 3502 42479240 42479324 5.340000e-16 97.1
97 TraesCS5A01G158600 chr3B 87.059 85 11 0 3418 3502 760593437 760593353 5.340000e-16 97.1
98 TraesCS5A01G158600 chr6D 88.136 59 5 2 1358 1415 446418436 446418379 1.160000e-07 69.4
99 TraesCS5A01G158600 chr4D 91.837 49 4 0 1370 1418 361361668 361361620 1.160000e-07 69.4
100 TraesCS5A01G158600 chr6B 86.441 59 8 0 1358 1416 6147449 6147391 1.510000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G158600 chr5A 338411009 338417478 6469 False 11948.000000 11948 100.000000 1 6470 1 chr5A.!!$F1 6469
1 TraesCS5A01G158600 chr5A 338288167 338294116 5949 False 880.250000 1375 84.710000 286 6364 4 chr5A.!!$F4 6078
2 TraesCS5A01G158600 chr5A 338257896 338259896 2000 False 807.000000 1410 84.728500 4054 6212 2 chr5A.!!$F3 2158
3 TraesCS5A01G158600 chr5A 338247259 338249636 2377 False 788.000000 1031 87.146000 188 2695 2 chr5A.!!$F2 2507
4 TraesCS5A01G158600 chr4B 43214773 43220819 6046 True 1114.571429 2348 90.032143 3 6470 7 chr4B.!!$R2 6467
5 TraesCS5A01G158600 chr5D 255373594 255379768 6174 False 1331.166667 2342 90.842833 3 6468 6 chr5D.!!$F4 6465
6 TraesCS5A01G158600 chr5D 254845527 254853396 7869 False 778.200000 1411 84.777800 188 6212 5 chr5D.!!$F2 6024
7 TraesCS5A01G158600 chr5D 255076818 255082573 5755 False 676.500000 1275 84.895667 286 6156 6 chr5D.!!$F3 5870
8 TraesCS5A01G158600 chr5B 286863680 286871045 7365 True 1103.857143 2335 89.874571 3 6470 7 chr5B.!!$R1 6467
9 TraesCS5A01G158600 chr5B 287752925 287755165 2240 True 847.500000 1500 82.662500 4054 6440 2 chr5B.!!$R3 2386
10 TraesCS5A01G158600 chr5B 287430436 287436184 5748 True 757.000000 1264 84.019200 286 6156 5 chr5B.!!$R2 5870
11 TraesCS5A01G158600 chr5B 287770692 287773038 2346 True 552.250000 1051 85.890750 188 2695 4 chr5B.!!$R4 2507
12 TraesCS5A01G158600 chr7B 645500823 645506181 5358 True 873.750000 1639 83.415750 765 6169 4 chr7B.!!$R2 5404
13 TraesCS5A01G158600 chr7B 645590144 645593768 3624 True 602.250000 717 84.257250 827 4756 4 chr7B.!!$R3 3929
14 TraesCS5A01G158600 chr7B 646043930 646048615 4685 True 495.800000 725 83.467800 1420 6191 5 chr7B.!!$R4 4771
15 TraesCS5A01G158600 chr7D 579789643 579793621 3978 True 913.333333 1339 83.995667 1418 6164 3 chr7D.!!$R3 4746
16 TraesCS5A01G158600 chr7A 671446139 671451777 5638 True 875.800000 1170 82.198800 191 6191 5 chr7A.!!$R1 6000

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
449 464 1.136891 GGCCATGGCAATTAACAGACC 59.863 52.381 36.56 12.09 44.11 3.85 F
2135 3522 1.047034 ACTATGTAGACACCCCCGCC 61.047 60.000 0.00 0.00 0.00 6.13 F
3427 5968 0.107456 ATTGCATGCTACTCCCTCCG 59.893 55.000 20.33 0.00 0.00 4.63 F
3438 5979 0.539901 CTCCCTCCGTCCCACGATAT 60.540 60.000 0.00 0.00 46.05 1.63 F
3439 5980 0.773014 TCCCTCCGTCCCACGATATA 59.227 55.000 0.00 0.00 46.05 0.86 F
3440 5981 1.145531 TCCCTCCGTCCCACGATATAA 59.854 52.381 0.00 0.00 46.05 0.98 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2391 3792 1.000283 CATAAGCGCCGAGAGAATCCT 60.000 52.381 2.29 0.0 33.66 3.24 R
3543 6084 0.035056 GCCTGTTAGTGTGGCCTGAT 60.035 55.000 3.32 0.0 40.71 2.90 R
4469 9287 0.110486 TGGGAGAAAAGTCAGGTGGC 59.890 55.000 0.00 0.0 0.00 5.01 R
5351 10609 1.026182 TGGCATCACCGATTGACAGC 61.026 55.000 0.00 0.0 43.94 4.40 R
5450 10708 8.697507 AAATCTTCATGTGATTAATAGGACCC 57.302 34.615 13.87 0.0 34.19 4.46 R
5528 10809 2.374504 CTCCATGGCAACCTATCTCCAT 59.625 50.000 6.96 0.0 39.72 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.056107 CCTAAACTACAGTGCCACAGCTA 60.056 47.826 0.00 0.00 40.80 3.32
30 31 1.338107 ACAGTGCCACAGCTACAGTA 58.662 50.000 0.00 0.00 40.80 2.74
62 65 9.827411 GGTTAAAGTATCTTTTACAGCTTTCAG 57.173 33.333 11.51 0.00 0.00 3.02
134 137 5.057149 AGTAGAAAGTTTGTACAGGTGCAG 58.943 41.667 21.17 0.00 32.27 4.41
148 151 2.734723 GCAGTCGCACGAGAGCAA 60.735 61.111 10.63 0.00 38.36 3.91
149 152 2.310233 GCAGTCGCACGAGAGCAAA 61.310 57.895 10.63 0.00 38.36 3.68
150 153 1.630244 GCAGTCGCACGAGAGCAAAT 61.630 55.000 10.63 0.00 38.36 2.32
159 162 4.159120 GCACGAGAGCAAATAAAAAGGAC 58.841 43.478 0.00 0.00 0.00 3.85
165 168 5.385198 AGAGCAAATAAAAAGGACCAGTCA 58.615 37.500 0.00 0.00 0.00 3.41
184 187 3.251004 GTCACTAAACAAGGACCAGCTTG 59.749 47.826 0.00 0.00 36.70 4.01
186 189 4.074970 CACTAAACAAGGACCAGCTTGAT 58.925 43.478 0.00 0.00 34.88 2.57
310 325 2.089980 AGCTTGGACTAATTGCTGCTG 58.910 47.619 0.00 0.00 32.32 4.41
449 464 1.136891 GGCCATGGCAATTAACAGACC 59.863 52.381 36.56 12.09 44.11 3.85
519 534 7.947332 TGGGCTTATGCAATACCATCTTTTATA 59.053 33.333 2.72 0.00 41.91 0.98
555 570 3.940221 TCTCTTTAGTCGAGTCAGTAGCC 59.060 47.826 0.00 0.00 0.00 3.93
601 616 1.590591 TGGCTATACCCCAGAAGCAA 58.409 50.000 0.00 0.00 37.83 3.91
612 627 3.010420 CCCAGAAGCAACTAGGTAAAGC 58.990 50.000 0.00 0.00 0.00 3.51
613 628 2.673368 CCAGAAGCAACTAGGTAAAGCG 59.327 50.000 0.00 0.00 0.00 4.68
614 629 3.585862 CAGAAGCAACTAGGTAAAGCGA 58.414 45.455 0.00 0.00 0.00 4.93
615 630 4.184629 CAGAAGCAACTAGGTAAAGCGAT 58.815 43.478 0.00 0.00 0.00 4.58
616 631 4.033358 CAGAAGCAACTAGGTAAAGCGATG 59.967 45.833 0.00 0.00 0.00 3.84
636 655 7.333423 AGCGATGCTGTTGTAGAAACTAATTAA 59.667 33.333 0.00 0.00 37.57 1.40
664 683 3.444034 GGGAAGGAAGCACTAATTCAACC 59.556 47.826 0.00 0.00 0.00 3.77
680 699 7.951530 AATTCAACCACATCAACATTTTCTC 57.048 32.000 0.00 0.00 0.00 2.87
733 767 8.932945 TGAGTCATTCAGATGTTGAGTATAAC 57.067 34.615 0.00 0.00 37.07 1.89
760 845 7.913821 CCAAGTGAAAAGAGTACAAGTAAAACC 59.086 37.037 0.00 0.00 0.00 3.27
905 1009 3.050273 TGCGTTAACATGCATGATTCG 57.950 42.857 32.75 25.40 40.20 3.34
967 1071 6.258727 CCTCATCCACACAGTAACATTATCAC 59.741 42.308 0.00 0.00 0.00 3.06
1009 1113 3.478857 ACTGTCAAACGATGGTGGTTA 57.521 42.857 0.00 0.00 0.00 2.85
1031 1135 2.127271 TCAATCGGTGGCACAATGAT 57.873 45.000 20.82 15.62 44.16 2.45
1075 1179 2.879026 GGAGGTTTCATAATTCCTCGCC 59.121 50.000 0.00 0.00 45.04 5.54
1198 1325 4.990426 GCTAACATTTTCAGTGCCACATTT 59.010 37.500 0.00 0.00 0.00 2.32
1338 1465 4.748277 TGGCATACCAAGTAGTACCTTC 57.252 45.455 0.00 0.00 45.37 3.46
1339 1466 3.453353 TGGCATACCAAGTAGTACCTTCC 59.547 47.826 0.00 0.00 45.37 3.46
1340 1467 3.710165 GGCATACCAAGTAGTACCTTCCT 59.290 47.826 0.00 0.00 35.26 3.36
1341 1468 4.163649 GGCATACCAAGTAGTACCTTCCTT 59.836 45.833 0.00 0.00 35.26 3.36
1342 1469 5.358090 GCATACCAAGTAGTACCTTCCTTC 58.642 45.833 0.00 0.00 0.00 3.46
1343 1470 5.589192 CATACCAAGTAGTACCTTCCTTCG 58.411 45.833 0.00 0.00 0.00 3.79
1344 1471 2.830321 ACCAAGTAGTACCTTCCTTCGG 59.170 50.000 0.00 0.00 0.00 4.30
1345 1472 3.094572 CCAAGTAGTACCTTCCTTCGGA 58.905 50.000 0.00 0.00 0.00 4.55
1346 1473 3.512724 CCAAGTAGTACCTTCCTTCGGAA 59.487 47.826 0.00 0.00 39.66 4.30
1347 1474 4.020839 CCAAGTAGTACCTTCCTTCGGAAA 60.021 45.833 0.00 0.00 41.54 3.13
1348 1475 5.338137 CCAAGTAGTACCTTCCTTCGGAAAT 60.338 44.000 0.00 0.00 41.54 2.17
1349 1476 6.127253 CCAAGTAGTACCTTCCTTCGGAAATA 60.127 42.308 0.00 0.00 41.54 1.40
1350 1477 7.325694 CAAGTAGTACCTTCCTTCGGAAATAA 58.674 38.462 0.00 0.00 41.54 1.40
1351 1478 7.110043 AGTAGTACCTTCCTTCGGAAATAAG 57.890 40.000 0.00 0.00 41.54 1.73
1352 1479 6.666980 AGTAGTACCTTCCTTCGGAAATAAGT 59.333 38.462 0.00 0.00 41.54 2.24
1353 1480 5.731591 AGTACCTTCCTTCGGAAATAAGTG 58.268 41.667 9.56 5.49 41.54 3.16
1354 1481 3.951663 ACCTTCCTTCGGAAATAAGTGG 58.048 45.455 9.56 0.00 41.54 4.00
1355 1482 2.683362 CCTTCCTTCGGAAATAAGTGGC 59.317 50.000 9.56 0.00 41.54 5.01
1356 1483 3.343617 CTTCCTTCGGAAATAAGTGGCA 58.656 45.455 0.00 0.00 41.54 4.92
1357 1484 3.644966 TCCTTCGGAAATAAGTGGCAT 57.355 42.857 0.00 0.00 0.00 4.40
1358 1485 3.278574 TCCTTCGGAAATAAGTGGCATG 58.721 45.455 0.00 0.00 0.00 4.06
1359 1486 2.358898 CCTTCGGAAATAAGTGGCATGG 59.641 50.000 0.00 0.00 0.00 3.66
1360 1487 2.799126 TCGGAAATAAGTGGCATGGT 57.201 45.000 0.00 0.00 0.00 3.55
1361 1488 3.080300 TCGGAAATAAGTGGCATGGTT 57.920 42.857 0.00 0.00 0.00 3.67
1362 1489 3.426615 TCGGAAATAAGTGGCATGGTTT 58.573 40.909 0.00 0.00 0.00 3.27
1363 1490 3.829601 TCGGAAATAAGTGGCATGGTTTT 59.170 39.130 0.00 0.00 0.00 2.43
1364 1491 5.010933 TCGGAAATAAGTGGCATGGTTTTA 58.989 37.500 0.00 0.00 0.00 1.52
1365 1492 5.124776 TCGGAAATAAGTGGCATGGTTTTAG 59.875 40.000 0.00 0.00 0.00 1.85
1366 1493 5.124776 CGGAAATAAGTGGCATGGTTTTAGA 59.875 40.000 0.00 0.00 0.00 2.10
1367 1494 6.183360 CGGAAATAAGTGGCATGGTTTTAGAT 60.183 38.462 0.00 0.00 0.00 1.98
1368 1495 7.203218 GGAAATAAGTGGCATGGTTTTAGATC 58.797 38.462 0.00 0.00 0.00 2.75
1369 1496 7.147915 GGAAATAAGTGGCATGGTTTTAGATCA 60.148 37.037 0.00 0.00 0.00 2.92
1370 1497 7.716799 AATAAGTGGCATGGTTTTAGATCAA 57.283 32.000 0.00 0.00 0.00 2.57
1371 1498 7.716799 ATAAGTGGCATGGTTTTAGATCAAA 57.283 32.000 0.00 0.00 0.00 2.69
1372 1499 6.610075 AAGTGGCATGGTTTTAGATCAAAT 57.390 33.333 0.00 0.00 0.00 2.32
1373 1500 6.610075 AGTGGCATGGTTTTAGATCAAATT 57.390 33.333 0.00 0.00 0.00 1.82
1374 1501 7.008021 AGTGGCATGGTTTTAGATCAAATTT 57.992 32.000 0.00 0.00 0.00 1.82
1375 1502 6.875195 AGTGGCATGGTTTTAGATCAAATTTG 59.125 34.615 12.15 12.15 0.00 2.32
1376 1503 6.873076 GTGGCATGGTTTTAGATCAAATTTGA 59.127 34.615 22.52 22.52 42.14 2.69
1377 1504 7.387397 GTGGCATGGTTTTAGATCAAATTTGAA 59.613 33.333 23.91 5.97 41.13 2.69
1378 1505 7.387397 TGGCATGGTTTTAGATCAAATTTGAAC 59.613 33.333 23.91 20.77 41.13 3.18
1379 1506 7.603784 GGCATGGTTTTAGATCAAATTTGAACT 59.396 33.333 27.52 27.52 42.10 3.01
1380 1507 9.638239 GCATGGTTTTAGATCAAATTTGAACTA 57.362 29.630 25.80 25.80 40.27 2.24
1388 1515 9.672086 TTAGATCAAATTTGAACTAAAACCACG 57.328 29.630 32.21 3.05 44.35 4.94
1389 1516 6.640907 AGATCAAATTTGAACTAAAACCACGC 59.359 34.615 24.63 4.14 38.36 5.34
1390 1517 5.044558 TCAAATTTGAACTAAAACCACGCC 58.955 37.500 18.45 0.00 33.55 5.68
1391 1518 4.657436 AATTTGAACTAAAACCACGCCA 57.343 36.364 0.00 0.00 0.00 5.69
1392 1519 3.423996 TTTGAACTAAAACCACGCCAC 57.576 42.857 0.00 0.00 0.00 5.01
1393 1520 2.335316 TGAACTAAAACCACGCCACT 57.665 45.000 0.00 0.00 0.00 4.00
1394 1521 2.645802 TGAACTAAAACCACGCCACTT 58.354 42.857 0.00 0.00 0.00 3.16
1395 1522 3.806380 TGAACTAAAACCACGCCACTTA 58.194 40.909 0.00 0.00 0.00 2.24
1396 1523 4.391155 TGAACTAAAACCACGCCACTTAT 58.609 39.130 0.00 0.00 0.00 1.73
1397 1524 4.822896 TGAACTAAAACCACGCCACTTATT 59.177 37.500 0.00 0.00 0.00 1.40
1398 1525 5.299782 TGAACTAAAACCACGCCACTTATTT 59.700 36.000 0.00 0.00 0.00 1.40
1399 1526 5.366829 ACTAAAACCACGCCACTTATTTC 57.633 39.130 0.00 0.00 0.00 2.17
1400 1527 5.067954 ACTAAAACCACGCCACTTATTTCT 58.932 37.500 0.00 0.00 0.00 2.52
1401 1528 3.915437 AAACCACGCCACTTATTTCTG 57.085 42.857 0.00 0.00 0.00 3.02
1402 1529 2.851263 ACCACGCCACTTATTTCTGA 57.149 45.000 0.00 0.00 0.00 3.27
1403 1530 3.134574 ACCACGCCACTTATTTCTGAA 57.865 42.857 0.00 0.00 0.00 3.02
1404 1531 2.812011 ACCACGCCACTTATTTCTGAAC 59.188 45.455 0.00 0.00 0.00 3.18
1405 1532 2.159707 CCACGCCACTTATTTCTGAACG 60.160 50.000 0.00 0.00 0.00 3.95
1406 1533 2.073816 ACGCCACTTATTTCTGAACGG 58.926 47.619 0.00 0.00 0.00 4.44
1407 1534 2.289195 ACGCCACTTATTTCTGAACGGA 60.289 45.455 0.00 0.00 0.00 4.69
1408 1535 2.348666 CGCCACTTATTTCTGAACGGAG 59.651 50.000 0.00 0.00 0.00 4.63
1409 1536 2.678336 GCCACTTATTTCTGAACGGAGG 59.322 50.000 0.00 0.00 0.00 4.30
1410 1537 3.270877 CCACTTATTTCTGAACGGAGGG 58.729 50.000 0.00 0.00 0.00 4.30
1411 1538 3.055385 CCACTTATTTCTGAACGGAGGGA 60.055 47.826 0.00 0.00 0.00 4.20
1412 1539 4.184629 CACTTATTTCTGAACGGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
1413 1540 3.838903 ACTTATTTCTGAACGGAGGGAGT 59.161 43.478 0.00 0.00 0.00 3.85
1414 1541 5.021458 ACTTATTTCTGAACGGAGGGAGTA 58.979 41.667 0.00 0.00 0.00 2.59
1415 1542 5.661759 ACTTATTTCTGAACGGAGGGAGTAT 59.338 40.000 0.00 0.00 0.00 2.12
1416 1543 6.156429 ACTTATTTCTGAACGGAGGGAGTATT 59.844 38.462 0.00 0.00 0.00 1.89
1586 2849 7.296628 AGCATTGATTGGGTTTACTTTGTTA 57.703 32.000 0.00 0.00 0.00 2.41
1632 2895 5.633601 GGCTTGACCATTAAAAACAGTAAGC 59.366 40.000 0.00 0.00 38.86 3.09
1635 2898 7.062255 GCTTGACCATTAAAAACAGTAAGCATC 59.938 37.037 0.00 0.00 37.38 3.91
1645 2908 7.878477 AAAACAGTAAGCATCACATGAATTG 57.122 32.000 0.00 0.00 0.00 2.32
1663 2926 9.338291 CATGAATTGTGAACTCAGTCTAAAATG 57.662 33.333 0.00 0.00 0.00 2.32
1664 2927 8.450578 TGAATTGTGAACTCAGTCTAAAATGT 57.549 30.769 0.00 0.00 0.00 2.71
1670 2933 9.856488 TGTGAACTCAGTCTAAAATGTAGTATC 57.144 33.333 0.00 0.00 0.00 2.24
1677 2940 8.568794 TCAGTCTAAAATGTAGTATCTCATCCG 58.431 37.037 0.00 0.00 0.00 4.18
1678 2941 7.810282 CAGTCTAAAATGTAGTATCTCATCCGG 59.190 40.741 0.00 0.00 0.00 5.14
1679 2942 7.724506 AGTCTAAAATGTAGTATCTCATCCGGA 59.275 37.037 6.61 6.61 0.00 5.14
1680 2943 8.024285 GTCTAAAATGTAGTATCTCATCCGGAG 58.976 40.741 11.34 2.05 45.49 4.63
1690 2953 2.941453 TCATCCGGAGAAGAAACGAG 57.059 50.000 11.34 0.00 0.00 4.18
1764 3143 5.888691 TCGCAATGGAGCAAAAATACTTA 57.111 34.783 0.00 0.00 0.00 2.24
1803 3184 6.942532 TCTGTTTGCTCTTGTTAGAAATGT 57.057 33.333 0.00 0.00 0.00 2.71
1857 3238 2.887783 TCCAGGATCTTCTCGTGCTATC 59.112 50.000 0.00 0.00 38.23 2.08
1885 3266 5.588246 TCTCGCAATAATCTTGCCACATTTA 59.412 36.000 4.50 0.00 42.10 1.40
1909 3290 6.418946 AGTGGAAGAAACCAAGATAAGGATC 58.581 40.000 0.00 0.00 41.87 3.36
1999 3380 8.959548 TGAATTCTACATGATGCAACTAAACAT 58.040 29.630 7.05 0.00 0.00 2.71
2004 3385 9.448438 TCTACATGATGCAACTAAACATAACTT 57.552 29.630 0.00 0.00 0.00 2.66
2135 3522 1.047034 ACTATGTAGACACCCCCGCC 61.047 60.000 0.00 0.00 0.00 6.13
2215 3616 3.149981 GCAAGGGCTGATAATTACTCCC 58.850 50.000 5.48 5.48 36.96 4.30
2216 3617 3.181439 GCAAGGGCTGATAATTACTCCCT 60.181 47.826 8.92 8.92 45.44 4.20
2217 3618 4.646572 CAAGGGCTGATAATTACTCCCTC 58.353 47.826 13.10 0.00 42.89 4.30
2218 3619 3.252351 AGGGCTGATAATTACTCCCTCC 58.748 50.000 8.92 0.00 39.81 4.30
2219 3620 2.028020 GGGCTGATAATTACTCCCTCCG 60.028 54.545 0.00 0.00 0.00 4.63
2220 3621 2.633481 GGCTGATAATTACTCCCTCCGT 59.367 50.000 0.00 0.00 0.00 4.69
2221 3622 3.306156 GGCTGATAATTACTCCCTCCGTC 60.306 52.174 0.00 0.00 0.00 4.79
2222 3623 3.306156 GCTGATAATTACTCCCTCCGTCC 60.306 52.174 0.00 0.00 0.00 4.79
2223 3624 3.236896 TGATAATTACTCCCTCCGTCCC 58.763 50.000 0.00 0.00 0.00 4.46
2224 3625 2.852714 TAATTACTCCCTCCGTCCCA 57.147 50.000 0.00 0.00 0.00 4.37
2225 3626 2.191981 AATTACTCCCTCCGTCCCAT 57.808 50.000 0.00 0.00 0.00 4.00
2226 3627 3.339713 AATTACTCCCTCCGTCCCATA 57.660 47.619 0.00 0.00 0.00 2.74
2227 3628 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
2228 3629 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
2229 3630 4.474303 TTACTCCCTCCGTCCCATAATA 57.526 45.455 0.00 0.00 0.00 0.98
2230 3631 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2231 3632 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2232 3633 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2233 3634 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2234 3635 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2235 3636 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
2236 3637 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
2237 3638 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
2238 3639 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
2239 3640 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
2240 3641 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
2241 3642 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
2242 3643 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
2266 3667 8.456904 TTTATACTAGTGTAGTGTCAAAAGCG 57.543 34.615 5.39 0.00 39.81 4.68
2267 3668 3.057734 ACTAGTGTAGTGTCAAAAGCGC 58.942 45.455 0.00 0.00 37.69 5.92
2268 3669 2.240493 AGTGTAGTGTCAAAAGCGCT 57.760 45.000 2.64 2.64 0.00 5.92
2269 3670 2.135933 AGTGTAGTGTCAAAAGCGCTC 58.864 47.619 12.06 0.00 0.00 5.03
2270 3671 2.135933 GTGTAGTGTCAAAAGCGCTCT 58.864 47.619 12.06 3.67 0.00 4.09
2271 3672 2.544267 GTGTAGTGTCAAAAGCGCTCTT 59.456 45.455 12.06 0.00 0.00 2.85
2272 3673 3.739300 GTGTAGTGTCAAAAGCGCTCTTA 59.261 43.478 12.06 0.00 31.02 2.10
2273 3674 4.389077 GTGTAGTGTCAAAAGCGCTCTTAT 59.611 41.667 12.06 0.00 31.02 1.73
2274 3675 5.575606 GTGTAGTGTCAAAAGCGCTCTTATA 59.424 40.000 12.06 0.00 31.02 0.98
2275 3676 6.255887 GTGTAGTGTCAAAAGCGCTCTTATAT 59.744 38.462 12.06 0.00 31.02 0.86
2276 3677 6.816640 TGTAGTGTCAAAAGCGCTCTTATATT 59.183 34.615 12.06 0.00 31.02 1.28
2277 3678 7.977293 TGTAGTGTCAAAAGCGCTCTTATATTA 59.023 33.333 12.06 0.00 31.02 0.98
2278 3679 8.979574 GTAGTGTCAAAAGCGCTCTTATATTAT 58.020 33.333 12.06 0.00 31.02 1.28
2279 3680 7.855545 AGTGTCAAAAGCGCTCTTATATTATG 58.144 34.615 12.06 2.09 31.02 1.90
2280 3681 7.041780 AGTGTCAAAAGCGCTCTTATATTATGG 60.042 37.037 12.06 0.00 31.02 2.74
2281 3682 6.204688 TGTCAAAAGCGCTCTTATATTATGGG 59.795 38.462 12.06 0.00 31.02 4.00
2282 3683 6.426937 GTCAAAAGCGCTCTTATATTATGGGA 59.573 38.462 12.06 0.00 31.02 4.37
2283 3684 6.426937 TCAAAAGCGCTCTTATATTATGGGAC 59.573 38.462 12.06 0.00 31.02 4.46
2284 3685 4.111375 AGCGCTCTTATATTATGGGACG 57.889 45.455 2.64 0.00 0.00 4.79
2285 3686 3.119101 AGCGCTCTTATATTATGGGACGG 60.119 47.826 2.64 0.00 0.00 4.79
2286 3687 3.119245 GCGCTCTTATATTATGGGACGGA 60.119 47.826 0.00 0.00 0.00 4.69
2287 3688 4.673441 CGCTCTTATATTATGGGACGGAG 58.327 47.826 0.00 0.00 0.00 4.63
2288 3689 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
2289 3690 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
2290 3691 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
2291 3692 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2292 3693 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
2293 3694 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
2308 3709 9.377238 ACGGAGGGAGTAATATCTAAGTATTTT 57.623 33.333 0.00 0.00 0.00 1.82
2391 3792 1.202915 TCACAGGAGCATTTCAGCCAA 60.203 47.619 0.00 0.00 34.23 4.52
2495 3896 6.715264 GTGGTGTTATTGAAGGGGATATAAGG 59.285 42.308 0.00 0.00 0.00 2.69
2657 4058 7.041635 TGATTCAAAAGCAAGAAATGTGAGA 57.958 32.000 0.00 0.00 0.00 3.27
2666 4067 7.670009 AGCAAGAAATGTGAGATATATCTGC 57.330 36.000 20.05 12.88 37.25 4.26
2679 4080 7.454066 TGAGATATATCTGCCTCTCTTGTTGAT 59.546 37.037 20.05 0.00 37.25 2.57
2728 4311 6.655062 TGTAACGAAACAAGAGCTACAAATG 58.345 36.000 0.00 0.00 0.00 2.32
2730 4313 3.563808 ACGAAACAAGAGCTACAAATGCA 59.436 39.130 0.00 0.00 0.00 3.96
2744 4438 8.853126 AGCTACAAATGCACAAACATATATGAT 58.147 29.630 19.63 4.54 0.00 2.45
2745 4439 9.467258 GCTACAAATGCACAAACATATATGATT 57.533 29.630 19.63 10.96 0.00 2.57
2806 5153 2.247699 TCAAGCCTCCTAGGTGCTAA 57.752 50.000 22.97 14.46 37.80 3.09
2810 5157 3.053359 AGCCTCCTAGGTGCTAAGAAT 57.947 47.619 21.87 2.99 37.80 2.40
2820 5167 8.548877 TCCTAGGTGCTAAGAATAGTTGAAATT 58.451 33.333 9.08 0.00 0.00 1.82
2859 5210 1.202927 TGTTCCTTTCCCTTGCAGGAG 60.203 52.381 0.00 0.00 37.67 3.69
3078 5429 1.664016 CGTGCAGTCAAGAATGTTGCC 60.664 52.381 0.00 0.00 37.40 4.52
3159 5510 8.366359 AGGCATTTGATGAGGTAATTACTTTT 57.634 30.769 15.05 2.03 0.00 2.27
3319 5829 8.731275 TTGAAGAAGTATGTCAGAAGTTTTCA 57.269 30.769 0.00 0.00 0.00 2.69
3322 5832 9.818796 GAAGAAGTATGTCAGAAGTTTTCATTC 57.181 33.333 0.00 0.00 0.00 2.67
3324 5834 9.342308 AGAAGTATGTCAGAAGTTTTCATTCAA 57.658 29.630 0.00 0.00 0.00 2.69
3341 5856 9.558648 TTTCATTCAATCGAACATGAATTACTG 57.441 29.630 16.98 10.69 42.12 2.74
3377 5897 7.124750 ACCTCAGCTTGAAATTATAAAGCCAAT 59.875 33.333 13.25 0.00 45.94 3.16
3423 5964 1.668419 ACGAATTGCATGCTACTCCC 58.332 50.000 20.33 2.51 0.00 4.30
3424 5965 1.210478 ACGAATTGCATGCTACTCCCT 59.790 47.619 20.33 0.00 0.00 4.20
3425 5966 1.869767 CGAATTGCATGCTACTCCCTC 59.130 52.381 20.33 5.03 0.00 4.30
3426 5967 2.225467 GAATTGCATGCTACTCCCTCC 58.775 52.381 20.33 0.00 0.00 4.30
3427 5968 0.107456 ATTGCATGCTACTCCCTCCG 59.893 55.000 20.33 0.00 0.00 4.63
3428 5969 1.264749 TTGCATGCTACTCCCTCCGT 61.265 55.000 20.33 0.00 0.00 4.69
3429 5970 1.068250 GCATGCTACTCCCTCCGTC 59.932 63.158 11.37 0.00 0.00 4.79
3430 5971 1.742768 CATGCTACTCCCTCCGTCC 59.257 63.158 0.00 0.00 0.00 4.79
3431 5972 1.457831 ATGCTACTCCCTCCGTCCC 60.458 63.158 0.00 0.00 0.00 4.46
3432 5973 2.043248 GCTACTCCCTCCGTCCCA 60.043 66.667 0.00 0.00 0.00 4.37
3433 5974 2.424733 GCTACTCCCTCCGTCCCAC 61.425 68.421 0.00 0.00 0.00 4.61
3434 5975 2.044650 TACTCCCTCCGTCCCACG 60.045 66.667 0.00 0.00 42.11 4.94
3435 5976 2.547640 CTACTCCCTCCGTCCCACGA 62.548 65.000 0.00 0.00 46.05 4.35
3436 5977 1.929860 TACTCCCTCCGTCCCACGAT 61.930 60.000 0.00 0.00 46.05 3.73
3437 5978 1.152819 CTCCCTCCGTCCCACGATA 60.153 63.158 0.00 0.00 46.05 2.92
3438 5979 0.539901 CTCCCTCCGTCCCACGATAT 60.540 60.000 0.00 0.00 46.05 1.63
3439 5980 0.773014 TCCCTCCGTCCCACGATATA 59.227 55.000 0.00 0.00 46.05 0.86
3440 5981 1.145531 TCCCTCCGTCCCACGATATAA 59.854 52.381 0.00 0.00 46.05 0.98
3441 5982 1.544691 CCCTCCGTCCCACGATATAAG 59.455 57.143 0.00 0.00 46.05 1.73
3442 5983 2.511659 CCTCCGTCCCACGATATAAGA 58.488 52.381 0.00 0.00 46.05 2.10
3443 5984 2.228343 CCTCCGTCCCACGATATAAGAC 59.772 54.545 0.00 0.00 46.05 3.01
3444 5985 1.875514 TCCGTCCCACGATATAAGACG 59.124 52.381 4.00 4.00 46.05 4.18
3445 5986 1.605710 CCGTCCCACGATATAAGACGT 59.394 52.381 9.63 0.00 46.05 4.34
3446 5987 2.033801 CCGTCCCACGATATAAGACGTT 59.966 50.000 9.63 0.00 46.05 3.99
3447 5988 3.489738 CCGTCCCACGATATAAGACGTTT 60.490 47.826 9.63 0.00 46.05 3.60
3448 5989 4.107622 CGTCCCACGATATAAGACGTTTT 58.892 43.478 0.00 0.00 46.05 2.43
3449 5990 4.563976 CGTCCCACGATATAAGACGTTTTT 59.436 41.667 0.00 0.00 46.05 1.94
3450 5991 5.499652 CGTCCCACGATATAAGACGTTTTTG 60.500 44.000 0.00 0.00 46.05 2.44
3451 5992 4.330620 TCCCACGATATAAGACGTTTTTGC 59.669 41.667 0.00 0.00 40.76 3.68
3452 5993 4.093703 CCCACGATATAAGACGTTTTTGCA 59.906 41.667 0.00 0.00 40.76 4.08
3453 5994 5.255596 CCACGATATAAGACGTTTTTGCAG 58.744 41.667 0.00 0.00 40.76 4.41
3454 5995 5.163893 CCACGATATAAGACGTTTTTGCAGT 60.164 40.000 0.00 0.00 40.76 4.40
3455 5996 6.304126 CACGATATAAGACGTTTTTGCAGTT 58.696 36.000 0.00 0.00 40.76 3.16
3456 5997 6.795114 CACGATATAAGACGTTTTTGCAGTTT 59.205 34.615 0.00 0.00 40.76 2.66
3457 5998 7.953173 CACGATATAAGACGTTTTTGCAGTTTA 59.047 33.333 0.00 0.00 40.76 2.01
3458 5999 8.497554 ACGATATAAGACGTTTTTGCAGTTTAA 58.502 29.630 0.00 0.00 39.75 1.52
3459 6000 9.485591 CGATATAAGACGTTTTTGCAGTTTAAT 57.514 29.630 0.00 0.00 0.00 1.40
3465 6006 8.502161 AGACGTTTTTGCAGTTTAATATGAAC 57.498 30.769 0.00 0.00 0.00 3.18
3466 6007 8.349983 AGACGTTTTTGCAGTTTAATATGAACT 58.650 29.630 0.00 0.18 37.82 3.01
3476 6017 8.280909 CAGTTTAATATGAACTGCAAAAACGT 57.719 30.769 15.34 0.00 45.02 3.99
3477 6018 8.417176 CAGTTTAATATGAACTGCAAAAACGTC 58.583 33.333 15.34 0.00 45.02 4.34
3478 6019 8.349983 AGTTTAATATGAACTGCAAAAACGTCT 58.650 29.630 4.44 0.00 36.08 4.18
3479 6020 8.964150 GTTTAATATGAACTGCAAAAACGTCTT 58.036 29.630 0.00 0.00 0.00 3.01
3487 6028 9.767684 TGAACTGCAAAAACGTCTTATATTATG 57.232 29.630 0.00 0.00 0.00 1.90
3488 6029 9.221775 GAACTGCAAAAACGTCTTATATTATGG 57.778 33.333 0.00 0.00 0.00 2.74
3489 6030 7.703328 ACTGCAAAAACGTCTTATATTATGGG 58.297 34.615 0.00 0.00 0.00 4.00
3490 6031 7.554835 ACTGCAAAAACGTCTTATATTATGGGA 59.445 33.333 0.00 0.00 0.00 4.37
3491 6032 7.699566 TGCAAAAACGTCTTATATTATGGGAC 58.300 34.615 0.00 0.00 0.00 4.46
3537 6078 7.750947 ACCCTTAACACTTTATCTACCAGAT 57.249 36.000 0.00 0.00 38.70 2.90
3538 6079 7.793036 ACCCTTAACACTTTATCTACCAGATC 58.207 38.462 0.00 0.00 36.20 2.75
3539 6080 7.624077 ACCCTTAACACTTTATCTACCAGATCT 59.376 37.037 0.00 0.00 36.20 2.75
3540 6081 7.928706 CCCTTAACACTTTATCTACCAGATCTG 59.071 40.741 16.24 16.24 36.20 2.90
3541 6082 8.696374 CCTTAACACTTTATCTACCAGATCTGA 58.304 37.037 24.62 4.13 36.20 3.27
3545 6086 9.606631 AACACTTTATCTACCAGATCTGAAATC 57.393 33.333 24.62 0.00 36.20 2.17
3546 6087 8.762645 ACACTTTATCTACCAGATCTGAAATCA 58.237 33.333 24.62 4.18 36.20 2.57
3547 6088 9.258826 CACTTTATCTACCAGATCTGAAATCAG 57.741 37.037 24.62 12.28 45.08 2.90
3548 6089 8.428063 ACTTTATCTACCAGATCTGAAATCAGG 58.572 37.037 24.62 7.88 43.91 3.86
3549 6090 4.679373 TCTACCAGATCTGAAATCAGGC 57.321 45.455 24.62 3.82 43.91 4.85
3550 6091 2.725221 ACCAGATCTGAAATCAGGCC 57.275 50.000 24.62 0.00 43.91 5.19
3551 6092 1.918262 ACCAGATCTGAAATCAGGCCA 59.082 47.619 24.62 0.00 43.91 5.36
3552 6093 2.295885 CCAGATCTGAAATCAGGCCAC 58.704 52.381 24.62 1.10 43.91 5.01
3553 6094 2.356432 CCAGATCTGAAATCAGGCCACA 60.356 50.000 24.62 0.00 43.91 4.17
3554 6095 2.681848 CAGATCTGAAATCAGGCCACAC 59.318 50.000 18.34 0.00 43.91 3.82
3555 6096 2.575279 AGATCTGAAATCAGGCCACACT 59.425 45.455 5.01 0.00 43.91 3.55
3574 6146 6.407202 CACACTAACAGGCTACTTAAAGGAT 58.593 40.000 0.00 0.00 0.00 3.24
3688 6341 9.787435 TGGAACTCTGTTGTATTATTAACAAGT 57.213 29.630 0.00 0.00 37.51 3.16
3728 6383 5.221048 GCTGACACATTCATTTATGGGGTAC 60.221 44.000 0.00 0.00 33.10 3.34
3760 6415 6.878923 CCAGATTAATTGGGGAAAAGGAAAAC 59.121 38.462 8.14 0.00 31.87 2.43
3770 6427 7.418378 TGGGGAAAAGGAAAACATATGTATCT 58.582 34.615 9.21 1.89 0.00 1.98
3772 6429 8.758829 GGGGAAAAGGAAAACATATGTATCTTT 58.241 33.333 9.21 10.39 0.00 2.52
3788 6445 6.068010 TGTATCTTTGTTGGGTTTCTGACAT 58.932 36.000 0.00 0.00 0.00 3.06
3982 8665 4.341487 GGGCAATTCAACTAAACCCTAGT 58.659 43.478 0.00 0.00 32.88 2.57
3983 8666 4.770531 GGGCAATTCAACTAAACCCTAGTT 59.229 41.667 0.00 0.00 38.20 2.24
4115 8831 1.454479 CTATGCTGGGCCAGTTGGG 60.454 63.158 32.80 17.65 40.85 4.12
4378 9169 5.356190 TCTTCTGAATCCTCATGATTTGCAC 59.644 40.000 0.00 0.00 43.81 4.57
4383 9174 6.598503 TGAATCCTCATGATTTGCACTCTAT 58.401 36.000 0.00 0.00 43.81 1.98
4414 9206 7.502226 CACTTGAAGGGGTGAGCAATATTAATA 59.498 37.037 0.00 0.00 35.69 0.98
4415 9207 8.227507 ACTTGAAGGGGTGAGCAATATTAATAT 58.772 33.333 1.91 1.91 0.00 1.28
4416 9208 9.739276 CTTGAAGGGGTGAGCAATATTAATATA 57.261 33.333 8.39 0.00 0.00 0.86
4417 9209 9.739276 TTGAAGGGGTGAGCAATATTAATATAG 57.261 33.333 8.39 0.00 0.00 1.31
4420 9212 9.520515 AAGGGGTGAGCAATATTAATATAGTTG 57.479 33.333 8.39 5.79 0.00 3.16
4421 9213 7.611855 AGGGGTGAGCAATATTAATATAGTTGC 59.388 37.037 18.39 18.39 43.97 4.17
4469 9287 1.806542 CTCAATTCACCACCAAGTCCG 59.193 52.381 0.00 0.00 0.00 4.79
4500 9321 2.189594 TTCTCCCAGTTGCTGTGATG 57.810 50.000 0.00 0.00 0.00 3.07
4668 9491 4.525996 TGTACAGGGAATCATCAATGTGG 58.474 43.478 0.00 0.00 30.93 4.17
4679 9506 8.306761 GGAATCATCAATGTGGAAGTAAGTTTT 58.693 33.333 0.00 0.00 0.00 2.43
4680 9507 9.346725 GAATCATCAATGTGGAAGTAAGTTTTC 57.653 33.333 0.00 0.00 0.00 2.29
4683 9510 8.690884 TCATCAATGTGGAAGTAAGTTTTCAAA 58.309 29.630 0.00 0.00 0.00 2.69
4712 9539 5.008619 CTCAGTCAGCAATAGTGTCATCT 57.991 43.478 0.00 0.00 0.00 2.90
4713 9540 5.411831 TCAGTCAGCAATAGTGTCATCTT 57.588 39.130 0.00 0.00 0.00 2.40
4714 9541 6.530019 TCAGTCAGCAATAGTGTCATCTTA 57.470 37.500 0.00 0.00 0.00 2.10
4715 9542 6.935167 TCAGTCAGCAATAGTGTCATCTTAA 58.065 36.000 0.00 0.00 0.00 1.85
4716 9543 7.559486 TCAGTCAGCAATAGTGTCATCTTAAT 58.441 34.615 0.00 0.00 0.00 1.40
4717 9544 8.043113 TCAGTCAGCAATAGTGTCATCTTAATT 58.957 33.333 0.00 0.00 0.00 1.40
4795 9804 1.946283 GCTTCCAGCCTTCCACAGTAC 60.946 57.143 0.00 0.00 34.48 2.73
4829 9842 2.332063 AAATAGGCATGTGGGTCTCG 57.668 50.000 0.00 0.00 0.00 4.04
4879 9987 3.010696 TGGGTCACCATACCATGCTTAAA 59.989 43.478 0.00 0.00 43.37 1.52
4988 10096 1.198408 GGTGGTAAAGCGGTTAAGCAC 59.802 52.381 0.00 0.00 40.15 4.40
5073 10181 2.363306 TCAAAGCTTGCCTCTGGAAA 57.637 45.000 0.00 0.00 0.00 3.13
5143 10251 4.910195 TGTGTTCATAACATTCTCCTGCT 58.090 39.130 0.00 0.00 44.35 4.24
5245 10363 3.337358 TCATGCATATATGGTGGAAGCG 58.663 45.455 14.51 0.00 36.92 4.68
5253 10505 6.094048 GCATATATGGTGGAAGCGTATGATTT 59.906 38.462 14.51 0.00 45.36 2.17
5329 10587 1.238439 GGGGTGCATGTATGGAATCG 58.762 55.000 0.00 0.00 0.00 3.34
5351 10609 2.483106 CTCTGTTCACTGGCATCAACAG 59.517 50.000 19.67 19.67 44.76 3.16
5450 10708 2.750888 GGGCCTACTCTTTTGCGCG 61.751 63.158 0.00 0.00 0.00 6.86
5528 10809 7.994425 TGCAGACATTGACTTATCCTTTTTA 57.006 32.000 0.00 0.00 0.00 1.52
5627 10908 3.680786 TACGCGTGGACAGCAGCT 61.681 61.111 24.59 0.00 34.19 4.24
5675 10956 0.749091 TGTGCACACTGCTCTGCTTT 60.749 50.000 17.42 0.00 45.31 3.51
5699 10980 1.377690 ACATGGGAATGGTGGTGGTA 58.622 50.000 0.00 0.00 0.00 3.25
5806 11087 1.574702 GCGCCTGTAAGTGAACCCAC 61.575 60.000 0.00 0.00 43.50 4.61
5931 11313 3.705051 TCTACTACGTCTCCCCAATGTT 58.295 45.455 0.00 0.00 0.00 2.71
6149 11531 4.895297 TCTCAAAGCTCAATTTCCAAAGGT 59.105 37.500 0.00 0.00 0.00 3.50
6214 11601 8.148351 AGCACGGTATAGAAAAGATATTGCTTA 58.852 33.333 0.00 0.00 31.54 3.09
6278 11668 1.911057 AAGCCTGAGTTTGCTTACCC 58.089 50.000 0.00 0.00 45.51 3.69
6310 11700 4.082245 AGGCCAGTGTATGTATTTTTGTGC 60.082 41.667 5.01 0.00 0.00 4.57
6455 11857 3.460857 AATTACAGAGGCTCTTAGGCG 57.539 47.619 15.90 5.72 46.58 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 3.505680 CCAAAAATACTGTAGCTGTGGCA 59.494 43.478 0.00 0.00 41.70 4.92
16 17 3.506067 ACCAAAAATACTGTAGCTGTGGC 59.494 43.478 0.00 0.00 39.06 5.01
69 72 2.258748 GAGCTCCTGCCAGTTACCCC 62.259 65.000 0.87 0.00 40.80 4.95
70 73 1.222113 GAGCTCCTGCCAGTTACCC 59.778 63.158 0.87 0.00 40.80 3.69
134 137 3.449322 TTTTATTTGCTCTCGTGCGAC 57.551 42.857 0.00 0.00 35.36 5.19
141 144 5.473504 TGACTGGTCCTTTTTATTTGCTCTC 59.526 40.000 0.00 0.00 0.00 3.20
146 149 8.410141 TGTTTAGTGACTGGTCCTTTTTATTTG 58.590 33.333 0.00 0.00 0.00 2.32
148 151 8.528044 TTGTTTAGTGACTGGTCCTTTTTATT 57.472 30.769 0.00 0.00 0.00 1.40
149 152 7.230712 CCTTGTTTAGTGACTGGTCCTTTTTAT 59.769 37.037 0.00 0.00 0.00 1.40
150 153 6.544564 CCTTGTTTAGTGACTGGTCCTTTTTA 59.455 38.462 0.00 0.00 0.00 1.52
159 162 3.403038 CTGGTCCTTGTTTAGTGACTGG 58.597 50.000 0.00 0.00 0.00 4.00
165 168 3.857157 TCAAGCTGGTCCTTGTTTAGT 57.143 42.857 0.00 0.00 42.16 2.24
284 299 1.814394 CAATTAGTCCAAGCTGCAGCA 59.186 47.619 38.24 17.15 45.16 4.41
449 464 2.989840 CTCTGTTTGTAGAAGACTGGCG 59.010 50.000 0.00 0.00 0.00 5.69
532 547 4.034742 GGCTACTGACTCGACTAAAGAGAG 59.965 50.000 0.00 5.96 38.97 3.20
555 570 6.721668 TCAGGTAGTAGGATATTGATGTCCAG 59.278 42.308 9.11 0.00 40.20 3.86
601 616 3.262420 CAACAGCATCGCTTTACCTAGT 58.738 45.455 0.00 0.00 36.40 2.57
612 627 8.656849 AGTTAATTAGTTTCTACAACAGCATCG 58.343 33.333 0.00 0.00 0.00 3.84
615 630 9.991906 ACTAGTTAATTAGTTTCTACAACAGCA 57.008 29.630 4.89 0.00 29.72 4.41
636 655 2.031495 AGTGCTTCCTTCCCACTAGT 57.969 50.000 0.00 0.00 38.00 2.57
680 699 8.859236 ATGGATGAATGGTGATACTGAATTAG 57.141 34.615 0.00 0.00 0.00 1.73
733 767 7.562454 TTTACTTGTACTCTTTTCACTTGGG 57.438 36.000 0.00 0.00 0.00 4.12
760 845 6.734137 TCAGTGCAAAACCAGTATAAACAAG 58.266 36.000 0.00 0.00 0.00 3.16
905 1009 5.297029 AGCTGAGAGAAAAACCTAAACACAC 59.703 40.000 0.00 0.00 0.00 3.82
967 1071 3.041940 GGCGACACACCGGAACTG 61.042 66.667 9.46 0.00 0.00 3.16
1009 1113 1.541147 CATTGTGCCACCGATTGAAGT 59.459 47.619 0.00 0.00 0.00 3.01
1031 1135 7.394016 TCCAAACAGAAGCATGACTAGAAATA 58.606 34.615 0.00 0.00 0.00 1.40
1075 1179 8.712285 TTATGAAAATAAGGGAGTGTCTTACG 57.288 34.615 0.00 0.00 30.61 3.18
1152 1278 5.088739 CGGTGCTTTTTAATAGTTGAGCAG 58.911 41.667 0.00 0.00 40.39 4.24
1306 1433 3.799432 TGGTATGCCAAAGTGTACCTT 57.201 42.857 0.00 0.00 42.83 3.50
1339 1466 3.016736 ACCATGCCACTTATTTCCGAAG 58.983 45.455 0.00 0.00 0.00 3.79
1340 1467 3.080300 ACCATGCCACTTATTTCCGAA 57.920 42.857 0.00 0.00 0.00 4.30
1341 1468 2.799126 ACCATGCCACTTATTTCCGA 57.201 45.000 0.00 0.00 0.00 4.55
1342 1469 3.866883 AAACCATGCCACTTATTTCCG 57.133 42.857 0.00 0.00 0.00 4.30
1343 1470 6.524101 TCTAAAACCATGCCACTTATTTCC 57.476 37.500 0.00 0.00 0.00 3.13
1344 1471 7.771183 TGATCTAAAACCATGCCACTTATTTC 58.229 34.615 0.00 0.00 0.00 2.17
1345 1472 7.716799 TGATCTAAAACCATGCCACTTATTT 57.283 32.000 0.00 0.00 0.00 1.40
1346 1473 7.716799 TTGATCTAAAACCATGCCACTTATT 57.283 32.000 0.00 0.00 0.00 1.40
1347 1474 7.716799 TTTGATCTAAAACCATGCCACTTAT 57.283 32.000 0.00 0.00 0.00 1.73
1348 1475 7.716799 ATTTGATCTAAAACCATGCCACTTA 57.283 32.000 0.00 0.00 0.00 2.24
1349 1476 6.610075 ATTTGATCTAAAACCATGCCACTT 57.390 33.333 0.00 0.00 0.00 3.16
1350 1477 6.610075 AATTTGATCTAAAACCATGCCACT 57.390 33.333 0.00 0.00 0.00 4.00
1351 1478 6.873076 TCAAATTTGATCTAAAACCATGCCAC 59.127 34.615 16.91 0.00 31.01 5.01
1352 1479 7.002250 TCAAATTTGATCTAAAACCATGCCA 57.998 32.000 16.91 0.00 31.01 4.92
1353 1480 7.603784 AGTTCAAATTTGATCTAAAACCATGCC 59.396 33.333 23.97 0.00 35.94 4.40
1354 1481 8.538409 AGTTCAAATTTGATCTAAAACCATGC 57.462 30.769 23.97 0.00 35.94 4.06
1362 1489 9.672086 CGTGGTTTTAGTTCAAATTTGATCTAA 57.328 29.630 30.46 30.46 42.87 2.10
1363 1490 7.806014 GCGTGGTTTTAGTTCAAATTTGATCTA 59.194 33.333 25.14 25.14 38.05 1.98
1364 1491 6.640907 GCGTGGTTTTAGTTCAAATTTGATCT 59.359 34.615 26.75 26.75 39.71 2.75
1365 1492 6.128929 GGCGTGGTTTTAGTTCAAATTTGATC 60.129 38.462 21.10 19.27 37.00 2.92
1366 1493 5.694458 GGCGTGGTTTTAGTTCAAATTTGAT 59.306 36.000 21.10 10.31 37.00 2.57
1367 1494 5.044558 GGCGTGGTTTTAGTTCAAATTTGA 58.955 37.500 16.91 16.91 34.92 2.69
1368 1495 4.806247 TGGCGTGGTTTTAGTTCAAATTTG 59.194 37.500 12.15 12.15 0.00 2.32
1369 1496 4.806775 GTGGCGTGGTTTTAGTTCAAATTT 59.193 37.500 0.00 0.00 0.00 1.82
1370 1497 4.098807 AGTGGCGTGGTTTTAGTTCAAATT 59.901 37.500 0.00 0.00 0.00 1.82
1371 1498 3.634910 AGTGGCGTGGTTTTAGTTCAAAT 59.365 39.130 0.00 0.00 0.00 2.32
1372 1499 3.018149 AGTGGCGTGGTTTTAGTTCAAA 58.982 40.909 0.00 0.00 0.00 2.69
1373 1500 2.645802 AGTGGCGTGGTTTTAGTTCAA 58.354 42.857 0.00 0.00 0.00 2.69
1374 1501 2.335316 AGTGGCGTGGTTTTAGTTCA 57.665 45.000 0.00 0.00 0.00 3.18
1375 1502 5.366829 AATAAGTGGCGTGGTTTTAGTTC 57.633 39.130 0.00 0.00 0.00 3.01
1376 1503 5.533528 AGAAATAAGTGGCGTGGTTTTAGTT 59.466 36.000 0.00 0.00 0.00 2.24
1377 1504 5.048991 CAGAAATAAGTGGCGTGGTTTTAGT 60.049 40.000 0.00 0.00 0.00 2.24
1378 1505 5.180492 TCAGAAATAAGTGGCGTGGTTTTAG 59.820 40.000 0.00 0.00 0.00 1.85
1379 1506 5.064558 TCAGAAATAAGTGGCGTGGTTTTA 58.935 37.500 0.00 0.00 0.00 1.52
1380 1507 3.886505 TCAGAAATAAGTGGCGTGGTTTT 59.113 39.130 0.00 0.00 0.00 2.43
1381 1508 3.482436 TCAGAAATAAGTGGCGTGGTTT 58.518 40.909 0.00 0.00 0.00 3.27
1382 1509 3.134574 TCAGAAATAAGTGGCGTGGTT 57.865 42.857 0.00 0.00 0.00 3.67
1383 1510 2.812011 GTTCAGAAATAAGTGGCGTGGT 59.188 45.455 0.00 0.00 0.00 4.16
1384 1511 2.159707 CGTTCAGAAATAAGTGGCGTGG 60.160 50.000 0.00 0.00 0.00 4.94
1385 1512 2.159707 CCGTTCAGAAATAAGTGGCGTG 60.160 50.000 0.00 0.00 0.00 5.34
1386 1513 2.073816 CCGTTCAGAAATAAGTGGCGT 58.926 47.619 0.00 0.00 0.00 5.68
1387 1514 2.343101 TCCGTTCAGAAATAAGTGGCG 58.657 47.619 0.00 0.00 0.00 5.69
1388 1515 2.678336 CCTCCGTTCAGAAATAAGTGGC 59.322 50.000 0.00 0.00 0.00 5.01
1389 1516 3.055385 TCCCTCCGTTCAGAAATAAGTGG 60.055 47.826 0.00 0.00 0.00 4.00
1390 1517 4.184629 CTCCCTCCGTTCAGAAATAAGTG 58.815 47.826 0.00 0.00 0.00 3.16
1391 1518 3.838903 ACTCCCTCCGTTCAGAAATAAGT 59.161 43.478 0.00 0.00 0.00 2.24
1392 1519 4.473477 ACTCCCTCCGTTCAGAAATAAG 57.527 45.455 0.00 0.00 0.00 1.73
1393 1520 6.555463 AATACTCCCTCCGTTCAGAAATAA 57.445 37.500 0.00 0.00 0.00 1.40
1394 1521 7.664552 TTAATACTCCCTCCGTTCAGAAATA 57.335 36.000 0.00 0.00 0.00 1.40
1395 1522 6.555463 TTAATACTCCCTCCGTTCAGAAAT 57.445 37.500 0.00 0.00 0.00 2.17
1396 1523 6.555463 ATTAATACTCCCTCCGTTCAGAAA 57.445 37.500 0.00 0.00 0.00 2.52
1397 1524 6.555463 AATTAATACTCCCTCCGTTCAGAA 57.445 37.500 0.00 0.00 0.00 3.02
1398 1525 7.664552 TTAATTAATACTCCCTCCGTTCAGA 57.335 36.000 0.00 0.00 0.00 3.27
1399 1526 8.774586 CAATTAATTAATACTCCCTCCGTTCAG 58.225 37.037 11.07 0.00 0.00 3.02
1400 1527 8.269317 ACAATTAATTAATACTCCCTCCGTTCA 58.731 33.333 11.07 0.00 0.00 3.18
1401 1528 8.672823 ACAATTAATTAATACTCCCTCCGTTC 57.327 34.615 11.07 0.00 0.00 3.95
1453 2714 8.567948 ACGTGATCTATCAACACAGAAATTTTT 58.432 29.630 0.00 0.00 38.75 1.94
1652 2915 7.810282 CCGGATGAGATACTACATTTTAGACTG 59.190 40.741 0.00 0.00 0.00 3.51
1653 2916 7.724506 TCCGGATGAGATACTACATTTTAGACT 59.275 37.037 0.00 0.00 0.00 3.24
1654 2917 7.883217 TCCGGATGAGATACTACATTTTAGAC 58.117 38.462 0.00 0.00 0.00 2.59
1655 2918 7.942894 TCTCCGGATGAGATACTACATTTTAGA 59.057 37.037 3.57 0.00 45.29 2.10
1656 2919 8.112016 TCTCCGGATGAGATACTACATTTTAG 57.888 38.462 3.57 0.00 45.29 1.85
1658 2921 6.978674 TCTCCGGATGAGATACTACATTTT 57.021 37.500 3.57 0.00 45.29 1.82
1670 2933 2.423892 TCTCGTTTCTTCTCCGGATGAG 59.576 50.000 3.57 6.21 42.90 2.90
1672 2935 2.941453 TCTCGTTTCTTCTCCGGATG 57.059 50.000 3.57 0.00 0.00 3.51
1674 2937 2.163815 GTGATCTCGTTTCTTCTCCGGA 59.836 50.000 2.93 2.93 0.00 5.14
1675 2938 2.094700 TGTGATCTCGTTTCTTCTCCGG 60.095 50.000 0.00 0.00 0.00 5.14
1677 2940 4.748892 TCATGTGATCTCGTTTCTTCTCC 58.251 43.478 0.00 0.00 0.00 3.71
1678 2941 6.900568 ATTCATGTGATCTCGTTTCTTCTC 57.099 37.500 0.00 0.00 0.00 2.87
1679 2942 6.652481 ACAATTCATGTGATCTCGTTTCTTCT 59.348 34.615 0.00 0.00 41.93 2.85
1680 2943 6.835914 ACAATTCATGTGATCTCGTTTCTTC 58.164 36.000 0.00 0.00 41.93 2.87
1681 2944 6.808008 ACAATTCATGTGATCTCGTTTCTT 57.192 33.333 0.00 0.00 41.93 2.52
1736 3109 4.511617 TTTTGCTCCATTGCGATGTTAA 57.488 36.364 13.01 0.12 35.36 2.01
1803 3184 6.344500 GTTCAAAGGAGATTAGAGCAGATGA 58.656 40.000 0.00 0.00 0.00 2.92
1857 3238 3.811497 TGGCAAGATTATTGCGAGAGATG 59.189 43.478 9.69 0.00 45.78 2.90
1885 3266 5.843019 TCCTTATCTTGGTTTCTTCCACT 57.157 39.130 0.00 0.00 37.20 4.00
1909 3290 3.635591 AGTTAGGCATCCCATTTTCTGG 58.364 45.455 0.00 0.00 45.51 3.86
1999 3380 8.800370 TTGTATTCCATCAACAGCATAAGTTA 57.200 30.769 0.00 0.00 0.00 2.24
2004 3385 7.774625 TCTTGATTGTATTCCATCAACAGCATA 59.225 33.333 0.00 0.00 0.00 3.14
2007 3389 6.441093 TCTTGATTGTATTCCATCAACAGC 57.559 37.500 0.00 0.00 0.00 4.40
2041 3423 3.991773 CCCTGCACATGATTCAGTTTTTG 59.008 43.478 0.00 0.00 0.00 2.44
2042 3424 3.896888 TCCCTGCACATGATTCAGTTTTT 59.103 39.130 0.00 0.00 0.00 1.94
2047 3429 1.211212 TCCTCCCTGCACATGATTCAG 59.789 52.381 0.00 3.22 0.00 3.02
2048 3430 1.288188 TCCTCCCTGCACATGATTCA 58.712 50.000 0.00 0.00 0.00 2.57
2049 3431 2.228059 CATCCTCCCTGCACATGATTC 58.772 52.381 0.00 0.00 0.00 2.52
2211 3612 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2212 3613 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
2213 3614 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
2214 3615 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
2215 3616 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
2216 3617 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
2217 3618 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
2218 3619 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
2240 3641 8.918658 CGCTTTTGACACTACACTAGTATAAAA 58.081 33.333 0.00 0.00 37.23 1.52
2241 3642 7.062605 GCGCTTTTGACACTACACTAGTATAAA 59.937 37.037 0.00 0.00 37.23 1.40
2242 3643 6.529125 GCGCTTTTGACACTACACTAGTATAA 59.471 38.462 0.00 0.00 37.23 0.98
2243 3644 6.032094 GCGCTTTTGACACTACACTAGTATA 58.968 40.000 0.00 0.00 37.23 1.47
2244 3645 4.863131 GCGCTTTTGACACTACACTAGTAT 59.137 41.667 0.00 0.00 37.23 2.12
2245 3646 4.022589 AGCGCTTTTGACACTACACTAGTA 60.023 41.667 2.64 0.00 37.23 1.82
2246 3647 3.057734 GCGCTTTTGACACTACACTAGT 58.942 45.455 0.00 0.00 40.28 2.57
2247 3648 3.318017 AGCGCTTTTGACACTACACTAG 58.682 45.455 2.64 0.00 0.00 2.57
2248 3649 3.005472 AGAGCGCTTTTGACACTACACTA 59.995 43.478 13.26 0.00 0.00 2.74
2249 3650 2.135933 GAGCGCTTTTGACACTACACT 58.864 47.619 13.26 0.00 0.00 3.55
2250 3651 2.135933 AGAGCGCTTTTGACACTACAC 58.864 47.619 13.26 0.00 0.00 2.90
2251 3652 2.526304 AGAGCGCTTTTGACACTACA 57.474 45.000 13.26 0.00 0.00 2.74
2252 3653 6.830114 ATATAAGAGCGCTTTTGACACTAC 57.170 37.500 22.35 0.08 35.56 2.73
2253 3654 8.978539 CATAATATAAGAGCGCTTTTGACACTA 58.021 33.333 22.35 8.24 35.56 2.74
2254 3655 7.041780 CCATAATATAAGAGCGCTTTTGACACT 60.042 37.037 22.35 5.03 35.56 3.55
2255 3656 7.072030 CCATAATATAAGAGCGCTTTTGACAC 58.928 38.462 22.35 2.46 35.56 3.67
2256 3657 6.204688 CCCATAATATAAGAGCGCTTTTGACA 59.795 38.462 22.35 8.10 35.56 3.58
2257 3658 6.426937 TCCCATAATATAAGAGCGCTTTTGAC 59.573 38.462 22.35 4.04 35.56 3.18
2258 3659 6.426937 GTCCCATAATATAAGAGCGCTTTTGA 59.573 38.462 22.35 11.00 35.56 2.69
2259 3660 6.603095 GTCCCATAATATAAGAGCGCTTTTG 58.397 40.000 22.35 5.08 35.56 2.44
2260 3661 5.408604 CGTCCCATAATATAAGAGCGCTTTT 59.591 40.000 17.98 17.98 35.56 2.27
2261 3662 4.929808 CGTCCCATAATATAAGAGCGCTTT 59.070 41.667 13.26 1.42 35.56 3.51
2262 3663 4.495422 CGTCCCATAATATAAGAGCGCTT 58.505 43.478 13.26 8.09 38.15 4.68
2263 3664 3.119101 CCGTCCCATAATATAAGAGCGCT 60.119 47.826 11.27 11.27 0.00 5.92
2264 3665 3.119245 TCCGTCCCATAATATAAGAGCGC 60.119 47.826 0.00 0.00 0.00 5.92
2265 3666 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
2266 3667 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
2267 3668 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
2268 3669 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2269 3670 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2270 3671 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2271 3672 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2272 3673 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2273 3674 4.474303 TTACTCCCTCCGTCCCATAATA 57.526 45.455 0.00 0.00 0.00 0.98
2274 3675 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
2275 3676 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
2276 3677 4.294168 AGATATTACTCCCTCCGTCCCATA 59.706 45.833 0.00 0.00 0.00 2.74
2277 3678 3.077695 AGATATTACTCCCTCCGTCCCAT 59.922 47.826 0.00 0.00 0.00 4.00
2278 3679 2.449730 AGATATTACTCCCTCCGTCCCA 59.550 50.000 0.00 0.00 0.00 4.37
2279 3680 3.172471 AGATATTACTCCCTCCGTCCC 57.828 52.381 0.00 0.00 0.00 4.46
2280 3681 5.323581 ACTTAGATATTACTCCCTCCGTCC 58.676 45.833 0.00 0.00 0.00 4.79
2281 3682 8.578448 AATACTTAGATATTACTCCCTCCGTC 57.422 38.462 0.00 0.00 0.00 4.79
2282 3683 8.953223 AAATACTTAGATATTACTCCCTCCGT 57.047 34.615 0.00 0.00 0.00 4.69
2283 3684 9.857957 GAAAATACTTAGATATTACTCCCTCCG 57.142 37.037 0.00 0.00 0.00 4.63
2308 3709 2.108075 TCCCTCATTTCCTGCAACAAGA 59.892 45.455 0.00 0.00 0.00 3.02
2311 3712 1.887956 GCTCCCTCATTTCCTGCAACA 60.888 52.381 0.00 0.00 0.00 3.33
2391 3792 1.000283 CATAAGCGCCGAGAGAATCCT 60.000 52.381 2.29 0.00 33.66 3.24
2663 4064 7.798596 ATTGTATTATCAACAAGAGAGGCAG 57.201 36.000 0.00 0.00 40.00 4.85
2666 4067 9.784531 ACCATATTGTATTATCAACAAGAGAGG 57.215 33.333 0.00 0.00 40.00 3.69
2695 4096 5.885881 TCTTGTTTCGTTACAGCAACAAAT 58.114 33.333 5.60 0.00 36.96 2.32
2696 4097 5.298197 TCTTGTTTCGTTACAGCAACAAA 57.702 34.783 5.60 0.00 36.96 2.83
2697 4098 4.729458 GCTCTTGTTTCGTTACAGCAACAA 60.729 41.667 0.00 0.00 35.54 2.83
2698 4099 3.242608 GCTCTTGTTTCGTTACAGCAACA 60.243 43.478 0.00 0.00 36.92 3.33
2700 4101 3.202906 AGCTCTTGTTTCGTTACAGCAA 58.797 40.909 0.00 0.00 0.00 3.91
2701 4102 2.833794 AGCTCTTGTTTCGTTACAGCA 58.166 42.857 0.00 0.00 0.00 4.41
2702 4103 3.739300 TGTAGCTCTTGTTTCGTTACAGC 59.261 43.478 0.00 0.00 0.00 4.40
2748 4442 7.215743 ACCCTGTACCCTATGCTTATAAAAA 57.784 36.000 0.00 0.00 0.00 1.94
2758 4533 4.654262 AGTATGTCAACCCTGTACCCTATG 59.346 45.833 0.00 0.00 0.00 2.23
2806 5153 9.289782 AGCTCACAGTTTAATTTCAACTATTCT 57.710 29.630 3.13 0.00 32.48 2.40
2810 5157 7.861630 GTGAGCTCACAGTTTAATTTCAACTA 58.138 34.615 36.23 0.00 45.75 2.24
2859 5210 7.810766 TGTTTCAAGAACTTCATTGACAAAC 57.189 32.000 0.00 7.06 35.25 2.93
2923 5274 3.640029 GTCGATAGTCCATTTACCCCTGA 59.360 47.826 0.00 0.00 37.40 3.86
3043 5394 0.729116 GCACGCATGACAATAGCAGT 59.271 50.000 0.00 0.00 0.00 4.40
3078 5429 2.661675 CACAACTGTTCGACCTGTATCG 59.338 50.000 0.00 0.00 43.63 2.92
3230 5706 4.932268 TTACGCCTTGAAAATTACGGAG 57.068 40.909 0.00 0.00 0.00 4.63
3231 5707 5.686159 TTTTACGCCTTGAAAATTACGGA 57.314 34.783 0.00 0.00 0.00 4.69
3280 5781 6.808008 ACTTCTTCAATATAATCATGCCCG 57.192 37.500 0.00 0.00 0.00 6.13
3281 5782 9.236006 ACATACTTCTTCAATATAATCATGCCC 57.764 33.333 0.00 0.00 0.00 5.36
3316 5826 8.945057 TCAGTAATTCATGTTCGATTGAATGAA 58.055 29.630 15.37 12.17 40.70 2.57
3317 5827 8.491331 TCAGTAATTCATGTTCGATTGAATGA 57.509 30.769 15.37 8.55 40.70 2.57
3318 5828 8.393366 ACTCAGTAATTCATGTTCGATTGAATG 58.607 33.333 15.37 8.10 40.70 2.67
3319 5829 8.393366 CACTCAGTAATTCATGTTCGATTGAAT 58.607 33.333 11.05 11.05 42.77 2.57
3322 5832 7.065216 ACACTCAGTAATTCATGTTCGATTG 57.935 36.000 0.00 0.00 0.00 2.67
3324 5834 6.402550 GCAACACTCAGTAATTCATGTTCGAT 60.403 38.462 0.00 0.00 0.00 3.59
3377 5897 5.497464 TGTCTGATGGTTAATGTCAGGAA 57.503 39.130 12.08 2.62 39.77 3.36
3423 5964 2.095869 CGTCTTATATCGTGGGACGGAG 60.096 54.545 0.00 0.00 43.69 4.63
3424 5965 1.875514 CGTCTTATATCGTGGGACGGA 59.124 52.381 0.00 0.00 43.69 4.69
3425 5966 2.327081 CGTCTTATATCGTGGGACGG 57.673 55.000 0.00 0.00 43.69 4.79
3427 5968 5.725864 GCAAAAACGTCTTATATCGTGGGAC 60.726 44.000 0.00 0.00 40.19 4.46
3428 5969 4.330620 GCAAAAACGTCTTATATCGTGGGA 59.669 41.667 0.00 0.00 40.19 4.37
3429 5970 4.093703 TGCAAAAACGTCTTATATCGTGGG 59.906 41.667 0.00 0.00 40.19 4.61
3430 5971 5.163893 ACTGCAAAAACGTCTTATATCGTGG 60.164 40.000 0.00 0.00 40.19 4.94
3431 5972 5.854157 ACTGCAAAAACGTCTTATATCGTG 58.146 37.500 0.00 0.00 40.19 4.35
3432 5973 6.476243 AACTGCAAAAACGTCTTATATCGT 57.524 33.333 0.00 0.00 42.12 3.73
3433 5974 8.868744 TTAAACTGCAAAAACGTCTTATATCG 57.131 30.769 0.00 0.00 0.00 2.92
3439 5980 8.964150 GTTCATATTAAACTGCAAAAACGTCTT 58.036 29.630 0.00 0.00 0.00 3.01
3440 5981 8.349983 AGTTCATATTAAACTGCAAAAACGTCT 58.650 29.630 0.00 0.00 35.68 4.18
3441 5982 8.417176 CAGTTCATATTAAACTGCAAAAACGTC 58.583 33.333 12.50 0.00 44.94 4.34
3442 5983 8.280909 CAGTTCATATTAAACTGCAAAAACGT 57.719 30.769 12.50 0.00 44.94 3.99
3452 5993 8.349983 AGACGTTTTTGCAGTTCATATTAAACT 58.650 29.630 0.00 0.00 37.44 2.66
3453 5994 8.502161 AGACGTTTTTGCAGTTCATATTAAAC 57.498 30.769 0.00 0.00 0.00 2.01
3461 6002 9.767684 CATAATATAAGACGTTTTTGCAGTTCA 57.232 29.630 0.00 0.00 0.00 3.18
3462 6003 9.221775 CCATAATATAAGACGTTTTTGCAGTTC 57.778 33.333 0.00 0.00 0.00 3.01
3463 6004 8.188139 CCCATAATATAAGACGTTTTTGCAGTT 58.812 33.333 0.00 0.00 0.00 3.16
3464 6005 7.554835 TCCCATAATATAAGACGTTTTTGCAGT 59.445 33.333 0.00 0.00 0.00 4.40
3465 6006 7.855904 GTCCCATAATATAAGACGTTTTTGCAG 59.144 37.037 0.00 0.00 0.00 4.41
3466 6007 7.337184 TGTCCCATAATATAAGACGTTTTTGCA 59.663 33.333 0.00 0.00 0.00 4.08
3467 6008 7.699566 TGTCCCATAATATAAGACGTTTTTGC 58.300 34.615 0.00 0.00 0.00 3.68
3468 6009 9.104965 TCTGTCCCATAATATAAGACGTTTTTG 57.895 33.333 0.00 0.00 0.00 2.44
3469 6010 9.326413 CTCTGTCCCATAATATAAGACGTTTTT 57.674 33.333 0.00 0.00 0.00 1.94
3470 6011 7.931948 CCTCTGTCCCATAATATAAGACGTTTT 59.068 37.037 0.00 0.00 0.00 2.43
3471 6012 7.070821 ACCTCTGTCCCATAATATAAGACGTTT 59.929 37.037 0.00 0.00 0.00 3.60
3472 6013 6.553852 ACCTCTGTCCCATAATATAAGACGTT 59.446 38.462 0.00 0.00 0.00 3.99
3473 6014 6.075984 ACCTCTGTCCCATAATATAAGACGT 58.924 40.000 0.00 0.00 0.00 4.34
3474 6015 6.591750 ACCTCTGTCCCATAATATAAGACG 57.408 41.667 0.00 0.00 0.00 4.18
3475 6016 8.653036 ACTACCTCTGTCCCATAATATAAGAC 57.347 38.462 0.00 0.00 0.00 3.01
3476 6017 9.750783 GTACTACCTCTGTCCCATAATATAAGA 57.249 37.037 0.00 0.00 0.00 2.10
3477 6018 8.968969 GGTACTACCTCTGTCCCATAATATAAG 58.031 40.741 0.00 0.00 34.73 1.73
3478 6019 8.890410 GGTACTACCTCTGTCCCATAATATAA 57.110 38.462 0.00 0.00 34.73 0.98
3495 6036 5.064314 AGGGTTCTATCTGAGGTACTACC 57.936 47.826 0.00 0.00 41.55 3.18
3496 6037 7.559170 TGTTAAGGGTTCTATCTGAGGTACTAC 59.441 40.741 0.00 0.00 41.55 2.73
3497 6038 7.559170 GTGTTAAGGGTTCTATCTGAGGTACTA 59.441 40.741 0.00 0.00 41.55 1.82
3499 6040 6.380560 AGTGTTAAGGGTTCTATCTGAGGTAC 59.619 42.308 0.00 0.00 0.00 3.34
3500 6041 6.500336 AGTGTTAAGGGTTCTATCTGAGGTA 58.500 40.000 0.00 0.00 0.00 3.08
3501 6042 5.342866 AGTGTTAAGGGTTCTATCTGAGGT 58.657 41.667 0.00 0.00 0.00 3.85
3502 6043 5.941555 AGTGTTAAGGGTTCTATCTGAGG 57.058 43.478 0.00 0.00 0.00 3.86
3503 6044 9.535878 GATAAAGTGTTAAGGGTTCTATCTGAG 57.464 37.037 0.00 0.00 0.00 3.35
3504 6045 9.268282 AGATAAAGTGTTAAGGGTTCTATCTGA 57.732 33.333 0.00 0.00 0.00 3.27
3537 6078 3.072330 TGTTAGTGTGGCCTGATTTCAGA 59.928 43.478 3.32 0.00 46.59 3.27
3538 6079 3.411446 TGTTAGTGTGGCCTGATTTCAG 58.589 45.455 3.32 0.39 43.40 3.02
3539 6080 3.411446 CTGTTAGTGTGGCCTGATTTCA 58.589 45.455 3.32 0.00 0.00 2.69
3540 6081 2.749621 CCTGTTAGTGTGGCCTGATTTC 59.250 50.000 3.32 0.00 0.00 2.17
3541 6082 2.795329 CCTGTTAGTGTGGCCTGATTT 58.205 47.619 3.32 0.00 0.00 2.17
3542 6083 1.614317 GCCTGTTAGTGTGGCCTGATT 60.614 52.381 3.32 0.00 40.71 2.57
3543 6084 0.035056 GCCTGTTAGTGTGGCCTGAT 60.035 55.000 3.32 0.00 40.71 2.90
3544 6085 1.374947 GCCTGTTAGTGTGGCCTGA 59.625 57.895 3.32 0.00 40.71 3.86
3545 6086 3.987404 GCCTGTTAGTGTGGCCTG 58.013 61.111 3.32 0.00 40.71 4.85
3548 6089 2.474410 AAGTAGCCTGTTAGTGTGGC 57.526 50.000 0.00 0.00 46.42 5.01
3549 6090 4.935808 CCTTTAAGTAGCCTGTTAGTGTGG 59.064 45.833 0.00 0.00 0.00 4.17
3550 6091 5.790593 TCCTTTAAGTAGCCTGTTAGTGTG 58.209 41.667 0.00 0.00 0.00 3.82
3551 6092 6.351966 GGATCCTTTAAGTAGCCTGTTAGTGT 60.352 42.308 3.84 0.00 0.00 3.55
3552 6093 6.049790 GGATCCTTTAAGTAGCCTGTTAGTG 58.950 44.000 3.84 0.00 0.00 2.74
3553 6094 5.130643 GGGATCCTTTAAGTAGCCTGTTAGT 59.869 44.000 12.58 0.00 0.00 2.24
3554 6095 5.130477 TGGGATCCTTTAAGTAGCCTGTTAG 59.870 44.000 12.58 0.00 0.00 2.34
3555 6096 5.034200 TGGGATCCTTTAAGTAGCCTGTTA 58.966 41.667 12.58 0.00 0.00 2.41
3574 6146 5.073144 ACTCTGTCTTGGACTTAATTTGGGA 59.927 40.000 0.00 0.00 33.15 4.37
3688 6341 5.530543 TGTGTCAGCTCATTTGAACAACATA 59.469 36.000 0.00 0.00 0.00 2.29
3692 6345 5.067544 TGAATGTGTCAGCTCATTTGAACAA 59.932 36.000 0.42 0.00 38.47 2.83
3755 6410 9.705290 AAACCCAACAAAGATACATATGTTTTC 57.295 29.630 14.77 11.49 33.97 2.29
3760 6415 8.184192 GTCAGAAACCCAACAAAGATACATATG 58.816 37.037 0.00 0.00 0.00 1.78
3770 6427 3.636679 TCCATGTCAGAAACCCAACAAA 58.363 40.909 0.00 0.00 0.00 2.83
3772 6429 2.955660 GTTCCATGTCAGAAACCCAACA 59.044 45.455 0.00 0.00 0.00 3.33
3788 6445 7.388437 AGTGTTAATAATACAACCGAGTTCCA 58.612 34.615 2.87 0.00 0.00 3.53
3982 8665 8.303156 CAATAATGTACACAAAATCACAGGGAA 58.697 33.333 0.00 0.00 0.00 3.97
3983 8666 7.667635 TCAATAATGTACACAAAATCACAGGGA 59.332 33.333 0.00 0.00 0.00 4.20
4115 8831 1.825090 TGACCTCACATGAATGGTGC 58.175 50.000 0.00 0.14 36.22 5.01
4350 9128 8.794553 GCAAATCATGAGGATTCAGAAGAATAT 58.205 33.333 0.09 0.00 45.46 1.28
4378 9169 3.452627 ACCCCTTCAAGTGCTACATAGAG 59.547 47.826 0.00 0.00 0.00 2.43
4383 9174 1.347707 CTCACCCCTTCAAGTGCTACA 59.652 52.381 0.00 0.00 33.90 2.74
4420 9212 8.614469 AGCCTCTTCTAATCAAAATATAGTGC 57.386 34.615 0.00 0.00 0.00 4.40
4439 9257 4.101741 GGTGGTGAATTGAGTATAGCCTCT 59.898 45.833 0.00 0.00 32.50 3.69
4469 9287 0.110486 TGGGAGAAAAGTCAGGTGGC 59.890 55.000 0.00 0.00 0.00 5.01
4668 9491 7.033185 TGAGCTGGTTTTTGAAAACTTACTTC 58.967 34.615 16.31 10.02 45.70 3.01
4679 9506 1.949525 GCTGACTGAGCTGGTTTTTGA 59.050 47.619 0.00 0.00 45.21 2.69
4680 9507 2.412421 GCTGACTGAGCTGGTTTTTG 57.588 50.000 0.00 0.00 45.21 2.44
4716 9543 9.378551 GCATAATCGACAGGGTAATGATTATAA 57.621 33.333 5.69 0.00 39.15 0.98
4717 9544 8.536175 TGCATAATCGACAGGGTAATGATTATA 58.464 33.333 5.69 0.00 39.15 0.98
4723 9550 5.527214 TCTTTGCATAATCGACAGGGTAATG 59.473 40.000 0.00 0.00 0.00 1.90
4795 9804 8.829612 ACATGCCTATTTTTGTTTTTCTCAAAG 58.170 29.630 0.00 0.00 36.40 2.77
4829 9842 8.178313 GCTTATATTCTGTTCTGGTCAAACTTC 58.822 37.037 0.00 0.00 0.00 3.01
4879 9987 8.860780 AATTTGAAGACTAAATGAGAGCTCTT 57.139 30.769 19.36 4.03 0.00 2.85
4943 10051 1.548582 CCTTGTCCCTTTGAGCACCAT 60.549 52.381 0.00 0.00 0.00 3.55
5073 10181 4.330944 TCTCCAATACGACAAACACTGT 57.669 40.909 0.00 0.00 42.61 3.55
5143 10251 4.493547 CAGAACAGTGCACCAAAGAAAAA 58.506 39.130 14.63 0.00 0.00 1.94
5253 10505 5.046950 ACCCTCAAACAAAACAAGCAACTTA 60.047 36.000 0.00 0.00 0.00 2.24
5329 10587 1.198637 GTTGATGCCAGTGAACAGAGC 59.801 52.381 0.00 0.00 0.00 4.09
5351 10609 1.026182 TGGCATCACCGATTGACAGC 61.026 55.000 0.00 0.00 43.94 4.40
5450 10708 8.697507 AAATCTTCATGTGATTAATAGGACCC 57.302 34.615 13.87 0.00 34.19 4.46
5528 10809 2.374504 CTCCATGGCAACCTATCTCCAT 59.625 50.000 6.96 0.00 39.72 3.41
5577 10858 7.878547 TTGGATATGCTATCAACATGAACAA 57.121 32.000 0.00 0.00 0.00 2.83
5627 10908 6.829298 TGGTGTACATGAACCAAAAGAACTTA 59.171 34.615 14.50 0.00 43.46 2.24
5675 10956 2.026356 CACCACCATTCCCATGTAGACA 60.026 50.000 0.00 0.00 0.00 3.41
5699 10980 0.034477 GGATGTTGGGGGTGAACGAT 60.034 55.000 0.00 0.00 0.00 3.73
5837 11213 9.781834 TTTTTAAGCACCATATTTTGTATCTCG 57.218 29.630 0.00 0.00 0.00 4.04
5931 11313 2.634639 TAAGACCCTTAGAGCCCACA 57.365 50.000 0.00 0.00 0.00 4.17
5938 11320 3.118884 GCGTGGTGAATAAGACCCTTAGA 60.119 47.826 0.00 0.00 31.84 2.10
6149 11531 9.101655 CTTTGATGAATACATGTGTGTCTATCA 57.898 33.333 9.11 8.18 39.77 2.15
6278 11668 3.569701 ACATACACTGGCCTTTTCTTGTG 59.430 43.478 3.32 4.44 0.00 3.33
6310 11700 3.809279 TCTGTTGCACTATGTGTCACTTG 59.191 43.478 4.27 0.00 35.75 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.