Multiple sequence alignment - TraesCS5A01G158500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G158500 chr5A 100.000 4352 0 0 1 4352 338386788 338391139 0.000000e+00 8037.0
1 TraesCS5A01G158500 chr5A 89.721 1576 113 28 1609 3159 338285176 338286727 0.000000e+00 1967.0
2 TraesCS5A01G158500 chr5A 89.629 781 71 7 2324 3098 338245068 338245844 0.000000e+00 985.0
3 TraesCS5A01G158500 chr5A 88.264 622 45 11 1711 2328 338239325 338239922 0.000000e+00 719.0
4 TraesCS5A01G158500 chr5A 86.679 563 59 14 1122 1672 338238769 338239327 1.030000e-170 610.0
5 TraesCS5A01G158500 chr5A 88.358 335 24 10 948 1273 338284465 338284793 5.280000e-104 388.0
6 TraesCS5A01G158500 chr5A 94.366 142 7 1 948 1088 338238635 338238776 2.640000e-52 217.0
7 TraesCS5A01G158500 chr5D 92.220 1928 107 14 815 2707 255369893 255371812 0.000000e+00 2689.0
8 TraesCS5A01G158500 chr5D 89.854 1577 110 27 1609 3159 255073856 255075408 0.000000e+00 1980.0
9 TraesCS5A01G158500 chr5D 93.874 604 20 8 2706 3297 255371879 255372477 0.000000e+00 894.0
10 TraesCS5A01G158500 chr5D 91.331 646 44 7 1855 2491 254839789 254840431 0.000000e+00 872.0
11 TraesCS5A01G158500 chr5D 89.744 663 43 8 2519 3159 254843560 254844219 0.000000e+00 824.0
12 TraesCS5A01G158500 chr5D 84.870 694 52 27 953 1621 255073129 255073794 0.000000e+00 651.0
13 TraesCS5A01G158500 chr5D 85.833 480 30 19 948 1402 254838723 254839189 3.940000e-130 475.0
14 TraesCS5A01G158500 chr5D 81.250 96 12 5 1 95 448665756 448665666 6.040000e-09 73.1
15 TraesCS5A01G158500 chr5D 82.667 75 11 1 1 75 348749176 348749248 1.010000e-06 65.8
16 TraesCS5A01G158500 chr4B 91.249 1874 119 13 868 2707 43224609 43222747 0.000000e+00 2510.0
17 TraesCS5A01G158500 chr4B 92.721 577 27 6 2706 3270 43222680 43222107 0.000000e+00 819.0
18 TraesCS5A01G158500 chr5B 90.914 1860 121 18 815 2639 286874868 286873022 0.000000e+00 2455.0
19 TraesCS5A01G158500 chr5B 89.377 1572 124 23 1609 3159 287439105 287437556 0.000000e+00 1938.0
20 TraesCS5A01G158500 chr5B 89.249 1479 103 31 1711 3159 287775711 287774259 0.000000e+00 1799.0
21 TraesCS5A01G158500 chr5B 86.008 1022 117 19 3340 4351 330004667 330005672 0.000000e+00 1072.0
22 TraesCS5A01G158500 chr5B 93.035 603 26 8 2706 3297 286872761 286872164 0.000000e+00 867.0
23 TraesCS5A01G158500 chr5B 84.348 690 62 28 948 1624 287439820 287439164 6.140000e-178 634.0
24 TraesCS5A01G158500 chr5B 92.401 329 21 3 1348 1672 287776037 287775709 2.370000e-127 466.0
25 TraesCS5A01G158500 chr5B 94.366 142 7 1 948 1088 287779713 287779572 2.640000e-52 217.0
26 TraesCS5A01G158500 chr5B 90.789 152 8 5 1125 1270 287779576 287779425 9.550000e-47 198.0
27 TraesCS5A01G158500 chr5B 87.261 157 16 4 476 632 286875012 286874860 4.470000e-40 176.0
28 TraesCS5A01G158500 chr7B 84.891 1198 146 25 1901 3087 645596740 645595567 0.000000e+00 1177.0
29 TraesCS5A01G158500 chr7B 86.193 1014 113 17 3347 4352 41025748 41024754 0.000000e+00 1072.0
30 TraesCS5A01G158500 chr7B 94.022 184 9 2 632 814 508656851 508657033 1.190000e-70 278.0
31 TraesCS5A01G158500 chr4D 87.061 997 96 22 3342 4329 308815867 308814895 0.000000e+00 1096.0
32 TraesCS5A01G158500 chr4D 97.500 40 1 0 229 268 455310891 455310852 7.810000e-08 69.4
33 TraesCS5A01G158500 chr4D 97.297 37 1 0 229 265 444261862 444261826 3.630000e-06 63.9
34 TraesCS5A01G158500 chr3D 86.095 1014 124 12 3344 4352 454230334 454229333 0.000000e+00 1075.0
35 TraesCS5A01G158500 chr3D 95.122 41 2 0 229 269 330942398 330942438 1.010000e-06 65.8
36 TraesCS5A01G158500 chr1A 85.968 1012 132 5 3346 4352 251008888 251007882 0.000000e+00 1074.0
37 TraesCS5A01G158500 chr1A 93.989 183 9 2 632 813 531881878 531882059 4.290000e-70 276.0
38 TraesCS5A01G158500 chr1A 97.297 37 1 0 229 265 53913167 53913203 3.630000e-06 63.9
39 TraesCS5A01G158500 chr3B 85.728 1016 120 18 3344 4352 596856314 596855317 0.000000e+00 1050.0
40 TraesCS5A01G158500 chr3B 84.118 1020 141 19 3342 4351 821666309 821667317 0.000000e+00 966.0
41 TraesCS5A01G158500 chr6A 85.404 1014 126 12 3344 4352 433972178 433973174 0.000000e+00 1033.0
42 TraesCS5A01G158500 chr6A 97.297 37 1 0 229 265 503384612 503384648 3.630000e-06 63.9
43 TraesCS5A01G158500 chr6A 97.297 37 1 0 229 265 612558274 612558310 3.630000e-06 63.9
44 TraesCS5A01G158500 chr7A 85.699 958 118 15 3400 4349 609170873 609171819 0.000000e+00 992.0
45 TraesCS5A01G158500 chr2D 79.978 899 97 48 936 1787 561889130 561888268 1.740000e-163 586.0
46 TraesCS5A01G158500 chr2D 89.286 56 4 2 3234 3289 168390665 168390718 7.810000e-08 69.4
47 TraesCS5A01G158500 chr2A 78.947 893 120 38 936 1787 701615620 701614755 2.960000e-151 545.0
48 TraesCS5A01G158500 chr2A 92.105 190 13 2 631 819 279443027 279442839 2.580000e-67 267.0
49 TraesCS5A01G158500 chr2B 82.236 653 74 32 1156 1787 670931227 670930596 3.860000e-145 525.0
50 TraesCS5A01G158500 chr2B 81.957 654 77 29 1156 1787 671002059 671001425 2.320000e-142 516.0
51 TraesCS5A01G158500 chr2B 94.505 182 9 1 631 812 53045588 53045768 3.310000e-71 279.0
52 TraesCS5A01G158500 chr2B 89.286 56 4 2 3234 3289 229857387 229857334 7.810000e-08 69.4
53 TraesCS5A01G158500 chr2B 97.297 37 1 0 229 265 541640469 541640505 3.630000e-06 63.9
54 TraesCS5A01G158500 chr2B 94.595 37 2 0 3341 3377 115205045 115205081 1.690000e-04 58.4
55 TraesCS5A01G158500 chr6B 93.956 182 9 2 632 812 40492647 40492827 1.540000e-69 274.0
56 TraesCS5A01G158500 chr6B 93.956 182 9 2 632 812 618131148 618130968 1.540000e-69 274.0
57 TraesCS5A01G158500 chr6B 92.593 189 12 2 625 812 634982977 634983164 1.990000e-68 270.0
58 TraesCS5A01G158500 chr4A 93.548 186 9 3 628 812 666932747 666932564 1.540000e-69 274.0
59 TraesCS5A01G158500 chr3A 93.956 182 9 2 632 812 660056132 660056312 1.540000e-69 274.0
60 TraesCS5A01G158500 chr7D 83.962 106 11 5 1 104 206994107 206994208 3.580000e-16 97.1
61 TraesCS5A01G158500 chr7D 95.122 41 1 1 229 269 66539357 66539396 3.630000e-06 63.9
62 TraesCS5A01G158500 chr7D 97.297 37 1 0 229 265 178139330 178139294 3.630000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G158500 chr5A 338386788 338391139 4351 False 8037.000000 8037 100.000000 1 4352 1 chr5A.!!$F2 4351
1 TraesCS5A01G158500 chr5A 338284465 338286727 2262 False 1177.500000 1967 89.039500 948 3159 2 chr5A.!!$F4 2211
2 TraesCS5A01G158500 chr5A 338245068 338245844 776 False 985.000000 985 89.629000 2324 3098 1 chr5A.!!$F1 774
3 TraesCS5A01G158500 chr5A 338238635 338239922 1287 False 515.333333 719 89.769667 948 2328 3 chr5A.!!$F3 1380
4 TraesCS5A01G158500 chr5D 255369893 255372477 2584 False 1791.500000 2689 93.047000 815 3297 2 chr5D.!!$F4 2482
5 TraesCS5A01G158500 chr5D 255073129 255075408 2279 False 1315.500000 1980 87.362000 953 3159 2 chr5D.!!$F3 2206
6 TraesCS5A01G158500 chr5D 254838723 254844219 5496 False 723.666667 872 88.969333 948 3159 3 chr5D.!!$F2 2211
7 TraesCS5A01G158500 chr4B 43222107 43224609 2502 True 1664.500000 2510 91.985000 868 3270 2 chr4B.!!$R1 2402
8 TraesCS5A01G158500 chr5B 287437556 287439820 2264 True 1286.000000 1938 86.862500 948 3159 2 chr5B.!!$R2 2211
9 TraesCS5A01G158500 chr5B 286872164 286875012 2848 True 1166.000000 2455 90.403333 476 3297 3 chr5B.!!$R1 2821
10 TraesCS5A01G158500 chr5B 330004667 330005672 1005 False 1072.000000 1072 86.008000 3340 4351 1 chr5B.!!$F1 1011
11 TraesCS5A01G158500 chr5B 287774259 287779713 5454 True 670.000000 1799 91.701250 948 3159 4 chr5B.!!$R3 2211
12 TraesCS5A01G158500 chr7B 645595567 645596740 1173 True 1177.000000 1177 84.891000 1901 3087 1 chr7B.!!$R2 1186
13 TraesCS5A01G158500 chr7B 41024754 41025748 994 True 1072.000000 1072 86.193000 3347 4352 1 chr7B.!!$R1 1005
14 TraesCS5A01G158500 chr4D 308814895 308815867 972 True 1096.000000 1096 87.061000 3342 4329 1 chr4D.!!$R1 987
15 TraesCS5A01G158500 chr3D 454229333 454230334 1001 True 1075.000000 1075 86.095000 3344 4352 1 chr3D.!!$R1 1008
16 TraesCS5A01G158500 chr1A 251007882 251008888 1006 True 1074.000000 1074 85.968000 3346 4352 1 chr1A.!!$R1 1006
17 TraesCS5A01G158500 chr3B 596855317 596856314 997 True 1050.000000 1050 85.728000 3344 4352 1 chr3B.!!$R1 1008
18 TraesCS5A01G158500 chr3B 821666309 821667317 1008 False 966.000000 966 84.118000 3342 4351 1 chr3B.!!$F1 1009
19 TraesCS5A01G158500 chr6A 433972178 433973174 996 False 1033.000000 1033 85.404000 3344 4352 1 chr6A.!!$F1 1008
20 TraesCS5A01G158500 chr7A 609170873 609171819 946 False 992.000000 992 85.699000 3400 4349 1 chr7A.!!$F1 949
21 TraesCS5A01G158500 chr2D 561888268 561889130 862 True 586.000000 586 79.978000 936 1787 1 chr2D.!!$R1 851
22 TraesCS5A01G158500 chr2A 701614755 701615620 865 True 545.000000 545 78.947000 936 1787 1 chr2A.!!$R2 851
23 TraesCS5A01G158500 chr2B 670930596 670931227 631 True 525.000000 525 82.236000 1156 1787 1 chr2B.!!$R2 631
24 TraesCS5A01G158500 chr2B 671001425 671002059 634 True 516.000000 516 81.957000 1156 1787 1 chr2B.!!$R3 631

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
914 919 0.028110 GTTGGCGAGAAATGCGGATC 59.972 55.000 0.0 0.0 0.0 3.36 F
946 957 0.250553 CCCAAAACCTACCACTCGCA 60.251 55.000 0.0 0.0 0.0 5.10 F
1072 1095 0.811281 CGGCATTCTCAAACCTTCCC 59.189 55.000 0.0 0.0 0.0 3.97 F
2913 9960 1.002544 CTGGTCTCACTCCTTCAACCC 59.997 57.143 0.0 0.0 0.0 4.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2781 9828 0.523072 TGAAGAGCGCTTTTGATGGC 59.477 50.000 18.99 3.64 33.61 4.40 R
2913 9960 1.000955 AGTTGGTAAGTCTCTGGTGCG 59.999 52.381 0.00 0.00 0.00 5.34 R
2985 10032 6.434018 AAGAAACTCATAATGCAGCTCTTC 57.566 37.500 0.00 0.00 0.00 2.87 R
4139 11255 2.945008 ACCGAAGTTGCCATGATATGTG 59.055 45.455 0.00 0.00 0.00 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.984002 TGTGACAAAACTTACATTGATGTTG 57.016 32.000 1.46 0.00 41.97 3.33
26 27 7.542890 TGTGACAAAACTTACATTGATGTTGT 58.457 30.769 1.46 0.00 41.97 3.32
27 28 7.487509 TGTGACAAAACTTACATTGATGTTGTG 59.512 33.333 1.46 0.00 41.97 3.33
28 29 7.487829 GTGACAAAACTTACATTGATGTTGTGT 59.512 33.333 1.46 12.82 41.73 3.72
29 30 7.487509 TGACAAAACTTACATTGATGTTGTGTG 59.512 33.333 15.73 6.98 39.90 3.82
30 31 7.542890 ACAAAACTTACATTGATGTTGTGTGA 58.457 30.769 1.46 0.00 38.82 3.58
31 32 8.031864 ACAAAACTTACATTGATGTTGTGTGAA 58.968 29.630 1.46 0.00 38.82 3.18
32 33 9.033481 CAAAACTTACATTGATGTTGTGTGAAT 57.967 29.630 1.46 0.00 41.97 2.57
33 34 8.578308 AAACTTACATTGATGTTGTGTGAATG 57.422 30.769 1.46 0.00 41.97 2.67
34 35 7.275888 ACTTACATTGATGTTGTGTGAATGT 57.724 32.000 1.46 0.00 41.97 2.71
35 36 7.140705 ACTTACATTGATGTTGTGTGAATGTG 58.859 34.615 1.46 0.00 41.97 3.21
36 37 4.300803 ACATTGATGTTGTGTGAATGTGC 58.699 39.130 0.00 0.00 37.90 4.57
37 38 4.038282 ACATTGATGTTGTGTGAATGTGCT 59.962 37.500 0.00 0.00 37.90 4.40
38 39 5.241285 ACATTGATGTTGTGTGAATGTGCTA 59.759 36.000 0.00 0.00 37.90 3.49
39 40 5.764487 TTGATGTTGTGTGAATGTGCTAA 57.236 34.783 0.00 0.00 0.00 3.09
40 41 5.764487 TGATGTTGTGTGAATGTGCTAAA 57.236 34.783 0.00 0.00 0.00 1.85
41 42 6.330004 TGATGTTGTGTGAATGTGCTAAAT 57.670 33.333 0.00 0.00 0.00 1.40
42 43 7.446001 TGATGTTGTGTGAATGTGCTAAATA 57.554 32.000 0.00 0.00 0.00 1.40
43 44 8.054152 TGATGTTGTGTGAATGTGCTAAATAT 57.946 30.769 0.00 0.00 0.00 1.28
44 45 8.522003 TGATGTTGTGTGAATGTGCTAAATATT 58.478 29.630 0.00 0.00 0.00 1.28
45 46 9.357652 GATGTTGTGTGAATGTGCTAAATATTT 57.642 29.630 5.89 5.89 0.00 1.40
46 47 9.709495 ATGTTGTGTGAATGTGCTAAATATTTT 57.291 25.926 5.91 0.00 0.00 1.82
47 48 9.539825 TGTTGTGTGAATGTGCTAAATATTTTT 57.460 25.926 5.91 0.00 0.00 1.94
49 50 9.755804 TTGTGTGAATGTGCTAAATATTTTTCA 57.244 25.926 5.91 6.35 0.00 2.69
50 51 9.409312 TGTGTGAATGTGCTAAATATTTTTCAG 57.591 29.630 5.91 0.00 0.00 3.02
51 52 8.863049 GTGTGAATGTGCTAAATATTTTTCAGG 58.137 33.333 5.91 0.00 0.00 3.86
52 53 8.801299 TGTGAATGTGCTAAATATTTTTCAGGA 58.199 29.630 5.91 0.00 0.00 3.86
53 54 9.807649 GTGAATGTGCTAAATATTTTTCAGGAT 57.192 29.630 5.91 0.00 0.00 3.24
93 94 7.686438 AATTGTATAACATGAGTTCAGTGCA 57.314 32.000 0.00 0.00 39.15 4.57
94 95 6.480524 TTGTATAACATGAGTTCAGTGCAC 57.519 37.500 9.40 9.40 39.15 4.57
95 96 4.935205 TGTATAACATGAGTTCAGTGCACC 59.065 41.667 14.63 0.00 39.15 5.01
96 97 1.229428 AACATGAGTTCAGTGCACCG 58.771 50.000 14.63 2.63 30.46 4.94
97 98 0.603707 ACATGAGTTCAGTGCACCGG 60.604 55.000 14.63 6.49 0.00 5.28
98 99 1.672356 ATGAGTTCAGTGCACCGGC 60.672 57.895 14.63 1.49 41.68 6.13
129 130 2.430546 CGGAGCTTGAGCCTGTATAG 57.569 55.000 0.00 0.00 43.38 1.31
130 131 1.957177 CGGAGCTTGAGCCTGTATAGA 59.043 52.381 0.00 0.00 43.38 1.98
131 132 2.030363 CGGAGCTTGAGCCTGTATAGAG 60.030 54.545 0.00 0.00 43.38 2.43
132 133 3.226777 GGAGCTTGAGCCTGTATAGAGA 58.773 50.000 0.00 0.00 43.38 3.10
133 134 3.639094 GGAGCTTGAGCCTGTATAGAGAA 59.361 47.826 0.00 0.00 43.38 2.87
134 135 4.100189 GGAGCTTGAGCCTGTATAGAGAAA 59.900 45.833 0.00 0.00 43.38 2.52
135 136 5.395768 GGAGCTTGAGCCTGTATAGAGAAAA 60.396 44.000 0.00 0.00 43.38 2.29
136 137 5.669477 AGCTTGAGCCTGTATAGAGAAAAG 58.331 41.667 0.00 0.00 43.38 2.27
137 138 4.272261 GCTTGAGCCTGTATAGAGAAAAGC 59.728 45.833 0.00 4.67 34.31 3.51
138 139 5.420725 TTGAGCCTGTATAGAGAAAAGCA 57.579 39.130 0.00 0.00 0.00 3.91
139 140 4.759782 TGAGCCTGTATAGAGAAAAGCAC 58.240 43.478 0.00 0.00 0.00 4.40
140 141 4.222810 TGAGCCTGTATAGAGAAAAGCACA 59.777 41.667 0.00 0.00 0.00 4.57
141 142 4.764172 AGCCTGTATAGAGAAAAGCACAG 58.236 43.478 0.00 0.00 34.54 3.66
142 143 4.223923 AGCCTGTATAGAGAAAAGCACAGT 59.776 41.667 0.00 0.00 33.23 3.55
143 144 5.422331 AGCCTGTATAGAGAAAAGCACAGTA 59.578 40.000 0.00 0.00 33.23 2.74
144 145 6.098982 AGCCTGTATAGAGAAAAGCACAGTAT 59.901 38.462 0.00 0.00 33.23 2.12
145 146 6.763610 GCCTGTATAGAGAAAAGCACAGTATT 59.236 38.462 0.00 0.00 33.23 1.89
146 147 7.281100 GCCTGTATAGAGAAAAGCACAGTATTT 59.719 37.037 0.00 0.00 33.23 1.40
147 148 9.167311 CCTGTATAGAGAAAAGCACAGTATTTT 57.833 33.333 0.00 0.00 33.23 1.82
164 165 2.978156 TTTTTCTCTCATGGGCCAGT 57.022 45.000 13.78 0.00 0.00 4.00
165 166 2.205022 TTTTCTCTCATGGGCCAGTG 57.795 50.000 13.78 10.85 0.00 3.66
166 167 1.067295 TTTCTCTCATGGGCCAGTGT 58.933 50.000 13.78 0.00 0.00 3.55
167 168 0.325933 TTCTCTCATGGGCCAGTGTG 59.674 55.000 13.78 5.71 0.00 3.82
168 169 1.077930 CTCTCATGGGCCAGTGTGG 60.078 63.158 13.78 8.41 41.55 4.17
169 170 1.845627 CTCTCATGGGCCAGTGTGGT 61.846 60.000 13.78 0.00 40.46 4.16
170 171 1.377725 CTCATGGGCCAGTGTGGTC 60.378 63.158 13.78 0.00 42.67 4.02
171 172 1.845627 CTCATGGGCCAGTGTGGTCT 61.846 60.000 13.78 0.00 43.05 3.85
172 173 1.377725 CATGGGCCAGTGTGGTCTC 60.378 63.158 13.78 0.00 43.05 3.36
173 174 1.847506 ATGGGCCAGTGTGGTCTCA 60.848 57.895 13.78 0.00 43.05 3.27
174 175 1.426251 ATGGGCCAGTGTGGTCTCAA 61.426 55.000 13.78 0.00 43.05 3.02
175 176 1.380302 GGGCCAGTGTGGTCTCAAT 59.620 57.895 4.39 0.00 43.05 2.57
176 177 0.251341 GGGCCAGTGTGGTCTCAATT 60.251 55.000 4.39 0.00 43.05 2.32
177 178 0.883833 GGCCAGTGTGGTCTCAATTG 59.116 55.000 0.00 0.00 39.55 2.32
178 179 1.609208 GCCAGTGTGGTCTCAATTGT 58.391 50.000 5.13 0.00 40.46 2.71
179 180 2.552155 GGCCAGTGTGGTCTCAATTGTA 60.552 50.000 5.13 0.00 39.55 2.41
180 181 3.146066 GCCAGTGTGGTCTCAATTGTAA 58.854 45.455 5.13 0.00 40.46 2.41
181 182 3.568007 GCCAGTGTGGTCTCAATTGTAAA 59.432 43.478 5.13 0.00 40.46 2.01
182 183 4.556699 GCCAGTGTGGTCTCAATTGTAAAC 60.557 45.833 5.13 2.55 40.46 2.01
183 184 4.821805 CCAGTGTGGTCTCAATTGTAAACT 59.178 41.667 5.13 0.00 31.35 2.66
184 185 5.277974 CCAGTGTGGTCTCAATTGTAAACTG 60.278 44.000 5.13 10.18 31.35 3.16
185 186 4.821805 AGTGTGGTCTCAATTGTAAACTGG 59.178 41.667 5.13 0.00 0.00 4.00
186 187 4.023193 GTGTGGTCTCAATTGTAAACTGGG 60.023 45.833 5.13 0.00 0.00 4.45
187 188 3.057526 GTGGTCTCAATTGTAAACTGGGC 60.058 47.826 5.13 0.00 0.00 5.36
188 189 2.161609 GGTCTCAATTGTAAACTGGGCG 59.838 50.000 5.13 0.00 0.00 6.13
189 190 2.161609 GTCTCAATTGTAAACTGGGCGG 59.838 50.000 5.13 0.00 0.00 6.13
190 191 1.472480 CTCAATTGTAAACTGGGCGGG 59.528 52.381 5.13 0.00 0.00 6.13
191 192 0.108851 CAATTGTAAACTGGGCGGGC 60.109 55.000 0.00 0.00 0.00 6.13
192 193 1.254975 AATTGTAAACTGGGCGGGCC 61.255 55.000 14.65 14.65 0.00 5.80
193 194 2.433646 ATTGTAAACTGGGCGGGCCA 62.434 55.000 22.99 22.99 37.98 5.36
194 195 2.044352 GTAAACTGGGCGGGCCAT 60.044 61.111 24.64 12.11 37.98 4.40
195 196 2.044451 TAAACTGGGCGGGCCATG 60.044 61.111 24.64 18.99 37.98 3.66
196 197 3.653664 TAAACTGGGCGGGCCATGG 62.654 63.158 24.64 15.67 37.98 3.66
216 217 2.730550 CCTGTTTGGCCTTGCTTAAG 57.269 50.000 3.32 0.00 0.00 1.85
217 218 1.337167 CCTGTTTGGCCTTGCTTAAGC 60.337 52.381 20.84 20.84 42.50 3.09
218 219 1.615392 CTGTTTGGCCTTGCTTAAGCT 59.385 47.619 26.90 0.00 42.66 3.74
219 220 1.613437 TGTTTGGCCTTGCTTAAGCTC 59.387 47.619 26.90 13.47 42.66 4.09
220 221 1.067565 GTTTGGCCTTGCTTAAGCTCC 60.068 52.381 26.90 20.74 42.66 4.70
221 222 0.960364 TTGGCCTTGCTTAAGCTCCG 60.960 55.000 26.90 14.82 42.66 4.63
222 223 2.765356 GGCCTTGCTTAAGCTCCGC 61.765 63.158 26.90 22.29 42.66 5.54
223 224 2.765356 GCCTTGCTTAAGCTCCGCC 61.765 63.158 26.90 9.06 42.66 6.13
224 225 1.377202 CCTTGCTTAAGCTCCGCCA 60.377 57.895 26.90 3.85 42.66 5.69
225 226 1.372087 CCTTGCTTAAGCTCCGCCAG 61.372 60.000 26.90 12.87 42.66 4.85
226 227 0.674895 CTTGCTTAAGCTCCGCCAGT 60.675 55.000 26.90 0.00 42.66 4.00
227 228 0.955428 TTGCTTAAGCTCCGCCAGTG 60.955 55.000 26.90 0.00 42.66 3.66
228 229 2.109126 GCTTAAGCTCCGCCAGTGG 61.109 63.158 20.38 4.20 38.21 4.00
229 230 1.450312 CTTAAGCTCCGCCAGTGGG 60.450 63.158 12.15 0.59 37.18 4.61
230 231 2.185310 CTTAAGCTCCGCCAGTGGGT 62.185 60.000 12.15 0.00 36.17 4.51
231 232 0.905809 TTAAGCTCCGCCAGTGGGTA 60.906 55.000 12.15 0.00 36.17 3.69
232 233 1.327690 TAAGCTCCGCCAGTGGGTAG 61.328 60.000 12.15 0.00 36.17 3.18
233 234 4.840005 GCTCCGCCAGTGGGTAGC 62.840 72.222 12.15 5.41 36.17 3.58
234 235 3.390521 CTCCGCCAGTGGGTAGCA 61.391 66.667 12.15 0.00 36.17 3.49
235 236 3.665675 CTCCGCCAGTGGGTAGCAC 62.666 68.421 12.15 0.00 36.17 4.40
236 237 3.706373 CCGCCAGTGGGTAGCACT 61.706 66.667 12.15 0.00 36.17 4.40
237 238 2.355986 CCGCCAGTGGGTAGCACTA 61.356 63.158 12.15 0.00 36.17 2.74
238 239 1.153628 CGCCAGTGGGTAGCACTAC 60.154 63.158 12.15 0.00 36.17 2.73
239 240 1.884075 CGCCAGTGGGTAGCACTACA 61.884 60.000 12.15 0.00 37.78 2.74
240 241 0.323629 GCCAGTGGGTAGCACTACAA 59.676 55.000 12.15 0.00 37.78 2.41
241 242 1.676014 GCCAGTGGGTAGCACTACAAG 60.676 57.143 12.15 0.00 37.78 3.16
242 243 1.676014 CCAGTGGGTAGCACTACAAGC 60.676 57.143 0.00 0.00 37.78 4.01
243 244 1.001974 CAGTGGGTAGCACTACAAGCA 59.998 52.381 9.87 0.00 37.78 3.91
244 245 1.002087 AGTGGGTAGCACTACAAGCAC 59.998 52.381 9.87 0.00 37.78 4.40
245 246 0.323629 TGGGTAGCACTACAAGCACC 59.676 55.000 9.87 2.33 37.78 5.01
246 247 0.739813 GGGTAGCACTACAAGCACCG 60.740 60.000 9.87 0.00 37.78 4.94
247 248 0.739813 GGTAGCACTACAAGCACCGG 60.740 60.000 0.00 0.00 37.78 5.28
248 249 0.037605 GTAGCACTACAAGCACCGGT 60.038 55.000 0.00 0.00 36.15 5.28
249 250 0.037697 TAGCACTACAAGCACCGGTG 60.038 55.000 30.66 30.66 0.00 4.94
260 261 3.476740 CACCGGTGCACCAGATATT 57.523 52.632 34.16 5.34 35.14 1.28
261 262 1.299541 CACCGGTGCACCAGATATTC 58.700 55.000 34.16 6.04 35.14 1.75
262 263 1.134401 CACCGGTGCACCAGATATTCT 60.134 52.381 34.16 4.14 35.14 2.40
263 264 1.139058 ACCGGTGCACCAGATATTCTC 59.861 52.381 34.16 4.51 35.14 2.87
264 265 1.541233 CCGGTGCACCAGATATTCTCC 60.541 57.143 34.16 3.99 35.14 3.71
265 266 1.869754 CGGTGCACCAGATATTCTCCG 60.870 57.143 34.16 12.97 35.14 4.63
266 267 1.221414 GTGCACCAGATATTCTCCGC 58.779 55.000 5.22 0.00 0.00 5.54
267 268 1.123077 TGCACCAGATATTCTCCGCT 58.877 50.000 0.00 0.00 0.00 5.52
268 269 1.069204 TGCACCAGATATTCTCCGCTC 59.931 52.381 0.00 0.00 0.00 5.03
269 270 1.606737 GCACCAGATATTCTCCGCTCC 60.607 57.143 0.00 0.00 0.00 4.70
270 271 1.688735 CACCAGATATTCTCCGCTCCA 59.311 52.381 0.00 0.00 0.00 3.86
271 272 2.301296 CACCAGATATTCTCCGCTCCAT 59.699 50.000 0.00 0.00 0.00 3.41
272 273 2.564947 ACCAGATATTCTCCGCTCCATC 59.435 50.000 0.00 0.00 0.00 3.51
273 274 2.416566 CCAGATATTCTCCGCTCCATCG 60.417 54.545 0.00 0.00 0.00 3.84
274 275 1.203523 AGATATTCTCCGCTCCATCGC 59.796 52.381 0.00 0.00 0.00 4.58
275 276 0.247736 ATATTCTCCGCTCCATCGCC 59.752 55.000 0.00 0.00 0.00 5.54
276 277 0.827925 TATTCTCCGCTCCATCGCCT 60.828 55.000 0.00 0.00 0.00 5.52
277 278 2.374830 ATTCTCCGCTCCATCGCCTG 62.375 60.000 0.00 0.00 0.00 4.85
278 279 3.842923 CTCCGCTCCATCGCCTGT 61.843 66.667 0.00 0.00 0.00 4.00
279 280 3.781770 CTCCGCTCCATCGCCTGTC 62.782 68.421 0.00 0.00 0.00 3.51
280 281 4.899239 CCGCTCCATCGCCTGTCC 62.899 72.222 0.00 0.00 0.00 4.02
281 282 3.842923 CGCTCCATCGCCTGTCCT 61.843 66.667 0.00 0.00 0.00 3.85
282 283 2.107953 GCTCCATCGCCTGTCCTC 59.892 66.667 0.00 0.00 0.00 3.71
283 284 2.415010 CTCCATCGCCTGTCCTCG 59.585 66.667 0.00 0.00 0.00 4.63
284 285 2.362503 TCCATCGCCTGTCCTCGT 60.363 61.111 0.00 0.00 0.00 4.18
285 286 1.949847 CTCCATCGCCTGTCCTCGTT 61.950 60.000 0.00 0.00 0.00 3.85
286 287 1.079127 CCATCGCCTGTCCTCGTTT 60.079 57.895 0.00 0.00 0.00 3.60
287 288 1.361668 CCATCGCCTGTCCTCGTTTG 61.362 60.000 0.00 0.00 0.00 2.93
288 289 1.079127 ATCGCCTGTCCTCGTTTGG 60.079 57.895 0.00 0.00 0.00 3.28
289 290 1.541310 ATCGCCTGTCCTCGTTTGGA 61.541 55.000 0.00 0.00 0.00 3.53
290 291 1.079127 CGCCTGTCCTCGTTTGGAT 60.079 57.895 0.00 0.00 38.52 3.41
291 292 1.084370 CGCCTGTCCTCGTTTGGATC 61.084 60.000 0.00 0.00 38.52 3.36
292 293 0.250513 GCCTGTCCTCGTTTGGATCT 59.749 55.000 0.00 0.00 38.52 2.75
293 294 1.480954 GCCTGTCCTCGTTTGGATCTA 59.519 52.381 0.00 0.00 38.52 1.98
294 295 2.482142 GCCTGTCCTCGTTTGGATCTAG 60.482 54.545 0.00 0.00 38.52 2.43
295 296 2.482142 CCTGTCCTCGTTTGGATCTAGC 60.482 54.545 0.00 0.00 38.52 3.42
296 297 1.480954 TGTCCTCGTTTGGATCTAGCC 59.519 52.381 0.00 0.00 38.52 3.93
297 298 1.480954 GTCCTCGTTTGGATCTAGCCA 59.519 52.381 0.00 0.00 38.52 4.75
298 299 1.480954 TCCTCGTTTGGATCTAGCCAC 59.519 52.381 0.00 0.00 37.75 5.01
299 300 1.560923 CTCGTTTGGATCTAGCCACG 58.439 55.000 0.00 0.00 37.75 4.94
300 301 0.174845 TCGTTTGGATCTAGCCACGG 59.825 55.000 7.40 0.00 37.75 4.94
301 302 1.429148 CGTTTGGATCTAGCCACGGC 61.429 60.000 0.00 0.00 37.75 5.68
311 312 2.357760 GCCACGGCGGTTCAGTTA 60.358 61.111 13.24 0.00 36.97 2.24
312 313 2.388232 GCCACGGCGGTTCAGTTAG 61.388 63.158 13.24 0.00 36.97 2.34
313 314 2.388232 CCACGGCGGTTCAGTTAGC 61.388 63.158 13.24 0.00 0.00 3.09
314 315 1.374252 CACGGCGGTTCAGTTAGCT 60.374 57.895 13.24 0.00 0.00 3.32
315 316 0.949105 CACGGCGGTTCAGTTAGCTT 60.949 55.000 13.24 0.00 0.00 3.74
316 317 0.250166 ACGGCGGTTCAGTTAGCTTT 60.250 50.000 13.24 0.00 0.00 3.51
317 318 0.872388 CGGCGGTTCAGTTAGCTTTT 59.128 50.000 0.00 0.00 0.00 2.27
318 319 1.399727 CGGCGGTTCAGTTAGCTTTTG 60.400 52.381 0.00 0.00 0.00 2.44
319 320 1.607148 GGCGGTTCAGTTAGCTTTTGT 59.393 47.619 0.00 0.00 0.00 2.83
320 321 2.809696 GGCGGTTCAGTTAGCTTTTGTA 59.190 45.455 0.00 0.00 0.00 2.41
321 322 3.251487 GGCGGTTCAGTTAGCTTTTGTAA 59.749 43.478 0.00 0.00 0.00 2.41
322 323 4.261280 GGCGGTTCAGTTAGCTTTTGTAAA 60.261 41.667 0.00 0.00 0.00 2.01
323 324 5.275494 GCGGTTCAGTTAGCTTTTGTAAAA 58.725 37.500 0.00 0.00 0.00 1.52
324 325 5.744819 GCGGTTCAGTTAGCTTTTGTAAAAA 59.255 36.000 0.00 0.00 0.00 1.94
325 326 6.291427 GCGGTTCAGTTAGCTTTTGTAAAAAC 60.291 38.462 0.00 0.00 0.00 2.43
326 327 6.970613 CGGTTCAGTTAGCTTTTGTAAAAACT 59.029 34.615 0.00 0.00 0.00 2.66
327 328 8.124199 CGGTTCAGTTAGCTTTTGTAAAAACTA 58.876 33.333 0.00 0.00 0.00 2.24
328 329 9.447040 GGTTCAGTTAGCTTTTGTAAAAACTAG 57.553 33.333 0.00 0.00 30.80 2.57
329 330 9.999009 GTTCAGTTAGCTTTTGTAAAAACTAGT 57.001 29.630 0.00 0.00 30.80 2.57
331 332 9.386010 TCAGTTAGCTTTTGTAAAAACTAGTCA 57.614 29.630 0.00 0.00 30.80 3.41
332 333 9.651718 CAGTTAGCTTTTGTAAAAACTAGTCAG 57.348 33.333 0.00 0.00 30.80 3.51
333 334 8.343366 AGTTAGCTTTTGTAAAAACTAGTCAGC 58.657 33.333 0.00 0.00 30.80 4.26
334 335 6.073327 AGCTTTTGTAAAAACTAGTCAGCC 57.927 37.500 0.00 0.00 0.00 4.85
335 336 4.909880 GCTTTTGTAAAAACTAGTCAGCCG 59.090 41.667 0.00 0.00 0.00 5.52
336 337 4.477302 TTTGTAAAAACTAGTCAGCCGC 57.523 40.909 0.00 0.00 0.00 6.53
337 338 3.114668 TGTAAAAACTAGTCAGCCGCA 57.885 42.857 0.00 0.00 0.00 5.69
338 339 3.468770 TGTAAAAACTAGTCAGCCGCAA 58.531 40.909 0.00 0.00 0.00 4.85
339 340 3.878103 TGTAAAAACTAGTCAGCCGCAAA 59.122 39.130 0.00 0.00 0.00 3.68
340 341 4.335874 TGTAAAAACTAGTCAGCCGCAAAA 59.664 37.500 0.00 0.00 0.00 2.44
341 342 3.349488 AAAACTAGTCAGCCGCAAAAC 57.651 42.857 0.00 0.00 0.00 2.43
342 343 1.235724 AACTAGTCAGCCGCAAAACC 58.764 50.000 0.00 0.00 0.00 3.27
343 344 0.107831 ACTAGTCAGCCGCAAAACCA 59.892 50.000 0.00 0.00 0.00 3.67
344 345 0.798776 CTAGTCAGCCGCAAAACCAG 59.201 55.000 0.00 0.00 0.00 4.00
345 346 0.394938 TAGTCAGCCGCAAAACCAGA 59.605 50.000 0.00 0.00 0.00 3.86
346 347 0.465460 AGTCAGCCGCAAAACCAGAA 60.465 50.000 0.00 0.00 0.00 3.02
347 348 0.383949 GTCAGCCGCAAAACCAGAAA 59.616 50.000 0.00 0.00 0.00 2.52
348 349 1.107114 TCAGCCGCAAAACCAGAAAA 58.893 45.000 0.00 0.00 0.00 2.29
349 350 1.478510 TCAGCCGCAAAACCAGAAAAA 59.521 42.857 0.00 0.00 0.00 1.94
364 365 2.517402 AAAAAGGCCGGCGTGACA 60.517 55.556 24.39 0.00 0.00 3.58
365 366 1.901464 AAAAAGGCCGGCGTGACAT 60.901 52.632 24.39 3.33 0.00 3.06
366 367 2.141122 AAAAAGGCCGGCGTGACATG 62.141 55.000 24.39 0.00 0.00 3.21
378 379 2.675767 GTGACATGCACAGTCAACAG 57.324 50.000 21.38 0.00 46.50 3.16
379 380 1.265095 GTGACATGCACAGTCAACAGG 59.735 52.381 21.38 0.00 46.50 4.00
380 381 0.877071 GACATGCACAGTCAACAGGG 59.123 55.000 14.42 0.00 36.06 4.45
381 382 0.473755 ACATGCACAGTCAACAGGGA 59.526 50.000 0.00 0.00 0.00 4.20
382 383 1.133823 ACATGCACAGTCAACAGGGAA 60.134 47.619 0.00 0.00 0.00 3.97
383 384 1.955778 CATGCACAGTCAACAGGGAAA 59.044 47.619 0.00 0.00 0.00 3.13
384 385 2.363306 TGCACAGTCAACAGGGAAAT 57.637 45.000 0.00 0.00 0.00 2.17
385 386 2.665165 TGCACAGTCAACAGGGAAATT 58.335 42.857 0.00 0.00 0.00 1.82
386 387 2.361757 TGCACAGTCAACAGGGAAATTG 59.638 45.455 0.00 0.00 0.00 2.32
387 388 2.622942 GCACAGTCAACAGGGAAATTGA 59.377 45.455 0.00 0.00 32.44 2.57
388 389 3.256631 GCACAGTCAACAGGGAAATTGAT 59.743 43.478 0.00 0.00 37.19 2.57
389 390 4.262164 GCACAGTCAACAGGGAAATTGATT 60.262 41.667 0.00 0.00 37.19 2.57
390 391 5.464168 CACAGTCAACAGGGAAATTGATTC 58.536 41.667 0.00 0.00 37.19 2.52
391 392 4.216257 ACAGTCAACAGGGAAATTGATTCG 59.784 41.667 0.00 0.00 39.05 3.34
419 420 6.806668 AAAAAGAACAGGAAATTGGGAGAA 57.193 33.333 0.00 0.00 0.00 2.87
420 421 6.806668 AAAAGAACAGGAAATTGGGAGAAA 57.193 33.333 0.00 0.00 0.00 2.52
421 422 6.806668 AAAGAACAGGAAATTGGGAGAAAA 57.193 33.333 0.00 0.00 0.00 2.29
422 423 7.379059 AAAGAACAGGAAATTGGGAGAAAAT 57.621 32.000 0.00 0.00 0.00 1.82
423 424 7.379059 AAGAACAGGAAATTGGGAGAAAATT 57.621 32.000 0.00 0.00 0.00 1.82
424 425 8.491045 AAGAACAGGAAATTGGGAGAAAATTA 57.509 30.769 0.00 0.00 0.00 1.40
425 426 8.491045 AGAACAGGAAATTGGGAGAAAATTAA 57.509 30.769 0.00 0.00 0.00 1.40
426 427 8.933653 AGAACAGGAAATTGGGAGAAAATTAAA 58.066 29.630 0.00 0.00 0.00 1.52
427 428 9.554395 GAACAGGAAATTGGGAGAAAATTAAAA 57.446 29.630 0.00 0.00 0.00 1.52
429 430 9.506018 ACAGGAAATTGGGAGAAAATTAAAATG 57.494 29.630 0.00 0.00 0.00 2.32
430 431 8.949177 CAGGAAATTGGGAGAAAATTAAAATGG 58.051 33.333 0.00 0.00 0.00 3.16
431 432 8.108999 AGGAAATTGGGAGAAAATTAAAATGGG 58.891 33.333 0.00 0.00 0.00 4.00
432 433 7.339212 GGAAATTGGGAGAAAATTAAAATGGGG 59.661 37.037 0.00 0.00 0.00 4.96
433 434 6.968400 ATTGGGAGAAAATTAAAATGGGGT 57.032 33.333 0.00 0.00 0.00 4.95
434 435 8.456221 AATTGGGAGAAAATTAAAATGGGGTA 57.544 30.769 0.00 0.00 0.00 3.69
435 436 7.873699 TTGGGAGAAAATTAAAATGGGGTAA 57.126 32.000 0.00 0.00 0.00 2.85
436 437 7.873699 TGGGAGAAAATTAAAATGGGGTAAA 57.126 32.000 0.00 0.00 0.00 2.01
437 438 8.276453 TGGGAGAAAATTAAAATGGGGTAAAA 57.724 30.769 0.00 0.00 0.00 1.52
438 439 8.895624 TGGGAGAAAATTAAAATGGGGTAAAAT 58.104 29.630 0.00 0.00 0.00 1.82
439 440 9.173021 GGGAGAAAATTAAAATGGGGTAAAATG 57.827 33.333 0.00 0.00 0.00 2.32
440 441 9.733556 GGAGAAAATTAAAATGGGGTAAAATGT 57.266 29.630 0.00 0.00 0.00 2.71
442 443 9.513906 AGAAAATTAAAATGGGGTAAAATGTGG 57.486 29.630 0.00 0.00 0.00 4.17
443 444 7.695480 AAATTAAAATGGGGTAAAATGTGGC 57.305 32.000 0.00 0.00 0.00 5.01
444 445 5.825593 TTAAAATGGGGTAAAATGTGGCA 57.174 34.783 0.00 0.00 0.00 4.92
445 446 3.694043 AAATGGGGTAAAATGTGGCAC 57.306 42.857 11.55 11.55 0.00 5.01
446 447 2.317371 ATGGGGTAAAATGTGGCACA 57.683 45.000 24.36 24.36 0.00 4.57
447 448 2.317371 TGGGGTAAAATGTGGCACAT 57.683 45.000 26.78 26.78 44.52 3.21
448 449 3.458044 TGGGGTAAAATGTGGCACATA 57.542 42.857 31.58 15.18 44.52 2.29
449 450 3.987745 TGGGGTAAAATGTGGCACATAT 58.012 40.909 31.58 24.41 43.60 1.78
540 541 8.731275 TTCACTCAAAACAGTAAAAGAGATGA 57.269 30.769 0.00 0.00 0.00 2.92
549 550 6.166982 ACAGTAAAAGAGATGAAGTACTGGC 58.833 40.000 11.96 0.00 41.65 4.85
553 554 7.885399 AGTAAAAGAGATGAAGTACTGGCAAAT 59.115 33.333 0.00 0.00 0.00 2.32
565 566 2.293399 ACTGGCAAATCGAACCTTTGAC 59.707 45.455 12.90 10.78 41.16 3.18
566 567 1.265635 TGGCAAATCGAACCTTTGACG 59.734 47.619 12.90 0.00 43.23 4.35
567 568 1.265905 GGCAAATCGAACCTTTGACGT 59.734 47.619 12.90 0.00 35.99 4.34
571 572 0.599204 ATCGAACCTTTGACGTGCGT 60.599 50.000 0.00 0.00 33.78 5.24
598 599 6.808212 TGCGTAATTACTACAACACTAAGGTC 59.192 38.462 13.56 0.00 0.00 3.85
602 603 9.351570 GTAATTACTACAACACTAAGGTCTGAC 57.648 37.037 8.41 0.00 0.00 3.51
612 613 1.949465 AAGGTCTGACGTTGGACAAC 58.051 50.000 14.29 5.14 37.92 3.32
618 619 2.364002 TCTGACGTTGGACAACAGATGA 59.636 45.455 14.74 5.28 41.20 2.92
622 623 4.021456 TGACGTTGGACAACAGATGATACT 60.021 41.667 14.74 0.00 41.20 2.12
626 627 7.952671 ACGTTGGACAACAGATGATACTATAT 58.047 34.615 14.74 0.00 41.20 0.86
632 633 9.929180 GGACAACAGATGATACTATATTTAGCA 57.071 33.333 0.00 0.00 0.00 3.49
646 647 9.326413 ACTATATTTAGCAAAAATGCTAGACGT 57.674 29.630 10.12 0.00 46.49 4.34
649 650 5.789710 TTAGCAAAAATGCTAGACGTACC 57.210 39.130 10.12 0.00 46.49 3.34
650 651 2.671396 AGCAAAAATGCTAGACGTACCG 59.329 45.455 0.67 0.00 44.28 4.02
651 652 2.222953 GCAAAAATGCTAGACGTACCGG 60.223 50.000 0.00 0.00 0.00 5.28
652 653 1.648504 AAAATGCTAGACGTACCGGC 58.351 50.000 0.00 0.00 33.59 6.13
654 655 0.822164 AATGCTAGACGTACCGGCTT 59.178 50.000 0.00 0.00 46.07 4.35
655 656 0.822164 ATGCTAGACGTACCGGCTTT 59.178 50.000 0.00 0.00 46.07 3.51
656 657 0.604578 TGCTAGACGTACCGGCTTTT 59.395 50.000 0.00 0.00 46.07 2.27
657 658 1.818060 TGCTAGACGTACCGGCTTTTA 59.182 47.619 0.00 0.00 46.07 1.52
658 659 2.188524 GCTAGACGTACCGGCTTTTAC 58.811 52.381 0.00 0.00 46.07 2.01
659 660 2.415893 GCTAGACGTACCGGCTTTTACA 60.416 50.000 0.00 0.00 46.07 2.41
660 661 2.358939 AGACGTACCGGCTTTTACAG 57.641 50.000 0.00 0.00 46.07 2.74
661 662 1.067354 AGACGTACCGGCTTTTACAGG 60.067 52.381 0.00 0.00 46.07 4.00
662 663 0.681175 ACGTACCGGCTTTTACAGGT 59.319 50.000 0.00 0.00 40.52 4.00
663 664 1.337167 ACGTACCGGCTTTTACAGGTC 60.337 52.381 0.00 0.00 38.12 3.85
664 665 1.067354 CGTACCGGCTTTTACAGGTCT 60.067 52.381 0.00 0.00 38.12 3.85
665 666 2.611224 CGTACCGGCTTTTACAGGTCTT 60.611 50.000 0.00 0.00 38.12 3.01
666 667 2.651382 ACCGGCTTTTACAGGTCTTT 57.349 45.000 0.00 0.00 29.76 2.52
667 668 3.775261 ACCGGCTTTTACAGGTCTTTA 57.225 42.857 0.00 0.00 29.76 1.85
668 669 3.405831 ACCGGCTTTTACAGGTCTTTAC 58.594 45.455 0.00 0.00 29.76 2.01
669 670 3.181452 ACCGGCTTTTACAGGTCTTTACA 60.181 43.478 0.00 0.00 29.76 2.41
670 671 3.435671 CCGGCTTTTACAGGTCTTTACAG 59.564 47.826 0.00 0.00 0.00 2.74
671 672 3.435671 CGGCTTTTACAGGTCTTTACAGG 59.564 47.826 0.00 0.00 0.00 4.00
672 673 3.190744 GGCTTTTACAGGTCTTTACAGGC 59.809 47.826 0.00 0.00 0.00 4.85
673 674 4.072839 GCTTTTACAGGTCTTTACAGGCT 58.927 43.478 0.00 0.00 0.00 4.58
674 675 4.154375 GCTTTTACAGGTCTTTACAGGCTC 59.846 45.833 0.00 0.00 0.00 4.70
675 676 3.975168 TTACAGGTCTTTACAGGCTCC 57.025 47.619 0.00 0.00 0.00 4.70
676 677 2.031495 ACAGGTCTTTACAGGCTCCT 57.969 50.000 0.00 0.00 0.00 3.69
677 678 2.339769 ACAGGTCTTTACAGGCTCCTT 58.660 47.619 0.00 0.00 0.00 3.36
678 679 2.303311 ACAGGTCTTTACAGGCTCCTTC 59.697 50.000 0.00 0.00 0.00 3.46
679 680 1.909986 AGGTCTTTACAGGCTCCTTCC 59.090 52.381 0.00 0.00 0.00 3.46
680 681 1.628846 GGTCTTTACAGGCTCCTTCCA 59.371 52.381 0.00 0.00 0.00 3.53
681 682 2.039879 GGTCTTTACAGGCTCCTTCCAA 59.960 50.000 0.00 0.00 0.00 3.53
682 683 3.497942 GGTCTTTACAGGCTCCTTCCAAA 60.498 47.826 0.00 0.00 0.00 3.28
683 684 3.502595 GTCTTTACAGGCTCCTTCCAAAC 59.497 47.826 0.00 0.00 0.00 2.93
684 685 3.394606 TCTTTACAGGCTCCTTCCAAACT 59.605 43.478 0.00 0.00 0.00 2.66
685 686 3.876309 TTACAGGCTCCTTCCAAACTT 57.124 42.857 0.00 0.00 0.00 2.66
686 687 2.755952 ACAGGCTCCTTCCAAACTTT 57.244 45.000 0.00 0.00 0.00 2.66
687 688 2.587522 ACAGGCTCCTTCCAAACTTTC 58.412 47.619 0.00 0.00 0.00 2.62
688 689 2.175715 ACAGGCTCCTTCCAAACTTTCT 59.824 45.455 0.00 0.00 0.00 2.52
689 690 3.394606 ACAGGCTCCTTCCAAACTTTCTA 59.605 43.478 0.00 0.00 0.00 2.10
690 691 4.141251 ACAGGCTCCTTCCAAACTTTCTAA 60.141 41.667 0.00 0.00 0.00 2.10
691 692 4.827284 CAGGCTCCTTCCAAACTTTCTAAA 59.173 41.667 0.00 0.00 0.00 1.85
692 693 4.827835 AGGCTCCTTCCAAACTTTCTAAAC 59.172 41.667 0.00 0.00 0.00 2.01
693 694 4.583073 GGCTCCTTCCAAACTTTCTAAACA 59.417 41.667 0.00 0.00 0.00 2.83
694 695 5.507482 GGCTCCTTCCAAACTTTCTAAACAC 60.507 44.000 0.00 0.00 0.00 3.32
695 696 5.067283 GCTCCTTCCAAACTTTCTAAACACA 59.933 40.000 0.00 0.00 0.00 3.72
696 697 6.445357 TCCTTCCAAACTTTCTAAACACAC 57.555 37.500 0.00 0.00 0.00 3.82
697 698 5.358725 TCCTTCCAAACTTTCTAAACACACC 59.641 40.000 0.00 0.00 0.00 4.16
698 699 5.451381 CCTTCCAAACTTTCTAAACACACCC 60.451 44.000 0.00 0.00 0.00 4.61
699 700 3.955551 TCCAAACTTTCTAAACACACCCC 59.044 43.478 0.00 0.00 0.00 4.95
700 701 3.069016 CCAAACTTTCTAAACACACCCCC 59.931 47.826 0.00 0.00 0.00 5.40
715 716 4.337013 CCCCCTGATTTCAACGGG 57.663 61.111 5.69 5.69 36.01 5.28
717 718 4.337013 CCCTGATTTCAACGGGGG 57.663 61.111 0.00 0.00 46.89 5.40
718 719 1.382629 CCCTGATTTCAACGGGGGT 59.617 57.895 0.00 0.00 46.89 4.95
719 720 0.965363 CCCTGATTTCAACGGGGGTG 60.965 60.000 0.00 0.00 46.89 4.61
720 721 0.965363 CCTGATTTCAACGGGGGTGG 60.965 60.000 0.00 0.00 0.00 4.61
721 722 0.965363 CTGATTTCAACGGGGGTGGG 60.965 60.000 0.00 0.00 0.00 4.61
722 723 1.680989 GATTTCAACGGGGGTGGGG 60.681 63.158 0.00 0.00 0.00 4.96
723 724 3.897681 ATTTCAACGGGGGTGGGGC 62.898 63.158 0.00 0.00 0.00 5.80
739 740 3.290776 GGCCGTGCCTCTACTAATG 57.709 57.895 7.58 0.00 46.69 1.90
740 741 0.750850 GGCCGTGCCTCTACTAATGA 59.249 55.000 7.58 0.00 46.69 2.57
741 742 1.538419 GGCCGTGCCTCTACTAATGAC 60.538 57.143 7.58 0.00 46.69 3.06
742 743 1.538419 GCCGTGCCTCTACTAATGACC 60.538 57.143 0.00 0.00 0.00 4.02
743 744 1.754803 CCGTGCCTCTACTAATGACCA 59.245 52.381 0.00 0.00 0.00 4.02
744 745 2.167693 CCGTGCCTCTACTAATGACCAA 59.832 50.000 0.00 0.00 0.00 3.67
745 746 3.181465 CCGTGCCTCTACTAATGACCAAT 60.181 47.826 0.00 0.00 0.00 3.16
746 747 4.442706 CGTGCCTCTACTAATGACCAATT 58.557 43.478 0.00 0.00 0.00 2.32
747 748 5.452776 CCGTGCCTCTACTAATGACCAATTA 60.453 44.000 0.00 0.00 0.00 1.40
748 749 6.046593 CGTGCCTCTACTAATGACCAATTAA 58.953 40.000 0.00 0.00 30.24 1.40
749 750 6.537301 CGTGCCTCTACTAATGACCAATTAAA 59.463 38.462 0.00 0.00 30.24 1.52
750 751 7.065324 CGTGCCTCTACTAATGACCAATTAAAA 59.935 37.037 0.00 0.00 30.24 1.52
751 752 8.736244 GTGCCTCTACTAATGACCAATTAAAAA 58.264 33.333 0.00 0.00 30.24 1.94
752 753 8.736244 TGCCTCTACTAATGACCAATTAAAAAC 58.264 33.333 0.00 0.00 30.24 2.43
753 754 8.188799 GCCTCTACTAATGACCAATTAAAAACC 58.811 37.037 0.00 0.00 30.24 3.27
754 755 8.395633 CCTCTACTAATGACCAATTAAAAACCG 58.604 37.037 0.00 0.00 30.24 4.44
755 756 7.754625 TCTACTAATGACCAATTAAAAACCGC 58.245 34.615 0.00 0.00 30.24 5.68
756 757 5.716094 ACTAATGACCAATTAAAAACCGCC 58.284 37.500 0.00 0.00 30.24 6.13
757 758 4.608948 AATGACCAATTAAAAACCGCCA 57.391 36.364 0.00 0.00 0.00 5.69
758 759 3.372660 TGACCAATTAAAAACCGCCAC 57.627 42.857 0.00 0.00 0.00 5.01
759 760 2.693591 TGACCAATTAAAAACCGCCACA 59.306 40.909 0.00 0.00 0.00 4.17
760 761 3.132289 TGACCAATTAAAAACCGCCACAA 59.868 39.130 0.00 0.00 0.00 3.33
761 762 3.459145 ACCAATTAAAAACCGCCACAAC 58.541 40.909 0.00 0.00 0.00 3.32
762 763 3.118738 ACCAATTAAAAACCGCCACAACA 60.119 39.130 0.00 0.00 0.00 3.33
763 764 3.246463 CCAATTAAAAACCGCCACAACAC 59.754 43.478 0.00 0.00 0.00 3.32
764 765 2.580966 TTAAAAACCGCCACAACACC 57.419 45.000 0.00 0.00 0.00 4.16
765 766 0.745468 TAAAAACCGCCACAACACCC 59.255 50.000 0.00 0.00 0.00 4.61
766 767 0.973496 AAAAACCGCCACAACACCCT 60.973 50.000 0.00 0.00 0.00 4.34
767 768 1.671901 AAAACCGCCACAACACCCTG 61.672 55.000 0.00 0.00 0.00 4.45
768 769 2.847366 AAACCGCCACAACACCCTGT 62.847 55.000 0.00 0.00 0.00 4.00
769 770 1.985460 AACCGCCACAACACCCTGTA 61.985 55.000 0.00 0.00 0.00 2.74
770 771 1.228003 CCGCCACAACACCCTGTAA 60.228 57.895 0.00 0.00 0.00 2.41
771 772 0.820074 CCGCCACAACACCCTGTAAA 60.820 55.000 0.00 0.00 0.00 2.01
772 773 0.309612 CGCCACAACACCCTGTAAAC 59.690 55.000 0.00 0.00 0.00 2.01
773 774 0.671796 GCCACAACACCCTGTAAACC 59.328 55.000 0.00 0.00 0.00 3.27
774 775 1.324383 CCACAACACCCTGTAAACCC 58.676 55.000 0.00 0.00 0.00 4.11
775 776 1.324383 CACAACACCCTGTAAACCCC 58.676 55.000 0.00 0.00 0.00 4.95
776 777 1.133606 CACAACACCCTGTAAACCCCT 60.134 52.381 0.00 0.00 0.00 4.79
777 778 1.144298 ACAACACCCTGTAAACCCCTC 59.856 52.381 0.00 0.00 0.00 4.30
778 779 1.144093 CAACACCCTGTAAACCCCTCA 59.856 52.381 0.00 0.00 0.00 3.86
779 780 1.755200 ACACCCTGTAAACCCCTCAT 58.245 50.000 0.00 0.00 0.00 2.90
780 781 1.633945 ACACCCTGTAAACCCCTCATC 59.366 52.381 0.00 0.00 0.00 2.92
781 782 1.064685 CACCCTGTAAACCCCTCATCC 60.065 57.143 0.00 0.00 0.00 3.51
782 783 0.551396 CCCTGTAAACCCCTCATCCC 59.449 60.000 0.00 0.00 0.00 3.85
783 784 1.596496 CCTGTAAACCCCTCATCCCT 58.404 55.000 0.00 0.00 0.00 4.20
784 785 1.212935 CCTGTAAACCCCTCATCCCTG 59.787 57.143 0.00 0.00 0.00 4.45
785 786 1.916181 CTGTAAACCCCTCATCCCTGT 59.084 52.381 0.00 0.00 0.00 4.00
786 787 3.112263 CTGTAAACCCCTCATCCCTGTA 58.888 50.000 0.00 0.00 0.00 2.74
787 788 3.521937 CTGTAAACCCCTCATCCCTGTAA 59.478 47.826 0.00 0.00 0.00 2.41
788 789 3.264964 TGTAAACCCCTCATCCCTGTAAC 59.735 47.826 0.00 0.00 0.00 2.50
789 790 1.296002 AACCCCTCATCCCTGTAACC 58.704 55.000 0.00 0.00 0.00 2.85
790 791 0.421904 ACCCCTCATCCCTGTAACCT 59.578 55.000 0.00 0.00 0.00 3.50
791 792 1.132500 CCCCTCATCCCTGTAACCTC 58.868 60.000 0.00 0.00 0.00 3.85
792 793 1.132500 CCCTCATCCCTGTAACCTCC 58.868 60.000 0.00 0.00 0.00 4.30
793 794 1.344496 CCCTCATCCCTGTAACCTCCT 60.344 57.143 0.00 0.00 0.00 3.69
794 795 1.765314 CCTCATCCCTGTAACCTCCTG 59.235 57.143 0.00 0.00 0.00 3.86
795 796 2.472029 CTCATCCCTGTAACCTCCTGT 58.528 52.381 0.00 0.00 0.00 4.00
796 797 3.630054 CCTCATCCCTGTAACCTCCTGTA 60.630 52.174 0.00 0.00 0.00 2.74
797 798 3.371965 TCATCCCTGTAACCTCCTGTAC 58.628 50.000 0.00 0.00 0.00 2.90
798 799 1.843368 TCCCTGTAACCTCCTGTACG 58.157 55.000 0.00 0.00 0.00 3.67
799 800 1.076024 TCCCTGTAACCTCCTGTACGT 59.924 52.381 0.00 0.00 0.00 3.57
800 801 1.203994 CCCTGTAACCTCCTGTACGTG 59.796 57.143 0.00 0.00 0.00 4.49
801 802 1.891150 CCTGTAACCTCCTGTACGTGT 59.109 52.381 0.00 0.00 0.00 4.49
802 803 3.084039 CCTGTAACCTCCTGTACGTGTA 58.916 50.000 0.00 0.00 0.00 2.90
803 804 3.128242 CCTGTAACCTCCTGTACGTGTAG 59.872 52.174 0.00 0.00 0.00 2.74
804 805 2.489329 TGTAACCTCCTGTACGTGTAGC 59.511 50.000 0.00 0.00 0.00 3.58
805 806 1.624336 AACCTCCTGTACGTGTAGCA 58.376 50.000 0.00 0.00 0.00 3.49
806 807 1.624336 ACCTCCTGTACGTGTAGCAA 58.376 50.000 0.00 0.00 0.00 3.91
807 808 1.965643 ACCTCCTGTACGTGTAGCAAA 59.034 47.619 0.00 0.00 0.00 3.68
808 809 2.029290 ACCTCCTGTACGTGTAGCAAAG 60.029 50.000 0.00 0.00 0.00 2.77
809 810 1.993370 CTCCTGTACGTGTAGCAAAGC 59.007 52.381 0.00 0.00 0.00 3.51
810 811 1.616865 TCCTGTACGTGTAGCAAAGCT 59.383 47.619 0.00 0.00 43.41 3.74
811 812 1.993370 CCTGTACGTGTAGCAAAGCTC 59.007 52.381 0.00 0.00 40.44 4.09
812 813 1.993370 CTGTACGTGTAGCAAAGCTCC 59.007 52.381 0.00 0.00 40.44 4.70
813 814 1.616865 TGTACGTGTAGCAAAGCTCCT 59.383 47.619 0.00 0.00 40.44 3.69
814 815 2.821378 TGTACGTGTAGCAAAGCTCCTA 59.179 45.455 0.00 0.00 40.44 2.94
815 816 3.446161 TGTACGTGTAGCAAAGCTCCTAT 59.554 43.478 0.00 0.00 40.44 2.57
816 817 4.641541 TGTACGTGTAGCAAAGCTCCTATA 59.358 41.667 0.00 0.00 40.44 1.31
817 818 4.939052 ACGTGTAGCAAAGCTCCTATAT 57.061 40.909 0.00 0.00 40.44 0.86
818 819 5.277857 ACGTGTAGCAAAGCTCCTATATT 57.722 39.130 0.00 0.00 40.44 1.28
819 820 5.671493 ACGTGTAGCAAAGCTCCTATATTT 58.329 37.500 0.00 0.00 40.44 1.40
820 821 6.812998 ACGTGTAGCAAAGCTCCTATATTTA 58.187 36.000 0.00 0.00 40.44 1.40
821 822 6.924060 ACGTGTAGCAAAGCTCCTATATTTAG 59.076 38.462 0.00 0.00 40.44 1.85
822 823 6.366332 CGTGTAGCAAAGCTCCTATATTTAGG 59.634 42.308 2.94 2.94 45.68 2.69
825 826 5.885465 AGCAAAGCTCCTATATTTAGGCAT 58.115 37.500 4.43 0.00 44.20 4.40
834 835 8.097662 GCTCCTATATTTAGGCATACTTTGAGT 58.902 37.037 4.43 0.00 44.20 3.41
892 897 0.830648 CTCGAGAGGCCCATTTACCA 59.169 55.000 6.58 0.00 0.00 3.25
907 912 4.743018 CCAGGGTTGGCGAGAAAT 57.257 55.556 0.00 0.00 37.73 2.17
914 919 0.028110 GTTGGCGAGAAATGCGGATC 59.972 55.000 0.00 0.00 0.00 3.36
915 920 1.095228 TTGGCGAGAAATGCGGATCC 61.095 55.000 0.00 0.00 0.00 3.36
946 957 0.250553 CCCAAAACCTACCACTCGCA 60.251 55.000 0.00 0.00 0.00 5.10
1059 1082 2.086869 CTCAAAGATGTCACCGGCATT 58.913 47.619 0.00 0.00 0.00 3.56
1072 1095 0.811281 CGGCATTCTCAAACCTTCCC 59.189 55.000 0.00 0.00 0.00 3.97
1096 1165 4.081917 GGTGAGCTTCCTCCTGCTATATAC 60.082 50.000 0.00 0.00 39.91 1.47
1099 1168 3.835395 AGCTTCCTCCTGCTATATACACC 59.165 47.826 0.00 0.00 37.81 4.16
1103 1172 4.152647 TCCTCCTGCTATATACACCTGTG 58.847 47.826 0.00 0.00 0.00 3.66
1104 1173 3.898123 CCTCCTGCTATATACACCTGTGT 59.102 47.826 8.17 8.17 46.87 3.72
1123 1198 3.381908 GTGTACTGATCGACATTCCCTCT 59.618 47.826 0.00 0.00 0.00 3.69
1132 1207 2.027192 CGACATTCCCTCTTTCCTTCCA 60.027 50.000 0.00 0.00 0.00 3.53
1152 1249 5.195185 TCCACATCATCAGTATGCAAATGT 58.805 37.500 0.00 0.00 31.59 2.71
1310 1491 8.263640 GTCATTCATATAATGGCCATAGACTCT 58.736 37.037 21.15 4.35 0.00 3.24
1340 1521 3.390639 AGCTGCCACTTATGAGCTCTATT 59.609 43.478 16.19 2.44 37.17 1.73
1416 4920 7.962964 TTCAGTACTTCCTTTAACTCACATG 57.037 36.000 0.00 0.00 0.00 3.21
1453 4966 4.816925 GGTGCATAGGTAACAGGAGAAATC 59.183 45.833 0.00 0.00 41.41 2.17
1582 5099 1.956869 TCTCTGCAAGATTCCAGGGA 58.043 50.000 0.00 0.00 45.62 4.20
1601 5118 1.003355 GTTGGCAGCAGAGCAGGTA 60.003 57.895 0.00 0.00 35.83 3.08
1633 5230 3.585732 CTGGGACCTGGTTAACTAAAGGA 59.414 47.826 21.66 5.86 33.78 3.36
1675 5278 7.298122 CAACTAACTAATCGAAGCAAATGTGT 58.702 34.615 0.00 0.00 0.00 3.72
1691 5294 7.750458 AGCAAATGTGTCAAAGTCATAAATACG 59.250 33.333 0.00 0.00 0.00 3.06
1697 5300 8.440059 TGTGTCAAAGTCATAAATACGTTGATC 58.560 33.333 0.00 5.84 43.68 2.92
1698 5301 7.630987 GTGTCAAAGTCATAAATACGTTGATCG 59.369 37.037 0.00 0.00 43.68 3.69
1718 5321 8.716674 TGATCGTAGGAAATACTAATTACCCT 57.283 34.615 0.00 0.00 34.50 4.34
1834 5437 5.488919 CCCTGACCCCAACATAGATACATAT 59.511 44.000 0.00 0.00 0.00 1.78
1861 5581 9.975218 ATGAAGGTAAATACTGACCTATTTTGT 57.025 29.630 0.00 0.00 45.64 2.83
1892 5612 1.238439 AACATTTCTGAGTGTGCCCG 58.762 50.000 0.00 0.00 0.00 6.13
1964 5690 3.084536 TCTGCCAAGTGCCATCATAAA 57.915 42.857 0.00 0.00 40.16 1.40
2102 5833 7.147915 GGCAATATCTGTGGATGGTTTAGAAAA 60.148 37.037 0.00 0.00 33.71 2.29
2139 5870 9.216117 ACAGACTACATTATGAAGGTAAACAAC 57.784 33.333 0.00 0.00 0.00 3.32
2151 5882 4.916870 AGGTAAACAACGTTCAAAGAAGC 58.083 39.130 0.00 0.00 0.00 3.86
2446 6180 3.531538 ACTGCATATTGGAAGGTACACG 58.468 45.455 0.00 0.00 0.00 4.49
2461 6197 2.597510 ACGCCTTTTCTGGTGGCC 60.598 61.111 0.00 0.00 43.42 5.36
2491 6227 7.862372 TGATTTTGTCAATGCTTTCTGTACTTC 59.138 33.333 0.00 0.00 32.78 3.01
2537 9374 1.795768 TCTCGCCACAACAAAGCTAG 58.204 50.000 0.00 0.00 0.00 3.42
2554 9391 2.224305 GCTAGCAACAGGGGTATGGTAG 60.224 54.545 10.63 6.81 44.12 3.18
2781 9828 4.046286 AGCAGGAGAGATGATAGTAGGG 57.954 50.000 0.00 0.00 0.00 3.53
2821 9868 6.017211 TCATGGATGAAATATCAACTGGGT 57.983 37.500 0.00 0.00 39.49 4.51
2913 9960 1.002544 CTGGTCTCACTCCTTCAACCC 59.997 57.143 0.00 0.00 0.00 4.11
2985 10032 3.724374 ACAAATCGTATACCATGGTCCG 58.276 45.455 23.76 21.30 0.00 4.79
3178 10242 3.091633 AGCCATGGTGCTTATTTCACT 57.908 42.857 14.67 0.00 38.85 3.41
3179 10243 3.434309 AGCCATGGTGCTTATTTCACTT 58.566 40.909 14.67 0.00 38.85 3.16
3180 10244 4.599041 AGCCATGGTGCTTATTTCACTTA 58.401 39.130 14.67 0.00 38.85 2.24
3182 10246 5.126061 AGCCATGGTGCTTATTTCACTTAAG 59.874 40.000 14.67 0.00 38.85 1.85
3183 10247 5.679638 GCCATGGTGCTTATTTCACTTAAGG 60.680 44.000 14.67 0.00 34.97 2.69
3184 10248 5.163519 CCATGGTGCTTATTTCACTTAAGGG 60.164 44.000 2.57 2.06 34.97 3.95
3207 10271 6.033966 GGTTAAGGAAAGCAAATCCAATACG 58.966 40.000 5.41 0.00 39.55 3.06
3239 10311 2.290960 GGACTTCACCTAAACATGCCCT 60.291 50.000 0.00 0.00 0.00 5.19
3247 10319 3.245586 ACCTAAACATGCCCTGATTTGGA 60.246 43.478 11.52 0.00 36.49 3.53
3275 10347 6.514541 GCGTGCCAGTGATAGACTTATTAGTA 60.515 42.308 0.00 0.00 33.84 1.82
3277 10349 8.082852 CGTGCCAGTGATAGACTTATTAGTATT 58.917 37.037 0.00 0.00 33.84 1.89
3278 10350 9.765795 GTGCCAGTGATAGACTTATTAGTATTT 57.234 33.333 0.00 0.00 33.84 1.40
3301 10373 9.833917 ATTTTTAGAGTAGTTATGCTAAGGGTC 57.166 33.333 0.00 0.00 0.00 4.46
3302 10374 8.605325 TTTTAGAGTAGTTATGCTAAGGGTCT 57.395 34.615 0.00 0.00 0.00 3.85
3303 10375 7.820578 TTAGAGTAGTTATGCTAAGGGTCTC 57.179 40.000 0.00 0.00 0.00 3.36
3304 10376 6.020881 AGAGTAGTTATGCTAAGGGTCTCT 57.979 41.667 0.00 0.00 0.00 3.10
3305 10377 6.436890 AGAGTAGTTATGCTAAGGGTCTCTT 58.563 40.000 0.00 0.00 39.40 2.85
3306 10378 6.898521 AGAGTAGTTATGCTAAGGGTCTCTTT 59.101 38.462 0.00 0.00 36.93 2.52
3307 10379 6.879400 AGTAGTTATGCTAAGGGTCTCTTTG 58.121 40.000 0.00 0.00 36.93 2.77
3308 10380 5.763876 AGTTATGCTAAGGGTCTCTTTGT 57.236 39.130 0.00 0.00 36.93 2.83
3309 10381 6.128138 AGTTATGCTAAGGGTCTCTTTGTT 57.872 37.500 0.00 0.00 36.93 2.83
3310 10382 6.543735 AGTTATGCTAAGGGTCTCTTTGTTT 58.456 36.000 0.00 0.00 36.93 2.83
3311 10383 6.655425 AGTTATGCTAAGGGTCTCTTTGTTTC 59.345 38.462 0.00 0.00 36.93 2.78
3312 10384 3.399330 TGCTAAGGGTCTCTTTGTTTCG 58.601 45.455 0.00 0.00 36.93 3.46
3313 10385 2.159824 GCTAAGGGTCTCTTTGTTTCGC 59.840 50.000 0.00 0.00 36.93 4.70
3314 10386 2.341846 AAGGGTCTCTTTGTTTCGCA 57.658 45.000 0.00 0.00 29.99 5.10
3315 10387 1.884235 AGGGTCTCTTTGTTTCGCAG 58.116 50.000 0.00 0.00 0.00 5.18
3316 10388 0.875059 GGGTCTCTTTGTTTCGCAGG 59.125 55.000 0.00 0.00 0.00 4.85
3317 10389 1.542547 GGGTCTCTTTGTTTCGCAGGA 60.543 52.381 0.00 0.00 0.00 3.86
3318 10390 2.427506 GGTCTCTTTGTTTCGCAGGAT 58.572 47.619 0.00 0.00 0.00 3.24
3319 10391 2.814336 GGTCTCTTTGTTTCGCAGGATT 59.186 45.455 0.00 0.00 0.00 3.01
3320 10392 3.120165 GGTCTCTTTGTTTCGCAGGATTC 60.120 47.826 0.00 0.00 0.00 2.52
3321 10393 3.748568 GTCTCTTTGTTTCGCAGGATTCT 59.251 43.478 0.00 0.00 0.00 2.40
3322 10394 4.929808 GTCTCTTTGTTTCGCAGGATTCTA 59.070 41.667 0.00 0.00 0.00 2.10
3323 10395 5.408604 GTCTCTTTGTTTCGCAGGATTCTAA 59.591 40.000 0.00 0.00 0.00 2.10
3324 10396 5.995282 TCTCTTTGTTTCGCAGGATTCTAAA 59.005 36.000 0.00 0.00 0.00 1.85
3325 10397 6.485313 TCTCTTTGTTTCGCAGGATTCTAAAA 59.515 34.615 0.00 0.00 0.00 1.52
3326 10398 7.012894 TCTCTTTGTTTCGCAGGATTCTAAAAA 59.987 33.333 0.00 0.00 0.00 1.94
3327 10399 6.915843 TCTTTGTTTCGCAGGATTCTAAAAAC 59.084 34.615 0.00 0.00 0.00 2.43
3328 10400 4.778904 TGTTTCGCAGGATTCTAAAAACG 58.221 39.130 0.00 0.00 0.00 3.60
3329 10401 4.273969 TGTTTCGCAGGATTCTAAAAACGT 59.726 37.500 0.00 0.00 0.00 3.99
3330 10402 5.466058 TGTTTCGCAGGATTCTAAAAACGTA 59.534 36.000 0.00 0.00 0.00 3.57
3331 10403 5.773239 TTCGCAGGATTCTAAAAACGTAG 57.227 39.130 0.00 0.00 0.00 3.51
3332 10404 4.178540 TCGCAGGATTCTAAAAACGTAGG 58.821 43.478 0.00 0.00 0.00 3.18
3333 10405 4.082081 TCGCAGGATTCTAAAAACGTAGGA 60.082 41.667 0.00 0.00 0.00 2.94
3334 10406 4.628333 CGCAGGATTCTAAAAACGTAGGAA 59.372 41.667 0.00 0.00 0.00 3.36
3335 10407 5.293569 CGCAGGATTCTAAAAACGTAGGAAT 59.706 40.000 0.00 0.00 0.00 3.01
3336 10408 6.477688 CGCAGGATTCTAAAAACGTAGGAATA 59.522 38.462 0.00 0.00 0.00 1.75
3337 10409 7.306632 CGCAGGATTCTAAAAACGTAGGAATAG 60.307 40.741 0.00 0.00 0.00 1.73
3338 10410 7.041984 GCAGGATTCTAAAAACGTAGGAATAGG 60.042 40.741 0.00 0.00 0.00 2.57
3398 10470 0.250727 ACATGGTCCAAACACCTCCG 60.251 55.000 0.00 0.00 37.34 4.63
3528 10603 6.542852 ACGTTTTCATCATTAAATCCGTCTG 58.457 36.000 0.00 0.00 0.00 3.51
3663 10742 8.332996 AGTTGCCATGATATGTTTCATCTATC 57.667 34.615 0.00 0.00 34.09 2.08
3721 10804 5.277825 TCAACTACTTTTCACGCCAAATTG 58.722 37.500 0.00 0.00 0.00 2.32
3776 10860 6.439675 AACCATGGCAAATTTAATTCATGC 57.560 33.333 13.04 8.42 36.31 4.06
4184 11303 5.636965 TGTAAACATGGCAATTTATGTGCAC 59.363 36.000 10.75 10.75 44.07 4.57
4191 11310 4.155826 TGGCAATTTATGTGCACTAGACAC 59.844 41.667 19.41 12.01 44.07 3.67
4204 11323 4.211374 GCACTAGACACGACAACTTTTGAT 59.789 41.667 0.00 0.00 0.00 2.57
4251 11372 6.752351 CGTATCGATATGGGATCTAGTTTTGG 59.248 42.308 15.63 0.00 0.00 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.031864 ACAACATCAATGTAAGTTTTGTCACAA 58.968 29.630 0.00 0.00 40.80 3.33
2 3 7.487829 ACACAACATCAATGTAAGTTTTGTCAC 59.512 33.333 0.00 0.00 40.80 3.67
4 5 7.700234 TCACACAACATCAATGTAAGTTTTGTC 59.300 33.333 0.00 0.00 40.80 3.18
5 6 7.542890 TCACACAACATCAATGTAAGTTTTGT 58.457 30.769 0.00 0.00 40.80 2.83
6 7 7.984002 TCACACAACATCAATGTAAGTTTTG 57.016 32.000 0.00 0.00 40.80 2.44
7 8 9.033481 CATTCACACAACATCAATGTAAGTTTT 57.967 29.630 0.00 0.00 40.80 2.43
8 9 8.196771 ACATTCACACAACATCAATGTAAGTTT 58.803 29.630 0.00 0.00 40.80 2.66
9 10 7.648908 CACATTCACACAACATCAATGTAAGTT 59.351 33.333 0.00 0.00 40.80 2.66
10 11 7.140705 CACATTCACACAACATCAATGTAAGT 58.859 34.615 0.00 0.00 40.80 2.24
11 12 6.088483 GCACATTCACACAACATCAATGTAAG 59.912 38.462 0.00 0.00 40.80 2.34
12 13 5.919707 GCACATTCACACAACATCAATGTAA 59.080 36.000 0.00 0.00 40.80 2.41
13 14 5.241285 AGCACATTCACACAACATCAATGTA 59.759 36.000 0.00 0.00 40.80 2.29
14 15 4.038282 AGCACATTCACACAACATCAATGT 59.962 37.500 0.00 0.00 44.20 2.71
15 16 4.552355 AGCACATTCACACAACATCAATG 58.448 39.130 0.00 0.00 0.00 2.82
16 17 4.859304 AGCACATTCACACAACATCAAT 57.141 36.364 0.00 0.00 0.00 2.57
17 18 5.764487 TTAGCACATTCACACAACATCAA 57.236 34.783 0.00 0.00 0.00 2.57
18 19 5.764487 TTTAGCACATTCACACAACATCA 57.236 34.783 0.00 0.00 0.00 3.07
19 20 8.915871 AATATTTAGCACATTCACACAACATC 57.084 30.769 0.00 0.00 0.00 3.06
20 21 9.709495 AAAATATTTAGCACATTCACACAACAT 57.291 25.926 0.01 0.00 0.00 2.71
21 22 9.539825 AAAAATATTTAGCACATTCACACAACA 57.460 25.926 0.01 0.00 0.00 3.33
23 24 9.755804 TGAAAAATATTTAGCACATTCACACAA 57.244 25.926 0.01 0.00 0.00 3.33
24 25 9.409312 CTGAAAAATATTTAGCACATTCACACA 57.591 29.630 0.01 0.00 0.00 3.72
25 26 8.863049 CCTGAAAAATATTTAGCACATTCACAC 58.137 33.333 0.01 0.00 0.00 3.82
26 27 8.801299 TCCTGAAAAATATTTAGCACATTCACA 58.199 29.630 0.01 0.00 0.00 3.58
27 28 9.807649 ATCCTGAAAAATATTTAGCACATTCAC 57.192 29.630 0.01 0.00 0.00 3.18
67 68 9.225436 TGCACTGAACTCATGTTATACAATTTA 57.775 29.630 0.00 0.00 36.39 1.40
68 69 8.023128 GTGCACTGAACTCATGTTATACAATTT 58.977 33.333 10.32 0.00 36.39 1.82
69 70 7.362056 GGTGCACTGAACTCATGTTATACAATT 60.362 37.037 17.98 0.00 36.39 2.32
70 71 6.094048 GGTGCACTGAACTCATGTTATACAAT 59.906 38.462 17.98 0.00 36.39 2.71
71 72 5.411361 GGTGCACTGAACTCATGTTATACAA 59.589 40.000 17.98 0.00 36.39 2.41
72 73 4.935205 GGTGCACTGAACTCATGTTATACA 59.065 41.667 17.98 0.00 36.39 2.29
73 74 4.032900 CGGTGCACTGAACTCATGTTATAC 59.967 45.833 21.59 0.00 36.39 1.47
74 75 4.180817 CGGTGCACTGAACTCATGTTATA 58.819 43.478 21.59 0.00 36.39 0.98
75 76 3.002791 CGGTGCACTGAACTCATGTTAT 58.997 45.455 21.59 0.00 36.39 1.89
76 77 2.412870 CGGTGCACTGAACTCATGTTA 58.587 47.619 21.59 0.00 36.39 2.41
77 78 1.229428 CGGTGCACTGAACTCATGTT 58.771 50.000 21.59 0.00 39.42 2.71
78 79 0.603707 CCGGTGCACTGAACTCATGT 60.604 55.000 27.46 0.00 0.00 3.21
79 80 1.915614 GCCGGTGCACTGAACTCATG 61.916 60.000 27.46 9.27 37.47 3.07
80 81 1.672356 GCCGGTGCACTGAACTCAT 60.672 57.895 27.46 0.00 37.47 2.90
81 82 2.280797 GCCGGTGCACTGAACTCA 60.281 61.111 27.46 0.00 37.47 3.41
82 83 2.280797 TGCCGGTGCACTGAACTC 60.281 61.111 27.46 12.74 44.23 3.01
83 84 2.281070 CTGCCGGTGCACTGAACT 60.281 61.111 27.46 0.00 44.23 3.01
84 85 4.030452 GCTGCCGGTGCACTGAAC 62.030 66.667 27.46 18.13 44.23 3.18
85 86 4.560743 TGCTGCCGGTGCACTGAA 62.561 61.111 27.46 13.50 44.23 3.02
106 107 4.400961 AGGCTCAAGCTCCGCCAC 62.401 66.667 19.23 0.00 46.14 5.01
107 108 4.399395 CAGGCTCAAGCTCCGCCA 62.399 66.667 19.23 0.00 46.14 5.69
108 109 2.317149 ATACAGGCTCAAGCTCCGCC 62.317 60.000 11.70 11.70 44.09 6.13
109 110 0.389391 TATACAGGCTCAAGCTCCGC 59.611 55.000 1.46 0.00 41.70 5.54
110 111 1.957177 TCTATACAGGCTCAAGCTCCG 59.043 52.381 1.46 0.00 41.70 4.63
111 112 3.226777 TCTCTATACAGGCTCAAGCTCC 58.773 50.000 1.46 0.00 41.70 4.70
112 113 4.927978 TTCTCTATACAGGCTCAAGCTC 57.072 45.455 1.46 0.00 41.70 4.09
113 114 5.669477 CTTTTCTCTATACAGGCTCAAGCT 58.331 41.667 1.46 0.00 41.70 3.74
114 115 4.272261 GCTTTTCTCTATACAGGCTCAAGC 59.728 45.833 0.00 0.00 41.14 4.01
115 116 5.293079 GTGCTTTTCTCTATACAGGCTCAAG 59.707 44.000 0.00 0.00 0.00 3.02
116 117 5.178797 GTGCTTTTCTCTATACAGGCTCAA 58.821 41.667 0.00 0.00 0.00 3.02
117 118 4.222810 TGTGCTTTTCTCTATACAGGCTCA 59.777 41.667 0.00 0.00 0.00 4.26
118 119 4.759782 TGTGCTTTTCTCTATACAGGCTC 58.240 43.478 0.00 0.00 0.00 4.70
119 120 4.223923 ACTGTGCTTTTCTCTATACAGGCT 59.776 41.667 0.00 0.00 39.71 4.58
120 121 4.508662 ACTGTGCTTTTCTCTATACAGGC 58.491 43.478 0.00 0.00 39.71 4.85
121 122 8.723942 AAATACTGTGCTTTTCTCTATACAGG 57.276 34.615 0.00 0.00 39.71 4.00
145 146 2.158475 ACACTGGCCCATGAGAGAAAAA 60.158 45.455 10.21 0.00 0.00 1.94
146 147 1.425066 ACACTGGCCCATGAGAGAAAA 59.575 47.619 10.21 0.00 0.00 2.29
147 148 1.067295 ACACTGGCCCATGAGAGAAA 58.933 50.000 10.21 0.00 0.00 2.52
148 149 0.325933 CACACTGGCCCATGAGAGAA 59.674 55.000 10.21 0.00 0.00 2.87
149 150 1.556373 CCACACTGGCCCATGAGAGA 61.556 60.000 10.21 0.00 0.00 3.10
150 151 1.077930 CCACACTGGCCCATGAGAG 60.078 63.158 10.21 0.00 0.00 3.20
151 152 1.841302 GACCACACTGGCCCATGAGA 61.841 60.000 10.21 0.00 42.67 3.27
152 153 1.377725 GACCACACTGGCCCATGAG 60.378 63.158 10.21 2.34 42.67 2.90
153 154 1.841302 GAGACCACACTGGCCCATGA 61.841 60.000 10.21 0.00 42.67 3.07
154 155 1.377725 GAGACCACACTGGCCCATG 60.378 63.158 0.00 0.00 42.67 3.66
155 156 1.426251 TTGAGACCACACTGGCCCAT 61.426 55.000 0.00 0.00 42.67 4.00
156 157 1.426251 ATTGAGACCACACTGGCCCA 61.426 55.000 0.00 0.00 42.67 5.36
157 158 0.251341 AATTGAGACCACACTGGCCC 60.251 55.000 0.00 0.00 42.67 5.80
158 159 0.883833 CAATTGAGACCACACTGGCC 59.116 55.000 0.00 0.00 42.67 5.36
159 160 1.609208 ACAATTGAGACCACACTGGC 58.391 50.000 13.59 0.00 42.67 4.85
160 161 4.821805 AGTTTACAATTGAGACCACACTGG 59.178 41.667 13.59 0.00 45.02 4.00
161 162 5.277974 CCAGTTTACAATTGAGACCACACTG 60.278 44.000 13.59 12.46 0.00 3.66
162 163 4.821805 CCAGTTTACAATTGAGACCACACT 59.178 41.667 13.59 1.39 0.00 3.55
163 164 4.023193 CCCAGTTTACAATTGAGACCACAC 60.023 45.833 13.59 0.00 0.00 3.82
164 165 4.141287 CCCAGTTTACAATTGAGACCACA 58.859 43.478 13.59 0.00 0.00 4.17
165 166 3.057526 GCCCAGTTTACAATTGAGACCAC 60.058 47.826 13.59 1.50 0.00 4.16
166 167 3.153919 GCCCAGTTTACAATTGAGACCA 58.846 45.455 13.59 0.00 0.00 4.02
167 168 2.161609 CGCCCAGTTTACAATTGAGACC 59.838 50.000 13.59 0.00 0.00 3.85
168 169 2.161609 CCGCCCAGTTTACAATTGAGAC 59.838 50.000 13.59 7.40 0.00 3.36
169 170 2.432444 CCGCCCAGTTTACAATTGAGA 58.568 47.619 13.59 0.00 0.00 3.27
170 171 1.472480 CCCGCCCAGTTTACAATTGAG 59.528 52.381 13.59 0.00 0.00 3.02
171 172 1.540267 CCCGCCCAGTTTACAATTGA 58.460 50.000 13.59 0.00 0.00 2.57
172 173 0.108851 GCCCGCCCAGTTTACAATTG 60.109 55.000 3.24 3.24 0.00 2.32
173 174 1.254975 GGCCCGCCCAGTTTACAATT 61.255 55.000 0.00 0.00 0.00 2.32
174 175 1.680989 GGCCCGCCCAGTTTACAAT 60.681 57.895 0.00 0.00 0.00 2.71
175 176 2.282603 GGCCCGCCCAGTTTACAA 60.283 61.111 0.00 0.00 0.00 2.41
176 177 3.571216 TGGCCCGCCCAGTTTACA 61.571 61.111 0.00 0.00 39.18 2.41
197 198 1.337167 GCTTAAGCAAGGCCAAACAGG 60.337 52.381 22.59 0.00 41.59 4.00
198 199 1.615392 AGCTTAAGCAAGGCCAAACAG 59.385 47.619 28.39 0.00 45.16 3.16
199 200 1.613437 GAGCTTAAGCAAGGCCAAACA 59.387 47.619 28.39 0.00 45.16 2.83
200 201 1.067565 GGAGCTTAAGCAAGGCCAAAC 60.068 52.381 28.39 8.23 45.16 2.93
201 202 1.256812 GGAGCTTAAGCAAGGCCAAA 58.743 50.000 28.39 0.00 45.16 3.28
202 203 0.960364 CGGAGCTTAAGCAAGGCCAA 60.960 55.000 28.39 0.00 45.16 4.52
203 204 1.377202 CGGAGCTTAAGCAAGGCCA 60.377 57.895 28.39 0.00 45.16 5.36
204 205 3.502572 CGGAGCTTAAGCAAGGCC 58.497 61.111 28.39 20.61 45.16 5.19
217 218 3.390521 TGCTACCCACTGGCGGAG 61.391 66.667 0.00 0.00 33.59 4.63
218 219 3.702048 GTGCTACCCACTGGCGGA 61.702 66.667 0.00 0.00 41.35 5.54
225 226 1.439679 GTGCTTGTAGTGCTACCCAC 58.560 55.000 6.87 7.65 45.01 4.61
226 227 0.323629 GGTGCTTGTAGTGCTACCCA 59.676 55.000 6.87 0.12 35.26 4.51
227 228 0.739813 CGGTGCTTGTAGTGCTACCC 60.740 60.000 6.87 0.48 35.26 3.69
228 229 0.739813 CCGGTGCTTGTAGTGCTACC 60.740 60.000 6.87 0.00 35.26 3.18
229 230 0.037605 ACCGGTGCTTGTAGTGCTAC 60.038 55.000 6.12 2.60 36.63 3.58
230 231 0.037697 CACCGGTGCTTGTAGTGCTA 60.038 55.000 24.02 0.00 0.00 3.49
231 232 1.301716 CACCGGTGCTTGTAGTGCT 60.302 57.895 24.02 0.00 0.00 4.40
232 233 3.253955 CACCGGTGCTTGTAGTGC 58.746 61.111 24.02 0.00 0.00 4.40
242 243 1.134401 AGAATATCTGGTGCACCGGTG 60.134 52.381 37.57 30.66 43.01 4.94
243 244 1.139058 GAGAATATCTGGTGCACCGGT 59.861 52.381 37.57 27.76 43.01 5.28
244 245 1.541233 GGAGAATATCTGGTGCACCGG 60.541 57.143 35.06 35.06 43.86 5.28
245 246 1.869754 CGGAGAATATCTGGTGCACCG 60.870 57.143 30.07 23.48 39.43 4.94
246 247 1.871080 CGGAGAATATCTGGTGCACC 58.129 55.000 29.67 29.67 0.00 5.01
247 248 1.202580 AGCGGAGAATATCTGGTGCAC 60.203 52.381 8.80 8.80 43.46 4.57
248 249 1.069204 GAGCGGAGAATATCTGGTGCA 59.931 52.381 0.00 0.00 45.11 4.57
249 250 1.606737 GGAGCGGAGAATATCTGGTGC 60.607 57.143 0.00 0.00 45.11 5.01
250 251 1.688735 TGGAGCGGAGAATATCTGGTG 59.311 52.381 0.00 0.00 45.11 4.17
252 253 2.416566 CGATGGAGCGGAGAATATCTGG 60.417 54.545 0.00 0.00 34.56 3.86
253 254 2.873609 CGATGGAGCGGAGAATATCTG 58.126 52.381 0.00 0.00 37.36 2.90
254 255 1.203523 GCGATGGAGCGGAGAATATCT 59.796 52.381 0.00 0.00 0.00 1.98
255 256 1.634702 GCGATGGAGCGGAGAATATC 58.365 55.000 0.00 0.00 0.00 1.63
256 257 0.247736 GGCGATGGAGCGGAGAATAT 59.752 55.000 0.00 0.00 38.18 1.28
257 258 0.827925 AGGCGATGGAGCGGAGAATA 60.828 55.000 0.00 0.00 38.18 1.75
258 259 2.136878 AGGCGATGGAGCGGAGAAT 61.137 57.895 0.00 0.00 38.18 2.40
259 260 2.759973 AGGCGATGGAGCGGAGAA 60.760 61.111 0.00 0.00 38.18 2.87
260 261 3.531207 CAGGCGATGGAGCGGAGA 61.531 66.667 0.00 0.00 38.18 3.71
261 262 3.781770 GACAGGCGATGGAGCGGAG 62.782 68.421 0.00 0.00 38.18 4.63
262 263 3.838271 GACAGGCGATGGAGCGGA 61.838 66.667 0.00 0.00 38.18 5.54
263 264 4.899239 GGACAGGCGATGGAGCGG 62.899 72.222 0.00 0.00 38.18 5.52
264 265 3.781770 GAGGACAGGCGATGGAGCG 62.782 68.421 0.00 0.00 38.18 5.03
265 266 2.107953 GAGGACAGGCGATGGAGC 59.892 66.667 0.00 0.00 0.00 4.70
266 267 1.949847 AACGAGGACAGGCGATGGAG 61.950 60.000 0.00 0.00 0.00 3.86
267 268 1.541310 AAACGAGGACAGGCGATGGA 61.541 55.000 0.00 0.00 0.00 3.41
268 269 1.079127 AAACGAGGACAGGCGATGG 60.079 57.895 0.00 0.00 0.00 3.51
269 270 1.361668 CCAAACGAGGACAGGCGATG 61.362 60.000 0.00 0.00 0.00 3.84
270 271 1.079127 CCAAACGAGGACAGGCGAT 60.079 57.895 0.00 0.00 0.00 4.58
271 272 1.541310 ATCCAAACGAGGACAGGCGA 61.541 55.000 0.00 0.00 41.30 5.54
272 273 1.079127 ATCCAAACGAGGACAGGCG 60.079 57.895 0.00 0.00 41.30 5.52
273 274 0.250513 AGATCCAAACGAGGACAGGC 59.749 55.000 0.00 0.00 41.30 4.85
274 275 2.482142 GCTAGATCCAAACGAGGACAGG 60.482 54.545 0.00 0.00 41.30 4.00
275 276 2.482142 GGCTAGATCCAAACGAGGACAG 60.482 54.545 0.00 0.00 41.30 3.51
276 277 1.480954 GGCTAGATCCAAACGAGGACA 59.519 52.381 0.00 0.00 41.30 4.02
277 278 1.480954 TGGCTAGATCCAAACGAGGAC 59.519 52.381 0.00 0.00 41.30 3.85
278 279 1.480954 GTGGCTAGATCCAAACGAGGA 59.519 52.381 0.00 0.00 43.01 3.71
279 280 1.802880 CGTGGCTAGATCCAAACGAGG 60.803 57.143 0.00 0.00 37.96 4.63
280 281 1.560923 CGTGGCTAGATCCAAACGAG 58.439 55.000 0.00 0.00 37.96 4.18
281 282 0.174845 CCGTGGCTAGATCCAAACGA 59.825 55.000 0.00 0.00 37.96 3.85
282 283 1.429148 GCCGTGGCTAGATCCAAACG 61.429 60.000 2.98 0.00 37.96 3.60
283 284 1.429148 CGCCGTGGCTAGATCCAAAC 61.429 60.000 9.55 0.00 37.96 2.93
284 285 1.153449 CGCCGTGGCTAGATCCAAA 60.153 57.895 9.55 0.00 37.96 3.28
285 286 2.499205 CGCCGTGGCTAGATCCAA 59.501 61.111 9.55 0.00 37.96 3.53
286 287 3.536917 CCGCCGTGGCTAGATCCA 61.537 66.667 9.55 0.00 39.32 3.41
287 288 2.973180 GAACCGCCGTGGCTAGATCC 62.973 65.000 9.55 0.00 43.94 3.36
288 289 1.591863 GAACCGCCGTGGCTAGATC 60.592 63.158 9.55 1.14 43.94 2.75
289 290 2.298158 CTGAACCGCCGTGGCTAGAT 62.298 60.000 9.55 0.00 43.94 1.98
290 291 2.992689 TGAACCGCCGTGGCTAGA 60.993 61.111 9.55 0.00 43.94 2.43
291 292 2.509336 CTGAACCGCCGTGGCTAG 60.509 66.667 9.55 2.78 43.94 3.42
292 293 1.534336 TAACTGAACCGCCGTGGCTA 61.534 55.000 9.55 0.00 43.94 3.93
293 294 2.781595 CTAACTGAACCGCCGTGGCT 62.782 60.000 9.55 0.00 43.94 4.75
294 295 2.357760 TAACTGAACCGCCGTGGC 60.358 61.111 0.00 0.00 43.94 5.01
295 296 2.388232 GCTAACTGAACCGCCGTGG 61.388 63.158 0.00 0.00 46.41 4.94
296 297 0.949105 AAGCTAACTGAACCGCCGTG 60.949 55.000 0.00 0.00 0.00 4.94
297 298 0.250166 AAAGCTAACTGAACCGCCGT 60.250 50.000 0.00 0.00 0.00 5.68
298 299 0.872388 AAAAGCTAACTGAACCGCCG 59.128 50.000 0.00 0.00 0.00 6.46
299 300 1.607148 ACAAAAGCTAACTGAACCGCC 59.393 47.619 0.00 0.00 0.00 6.13
300 301 4.477302 TTACAAAAGCTAACTGAACCGC 57.523 40.909 0.00 0.00 0.00 5.68
301 302 6.970613 AGTTTTTACAAAAGCTAACTGAACCG 59.029 34.615 2.41 0.00 37.62 4.44
302 303 9.447040 CTAGTTTTTACAAAAGCTAACTGAACC 57.553 33.333 10.81 0.00 39.89 3.62
303 304 9.999009 ACTAGTTTTTACAAAAGCTAACTGAAC 57.001 29.630 10.81 0.00 39.89 3.18
305 306 9.386010 TGACTAGTTTTTACAAAAGCTAACTGA 57.614 29.630 10.81 0.00 39.89 3.41
306 307 9.651718 CTGACTAGTTTTTACAAAAGCTAACTG 57.348 33.333 10.81 8.69 39.89 3.16
307 308 8.343366 GCTGACTAGTTTTTACAAAAGCTAACT 58.657 33.333 10.81 0.00 39.89 2.24
308 309 7.590322 GGCTGACTAGTTTTTACAAAAGCTAAC 59.410 37.037 10.81 8.97 39.89 2.34
309 310 7.519328 CGGCTGACTAGTTTTTACAAAAGCTAA 60.519 37.037 10.81 0.00 39.89 3.09
310 311 6.073440 CGGCTGACTAGTTTTTACAAAAGCTA 60.073 38.462 0.00 9.66 39.61 3.32
311 312 5.277828 CGGCTGACTAGTTTTTACAAAAGCT 60.278 40.000 0.00 8.54 41.39 3.74
312 313 4.909880 CGGCTGACTAGTTTTTACAAAAGC 59.090 41.667 0.00 0.00 0.00 3.51
313 314 4.909880 GCGGCTGACTAGTTTTTACAAAAG 59.090 41.667 0.00 0.00 0.00 2.27
314 315 4.335874 TGCGGCTGACTAGTTTTTACAAAA 59.664 37.500 0.00 0.00 0.00 2.44
315 316 3.878103 TGCGGCTGACTAGTTTTTACAAA 59.122 39.130 0.00 0.00 0.00 2.83
316 317 3.468770 TGCGGCTGACTAGTTTTTACAA 58.531 40.909 0.00 0.00 0.00 2.41
317 318 3.114668 TGCGGCTGACTAGTTTTTACA 57.885 42.857 0.00 0.00 0.00 2.41
318 319 4.477302 TTTGCGGCTGACTAGTTTTTAC 57.523 40.909 0.00 0.00 0.00 2.01
319 320 4.261280 GGTTTTGCGGCTGACTAGTTTTTA 60.261 41.667 0.00 0.00 0.00 1.52
320 321 3.490249 GGTTTTGCGGCTGACTAGTTTTT 60.490 43.478 0.00 0.00 0.00 1.94
321 322 2.034179 GGTTTTGCGGCTGACTAGTTTT 59.966 45.455 0.00 0.00 0.00 2.43
322 323 1.607148 GGTTTTGCGGCTGACTAGTTT 59.393 47.619 0.00 0.00 0.00 2.66
323 324 1.235724 GGTTTTGCGGCTGACTAGTT 58.764 50.000 0.00 0.00 0.00 2.24
324 325 0.107831 TGGTTTTGCGGCTGACTAGT 59.892 50.000 0.00 0.00 0.00 2.57
325 326 0.798776 CTGGTTTTGCGGCTGACTAG 59.201 55.000 0.00 1.03 0.00 2.57
326 327 0.394938 TCTGGTTTTGCGGCTGACTA 59.605 50.000 0.00 0.00 0.00 2.59
327 328 0.465460 TTCTGGTTTTGCGGCTGACT 60.465 50.000 0.00 0.00 0.00 3.41
328 329 0.383949 TTTCTGGTTTTGCGGCTGAC 59.616 50.000 0.00 0.00 0.00 3.51
329 330 1.107114 TTTTCTGGTTTTGCGGCTGA 58.893 45.000 0.00 0.00 0.00 4.26
330 331 1.933247 TTTTTCTGGTTTTGCGGCTG 58.067 45.000 0.00 0.00 0.00 4.85
347 348 1.901464 ATGTCACGCCGGCCTTTTT 60.901 52.632 23.46 0.00 0.00 1.94
348 349 2.282180 ATGTCACGCCGGCCTTTT 60.282 55.556 23.46 0.00 0.00 2.27
349 350 3.055719 CATGTCACGCCGGCCTTT 61.056 61.111 23.46 1.55 0.00 3.11
359 360 1.265095 CCTGTTGACTGTGCATGTCAC 59.735 52.381 20.25 16.17 43.13 3.67
360 361 1.596603 CCTGTTGACTGTGCATGTCA 58.403 50.000 17.70 17.70 41.94 3.58
361 362 0.877071 CCCTGTTGACTGTGCATGTC 59.123 55.000 13.66 13.66 35.21 3.06
362 363 0.473755 TCCCTGTTGACTGTGCATGT 59.526 50.000 0.00 0.00 0.00 3.21
363 364 1.608055 TTCCCTGTTGACTGTGCATG 58.392 50.000 0.00 0.00 0.00 4.06
364 365 2.363306 TTTCCCTGTTGACTGTGCAT 57.637 45.000 0.00 0.00 0.00 3.96
365 366 2.361757 CAATTTCCCTGTTGACTGTGCA 59.638 45.455 0.00 0.00 0.00 4.57
366 367 2.622942 TCAATTTCCCTGTTGACTGTGC 59.377 45.455 0.00 0.00 29.93 4.57
367 368 5.458041 AATCAATTTCCCTGTTGACTGTG 57.542 39.130 0.00 0.00 37.19 3.66
368 369 4.216257 CGAATCAATTTCCCTGTTGACTGT 59.784 41.667 0.00 0.00 37.19 3.55
369 370 4.726416 CGAATCAATTTCCCTGTTGACTG 58.274 43.478 0.00 0.00 37.19 3.51
370 371 3.191371 GCGAATCAATTTCCCTGTTGACT 59.809 43.478 0.00 0.00 37.19 3.41
371 372 3.057596 TGCGAATCAATTTCCCTGTTGAC 60.058 43.478 0.00 0.00 37.19 3.18
372 373 3.153130 TGCGAATCAATTTCCCTGTTGA 58.847 40.909 0.00 0.00 38.57 3.18
373 374 3.574284 TGCGAATCAATTTCCCTGTTG 57.426 42.857 0.00 0.00 0.00 3.33
374 375 4.599047 TTTGCGAATCAATTTCCCTGTT 57.401 36.364 0.00 0.00 34.12 3.16
375 376 4.599047 TTTTGCGAATCAATTTCCCTGT 57.401 36.364 0.00 0.00 34.12 4.00
396 397 6.806668 TTCTCCCAATTTCCTGTTCTTTTT 57.193 33.333 0.00 0.00 0.00 1.94
397 398 6.806668 TTTCTCCCAATTTCCTGTTCTTTT 57.193 33.333 0.00 0.00 0.00 2.27
398 399 6.806668 TTTTCTCCCAATTTCCTGTTCTTT 57.193 33.333 0.00 0.00 0.00 2.52
399 400 7.379059 AATTTTCTCCCAATTTCCTGTTCTT 57.621 32.000 0.00 0.00 0.00 2.52
400 401 8.491045 TTAATTTTCTCCCAATTTCCTGTTCT 57.509 30.769 0.00 0.00 0.00 3.01
401 402 9.554395 TTTTAATTTTCTCCCAATTTCCTGTTC 57.446 29.630 0.00 0.00 0.00 3.18
403 404 9.506018 CATTTTAATTTTCTCCCAATTTCCTGT 57.494 29.630 0.00 0.00 0.00 4.00
404 405 8.949177 CCATTTTAATTTTCTCCCAATTTCCTG 58.051 33.333 0.00 0.00 0.00 3.86
405 406 8.108999 CCCATTTTAATTTTCTCCCAATTTCCT 58.891 33.333 0.00 0.00 0.00 3.36
406 407 7.339212 CCCCATTTTAATTTTCTCCCAATTTCC 59.661 37.037 0.00 0.00 0.00 3.13
407 408 7.888021 ACCCCATTTTAATTTTCTCCCAATTTC 59.112 33.333 0.00 0.00 0.00 2.17
408 409 7.764617 ACCCCATTTTAATTTTCTCCCAATTT 58.235 30.769 0.00 0.00 0.00 1.82
409 410 7.341885 ACCCCATTTTAATTTTCTCCCAATT 57.658 32.000 0.00 0.00 0.00 2.32
410 411 6.968400 ACCCCATTTTAATTTTCTCCCAAT 57.032 33.333 0.00 0.00 0.00 3.16
411 412 7.873699 TTACCCCATTTTAATTTTCTCCCAA 57.126 32.000 0.00 0.00 0.00 4.12
412 413 7.873699 TTTACCCCATTTTAATTTTCTCCCA 57.126 32.000 0.00 0.00 0.00 4.37
413 414 9.173021 CATTTTACCCCATTTTAATTTTCTCCC 57.827 33.333 0.00 0.00 0.00 4.30
414 415 9.733556 ACATTTTACCCCATTTTAATTTTCTCC 57.266 29.630 0.00 0.00 0.00 3.71
416 417 9.513906 CCACATTTTACCCCATTTTAATTTTCT 57.486 29.630 0.00 0.00 0.00 2.52
417 418 8.240682 GCCACATTTTACCCCATTTTAATTTTC 58.759 33.333 0.00 0.00 0.00 2.29
418 419 7.725844 TGCCACATTTTACCCCATTTTAATTTT 59.274 29.630 0.00 0.00 0.00 1.82
419 420 7.175816 GTGCCACATTTTACCCCATTTTAATTT 59.824 33.333 0.00 0.00 0.00 1.82
420 421 6.657117 GTGCCACATTTTACCCCATTTTAATT 59.343 34.615 0.00 0.00 0.00 1.40
421 422 6.176896 GTGCCACATTTTACCCCATTTTAAT 58.823 36.000 0.00 0.00 0.00 1.40
422 423 5.071788 TGTGCCACATTTTACCCCATTTTAA 59.928 36.000 0.00 0.00 0.00 1.52
423 424 4.593206 TGTGCCACATTTTACCCCATTTTA 59.407 37.500 0.00 0.00 0.00 1.52
424 425 3.392616 TGTGCCACATTTTACCCCATTTT 59.607 39.130 0.00 0.00 0.00 1.82
425 426 2.975489 TGTGCCACATTTTACCCCATTT 59.025 40.909 0.00 0.00 0.00 2.32
426 427 2.614259 TGTGCCACATTTTACCCCATT 58.386 42.857 0.00 0.00 0.00 3.16
427 428 2.317371 TGTGCCACATTTTACCCCAT 57.683 45.000 0.00 0.00 0.00 4.00
428 429 2.317371 ATGTGCCACATTTTACCCCA 57.683 45.000 4.03 0.00 34.67 4.96
429 430 5.115480 CAAATATGTGCCACATTTTACCCC 58.885 41.667 16.67 0.00 39.88 4.95
430 431 4.570369 GCAAATATGTGCCACATTTTACCC 59.430 41.667 16.67 3.25 39.88 3.69
431 432 5.717038 GCAAATATGTGCCACATTTTACC 57.283 39.130 16.67 5.53 39.88 2.85
460 461 9.856488 GTGACAGACATTCTCAGTTTATACTAA 57.144 33.333 0.00 0.00 31.96 2.24
461 462 8.182227 CGTGACAGACATTCTCAGTTTATACTA 58.818 37.037 0.00 0.00 31.96 1.82
462 463 7.030165 CGTGACAGACATTCTCAGTTTATACT 58.970 38.462 0.00 0.00 34.00 2.12
463 464 6.237595 GCGTGACAGACATTCTCAGTTTATAC 60.238 42.308 0.00 0.00 0.00 1.47
464 465 5.805486 GCGTGACAGACATTCTCAGTTTATA 59.195 40.000 0.00 0.00 0.00 0.98
465 466 4.627467 GCGTGACAGACATTCTCAGTTTAT 59.373 41.667 0.00 0.00 0.00 1.40
466 467 3.987868 GCGTGACAGACATTCTCAGTTTA 59.012 43.478 0.00 0.00 0.00 2.01
467 468 2.802816 GCGTGACAGACATTCTCAGTTT 59.197 45.455 0.00 0.00 0.00 2.66
468 469 2.408050 GCGTGACAGACATTCTCAGTT 58.592 47.619 0.00 0.00 0.00 3.16
469 470 1.667177 CGCGTGACAGACATTCTCAGT 60.667 52.381 0.00 0.00 0.00 3.41
470 471 0.987715 CGCGTGACAGACATTCTCAG 59.012 55.000 0.00 0.00 0.00 3.35
471 472 0.313987 ACGCGTGACAGACATTCTCA 59.686 50.000 12.93 0.00 0.00 3.27
472 473 0.710567 CACGCGTGACAGACATTCTC 59.289 55.000 34.93 0.00 0.00 2.87
473 474 0.313987 TCACGCGTGACAGACATTCT 59.686 50.000 36.40 0.00 34.14 2.40
474 475 1.136690 TTCACGCGTGACAGACATTC 58.863 50.000 39.38 0.00 39.66 2.67
478 479 2.092211 CCTAATTTCACGCGTGACAGAC 59.908 50.000 39.38 0.00 39.66 3.51
534 535 4.433615 TCGATTTGCCAGTACTTCATCTC 58.566 43.478 0.00 0.00 0.00 2.75
540 541 3.418684 AGGTTCGATTTGCCAGTACTT 57.581 42.857 0.00 0.00 0.00 2.24
549 550 2.307049 GCACGTCAAAGGTTCGATTTG 58.693 47.619 4.00 4.00 38.68 2.32
553 554 0.806884 AACGCACGTCAAAGGTTCGA 60.807 50.000 0.00 0.00 0.00 3.71
565 566 2.497304 AGTAATTACGCAAACGCACG 57.503 45.000 9.91 0.00 45.53 5.34
566 567 4.310675 TGTAGTAATTACGCAAACGCAC 57.689 40.909 9.91 1.29 45.53 5.34
567 568 4.210746 TGTTGTAGTAATTACGCAAACGCA 59.789 37.500 21.54 15.75 45.53 5.24
571 572 7.656948 ACCTTAGTGTTGTAGTAATTACGCAAA 59.343 33.333 21.54 11.08 34.87 3.68
580 581 5.532406 ACGTCAGACCTTAGTGTTGTAGTAA 59.468 40.000 0.00 0.00 0.00 2.24
581 582 5.065914 ACGTCAGACCTTAGTGTTGTAGTA 58.934 41.667 0.00 0.00 0.00 1.82
588 589 2.035576 GTCCAACGTCAGACCTTAGTGT 59.964 50.000 6.65 0.00 0.00 3.55
598 599 2.754472 TCATCTGTTGTCCAACGTCAG 58.246 47.619 5.75 0.00 43.94 3.51
602 603 8.818141 AATATAGTATCATCTGTTGTCCAACG 57.182 34.615 5.75 1.68 43.94 4.10
626 627 6.173191 GGTACGTCTAGCATTTTTGCTAAA 57.827 37.500 8.83 0.00 45.46 1.85
645 646 2.756840 AGACCTGTAAAAGCCGGTAC 57.243 50.000 1.90 0.00 0.00 3.34
646 647 3.775261 AAAGACCTGTAAAAGCCGGTA 57.225 42.857 1.90 0.00 0.00 4.02
647 648 2.651382 AAAGACCTGTAAAAGCCGGT 57.349 45.000 1.90 0.00 0.00 5.28
648 649 3.404899 TGTAAAGACCTGTAAAAGCCGG 58.595 45.455 0.00 0.00 0.00 6.13
649 650 3.435671 CCTGTAAAGACCTGTAAAAGCCG 59.564 47.826 0.00 0.00 0.00 5.52
650 651 3.190744 GCCTGTAAAGACCTGTAAAAGCC 59.809 47.826 0.00 0.00 0.00 4.35
651 652 4.072839 AGCCTGTAAAGACCTGTAAAAGC 58.927 43.478 0.00 0.00 0.00 3.51
652 653 4.695928 GGAGCCTGTAAAGACCTGTAAAAG 59.304 45.833 0.00 0.00 0.00 2.27
653 654 4.349930 AGGAGCCTGTAAAGACCTGTAAAA 59.650 41.667 0.00 0.00 0.00 1.52
654 655 3.908103 AGGAGCCTGTAAAGACCTGTAAA 59.092 43.478 0.00 0.00 0.00 2.01
655 656 3.517612 AGGAGCCTGTAAAGACCTGTAA 58.482 45.455 0.00 0.00 0.00 2.41
656 657 3.185880 AGGAGCCTGTAAAGACCTGTA 57.814 47.619 0.00 0.00 0.00 2.74
657 658 2.031495 AGGAGCCTGTAAAGACCTGT 57.969 50.000 0.00 0.00 0.00 4.00
658 659 2.355209 GGAAGGAGCCTGTAAAGACCTG 60.355 54.545 0.00 0.00 0.00 4.00
659 660 1.909986 GGAAGGAGCCTGTAAAGACCT 59.090 52.381 0.00 0.00 0.00 3.85
660 661 1.628846 TGGAAGGAGCCTGTAAAGACC 59.371 52.381 0.00 0.00 0.00 3.85
661 662 3.418684 TTGGAAGGAGCCTGTAAAGAC 57.581 47.619 0.00 0.00 0.00 3.01
662 663 3.394606 AGTTTGGAAGGAGCCTGTAAAGA 59.605 43.478 0.00 0.00 0.00 2.52
663 664 3.756117 AGTTTGGAAGGAGCCTGTAAAG 58.244 45.455 0.00 0.00 0.00 1.85
664 665 3.876309 AGTTTGGAAGGAGCCTGTAAA 57.124 42.857 0.00 0.00 0.00 2.01
665 666 3.876309 AAGTTTGGAAGGAGCCTGTAA 57.124 42.857 0.00 0.00 0.00 2.41
666 667 3.394606 AGAAAGTTTGGAAGGAGCCTGTA 59.605 43.478 0.00 0.00 0.00 2.74
667 668 2.175715 AGAAAGTTTGGAAGGAGCCTGT 59.824 45.455 0.00 0.00 0.00 4.00
668 669 2.868899 AGAAAGTTTGGAAGGAGCCTG 58.131 47.619 0.00 0.00 0.00 4.85
669 670 4.724279 TTAGAAAGTTTGGAAGGAGCCT 57.276 40.909 0.00 0.00 0.00 4.58
670 671 4.583073 TGTTTAGAAAGTTTGGAAGGAGCC 59.417 41.667 0.00 0.00 0.00 4.70
671 672 5.067283 TGTGTTTAGAAAGTTTGGAAGGAGC 59.933 40.000 0.00 0.00 0.00 4.70
672 673 6.459710 GGTGTGTTTAGAAAGTTTGGAAGGAG 60.460 42.308 0.00 0.00 0.00 3.69
673 674 5.358725 GGTGTGTTTAGAAAGTTTGGAAGGA 59.641 40.000 0.00 0.00 0.00 3.36
674 675 5.451381 GGGTGTGTTTAGAAAGTTTGGAAGG 60.451 44.000 0.00 0.00 0.00 3.46
675 676 5.451381 GGGGTGTGTTTAGAAAGTTTGGAAG 60.451 44.000 0.00 0.00 0.00 3.46
676 677 4.403113 GGGGTGTGTTTAGAAAGTTTGGAA 59.597 41.667 0.00 0.00 0.00 3.53
677 678 3.955551 GGGGTGTGTTTAGAAAGTTTGGA 59.044 43.478 0.00 0.00 0.00 3.53
678 679 3.069016 GGGGGTGTGTTTAGAAAGTTTGG 59.931 47.826 0.00 0.00 0.00 3.28
679 680 4.316205 GGGGGTGTGTTTAGAAAGTTTG 57.684 45.455 0.00 0.00 0.00 2.93
698 699 4.337013 CCCGTTGAAATCAGGGGG 57.663 61.111 11.74 9.21 40.18 5.40
700 701 0.965363 CACCCCCGTTGAAATCAGGG 60.965 60.000 4.39 4.39 43.41 4.45
701 702 0.965363 CCACCCCCGTTGAAATCAGG 60.965 60.000 0.00 0.00 0.00 3.86
702 703 0.965363 CCCACCCCCGTTGAAATCAG 60.965 60.000 0.00 0.00 0.00 2.90
703 704 1.075836 CCCACCCCCGTTGAAATCA 59.924 57.895 0.00 0.00 0.00 2.57
704 705 1.680989 CCCCACCCCCGTTGAAATC 60.681 63.158 0.00 0.00 0.00 2.17
705 706 2.443324 CCCCACCCCCGTTGAAAT 59.557 61.111 0.00 0.00 0.00 2.17
706 707 4.607025 GCCCCACCCCCGTTGAAA 62.607 66.667 0.00 0.00 0.00 2.69
722 723 1.538419 GGTCATTAGTAGAGGCACGGC 60.538 57.143 0.00 0.00 0.00 5.68
723 724 1.754803 TGGTCATTAGTAGAGGCACGG 59.245 52.381 0.00 0.00 0.00 4.94
724 725 3.520290 TTGGTCATTAGTAGAGGCACG 57.480 47.619 0.00 0.00 0.00 5.34
725 726 7.859325 TTTAATTGGTCATTAGTAGAGGCAC 57.141 36.000 0.00 0.00 0.00 5.01
726 727 8.736244 GTTTTTAATTGGTCATTAGTAGAGGCA 58.264 33.333 0.00 0.00 0.00 4.75
727 728 8.188799 GGTTTTTAATTGGTCATTAGTAGAGGC 58.811 37.037 0.00 0.00 0.00 4.70
728 729 8.395633 CGGTTTTTAATTGGTCATTAGTAGAGG 58.604 37.037 0.00 0.00 0.00 3.69
729 730 7.908601 GCGGTTTTTAATTGGTCATTAGTAGAG 59.091 37.037 0.00 0.00 0.00 2.43
730 731 7.148205 GGCGGTTTTTAATTGGTCATTAGTAGA 60.148 37.037 0.00 0.00 0.00 2.59
731 732 6.970613 GGCGGTTTTTAATTGGTCATTAGTAG 59.029 38.462 0.00 0.00 0.00 2.57
732 733 6.433404 TGGCGGTTTTTAATTGGTCATTAGTA 59.567 34.615 0.00 0.00 0.00 1.82
733 734 5.244178 TGGCGGTTTTTAATTGGTCATTAGT 59.756 36.000 0.00 0.00 0.00 2.24
734 735 5.575218 GTGGCGGTTTTTAATTGGTCATTAG 59.425 40.000 0.00 0.00 0.00 1.73
735 736 5.010719 TGTGGCGGTTTTTAATTGGTCATTA 59.989 36.000 0.00 0.00 0.00 1.90
736 737 4.202264 TGTGGCGGTTTTTAATTGGTCATT 60.202 37.500 0.00 0.00 0.00 2.57
737 738 3.322254 TGTGGCGGTTTTTAATTGGTCAT 59.678 39.130 0.00 0.00 0.00 3.06
738 739 2.693591 TGTGGCGGTTTTTAATTGGTCA 59.306 40.909 0.00 0.00 0.00 4.02
739 740 3.372660 TGTGGCGGTTTTTAATTGGTC 57.627 42.857 0.00 0.00 0.00 4.02
740 741 3.118738 TGTTGTGGCGGTTTTTAATTGGT 60.119 39.130 0.00 0.00 0.00 3.67
741 742 3.246463 GTGTTGTGGCGGTTTTTAATTGG 59.754 43.478 0.00 0.00 0.00 3.16
742 743 3.246463 GGTGTTGTGGCGGTTTTTAATTG 59.754 43.478 0.00 0.00 0.00 2.32
743 744 3.459145 GGTGTTGTGGCGGTTTTTAATT 58.541 40.909 0.00 0.00 0.00 1.40
744 745 2.224090 GGGTGTTGTGGCGGTTTTTAAT 60.224 45.455 0.00 0.00 0.00 1.40
745 746 1.136500 GGGTGTTGTGGCGGTTTTTAA 59.864 47.619 0.00 0.00 0.00 1.52
746 747 0.745468 GGGTGTTGTGGCGGTTTTTA 59.255 50.000 0.00 0.00 0.00 1.52
747 748 0.973496 AGGGTGTTGTGGCGGTTTTT 60.973 50.000 0.00 0.00 0.00 1.94
748 749 1.380650 AGGGTGTTGTGGCGGTTTT 60.381 52.632 0.00 0.00 0.00 2.43
749 750 2.124693 CAGGGTGTTGTGGCGGTTT 61.125 57.895 0.00 0.00 0.00 3.27
750 751 1.985460 TACAGGGTGTTGTGGCGGTT 61.985 55.000 0.00 0.00 32.56 4.44
751 752 1.985460 TTACAGGGTGTTGTGGCGGT 61.985 55.000 0.00 0.00 32.56 5.68
752 753 0.820074 TTTACAGGGTGTTGTGGCGG 60.820 55.000 0.00 0.00 32.56 6.13
753 754 0.309612 GTTTACAGGGTGTTGTGGCG 59.690 55.000 0.00 0.00 32.56 5.69
754 755 0.671796 GGTTTACAGGGTGTTGTGGC 59.328 55.000 0.00 0.00 32.56 5.01
755 756 1.324383 GGGTTTACAGGGTGTTGTGG 58.676 55.000 0.00 0.00 32.56 4.17
756 757 1.133606 AGGGGTTTACAGGGTGTTGTG 60.134 52.381 0.00 0.00 32.56 3.33
757 758 1.144298 GAGGGGTTTACAGGGTGTTGT 59.856 52.381 0.00 0.00 35.09 3.32
758 759 1.144093 TGAGGGGTTTACAGGGTGTTG 59.856 52.381 0.00 0.00 0.00 3.33
759 760 1.525175 TGAGGGGTTTACAGGGTGTT 58.475 50.000 0.00 0.00 0.00 3.32
760 761 1.633945 GATGAGGGGTTTACAGGGTGT 59.366 52.381 0.00 0.00 0.00 4.16
761 762 1.064685 GGATGAGGGGTTTACAGGGTG 60.065 57.143 0.00 0.00 0.00 4.61
762 763 1.296002 GGATGAGGGGTTTACAGGGT 58.704 55.000 0.00 0.00 0.00 4.34
763 764 0.551396 GGGATGAGGGGTTTACAGGG 59.449 60.000 0.00 0.00 0.00 4.45
764 765 1.212935 CAGGGATGAGGGGTTTACAGG 59.787 57.143 0.00 0.00 0.00 4.00
765 766 1.916181 ACAGGGATGAGGGGTTTACAG 59.084 52.381 0.00 0.00 0.00 2.74
766 767 2.053747 ACAGGGATGAGGGGTTTACA 57.946 50.000 0.00 0.00 0.00 2.41
767 768 3.371273 GGTTACAGGGATGAGGGGTTTAC 60.371 52.174 0.00 0.00 0.00 2.01
768 769 2.848071 GGTTACAGGGATGAGGGGTTTA 59.152 50.000 0.00 0.00 0.00 2.01
769 770 1.639108 GGTTACAGGGATGAGGGGTTT 59.361 52.381 0.00 0.00 0.00 3.27
770 771 1.203570 AGGTTACAGGGATGAGGGGTT 60.204 52.381 0.00 0.00 0.00 4.11
771 772 0.421904 AGGTTACAGGGATGAGGGGT 59.578 55.000 0.00 0.00 0.00 4.95
772 773 1.132500 GAGGTTACAGGGATGAGGGG 58.868 60.000 0.00 0.00 0.00 4.79
773 774 1.132500 GGAGGTTACAGGGATGAGGG 58.868 60.000 0.00 0.00 0.00 4.30
774 775 1.765314 CAGGAGGTTACAGGGATGAGG 59.235 57.143 0.00 0.00 0.00 3.86
775 776 2.472029 ACAGGAGGTTACAGGGATGAG 58.528 52.381 0.00 0.00 0.00 2.90
776 777 2.642171 ACAGGAGGTTACAGGGATGA 57.358 50.000 0.00 0.00 0.00 2.92
777 778 2.100916 CGTACAGGAGGTTACAGGGATG 59.899 54.545 0.00 0.00 0.00 3.51
778 779 2.292061 ACGTACAGGAGGTTACAGGGAT 60.292 50.000 0.00 0.00 0.00 3.85
779 780 1.076024 ACGTACAGGAGGTTACAGGGA 59.924 52.381 0.00 0.00 0.00 4.20
780 781 1.203994 CACGTACAGGAGGTTACAGGG 59.796 57.143 0.00 0.00 0.00 4.45
781 782 1.891150 ACACGTACAGGAGGTTACAGG 59.109 52.381 0.00 0.00 0.00 4.00
782 783 3.427233 GCTACACGTACAGGAGGTTACAG 60.427 52.174 0.00 0.00 0.00 2.74
783 784 2.489329 GCTACACGTACAGGAGGTTACA 59.511 50.000 0.00 0.00 0.00 2.41
784 785 2.489329 TGCTACACGTACAGGAGGTTAC 59.511 50.000 0.00 0.00 0.00 2.50
785 786 2.794103 TGCTACACGTACAGGAGGTTA 58.206 47.619 0.00 0.00 0.00 2.85
786 787 1.624336 TGCTACACGTACAGGAGGTT 58.376 50.000 0.00 0.00 0.00 3.50
787 788 1.624336 TTGCTACACGTACAGGAGGT 58.376 50.000 0.00 0.00 0.00 3.85
788 789 2.607187 CTTTGCTACACGTACAGGAGG 58.393 52.381 0.00 0.00 0.00 4.30
789 790 1.993370 GCTTTGCTACACGTACAGGAG 59.007 52.381 0.00 0.00 0.00 3.69
790 791 1.616865 AGCTTTGCTACACGTACAGGA 59.383 47.619 0.00 0.00 36.99 3.86
791 792 1.993370 GAGCTTTGCTACACGTACAGG 59.007 52.381 0.00 0.00 39.88 4.00
792 793 1.993370 GGAGCTTTGCTACACGTACAG 59.007 52.381 0.00 0.00 39.71 2.74
793 794 1.616865 AGGAGCTTTGCTACACGTACA 59.383 47.619 4.51 0.00 42.99 2.90
794 795 2.365408 AGGAGCTTTGCTACACGTAC 57.635 50.000 4.51 0.00 42.99 3.67
795 796 6.401047 AATATAGGAGCTTTGCTACACGTA 57.599 37.500 4.51 0.00 42.99 3.57
796 797 4.939052 ATATAGGAGCTTTGCTACACGT 57.061 40.909 4.51 0.00 42.99 4.49
797 798 7.339732 CTAAATATAGGAGCTTTGCTACACG 57.660 40.000 4.51 0.00 42.99 4.49
820 821 9.461312 TTGAATGTAAATACTCAAAGTATGCCT 57.539 29.630 0.58 0.00 40.32 4.75
892 897 2.040544 CGCATTTCTCGCCAACCCT 61.041 57.895 0.00 0.00 0.00 4.34
898 903 2.598632 CGGATCCGCATTTCTCGCC 61.599 63.158 23.37 0.00 0.00 5.54
907 912 2.971997 CGAGAAATTCGGATCCGCA 58.028 52.632 29.62 20.38 45.54 5.69
929 940 1.393539 CGATGCGAGTGGTAGGTTTTG 59.606 52.381 0.00 0.00 0.00 2.44
946 957 3.876300 GAGCAAACAGGTCGCGAT 58.124 55.556 14.06 0.00 34.67 4.58
1072 1095 1.323271 TAGCAGGAGGAAGCTCACCG 61.323 60.000 0.00 0.00 42.05 4.94
1096 1165 3.510388 ATGTCGATCAGTACACAGGTG 57.490 47.619 0.00 0.00 0.00 4.00
1099 1168 3.131223 AGGGAATGTCGATCAGTACACAG 59.869 47.826 0.00 0.00 0.00 3.66
1103 1172 4.657436 AAGAGGGAATGTCGATCAGTAC 57.343 45.455 0.00 0.00 0.00 2.73
1104 1173 4.099573 GGAAAGAGGGAATGTCGATCAGTA 59.900 45.833 0.00 0.00 0.00 2.74
1105 1174 3.118592 GGAAAGAGGGAATGTCGATCAGT 60.119 47.826 0.00 0.00 0.00 3.41
1123 1198 4.883585 GCATACTGATGATGTGGAAGGAAA 59.116 41.667 0.00 0.00 34.73 3.13
1132 1207 7.628769 TGTTACATTTGCATACTGATGATGT 57.371 32.000 0.00 0.00 34.28 3.06
1152 1249 4.379708 GCATGTGCACACAGATTGATGTTA 60.380 41.667 24.37 0.00 45.48 2.41
1340 1521 4.713553 TCTGTGTGCAATTTCAGACCTAA 58.286 39.130 3.07 0.00 32.95 2.69
1416 4920 0.394216 TGCACCCACACATCCATAGC 60.394 55.000 0.00 0.00 0.00 2.97
1453 4966 2.413112 CAGCTTGACACCATTGTAGTCG 59.587 50.000 0.00 0.00 35.47 4.18
1582 5099 1.483595 TACCTGCTCTGCTGCCAACT 61.484 55.000 0.00 0.00 0.00 3.16
1633 5230 2.171003 GTTGCCTGCTGTCCCTAAAAT 58.829 47.619 0.00 0.00 0.00 1.82
1691 5294 9.201127 GGGTAATTAGTATTTCCTACGATCAAC 57.799 37.037 0.00 0.00 35.35 3.18
1718 5321 8.135382 AGAGCACTTGGTTTAGTAGATAGAAA 57.865 34.615 0.00 0.00 0.00 2.52
1892 5612 2.951229 TCAGAGAAAGGGGTTCCAAC 57.049 50.000 0.00 0.00 36.86 3.77
2102 5833 7.611467 TCATAATGTAGTCTGTTTGGATGCTTT 59.389 33.333 0.00 0.00 0.00 3.51
2109 5840 8.786826 TTACCTTCATAATGTAGTCTGTTTGG 57.213 34.615 0.00 0.00 0.00 3.28
2139 5870 4.549458 ACCAATGAATGCTTCTTTGAACG 58.451 39.130 17.90 9.60 43.56 3.95
2151 5882 0.527113 TGCGCTGGAACCAATGAATG 59.473 50.000 9.73 0.00 0.00 2.67
2396 6130 6.419413 GGAATTTTAGTCAACGAATTGCACAA 59.581 34.615 0.00 0.00 35.63 3.33
2491 6227 9.935241 AACTCATACTAGCTCATGGTAATAATG 57.065 33.333 0.00 0.00 0.00 1.90
2515 6896 1.065551 AGCTTTGTTGTGGCGAGAAAC 59.934 47.619 0.00 0.00 0.00 2.78
2537 9374 1.134189 GGTCTACCATACCCCTGTTGC 60.134 57.143 0.00 0.00 35.64 4.17
2554 9391 6.801539 TCATCACAACAGAAGTTTATGGTC 57.198 37.500 0.00 0.00 35.28 4.02
2563 9400 4.556942 TGTGCTTTCATCACAACAGAAG 57.443 40.909 0.00 0.00 41.01 2.85
2781 9828 0.523072 TGAAGAGCGCTTTTGATGGC 59.477 50.000 18.99 3.64 33.61 4.40
2821 9868 2.370849 GGAAGGTGGTAGAACTGTCCAA 59.629 50.000 0.00 0.00 32.82 3.53
2913 9960 1.000955 AGTTGGTAAGTCTCTGGTGCG 59.999 52.381 0.00 0.00 0.00 5.34
2985 10032 6.434018 AAGAAACTCATAATGCAGCTCTTC 57.566 37.500 0.00 0.00 0.00 2.87
3178 10242 6.078664 TGGATTTGCTTTCCTTAACCCTTAA 58.921 36.000 2.58 0.00 34.17 1.85
3179 10243 5.646215 TGGATTTGCTTTCCTTAACCCTTA 58.354 37.500 2.58 0.00 34.17 2.69
3180 10244 4.488770 TGGATTTGCTTTCCTTAACCCTT 58.511 39.130 2.58 0.00 34.17 3.95
3182 10246 4.882842 TTGGATTTGCTTTCCTTAACCC 57.117 40.909 2.58 0.00 34.17 4.11
3183 10247 6.033966 CGTATTGGATTTGCTTTCCTTAACC 58.966 40.000 2.58 0.00 34.17 2.85
3184 10248 5.515270 GCGTATTGGATTTGCTTTCCTTAAC 59.485 40.000 2.58 0.00 34.17 2.01
3207 10271 1.168714 GTGAAGTCCAGGTTCCATGC 58.831 55.000 0.00 0.00 0.00 4.06
3239 10311 1.303970 TGGCACGCCATCCAAATCA 60.304 52.632 6.67 0.00 41.89 2.57
3247 10319 0.179073 GTCTATCACTGGCACGCCAT 60.179 55.000 11.97 0.00 46.15 4.40
3275 10347 9.833917 GACCCTTAGCATAACTACTCTAAAAAT 57.166 33.333 0.00 0.00 0.00 1.82
3277 10349 8.605325 AGACCCTTAGCATAACTACTCTAAAA 57.395 34.615 0.00 0.00 0.00 1.52
3278 10350 8.060075 AGAGACCCTTAGCATAACTACTCTAAA 58.940 37.037 0.00 0.00 31.12 1.85
3279 10351 7.584532 AGAGACCCTTAGCATAACTACTCTAA 58.415 38.462 0.00 0.00 31.12 2.10
3280 10352 7.151694 AGAGACCCTTAGCATAACTACTCTA 57.848 40.000 0.00 0.00 31.12 2.43
3297 10369 0.875059 CCTGCGAAACAAAGAGACCC 59.125 55.000 0.00 0.00 0.00 4.46
3298 10370 1.878953 TCCTGCGAAACAAAGAGACC 58.121 50.000 0.00 0.00 0.00 3.85
3299 10371 3.748568 AGAATCCTGCGAAACAAAGAGAC 59.251 43.478 0.00 0.00 0.00 3.36
3300 10372 4.008074 AGAATCCTGCGAAACAAAGAGA 57.992 40.909 0.00 0.00 0.00 3.10
3301 10373 5.862924 TTAGAATCCTGCGAAACAAAGAG 57.137 39.130 0.00 0.00 0.00 2.85
3302 10374 6.627395 TTTTAGAATCCTGCGAAACAAAGA 57.373 33.333 0.00 0.00 0.00 2.52
3303 10375 6.129457 CGTTTTTAGAATCCTGCGAAACAAAG 60.129 38.462 0.00 0.00 0.00 2.77
3304 10376 5.683743 CGTTTTTAGAATCCTGCGAAACAAA 59.316 36.000 0.00 0.00 0.00 2.83
3305 10377 5.209240 CGTTTTTAGAATCCTGCGAAACAA 58.791 37.500 0.00 0.00 0.00 2.83
3306 10378 4.273969 ACGTTTTTAGAATCCTGCGAAACA 59.726 37.500 0.00 0.00 0.00 2.83
3307 10379 4.779987 ACGTTTTTAGAATCCTGCGAAAC 58.220 39.130 0.00 0.00 0.00 2.78
3308 10380 5.121142 CCTACGTTTTTAGAATCCTGCGAAA 59.879 40.000 0.00 0.00 0.00 3.46
3309 10381 4.628333 CCTACGTTTTTAGAATCCTGCGAA 59.372 41.667 0.00 0.00 0.00 4.70
3310 10382 4.082081 TCCTACGTTTTTAGAATCCTGCGA 60.082 41.667 0.00 0.00 0.00 5.10
3311 10383 4.178540 TCCTACGTTTTTAGAATCCTGCG 58.821 43.478 0.00 0.00 0.00 5.18
3312 10384 6.679327 ATTCCTACGTTTTTAGAATCCTGC 57.321 37.500 0.00 0.00 0.00 4.85
3313 10385 8.202137 TCCTATTCCTACGTTTTTAGAATCCTG 58.798 37.037 0.00 0.00 0.00 3.86
3314 10386 8.315220 TCCTATTCCTACGTTTTTAGAATCCT 57.685 34.615 0.00 0.00 0.00 3.24
3315 10387 8.953368 TTCCTATTCCTACGTTTTTAGAATCC 57.047 34.615 0.00 0.00 0.00 3.01
3318 10390 9.002600 GGTTTTCCTATTCCTACGTTTTTAGAA 57.997 33.333 0.00 0.00 36.94 2.10
3319 10391 7.607607 GGGTTTTCCTATTCCTACGTTTTTAGA 59.392 37.037 0.00 0.00 40.46 2.10
3320 10392 7.391275 TGGGTTTTCCTATTCCTACGTTTTTAG 59.609 37.037 0.00 0.00 40.46 1.85
3321 10393 7.230027 TGGGTTTTCCTATTCCTACGTTTTTA 58.770 34.615 0.00 0.00 40.46 1.52
3322 10394 6.069994 TGGGTTTTCCTATTCCTACGTTTTT 58.930 36.000 0.00 0.00 40.46 1.94
3323 10395 5.633117 TGGGTTTTCCTATTCCTACGTTTT 58.367 37.500 0.00 0.00 40.46 2.43
3324 10396 5.245584 TGGGTTTTCCTATTCCTACGTTT 57.754 39.130 0.00 0.00 40.46 3.60
3325 10397 4.914177 TGGGTTTTCCTATTCCTACGTT 57.086 40.909 0.00 0.00 40.46 3.99
3326 10398 4.914177 TTGGGTTTTCCTATTCCTACGT 57.086 40.909 0.00 0.00 40.46 3.57
3327 10399 5.883673 TCATTTGGGTTTTCCTATTCCTACG 59.116 40.000 0.00 0.00 40.46 3.51
3328 10400 7.898014 ATCATTTGGGTTTTCCTATTCCTAC 57.102 36.000 0.00 0.00 40.46 3.18
3329 10401 9.640952 CTTATCATTTGGGTTTTCCTATTCCTA 57.359 33.333 0.00 0.00 40.46 2.94
3330 10402 8.122481 ACTTATCATTTGGGTTTTCCTATTCCT 58.878 33.333 0.00 0.00 40.46 3.36
3331 10403 8.197439 CACTTATCATTTGGGTTTTCCTATTCC 58.803 37.037 0.00 0.00 40.46 3.01
3332 10404 8.749354 ACACTTATCATTTGGGTTTTCCTATTC 58.251 33.333 0.00 0.00 40.46 1.75
3333 10405 8.664669 ACACTTATCATTTGGGTTTTCCTATT 57.335 30.769 0.00 0.00 40.46 1.73
3334 10406 7.893302 TGACACTTATCATTTGGGTTTTCCTAT 59.107 33.333 0.00 0.00 40.46 2.57
3335 10407 7.175990 GTGACACTTATCATTTGGGTTTTCCTA 59.824 37.037 0.00 0.00 40.46 2.94
3336 10408 6.015434 GTGACACTTATCATTTGGGTTTTCCT 60.015 38.462 0.00 0.00 40.46 3.36
3337 10409 6.156519 GTGACACTTATCATTTGGGTTTTCC 58.843 40.000 0.00 0.00 39.75 3.13
3338 10410 6.744112 TGTGACACTTATCATTTGGGTTTTC 58.256 36.000 7.20 0.00 0.00 2.29
3398 10470 6.449635 TGATGTAGCAAAATGGATGGTAAC 57.550 37.500 0.00 0.00 33.05 2.50
3528 10603 4.516365 TCTAGTTTTGAAGGTCTCGTCC 57.484 45.455 0.00 0.00 0.00 4.79
3787 10871 8.458573 AAATTGCCATGATGCATGAATTAAAT 57.541 26.923 2.46 0.00 43.81 1.40
3791 10875 7.051623 ACTAAAATTGCCATGATGCATGAATT 58.948 30.769 2.46 5.41 43.81 2.17
3795 10879 6.671614 AAACTAAAATTGCCATGATGCATG 57.328 33.333 2.46 0.00 41.70 4.06
3798 10884 9.918630 ATCTATAAACTAAAATTGCCATGATGC 57.081 29.630 0.00 0.00 0.00 3.91
3938 11047 3.244976 GACTCAAATTTGCCATGAACCG 58.755 45.455 13.54 0.00 0.00 4.44
4136 11252 3.302675 CGAAGTTGCCATGATATGTGTCG 60.303 47.826 0.00 0.00 0.00 4.35
4139 11255 2.945008 ACCGAAGTTGCCATGATATGTG 59.055 45.455 0.00 0.00 0.00 3.21
4184 11303 5.107453 GGTGATCAAAAGTTGTCGTGTCTAG 60.107 44.000 0.00 0.00 0.00 2.43
4225 11345 5.502153 AACTAGATCCCATATCGATACGC 57.498 43.478 7.41 0.00 0.00 4.42
4227 11347 7.837863 TCCAAAACTAGATCCCATATCGATAC 58.162 38.462 7.41 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.