Multiple sequence alignment - TraesCS5A01G153900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G153900 chr5A 100.000 5035 0 0 1 5035 331398779 331403813 0.000000e+00 9299.0
1 TraesCS5A01G153900 chr5A 99.225 129 1 0 200 328 642505178 642505306 3.030000e-57 233.0
2 TraesCS5A01G153900 chr5D 97.127 3133 77 6 1908 5035 247611416 247614540 0.000000e+00 5275.0
3 TraesCS5A01G153900 chr5D 94.889 1174 39 12 706 1878 247610263 247611416 0.000000e+00 1816.0
4 TraesCS5A01G153900 chr5D 95.122 246 11 1 325 569 340919061 340919306 2.200000e-103 387.0
5 TraesCS5A01G153900 chr5D 87.374 198 11 3 1 198 247609805 247609988 1.100000e-51 215.0
6 TraesCS5A01G153900 chr5B 96.808 3133 72 12 1908 5035 281837837 281840946 0.000000e+00 5206.0
7 TraesCS5A01G153900 chr5B 93.667 1279 56 12 602 1878 281836582 281837837 0.000000e+00 1890.0
8 TraesCS5A01G153900 chr5B 95.455 198 8 1 1 198 281836370 281836566 1.050000e-81 315.0
9 TraesCS5A01G153900 chr3D 76.804 901 148 42 2273 3122 37776609 37777499 2.760000e-122 449.0
10 TraesCS5A01G153900 chr3D 93.701 254 13 3 325 577 235737992 235737741 1.320000e-100 377.0
11 TraesCS5A01G153900 chr3D 81.402 371 48 16 3583 3947 37777978 37778333 2.970000e-72 283.0
12 TraesCS5A01G153900 chr3A 76.772 917 143 54 2260 3122 47849893 47850793 2.760000e-122 449.0
13 TraesCS5A01G153900 chr3A 93.939 264 13 3 325 586 674275006 674275268 3.650000e-106 396.0
14 TraesCS5A01G153900 chr3A 83.385 325 40 9 245 565 22046525 22046211 6.380000e-74 289.0
15 TraesCS5A01G153900 chr7D 94.444 252 12 2 320 569 437360932 437360681 2.200000e-103 387.0
16 TraesCS5A01G153900 chr7D 94.048 252 13 2 320 569 529298184 529298435 1.020000e-101 381.0
17 TraesCS5A01G153900 chr4D 95.122 246 11 1 325 569 120788653 120788898 2.200000e-103 387.0
18 TraesCS5A01G153900 chr4D 93.333 255 16 1 325 578 208004710 208004456 4.760000e-100 375.0
19 TraesCS5A01G153900 chr4D 93.525 139 9 0 190 328 23352734 23352596 1.840000e-49 207.0
20 TraesCS5A01G153900 chr4A 94.048 252 13 2 320 569 144889392 144889141 1.020000e-101 381.0
21 TraesCS5A01G153900 chr1A 93.676 253 14 2 319 569 325414313 325414565 1.320000e-100 377.0
22 TraesCS5A01G153900 chr7A 91.506 259 20 2 313 569 37622784 37622526 6.200000e-94 355.0
23 TraesCS5A01G153900 chr7A 86.765 68 8 1 315 382 703803522 703803456 1.940000e-09 75.0
24 TraesCS5A01G153900 chr7A 86.364 66 8 1 315 380 703752055 703751991 2.510000e-08 71.3
25 TraesCS5A01G153900 chr6A 88.933 253 27 1 313 565 319782744 319782493 1.360000e-80 311.0
26 TraesCS5A01G153900 chr6A 96.923 130 4 0 197 326 133757562 133757433 8.490000e-53 219.0
27 TraesCS5A01G153900 chr2B 86.364 264 33 2 305 565 793913900 793913637 8.250000e-73 285.0
28 TraesCS5A01G153900 chr2B 97.692 130 3 0 200 329 667413376 667413247 1.820000e-54 224.0
29 TraesCS5A01G153900 chr2B 84.211 76 11 1 304 379 19880074 19880148 6.990000e-09 73.1
30 TraesCS5A01G153900 chr3B 99.219 128 1 0 199 326 167260415 167260288 1.090000e-56 231.0
31 TraesCS5A01G153900 chr7B 97.744 133 2 1 199 330 374557840 374557972 1.410000e-55 228.0
32 TraesCS5A01G153900 chr1B 96.212 132 5 0 198 329 409879937 409879806 3.050000e-52 217.0
33 TraesCS5A01G153900 chr1B 94.776 134 7 0 193 326 364117332 364117465 5.110000e-50 209.0
34 TraesCS5A01G153900 chr4B 86.782 174 16 6 155 326 665346015 665345847 2.390000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G153900 chr5A 331398779 331403813 5034 False 9299.000000 9299 100.000 1 5035 1 chr5A.!!$F1 5034
1 TraesCS5A01G153900 chr5D 247609805 247614540 4735 False 2435.333333 5275 93.130 1 5035 3 chr5D.!!$F2 5034
2 TraesCS5A01G153900 chr5B 281836370 281840946 4576 False 2470.333333 5206 95.310 1 5035 3 chr5B.!!$F1 5034
3 TraesCS5A01G153900 chr3D 37776609 37778333 1724 False 366.000000 449 79.103 2273 3947 2 chr3D.!!$F1 1674
4 TraesCS5A01G153900 chr3A 47849893 47850793 900 False 449.000000 449 76.772 2260 3122 1 chr3A.!!$F1 862

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 332 0.033306 GGACGGAGGGAGTACTTCCT 60.033 60.0 23.71 23.71 45.98 3.36 F
1794 1960 0.522180 TCTCCTTCGTCTTGCTCGAC 59.478 55.0 0.00 0.00 37.05 4.20 F
2545 2728 0.107459 GGTCACCTGATCTGAAGGCC 60.107 60.0 0.00 0.00 38.48 5.19 F
3966 4209 0.106819 GCATCTCCCAGCAACCATCT 60.107 55.0 0.00 0.00 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1911 2077 0.034670 AAGATTGTCTGAGGGCAGGC 60.035 55.00 0.0 0.0 46.90 4.85 R
3784 4027 0.040958 GTTCTGGCACAAGAGCAACG 60.041 55.00 0.0 0.0 38.70 4.10 R
3969 4212 0.538287 GGCTTCTTGCTGGTTCCTGT 60.538 55.00 0.0 0.0 42.39 4.00 R
4924 5171 5.151632 TGAACTTTTGCAACTTCGTCTAC 57.848 39.13 0.0 0.0 0.00 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 88 1.202604 ACTCGTACCAATAATGCCGGG 60.203 52.381 2.18 0.00 0.00 5.73
122 123 1.952990 GTCCTCCCTACTACGTAAGCC 59.047 57.143 0.00 0.00 45.62 4.35
164 165 1.414158 TCAAGGAGATCCGGATCACC 58.586 55.000 39.17 39.17 45.29 4.02
169 170 0.249489 GAGATCCGGATCACCCAACG 60.249 60.000 38.83 0.00 40.22 4.10
182 183 1.002134 CCAACGAGATGCACCCCTT 60.002 57.895 0.00 0.00 0.00 3.95
190 191 3.733337 GAGATGCACCCCTTACATACAG 58.267 50.000 0.00 0.00 0.00 2.74
194 195 5.606749 AGATGCACCCCTTACATACAGATAA 59.393 40.000 0.00 0.00 0.00 1.75
198 199 5.527582 GCACCCCTTACATACAGATAACAAG 59.472 44.000 0.00 0.00 0.00 3.16
201 202 7.709613 CACCCCTTACATACAGATAACAAGTAC 59.290 40.741 0.00 0.00 0.00 2.73
202 203 7.622479 ACCCCTTACATACAGATAACAAGTACT 59.378 37.037 0.00 0.00 0.00 2.73
203 204 8.142551 CCCCTTACATACAGATAACAAGTACTC 58.857 40.741 0.00 0.00 0.00 2.59
204 205 8.142551 CCCTTACATACAGATAACAAGTACTCC 58.857 40.741 0.00 0.00 0.00 3.85
205 206 8.142551 CCTTACATACAGATAACAAGTACTCCC 58.857 40.741 0.00 0.00 0.00 4.30
207 208 7.349412 ACATACAGATAACAAGTACTCCCTC 57.651 40.000 0.00 0.00 0.00 4.30
209 210 3.700038 ACAGATAACAAGTACTCCCTCCG 59.300 47.826 0.00 0.00 0.00 4.63
210 211 3.700038 CAGATAACAAGTACTCCCTCCGT 59.300 47.826 0.00 0.00 0.00 4.69
212 213 1.264295 AACAAGTACTCCCTCCGTCC 58.736 55.000 0.00 0.00 0.00 4.79
213 214 0.964358 ACAAGTACTCCCTCCGTCCG 60.964 60.000 0.00 0.00 0.00 4.79
214 215 0.679002 CAAGTACTCCCTCCGTCCGA 60.679 60.000 0.00 0.00 0.00 4.55
215 216 0.038744 AAGTACTCCCTCCGTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
216 217 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
217 218 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
218 219 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
219 220 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
220 221 1.755380 ACTCCCTCCGTCCGAAAATAG 59.245 52.381 0.00 0.00 0.00 1.73
221 222 1.755380 CTCCCTCCGTCCGAAAATAGT 59.245 52.381 0.00 0.00 0.00 2.12
222 223 2.167900 CTCCCTCCGTCCGAAAATAGTT 59.832 50.000 0.00 0.00 0.00 2.24
223 224 2.093869 TCCCTCCGTCCGAAAATAGTTG 60.094 50.000 0.00 0.00 0.00 3.16
224 225 2.354403 CCCTCCGTCCGAAAATAGTTGT 60.354 50.000 0.00 0.00 0.00 3.32
225 226 2.928116 CCTCCGTCCGAAAATAGTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
226 227 3.581755 CTCCGTCCGAAAATAGTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
227 228 4.181578 CTCCGTCCGAAAATAGTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
228 229 4.178540 TCCGTCCGAAAATAGTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
229 230 3.930229 CCGTCCGAAAATAGTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
230 231 4.390603 CCGTCCGAAAATAGTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
231 232 5.106869 CCGTCCGAAAATAGTTGTCATCAAA 60.107 40.000 0.00 0.00 35.20 2.69
232 233 6.367421 CGTCCGAAAATAGTTGTCATCAAAA 58.633 36.000 0.00 0.00 35.20 2.44
233 234 6.853872 CGTCCGAAAATAGTTGTCATCAAAAA 59.146 34.615 0.00 0.00 35.20 1.94
234 235 7.059488 CGTCCGAAAATAGTTGTCATCAAAAAG 59.941 37.037 0.00 0.00 35.20 2.27
235 236 8.073768 GTCCGAAAATAGTTGTCATCAAAAAGA 58.926 33.333 0.00 0.00 35.20 2.52
236 237 8.625651 TCCGAAAATAGTTGTCATCAAAAAGAA 58.374 29.630 0.00 0.00 35.20 2.52
237 238 9.410556 CCGAAAATAGTTGTCATCAAAAAGAAT 57.589 29.630 0.00 0.00 35.20 2.40
245 246 8.923270 AGTTGTCATCAAAAAGAATAAAAGGGA 58.077 29.630 0.00 0.00 35.20 4.20
246 247 9.541143 GTTGTCATCAAAAAGAATAAAAGGGAA 57.459 29.630 0.00 0.00 35.20 3.97
248 249 9.709495 TGTCATCAAAAAGAATAAAAGGGAATG 57.291 29.630 0.00 0.00 0.00 2.67
249 250 9.710900 GTCATCAAAAAGAATAAAAGGGAATGT 57.289 29.630 0.00 0.00 0.00 2.71
291 292 9.206690 AGTTCTAGATACATCTCTTTTCATCCA 57.793 33.333 0.00 0.00 38.32 3.41
292 293 9.995003 GTTCTAGATACATCTCTTTTCATCCAT 57.005 33.333 0.00 0.00 38.32 3.41
297 298 9.690913 AGATACATCTCTTTTCATCCATTTTGA 57.309 29.630 0.00 0.00 29.30 2.69
311 312 9.859427 TCATCCATTTTGATGACAACTATTTTC 57.141 29.630 0.00 0.00 44.65 2.29
312 313 8.800972 CATCCATTTTGATGACAACTATTTTCG 58.199 33.333 0.00 0.00 43.94 3.46
313 314 7.312154 TCCATTTTGATGACAACTATTTTCGG 58.688 34.615 0.00 0.00 35.63 4.30
314 315 7.175816 TCCATTTTGATGACAACTATTTTCGGA 59.824 33.333 0.00 0.00 35.63 4.55
315 316 7.273381 CCATTTTGATGACAACTATTTTCGGAC 59.727 37.037 0.00 0.00 35.63 4.79
316 317 5.524511 TTGATGACAACTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
317 318 3.930229 TGATGACAACTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
318 319 3.663995 TGACAACTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
319 320 3.581755 TGACAACTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
320 321 2.928116 GACAACTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
321 322 2.277084 CAACTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
322 323 1.856629 ACTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
323 324 1.755380 ACTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
324 325 1.755380 CTATTTTCGGACGGAGGGAGT 59.245 52.381 0.00 0.00 0.00 3.85
325 326 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
326 327 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
327 328 0.038744 TTTCGGACGGAGGGAGTACT 59.961 55.000 0.00 0.00 0.00 2.73
328 329 0.038744 TTCGGACGGAGGGAGTACTT 59.961 55.000 0.00 0.00 0.00 2.24
329 330 0.393537 TCGGACGGAGGGAGTACTTC 60.394 60.000 0.00 0.00 0.00 3.01
330 331 1.382692 CGGACGGAGGGAGTACTTCC 61.383 65.000 12.91 12.91 46.00 3.46
331 332 0.033306 GGACGGAGGGAGTACTTCCT 60.033 60.000 23.71 23.71 45.98 3.36
332 333 1.391577 GACGGAGGGAGTACTTCCTC 58.608 60.000 34.53 34.53 45.98 3.71
337 338 2.390696 GAGGGAGTACTTCCTCCTTCC 58.609 57.143 32.98 13.70 46.67 3.46
338 339 2.292323 GAGGGAGTACTTCCTCCTTCCA 60.292 54.545 32.98 0.00 46.67 3.53
339 340 3.631346 GAGGGAGTACTTCCTCCTTCCAT 60.631 52.174 32.98 9.51 46.67 3.41
340 341 5.478912 GAGGGAGTACTTCCTCCTTCCATC 61.479 54.167 32.98 14.33 46.67 3.51
341 342 3.648739 GGAGTACTTCCTCCTTCCATCT 58.351 50.000 0.00 0.00 46.34 2.90
342 343 4.805744 GGAGTACTTCCTCCTTCCATCTA 58.194 47.826 0.00 0.00 46.34 1.98
343 344 5.399113 GGAGTACTTCCTCCTTCCATCTAT 58.601 45.833 0.00 0.00 46.34 1.98
344 345 6.553857 GGAGTACTTCCTCCTTCCATCTATA 58.446 44.000 0.00 0.00 46.34 1.31
345 346 7.186268 GGAGTACTTCCTCCTTCCATCTATAT 58.814 42.308 0.00 0.00 46.34 0.86
346 347 8.337739 GGAGTACTTCCTCCTTCCATCTATATA 58.662 40.741 0.00 0.00 46.34 0.86
347 348 9.403583 GAGTACTTCCTCCTTCCATCTATATAG 57.596 40.741 3.10 3.10 0.00 1.31
348 349 8.340757 AGTACTTCCTCCTTCCATCTATATAGG 58.659 40.741 9.89 0.00 0.00 2.57
349 350 6.507568 ACTTCCTCCTTCCATCTATATAGGG 58.492 44.000 9.89 4.49 0.00 3.53
350 351 4.884961 TCCTCCTTCCATCTATATAGGGC 58.115 47.826 9.89 0.00 0.00 5.19
351 352 3.970640 CCTCCTTCCATCTATATAGGGCC 59.029 52.174 9.89 0.00 0.00 5.80
352 353 4.327332 CCTCCTTCCATCTATATAGGGCCT 60.327 50.000 12.58 12.58 0.00 5.19
353 354 5.103043 CCTCCTTCCATCTATATAGGGCCTA 60.103 48.000 17.16 17.16 0.00 3.93
354 355 6.432190 TCCTTCCATCTATATAGGGCCTAA 57.568 41.667 18.91 7.61 0.00 2.69
355 356 7.009960 TCCTTCCATCTATATAGGGCCTAAT 57.990 40.000 18.91 14.19 0.00 1.73
356 357 6.846505 TCCTTCCATCTATATAGGGCCTAATG 59.153 42.308 18.91 15.42 0.00 1.90
357 358 6.617371 CCTTCCATCTATATAGGGCCTAATGT 59.383 42.308 18.91 9.02 0.00 2.71
358 359 7.419518 CCTTCCATCTATATAGGGCCTAATGTG 60.420 44.444 18.91 10.40 0.00 3.21
359 360 6.512120 TCCATCTATATAGGGCCTAATGTGT 58.488 40.000 18.91 2.76 0.00 3.72
360 361 6.965866 TCCATCTATATAGGGCCTAATGTGTT 59.034 38.462 18.91 1.94 0.00 3.32
361 362 7.461043 TCCATCTATATAGGGCCTAATGTGTTT 59.539 37.037 18.91 1.12 0.00 2.83
362 363 8.109634 CCATCTATATAGGGCCTAATGTGTTTT 58.890 37.037 18.91 0.30 0.00 2.43
363 364 9.520515 CATCTATATAGGGCCTAATGTGTTTTT 57.479 33.333 18.91 0.00 0.00 1.94
364 365 9.740710 ATCTATATAGGGCCTAATGTGTTTTTC 57.259 33.333 18.91 0.00 0.00 2.29
365 366 8.719596 TCTATATAGGGCCTAATGTGTTTTTCA 58.280 33.333 18.91 0.00 0.00 2.69
366 367 9.349713 CTATATAGGGCCTAATGTGTTTTTCAA 57.650 33.333 18.91 0.00 0.00 2.69
367 368 4.871933 AGGGCCTAATGTGTTTTTCAAG 57.128 40.909 2.82 0.00 0.00 3.02
368 369 4.479158 AGGGCCTAATGTGTTTTTCAAGA 58.521 39.130 2.82 0.00 0.00 3.02
369 370 4.280929 AGGGCCTAATGTGTTTTTCAAGAC 59.719 41.667 2.82 0.00 0.00 3.01
370 371 4.038642 GGGCCTAATGTGTTTTTCAAGACA 59.961 41.667 0.84 0.00 40.28 3.41
371 372 5.222631 GGCCTAATGTGTTTTTCAAGACAG 58.777 41.667 0.00 0.00 39.41 3.51
372 373 5.009610 GGCCTAATGTGTTTTTCAAGACAGA 59.990 40.000 0.00 0.00 39.41 3.41
373 374 5.915196 GCCTAATGTGTTTTTCAAGACAGAC 59.085 40.000 0.00 0.00 39.41 3.51
374 375 6.238759 GCCTAATGTGTTTTTCAAGACAGACT 60.239 38.462 0.00 0.00 39.41 3.24
375 376 7.682021 GCCTAATGTGTTTTTCAAGACAGACTT 60.682 37.037 0.00 0.00 39.41 3.01
376 377 8.190784 CCTAATGTGTTTTTCAAGACAGACTTT 58.809 33.333 0.00 0.00 39.41 2.66
377 378 7.816945 AATGTGTTTTTCAAGACAGACTTTG 57.183 32.000 0.00 0.00 39.41 2.77
378 379 6.567687 TGTGTTTTTCAAGACAGACTTTGA 57.432 33.333 0.00 0.00 36.61 2.69
379 380 6.378582 TGTGTTTTTCAAGACAGACTTTGAC 58.621 36.000 0.00 0.00 36.61 3.18
380 381 6.206634 TGTGTTTTTCAAGACAGACTTTGACT 59.793 34.615 0.00 0.00 36.61 3.41
381 382 7.389330 TGTGTTTTTCAAGACAGACTTTGACTA 59.611 33.333 0.00 0.00 36.61 2.59
382 383 8.398665 GTGTTTTTCAAGACAGACTTTGACTAT 58.601 33.333 0.00 0.00 36.61 2.12
383 384 8.956426 TGTTTTTCAAGACAGACTTTGACTATT 58.044 29.630 0.00 0.00 36.61 1.73
384 385 9.226345 GTTTTTCAAGACAGACTTTGACTATTG 57.774 33.333 0.00 0.00 36.61 1.90
385 386 8.731275 TTTTCAAGACAGACTTTGACTATTGA 57.269 30.769 0.00 0.00 36.61 2.57
386 387 7.715265 TTCAAGACAGACTTTGACTATTGAC 57.285 36.000 0.00 0.00 36.61 3.18
387 388 6.816136 TCAAGACAGACTTTGACTATTGACA 58.184 36.000 0.00 0.00 36.61 3.58
388 389 7.272244 TCAAGACAGACTTTGACTATTGACAA 58.728 34.615 0.00 0.00 36.61 3.18
389 390 7.439356 TCAAGACAGACTTTGACTATTGACAAG 59.561 37.037 0.00 0.00 36.61 3.16
390 391 7.055667 AGACAGACTTTGACTATTGACAAGA 57.944 36.000 0.00 0.00 29.89 3.02
391 392 7.675062 AGACAGACTTTGACTATTGACAAGAT 58.325 34.615 0.00 0.00 29.89 2.40
392 393 8.153550 AGACAGACTTTGACTATTGACAAGATT 58.846 33.333 0.00 0.00 29.89 2.40
393 394 9.424319 GACAGACTTTGACTATTGACAAGATTA 57.576 33.333 0.00 0.00 0.00 1.75
394 395 9.778741 ACAGACTTTGACTATTGACAAGATTAA 57.221 29.630 0.00 0.00 0.00 1.40
401 402 9.665719 TTGACTATTGACAAGATTAATAGCACA 57.334 29.630 0.00 0.00 37.72 4.57
402 403 9.836864 TGACTATTGACAAGATTAATAGCACAT 57.163 29.630 0.00 0.00 37.72 3.21
409 410 9.836864 TGACAAGATTAATAGCACATAAGATGT 57.163 29.630 0.00 0.00 46.22 3.06
447 448 9.866655 ATTATAATATTGGAAGCTCCTTTGACA 57.133 29.630 0.00 0.00 37.46 3.58
448 449 9.866655 TTATAATATTGGAAGCTCCTTTGACAT 57.133 29.630 0.00 0.00 37.46 3.06
450 451 7.573968 AATATTGGAAGCTCCTTTGACATAC 57.426 36.000 0.00 0.00 37.46 2.39
451 452 2.972625 TGGAAGCTCCTTTGACATACG 58.027 47.619 0.00 0.00 37.46 3.06
452 453 2.565391 TGGAAGCTCCTTTGACATACGA 59.435 45.455 0.00 0.00 37.46 3.43
453 454 3.007506 TGGAAGCTCCTTTGACATACGAA 59.992 43.478 0.00 0.00 37.46 3.85
454 455 4.192317 GGAAGCTCCTTTGACATACGAAT 58.808 43.478 0.00 0.00 32.53 3.34
455 456 4.636206 GGAAGCTCCTTTGACATACGAATT 59.364 41.667 0.00 0.00 32.53 2.17
456 457 5.123979 GGAAGCTCCTTTGACATACGAATTT 59.876 40.000 0.00 0.00 32.53 1.82
457 458 5.551760 AGCTCCTTTGACATACGAATTTG 57.448 39.130 0.00 0.00 0.00 2.32
458 459 5.245531 AGCTCCTTTGACATACGAATTTGA 58.754 37.500 0.00 0.00 0.00 2.69
459 460 5.705441 AGCTCCTTTGACATACGAATTTGAA 59.295 36.000 0.00 0.00 0.00 2.69
460 461 6.024049 GCTCCTTTGACATACGAATTTGAAG 58.976 40.000 0.00 0.00 0.00 3.02
461 462 6.494893 TCCTTTGACATACGAATTTGAAGG 57.505 37.500 0.00 0.49 34.01 3.46
462 463 6.001460 TCCTTTGACATACGAATTTGAAGGT 58.999 36.000 0.00 0.00 34.29 3.50
463 464 7.162761 TCCTTTGACATACGAATTTGAAGGTA 58.837 34.615 0.00 0.00 34.29 3.08
464 465 7.827236 TCCTTTGACATACGAATTTGAAGGTAT 59.173 33.333 0.00 0.00 34.29 2.73
465 466 7.910162 CCTTTGACATACGAATTTGAAGGTATG 59.090 37.037 0.00 8.12 44.76 2.39
466 467 6.358118 TGACATACGAATTTGAAGGTATGC 57.642 37.500 0.00 4.54 43.66 3.14
467 468 6.112734 TGACATACGAATTTGAAGGTATGCT 58.887 36.000 0.00 0.00 43.66 3.79
468 469 6.597672 TGACATACGAATTTGAAGGTATGCTT 59.402 34.615 0.00 0.00 43.66 3.91
469 470 7.120579 TGACATACGAATTTGAAGGTATGCTTT 59.879 33.333 0.00 0.00 43.66 3.51
470 471 7.250569 ACATACGAATTTGAAGGTATGCTTTG 58.749 34.615 0.00 0.00 43.66 2.77
471 472 5.705609 ACGAATTTGAAGGTATGCTTTGT 57.294 34.783 0.00 0.00 0.00 2.83
472 473 5.460646 ACGAATTTGAAGGTATGCTTTGTG 58.539 37.500 0.00 0.00 0.00 3.33
473 474 5.009610 ACGAATTTGAAGGTATGCTTTGTGT 59.990 36.000 0.00 0.00 0.00 3.72
474 475 6.205853 ACGAATTTGAAGGTATGCTTTGTGTA 59.794 34.615 0.00 0.00 0.00 2.90
475 476 7.081349 CGAATTTGAAGGTATGCTTTGTGTAA 58.919 34.615 0.00 0.00 0.00 2.41
476 477 7.271223 CGAATTTGAAGGTATGCTTTGTGTAAG 59.729 37.037 0.00 0.00 36.90 2.34
477 478 6.952773 TTTGAAGGTATGCTTTGTGTAAGT 57.047 33.333 0.00 0.00 36.19 2.24
478 479 6.952773 TTGAAGGTATGCTTTGTGTAAGTT 57.047 33.333 0.00 0.00 36.19 2.66
479 480 6.312399 TGAAGGTATGCTTTGTGTAAGTTG 57.688 37.500 0.00 0.00 36.19 3.16
480 481 4.766404 AGGTATGCTTTGTGTAAGTTGC 57.234 40.909 0.00 0.00 36.19 4.17
481 482 4.141287 AGGTATGCTTTGTGTAAGTTGCA 58.859 39.130 0.00 0.00 36.19 4.08
482 483 4.766891 AGGTATGCTTTGTGTAAGTTGCAT 59.233 37.500 0.00 0.00 42.64 3.96
483 484 4.858692 GGTATGCTTTGTGTAAGTTGCATG 59.141 41.667 8.29 0.00 40.65 4.06
484 485 4.589216 ATGCTTTGTGTAAGTTGCATGT 57.411 36.364 0.00 0.00 39.30 3.21
485 486 3.963665 TGCTTTGTGTAAGTTGCATGTC 58.036 40.909 0.00 0.00 36.19 3.06
486 487 3.379688 TGCTTTGTGTAAGTTGCATGTCA 59.620 39.130 0.00 0.00 36.19 3.58
487 488 4.142293 TGCTTTGTGTAAGTTGCATGTCAA 60.142 37.500 0.00 0.00 36.19 3.18
488 489 4.803088 GCTTTGTGTAAGTTGCATGTCAAA 59.197 37.500 0.00 2.93 36.26 2.69
489 490 5.463061 GCTTTGTGTAAGTTGCATGTCAAAT 59.537 36.000 8.10 1.40 36.26 2.32
490 491 6.640499 GCTTTGTGTAAGTTGCATGTCAAATA 59.360 34.615 8.10 0.41 36.26 1.40
491 492 7.329226 GCTTTGTGTAAGTTGCATGTCAAATAT 59.671 33.333 8.10 0.00 36.26 1.28
492 493 9.195411 CTTTGTGTAAGTTGCATGTCAAATATT 57.805 29.630 8.10 3.93 36.26 1.28
493 494 8.518151 TTGTGTAAGTTGCATGTCAAATATTG 57.482 30.769 0.00 0.00 36.26 1.90
494 495 7.656412 TGTGTAAGTTGCATGTCAAATATTGT 58.344 30.769 0.00 0.00 36.26 2.71
495 496 8.140628 TGTGTAAGTTGCATGTCAAATATTGTT 58.859 29.630 0.00 0.00 36.26 2.83
496 497 9.619316 GTGTAAGTTGCATGTCAAATATTGTTA 57.381 29.630 0.00 0.00 36.26 2.41
497 498 9.619316 TGTAAGTTGCATGTCAAATATTGTTAC 57.381 29.630 4.47 4.19 36.26 2.50
498 499 9.840427 GTAAGTTGCATGTCAAATATTGTTACT 57.160 29.630 4.47 0.00 36.26 2.24
499 500 8.970691 AAGTTGCATGTCAAATATTGTTACTC 57.029 30.769 4.47 0.00 36.26 2.59
500 501 7.243487 AGTTGCATGTCAAATATTGTTACTCG 58.757 34.615 4.47 0.00 36.26 4.18
501 502 6.976636 TGCATGTCAAATATTGTTACTCGA 57.023 33.333 0.00 0.00 0.00 4.04
502 503 7.371126 TGCATGTCAAATATTGTTACTCGAA 57.629 32.000 0.00 0.00 0.00 3.71
503 504 7.240674 TGCATGTCAAATATTGTTACTCGAAC 58.759 34.615 0.00 0.00 38.65 3.95
504 505 6.408039 GCATGTCAAATATTGTTACTCGAACG 59.592 38.462 0.00 0.00 41.35 3.95
505 506 7.453034 CATGTCAAATATTGTTACTCGAACGT 58.547 34.615 0.00 0.00 41.35 3.99
506 507 7.410800 TGTCAAATATTGTTACTCGAACGTT 57.589 32.000 0.00 0.00 41.35 3.99
507 508 7.853524 TGTCAAATATTGTTACTCGAACGTTT 58.146 30.769 0.46 0.00 41.35 3.60
508 509 7.794810 TGTCAAATATTGTTACTCGAACGTTTG 59.205 33.333 9.40 9.40 41.35 2.93
509 510 7.267600 GTCAAATATTGTTACTCGAACGTTTGG 59.732 37.037 15.50 8.77 41.35 3.28
510 511 6.790285 AATATTGTTACTCGAACGTTTGGT 57.210 33.333 15.50 13.71 41.35 3.67
511 512 4.720530 ATTGTTACTCGAACGTTTGGTC 57.279 40.909 15.50 0.00 41.35 4.02
512 513 3.162202 TGTTACTCGAACGTTTGGTCA 57.838 42.857 15.50 5.38 41.35 4.02
513 514 3.519579 TGTTACTCGAACGTTTGGTCAA 58.480 40.909 15.50 4.43 41.35 3.18
514 515 3.931468 TGTTACTCGAACGTTTGGTCAAA 59.069 39.130 15.50 3.11 41.35 2.69
515 516 4.033129 TGTTACTCGAACGTTTGGTCAAAG 59.967 41.667 15.50 7.56 41.35 2.77
516 517 2.624636 ACTCGAACGTTTGGTCAAAGT 58.375 42.857 15.50 8.18 0.00 2.66
517 518 3.004862 ACTCGAACGTTTGGTCAAAGTT 58.995 40.909 15.50 4.26 0.00 2.66
518 519 4.183101 ACTCGAACGTTTGGTCAAAGTTA 58.817 39.130 15.50 0.00 0.00 2.24
519 520 4.269363 ACTCGAACGTTTGGTCAAAGTTAG 59.731 41.667 15.50 4.83 0.00 2.34
520 521 3.001533 TCGAACGTTTGGTCAAAGTTAGC 59.998 43.478 15.50 0.00 0.00 3.09
521 522 3.624900 GAACGTTTGGTCAAAGTTAGCC 58.375 45.455 0.46 0.00 0.00 3.93
522 523 2.927028 ACGTTTGGTCAAAGTTAGCCT 58.073 42.857 0.00 0.00 0.00 4.58
523 524 2.876550 ACGTTTGGTCAAAGTTAGCCTC 59.123 45.455 0.00 0.00 0.00 4.70
524 525 2.096417 CGTTTGGTCAAAGTTAGCCTCG 60.096 50.000 0.00 0.00 0.00 4.63
525 526 3.135994 GTTTGGTCAAAGTTAGCCTCGA 58.864 45.455 0.00 0.00 0.00 4.04
526 527 3.478857 TTGGTCAAAGTTAGCCTCGAA 57.521 42.857 0.00 0.00 0.00 3.71
527 528 3.478857 TGGTCAAAGTTAGCCTCGAAA 57.521 42.857 0.00 0.00 0.00 3.46
528 529 3.811083 TGGTCAAAGTTAGCCTCGAAAA 58.189 40.909 0.00 0.00 0.00 2.29
529 530 4.200874 TGGTCAAAGTTAGCCTCGAAAAA 58.799 39.130 0.00 0.00 0.00 1.94
530 531 4.035909 TGGTCAAAGTTAGCCTCGAAAAAC 59.964 41.667 0.00 0.00 0.00 2.43
531 532 4.209112 GTCAAAGTTAGCCTCGAAAAACG 58.791 43.478 0.00 0.00 44.09 3.60
532 533 2.963498 AAGTTAGCCTCGAAAAACGC 57.037 45.000 0.00 0.00 42.26 4.84
533 534 1.873698 AGTTAGCCTCGAAAAACGCA 58.126 45.000 0.00 0.00 42.26 5.24
534 535 2.423577 AGTTAGCCTCGAAAAACGCAT 58.576 42.857 0.00 0.00 42.26 4.73
535 536 2.812011 AGTTAGCCTCGAAAAACGCATT 59.188 40.909 0.00 0.00 42.26 3.56
536 537 3.998341 AGTTAGCCTCGAAAAACGCATTA 59.002 39.130 0.00 0.00 42.26 1.90
537 538 4.092968 AGTTAGCCTCGAAAAACGCATTAG 59.907 41.667 0.00 0.00 42.26 1.73
538 539 1.737793 AGCCTCGAAAAACGCATTAGG 59.262 47.619 0.00 0.00 42.26 2.69
539 540 1.794076 GCCTCGAAAAACGCATTAGGC 60.794 52.381 0.00 0.00 45.73 3.93
540 541 1.202143 CCTCGAAAAACGCATTAGGCC 60.202 52.381 0.00 0.00 42.26 5.19
541 542 0.806241 TCGAAAAACGCATTAGGCCC 59.194 50.000 0.00 0.00 42.26 5.80
542 543 0.808755 CGAAAAACGCATTAGGCCCT 59.191 50.000 0.00 0.00 40.31 5.19
543 544 2.011222 CGAAAAACGCATTAGGCCCTA 58.989 47.619 0.00 0.00 40.31 3.53
544 545 2.616842 CGAAAAACGCATTAGGCCCTAT 59.383 45.455 0.00 0.00 40.31 2.57
545 546 3.810941 CGAAAAACGCATTAGGCCCTATA 59.189 43.478 0.00 0.00 40.31 1.31
546 547 4.454504 CGAAAAACGCATTAGGCCCTATAT 59.545 41.667 0.00 0.00 40.31 0.86
547 548 5.640357 CGAAAAACGCATTAGGCCCTATATA 59.360 40.000 0.00 0.00 40.31 0.86
548 549 6.183360 CGAAAAACGCATTAGGCCCTATATAG 60.183 42.308 0.00 2.46 40.31 1.31
549 550 6.368779 AAAACGCATTAGGCCCTATATAGA 57.631 37.500 11.53 0.00 40.31 1.98
550 551 6.561519 AAACGCATTAGGCCCTATATAGAT 57.438 37.500 11.53 0.00 40.31 1.98
551 552 5.537300 ACGCATTAGGCCCTATATAGATG 57.463 43.478 11.53 6.87 40.31 2.90
552 553 4.345257 ACGCATTAGGCCCTATATAGATGG 59.655 45.833 11.53 6.04 40.31 3.51
553 554 4.588951 CGCATTAGGCCCTATATAGATGGA 59.411 45.833 11.53 0.00 40.31 3.41
554 555 5.070446 CGCATTAGGCCCTATATAGATGGAA 59.930 44.000 11.53 0.00 40.31 3.53
555 556 6.529220 GCATTAGGCCCTATATAGATGGAAG 58.471 44.000 11.53 0.00 36.11 3.46
556 557 6.327626 GCATTAGGCCCTATATAGATGGAAGA 59.672 42.308 11.53 0.00 36.11 2.87
557 558 7.147479 GCATTAGGCCCTATATAGATGGAAGAA 60.147 40.741 11.53 1.20 36.11 2.52
558 559 7.979786 TTAGGCCCTATATAGATGGAAGAAG 57.020 40.000 11.53 0.00 0.00 2.85
559 560 5.284582 AGGCCCTATATAGATGGAAGAAGG 58.715 45.833 11.53 1.87 0.00 3.46
560 561 4.410555 GGCCCTATATAGATGGAAGAAGGG 59.589 50.000 11.53 3.52 44.43 3.95
561 562 5.281314 GCCCTATATAGATGGAAGAAGGGA 58.719 45.833 11.53 0.00 44.39 4.20
562 563 5.365314 GCCCTATATAGATGGAAGAAGGGAG 59.635 48.000 11.53 0.00 44.39 4.30
563 564 6.507568 CCCTATATAGATGGAAGAAGGGAGT 58.492 44.000 11.53 0.00 44.39 3.85
564 565 7.653503 CCCTATATAGATGGAAGAAGGGAGTA 58.346 42.308 11.53 0.00 44.39 2.59
565 566 8.123130 CCCTATATAGATGGAAGAAGGGAGTAA 58.877 40.741 11.53 0.00 44.39 2.24
566 567 9.548631 CCTATATAGATGGAAGAAGGGAGTAAA 57.451 37.037 11.53 0.00 0.00 2.01
570 571 6.394345 AGATGGAAGAAGGGAGTAAAATGT 57.606 37.500 0.00 0.00 0.00 2.71
571 572 6.794534 AGATGGAAGAAGGGAGTAAAATGTT 58.205 36.000 0.00 0.00 0.00 2.71
572 573 6.887002 AGATGGAAGAAGGGAGTAAAATGTTC 59.113 38.462 0.00 0.00 0.00 3.18
573 574 6.200878 TGGAAGAAGGGAGTAAAATGTTCT 57.799 37.500 0.00 0.00 0.00 3.01
574 575 6.238648 TGGAAGAAGGGAGTAAAATGTTCTC 58.761 40.000 0.00 0.00 0.00 2.87
575 576 5.648526 GGAAGAAGGGAGTAAAATGTTCTCC 59.351 44.000 0.00 0.00 44.78 3.71
584 585 8.575649 GGAGTAAAATGTTCTCCCATAAGAAA 57.424 34.615 0.00 0.00 41.09 2.52
585 586 9.190317 GGAGTAAAATGTTCTCCCATAAGAAAT 57.810 33.333 0.00 0.00 41.09 2.17
590 591 8.670521 AAATGTTCTCCCATAAGAAATTTCCT 57.329 30.769 14.61 4.47 37.04 3.36
591 592 7.888250 ATGTTCTCCCATAAGAAATTTCCTC 57.112 36.000 14.61 0.00 37.04 3.71
592 593 6.789268 TGTTCTCCCATAAGAAATTTCCTCA 58.211 36.000 14.61 0.72 37.04 3.86
593 594 7.413446 TGTTCTCCCATAAGAAATTTCCTCAT 58.587 34.615 14.61 3.09 37.04 2.90
594 595 7.895429 TGTTCTCCCATAAGAAATTTCCTCATT 59.105 33.333 14.61 5.23 37.04 2.57
595 596 8.753133 GTTCTCCCATAAGAAATTTCCTCATTT 58.247 33.333 14.61 4.87 37.04 2.32
596 597 8.899887 TCTCCCATAAGAAATTTCCTCATTTT 57.100 30.769 14.61 4.18 0.00 1.82
597 598 8.752187 TCTCCCATAAGAAATTTCCTCATTTTG 58.248 33.333 14.61 7.70 0.00 2.44
598 599 8.434589 TCCCATAAGAAATTTCCTCATTTTGT 57.565 30.769 14.61 0.00 0.00 2.83
599 600 9.540538 TCCCATAAGAAATTTCCTCATTTTGTA 57.459 29.630 14.61 0.00 0.00 2.41
661 662 8.816640 AAGATGAAGAAAAACAATAATGCGTT 57.183 26.923 0.00 0.00 0.00 4.84
662 663 8.231304 AGATGAAGAAAAACAATAATGCGTTG 57.769 30.769 0.08 0.00 0.00 4.10
663 664 6.209129 TGAAGAAAAACAATAATGCGTTGC 57.791 33.333 0.08 0.00 0.00 4.17
664 665 5.750547 TGAAGAAAAACAATAATGCGTTGCA 59.249 32.000 0.08 0.00 44.86 4.08
665 666 5.574815 AGAAAAACAATAATGCGTTGCAC 57.425 34.783 0.08 0.00 43.04 4.57
689 692 1.136891 GCAAAACCAGCAAGGAACACT 59.863 47.619 1.83 0.00 41.22 3.55
690 693 2.418609 GCAAAACCAGCAAGGAACACTT 60.419 45.455 1.83 0.00 41.22 3.16
698 701 4.641989 CCAGCAAGGAACACTTAGCAATAT 59.358 41.667 0.00 0.00 41.22 1.28
699 702 5.822519 CCAGCAAGGAACACTTAGCAATATA 59.177 40.000 0.00 0.00 41.22 0.86
700 703 6.488006 CCAGCAAGGAACACTTAGCAATATAT 59.512 38.462 0.00 0.00 41.22 0.86
701 704 7.661437 CCAGCAAGGAACACTTAGCAATATATA 59.339 37.037 0.00 0.00 41.22 0.86
876 1041 1.433064 GCTCCTCACTCTCAGCTCG 59.567 63.158 0.00 0.00 0.00 5.03
906 1071 5.942826 GCTTCTTGGCAGCCTATAAATAGAT 59.057 40.000 14.15 0.00 32.05 1.98
924 1089 3.008330 AGATGCTCTTGTGCAACTCATC 58.992 45.455 1.50 0.00 46.61 2.92
941 1106 3.402681 CCGGCACACCCATCCTCT 61.403 66.667 0.00 0.00 0.00 3.69
975 1140 6.017934 CACAGAGAGAGATCTTCTAGCTACAC 60.018 46.154 0.00 0.00 35.87 2.90
996 1161 2.434185 GTTGCCGTCGATCCAGCA 60.434 61.111 0.00 0.00 0.00 4.41
1218 1383 0.959553 ACAAGTCCATCGTCGTCACT 59.040 50.000 0.00 0.00 0.00 3.41
1227 1392 1.745566 TCGTCGTCACTGTACGTTTG 58.254 50.000 0.00 0.00 43.31 2.93
1274 1440 4.773323 ATTGTAGCTTGGTTCTTTCTGC 57.227 40.909 0.00 0.00 0.00 4.26
1437 1603 4.560128 TCAAATGTCAACTCTCCTCTTCG 58.440 43.478 0.00 0.00 0.00 3.79
1443 1609 1.474879 CAACTCTCCTCTTCGTCCTCC 59.525 57.143 0.00 0.00 0.00 4.30
1445 1611 1.064979 ACTCTCCTCTTCGTCCTCCTC 60.065 57.143 0.00 0.00 0.00 3.71
1524 1690 7.040409 TGCGAGACACTAACATATCTATCACAT 60.040 37.037 0.00 0.00 0.00 3.21
1581 1747 5.512788 CGAATAACACCAGAATGACATTTGC 59.487 40.000 1.39 0.00 39.69 3.68
1583 1749 7.413988 CGAATAACACCAGAATGACATTTGCTA 60.414 37.037 1.39 0.00 39.69 3.49
1587 1753 6.179756 ACACCAGAATGACATTTGCTACATA 58.820 36.000 1.39 0.00 39.69 2.29
1629 1795 4.062991 ACCACCGTAAACAGAGAAATGAC 58.937 43.478 0.00 0.00 0.00 3.06
1661 1827 6.145048 TCACCGATAAACGAGAAAAAGAAGAC 59.855 38.462 0.00 0.00 45.77 3.01
1740 1906 4.037684 ACCATTGTATAGTACGAGGAGCAC 59.962 45.833 0.00 0.00 0.00 4.40
1794 1960 0.522180 TCTCCTTCGTCTTGCTCGAC 59.478 55.000 0.00 0.00 37.05 4.20
1848 2014 2.034066 ATTGGCGTCACACCCCTG 59.966 61.111 0.00 0.00 0.00 4.45
1877 2043 2.952310 GCTGGGGAATTGATGGTAAGTC 59.048 50.000 0.00 0.00 0.00 3.01
1878 2044 3.624707 GCTGGGGAATTGATGGTAAGTCA 60.625 47.826 0.00 0.00 0.00 3.41
1879 2045 4.599041 CTGGGGAATTGATGGTAAGTCAA 58.401 43.478 0.00 0.00 39.65 3.18
1880 2046 5.203528 CTGGGGAATTGATGGTAAGTCAAT 58.796 41.667 0.00 0.00 45.53 2.57
1881 2047 4.955450 TGGGGAATTGATGGTAAGTCAATG 59.045 41.667 2.48 0.00 43.49 2.82
1882 2048 4.956075 GGGGAATTGATGGTAAGTCAATGT 59.044 41.667 2.48 0.00 43.49 2.71
1883 2049 5.422012 GGGGAATTGATGGTAAGTCAATGTT 59.578 40.000 2.48 0.00 43.49 2.71
1884 2050 6.605594 GGGGAATTGATGGTAAGTCAATGTTA 59.394 38.462 2.48 0.00 43.49 2.41
1885 2051 7.123547 GGGGAATTGATGGTAAGTCAATGTTAA 59.876 37.037 2.48 0.00 43.49 2.01
1886 2052 8.527810 GGGAATTGATGGTAAGTCAATGTTAAA 58.472 33.333 2.48 0.00 43.49 1.52
1911 2077 7.850268 TTTTATTCAACAATGTGACACGATG 57.150 32.000 0.22 5.07 0.00 3.84
1915 2081 1.159285 ACAATGTGACACGATGCCTG 58.841 50.000 9.60 0.26 0.00 4.85
1973 2139 9.708092 ACTACCTAGTCAAGAACAAGTAAAATC 57.292 33.333 0.00 0.00 0.00 2.17
2172 2338 5.068636 GTCATTCCTTCAGTGCCATATGAT 58.931 41.667 3.65 0.00 0.00 2.45
2196 2362 2.158549 ACTTGCTCTCAGGAAGGCTTTT 60.159 45.455 0.00 0.00 46.33 2.27
2342 2508 2.042569 TGTTCTACTCTCTGGTGGCCTA 59.957 50.000 3.32 0.00 0.00 3.93
2423 2589 0.548510 GCTGGGGGACTAAGCTTCAT 59.451 55.000 0.00 0.00 37.14 2.57
2545 2728 0.107459 GGTCACCTGATCTGAAGGCC 60.107 60.000 0.00 0.00 38.48 5.19
2572 2755 3.821306 GGTAGCCAATTACCTGGGG 57.179 57.895 0.00 0.00 40.00 4.96
2624 2807 1.722636 GGTAGCAAGCATGAGCAGCC 61.723 60.000 0.00 0.00 45.49 4.85
2800 2994 1.135859 CGCAAGATCAAGTCACTTGGC 60.136 52.381 17.71 11.17 40.09 4.52
3146 3360 7.331791 AGCTCAAACCTTACGAATCTAGAAAT 58.668 34.615 0.00 0.00 0.00 2.17
3256 3486 6.179040 ACCTGATCTTGGAAGAATTGAGAAG 58.821 40.000 11.38 0.00 38.77 2.85
3304 3534 1.304381 GGAGCAACCATTCCTGCCA 60.304 57.895 0.00 0.00 39.47 4.92
3327 3557 8.547894 GCCAAAGGTAACAGTTTTTAATTCAAG 58.452 33.333 0.00 0.00 41.41 3.02
3373 3603 4.423625 AGAGCAGTGGAGTTAACAGTTT 57.576 40.909 8.61 0.00 0.00 2.66
3513 3744 1.462283 CTGCCTCTCATGTTCAACACG 59.538 52.381 0.00 0.00 0.00 4.49
3539 3770 7.477422 GTCACTGTTATGCGTAAAATTGTAGTG 59.523 37.037 0.00 8.46 33.79 2.74
3602 3845 6.862209 TGTAAAATTATTGATGCAGGTGACC 58.138 36.000 0.00 0.00 0.00 4.02
3638 3881 4.155826 TCAAATGCAAAGTTCATCTACCCG 59.844 41.667 0.00 0.00 0.00 5.28
3784 4027 5.954296 ACTATGTTGATGCAAGCATATCC 57.046 39.130 7.64 0.00 36.70 2.59
3796 4039 2.744787 GCATATCCGTTGCTCTTGTG 57.255 50.000 0.00 0.00 37.14 3.33
3875 4118 2.435693 GGCGGTAGAGTGGGATGCT 61.436 63.158 0.00 0.00 0.00 3.79
3884 4127 1.448540 GTGGGATGCTCAGTGGTCG 60.449 63.158 0.00 0.00 0.00 4.79
3966 4209 0.106819 GCATCTCCCAGCAACCATCT 60.107 55.000 0.00 0.00 0.00 2.90
3969 4212 1.361204 TCTCCCAGCAACCATCTTGA 58.639 50.000 0.00 0.00 0.00 3.02
4007 4250 0.103026 CGAGGATGATCGAGGTTGCA 59.897 55.000 0.00 0.00 45.56 4.08
4141 4384 7.920160 TGAGTGAAGATTGTGCATTAATGTA 57.080 32.000 16.61 9.76 0.00 2.29
4215 4458 6.649973 TGGCAACTTCCATCAAAACATTATTG 59.350 34.615 0.00 0.00 37.61 1.90
4269 4512 7.121315 GCTACATCTAACCAACTTGAAAGGATT 59.879 37.037 0.00 0.00 0.00 3.01
4359 4602 7.441890 TTTTCTGAATACAAAGCGGTATGAA 57.558 32.000 0.00 0.00 34.32 2.57
4369 4612 3.238108 AGCGGTATGAACTGAACAGAG 57.762 47.619 8.87 0.00 33.42 3.35
4485 4732 6.738114 AGATCACTTGTTTACAACCAACATG 58.262 36.000 0.00 0.00 34.13 3.21
4563 4810 3.641437 TTGGAATGCTGAAAGGTTTCG 57.359 42.857 0.00 0.00 40.01 3.46
4573 4820 1.947456 GAAAGGTTTCGCAGGTTCTGT 59.053 47.619 0.00 0.00 33.43 3.41
4613 4860 4.346730 TCCAGGTGAATTTCATGCATTCT 58.653 39.130 14.87 0.00 32.63 2.40
4750 4997 6.261381 ACAAAATAAACTCGCACCAGAAGTAA 59.739 34.615 0.00 0.00 0.00 2.24
4751 4998 5.857822 AATAAACTCGCACCAGAAGTAAC 57.142 39.130 0.00 0.00 0.00 2.50
4752 4999 2.902705 AACTCGCACCAGAAGTAACA 57.097 45.000 0.00 0.00 0.00 2.41
4753 5000 2.902705 ACTCGCACCAGAAGTAACAA 57.097 45.000 0.00 0.00 0.00 2.83
4754 5001 2.480845 ACTCGCACCAGAAGTAACAAC 58.519 47.619 0.00 0.00 0.00 3.32
4921 5168 0.178068 CCACATTAGCTAGCACCGGT 59.822 55.000 18.83 0.00 0.00 5.28
4924 5171 3.059884 CACATTAGCTAGCACCGGTATG 58.940 50.000 18.83 7.55 0.00 2.39
4999 5246 7.229306 TCCAACTTAAGATACCATGAATGATGC 59.771 37.037 10.09 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 88 3.782042 GACATGTTCGTCCTCCGC 58.218 61.111 0.00 0.00 36.19 5.54
107 108 1.343465 CCCATGGCTTACGTAGTAGGG 59.657 57.143 6.09 0.00 46.93 3.53
122 123 3.086282 TGAATATGCTATGCTGCCCATG 58.914 45.455 0.00 0.00 35.34 3.66
164 165 0.251916 TAAGGGGTGCATCTCGTTGG 59.748 55.000 0.00 0.00 0.00 3.77
169 170 3.388024 TCTGTATGTAAGGGGTGCATCTC 59.612 47.826 0.00 0.00 34.06 2.75
182 183 7.504911 GGAGGGAGTACTTGTTATCTGTATGTA 59.495 40.741 0.00 0.00 0.00 2.29
190 191 3.067883 GGACGGAGGGAGTACTTGTTATC 59.932 52.174 0.00 0.00 0.00 1.75
194 195 0.964358 CGGACGGAGGGAGTACTTGT 60.964 60.000 0.00 0.00 0.00 3.16
198 199 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
201 202 1.755380 ACTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
202 203 1.856629 ACTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
203 204 2.277084 CAACTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
204 205 2.928116 GACAACTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
205 206 3.581755 TGACAACTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
207 208 3.930229 TGATGACAACTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
209 210 8.073768 TCTTTTTGATGACAACTATTTTCGGAC 58.926 33.333 0.00 0.00 35.63 4.79
210 211 8.160521 TCTTTTTGATGACAACTATTTTCGGA 57.839 30.769 0.00 0.00 35.63 4.55
219 220 8.923270 TCCCTTTTATTCTTTTTGATGACAACT 58.077 29.630 0.00 0.00 35.63 3.16
220 221 9.541143 TTCCCTTTTATTCTTTTTGATGACAAC 57.459 29.630 0.00 0.00 35.63 3.32
222 223 9.709495 CATTCCCTTTTATTCTTTTTGATGACA 57.291 29.630 0.00 0.00 0.00 3.58
223 224 9.710900 ACATTCCCTTTTATTCTTTTTGATGAC 57.289 29.630 0.00 0.00 0.00 3.06
265 266 9.206690 TGGATGAAAAGAGATGTATCTAGAACT 57.793 33.333 0.00 0.00 37.25 3.01
266 267 9.995003 ATGGATGAAAAGAGATGTATCTAGAAC 57.005 33.333 0.00 0.00 37.25 3.01
271 272 9.690913 TCAAAATGGATGAAAAGAGATGTATCT 57.309 29.630 0.00 0.00 40.50 1.98
286 287 8.800972 CGAAAATAGTTGTCATCAAAATGGATG 58.199 33.333 0.00 0.00 44.78 3.51
287 288 7.975616 CCGAAAATAGTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 35.20 3.41
288 289 7.175816 TCCGAAAATAGTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 35.20 3.41
289 290 7.273381 GTCCGAAAATAGTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 35.20 3.16
290 291 7.007367 CGTCCGAAAATAGTTGTCATCAAAATG 59.993 37.037 0.00 0.00 35.20 2.32
291 292 7.021196 CGTCCGAAAATAGTTGTCATCAAAAT 58.979 34.615 0.00 0.00 35.20 1.82
292 293 6.367421 CGTCCGAAAATAGTTGTCATCAAAA 58.633 36.000 0.00 0.00 35.20 2.44
293 294 5.106869 CCGTCCGAAAATAGTTGTCATCAAA 60.107 40.000 0.00 0.00 35.20 2.69
294 295 4.390603 CCGTCCGAAAATAGTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
295 296 3.930229 CCGTCCGAAAATAGTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
296 297 4.178540 TCCGTCCGAAAATAGTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
297 298 4.181578 CTCCGTCCGAAAATAGTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
298 299 3.581755 CTCCGTCCGAAAATAGTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
299 300 2.928116 CCTCCGTCCGAAAATAGTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
300 301 2.354403 CCCTCCGTCCGAAAATAGTTGT 60.354 50.000 0.00 0.00 0.00 3.32
301 302 2.093869 TCCCTCCGTCCGAAAATAGTTG 60.094 50.000 0.00 0.00 0.00 3.16
302 303 2.167900 CTCCCTCCGTCCGAAAATAGTT 59.832 50.000 0.00 0.00 0.00 2.24
303 304 1.755380 CTCCCTCCGTCCGAAAATAGT 59.245 52.381 0.00 0.00 0.00 2.12
304 305 1.755380 ACTCCCTCCGTCCGAAAATAG 59.245 52.381 0.00 0.00 0.00 1.73
305 306 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
306 307 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
307 308 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
308 309 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
309 310 0.038744 AAGTACTCCCTCCGTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
310 311 0.393537 GAAGTACTCCCTCCGTCCGA 60.394 60.000 0.00 0.00 0.00 4.55
311 312 1.382692 GGAAGTACTCCCTCCGTCCG 61.383 65.000 0.00 0.00 38.44 4.79
312 313 0.033306 AGGAAGTACTCCCTCCGTCC 60.033 60.000 0.00 0.00 46.81 4.79
313 314 1.391577 GAGGAAGTACTCCCTCCGTC 58.608 60.000 17.12 6.39 46.81 4.79
314 315 3.592546 GAGGAAGTACTCCCTCCGT 57.407 57.895 17.12 0.94 46.81 4.69
321 322 9.403583 CTATATAGATGGAAGGAGGAAGTACTC 57.596 40.741 3.44 0.00 36.76 2.59
322 323 8.340757 CCTATATAGATGGAAGGAGGAAGTACT 58.659 40.741 11.53 0.00 0.00 2.73
323 324 7.562088 CCCTATATAGATGGAAGGAGGAAGTAC 59.438 44.444 11.53 0.00 0.00 2.73
324 325 7.653503 CCCTATATAGATGGAAGGAGGAAGTA 58.346 42.308 11.53 0.00 0.00 2.24
325 326 6.507568 CCCTATATAGATGGAAGGAGGAAGT 58.492 44.000 11.53 0.00 0.00 3.01
326 327 5.365314 GCCCTATATAGATGGAAGGAGGAAG 59.635 48.000 11.53 0.00 0.00 3.46
327 328 5.281314 GCCCTATATAGATGGAAGGAGGAA 58.719 45.833 11.53 0.00 0.00 3.36
328 329 4.327010 GGCCCTATATAGATGGAAGGAGGA 60.327 50.000 11.53 0.00 0.00 3.71
329 330 3.970640 GGCCCTATATAGATGGAAGGAGG 59.029 52.174 11.53 1.87 0.00 4.30
330 331 4.889780 AGGCCCTATATAGATGGAAGGAG 58.110 47.826 11.53 0.00 0.00 3.69
331 332 4.994411 AGGCCCTATATAGATGGAAGGA 57.006 45.455 11.53 0.00 0.00 3.36
332 333 6.617371 ACATTAGGCCCTATATAGATGGAAGG 59.383 42.308 11.53 3.94 0.00 3.46
333 334 7.126421 ACACATTAGGCCCTATATAGATGGAAG 59.874 40.741 11.53 3.88 0.00 3.46
334 335 6.965866 ACACATTAGGCCCTATATAGATGGAA 59.034 38.462 11.53 0.00 0.00 3.53
335 336 6.512120 ACACATTAGGCCCTATATAGATGGA 58.488 40.000 11.53 0.00 0.00 3.41
336 337 6.814954 ACACATTAGGCCCTATATAGATGG 57.185 41.667 11.53 6.04 0.00 3.51
337 338 9.520515 AAAAACACATTAGGCCCTATATAGATG 57.479 33.333 11.53 8.07 0.00 2.90
338 339 9.740710 GAAAAACACATTAGGCCCTATATAGAT 57.259 33.333 11.53 0.00 0.00 1.98
339 340 8.719596 TGAAAAACACATTAGGCCCTATATAGA 58.280 33.333 11.53 0.00 0.00 1.98
340 341 8.918202 TGAAAAACACATTAGGCCCTATATAG 57.082 34.615 0.00 2.46 0.00 1.31
341 342 9.349713 CTTGAAAAACACATTAGGCCCTATATA 57.650 33.333 0.00 0.00 0.00 0.86
342 343 8.058847 TCTTGAAAAACACATTAGGCCCTATAT 58.941 33.333 0.00 0.00 0.00 0.86
343 344 7.338449 GTCTTGAAAAACACATTAGGCCCTATA 59.662 37.037 0.00 0.00 0.00 1.31
344 345 6.152831 GTCTTGAAAAACACATTAGGCCCTAT 59.847 38.462 0.00 0.00 0.00 2.57
345 346 5.475564 GTCTTGAAAAACACATTAGGCCCTA 59.524 40.000 0.00 0.00 0.00 3.53
346 347 4.280929 GTCTTGAAAAACACATTAGGCCCT 59.719 41.667 0.00 0.00 0.00 5.19
347 348 4.038642 TGTCTTGAAAAACACATTAGGCCC 59.961 41.667 0.00 0.00 0.00 5.80
348 349 5.009610 TCTGTCTTGAAAAACACATTAGGCC 59.990 40.000 0.00 0.00 0.00 5.19
349 350 5.915196 GTCTGTCTTGAAAAACACATTAGGC 59.085 40.000 0.00 0.00 0.00 3.93
350 351 7.264373 AGTCTGTCTTGAAAAACACATTAGG 57.736 36.000 0.00 0.00 0.00 2.69
351 352 9.013490 CAAAGTCTGTCTTGAAAAACACATTAG 57.987 33.333 0.00 0.00 36.40 1.73
352 353 8.735315 TCAAAGTCTGTCTTGAAAAACACATTA 58.265 29.630 0.00 0.00 36.40 1.90
353 354 7.542130 GTCAAAGTCTGTCTTGAAAAACACATT 59.458 33.333 0.00 0.00 36.40 2.71
354 355 7.029563 GTCAAAGTCTGTCTTGAAAAACACAT 58.970 34.615 0.00 0.00 36.40 3.21
355 356 6.206634 AGTCAAAGTCTGTCTTGAAAAACACA 59.793 34.615 0.00 0.00 36.40 3.72
356 357 6.612306 AGTCAAAGTCTGTCTTGAAAAACAC 58.388 36.000 0.00 0.00 36.40 3.32
357 358 6.817765 AGTCAAAGTCTGTCTTGAAAAACA 57.182 33.333 0.00 0.00 36.40 2.83
358 359 9.226345 CAATAGTCAAAGTCTGTCTTGAAAAAC 57.774 33.333 0.00 0.00 36.40 2.43
359 360 9.173021 TCAATAGTCAAAGTCTGTCTTGAAAAA 57.827 29.630 0.00 0.00 36.40 1.94
360 361 8.612619 GTCAATAGTCAAAGTCTGTCTTGAAAA 58.387 33.333 0.00 0.00 36.40 2.29
361 362 7.768582 TGTCAATAGTCAAAGTCTGTCTTGAAA 59.231 33.333 0.00 0.00 36.40 2.69
362 363 7.272244 TGTCAATAGTCAAAGTCTGTCTTGAA 58.728 34.615 0.00 0.00 36.40 2.69
363 364 6.816136 TGTCAATAGTCAAAGTCTGTCTTGA 58.184 36.000 0.00 0.00 36.40 3.02
364 365 7.439356 TCTTGTCAATAGTCAAAGTCTGTCTTG 59.561 37.037 0.00 0.00 36.40 3.02
365 366 7.500992 TCTTGTCAATAGTCAAAGTCTGTCTT 58.499 34.615 0.00 0.00 38.10 3.01
366 367 7.055667 TCTTGTCAATAGTCAAAGTCTGTCT 57.944 36.000 0.00 0.00 0.00 3.41
367 368 7.897575 ATCTTGTCAATAGTCAAAGTCTGTC 57.102 36.000 0.00 0.00 0.00 3.51
368 369 9.778741 TTAATCTTGTCAATAGTCAAAGTCTGT 57.221 29.630 0.00 0.00 0.00 3.41
375 376 9.665719 TGTGCTATTAATCTTGTCAATAGTCAA 57.334 29.630 0.00 0.00 35.57 3.18
376 377 9.836864 ATGTGCTATTAATCTTGTCAATAGTCA 57.163 29.630 0.00 0.00 35.57 3.41
383 384 9.836864 ACATCTTATGTGCTATTAATCTTGTCA 57.163 29.630 0.00 0.00 43.01 3.58
421 422 9.866655 TGTCAAAGGAGCTTCCAATATTATAAT 57.133 29.630 2.97 2.97 39.61 1.28
422 423 9.866655 ATGTCAAAGGAGCTTCCAATATTATAA 57.133 29.630 5.21 0.00 39.61 0.98
424 425 9.289782 GTATGTCAAAGGAGCTTCCAATATTAT 57.710 33.333 5.21 0.00 39.61 1.28
425 426 7.441157 CGTATGTCAAAGGAGCTTCCAATATTA 59.559 37.037 5.21 0.00 39.61 0.98
426 427 6.260936 CGTATGTCAAAGGAGCTTCCAATATT 59.739 38.462 5.21 0.00 39.61 1.28
427 428 5.760253 CGTATGTCAAAGGAGCTTCCAATAT 59.240 40.000 5.21 0.00 39.61 1.28
428 429 5.105106 TCGTATGTCAAAGGAGCTTCCAATA 60.105 40.000 5.21 0.00 39.61 1.90
429 430 3.941483 CGTATGTCAAAGGAGCTTCCAAT 59.059 43.478 5.21 0.00 39.61 3.16
430 431 3.007506 TCGTATGTCAAAGGAGCTTCCAA 59.992 43.478 5.21 0.00 39.61 3.53
431 432 2.565391 TCGTATGTCAAAGGAGCTTCCA 59.435 45.455 5.21 0.00 39.61 3.53
432 433 3.247006 TCGTATGTCAAAGGAGCTTCC 57.753 47.619 0.00 0.00 36.58 3.46
433 434 5.803020 AATTCGTATGTCAAAGGAGCTTC 57.197 39.130 0.00 0.00 0.00 3.86
434 435 5.705441 TCAAATTCGTATGTCAAAGGAGCTT 59.295 36.000 0.00 0.00 0.00 3.74
435 436 5.245531 TCAAATTCGTATGTCAAAGGAGCT 58.754 37.500 0.00 0.00 0.00 4.09
436 437 5.545658 TCAAATTCGTATGTCAAAGGAGC 57.454 39.130 0.00 0.00 0.00 4.70
437 438 6.149474 ACCTTCAAATTCGTATGTCAAAGGAG 59.851 38.462 8.92 0.00 35.74 3.69
438 439 6.001460 ACCTTCAAATTCGTATGTCAAAGGA 58.999 36.000 8.92 0.00 35.74 3.36
439 440 6.254281 ACCTTCAAATTCGTATGTCAAAGG 57.746 37.500 0.00 0.00 37.39 3.11
440 441 7.429340 GCATACCTTCAAATTCGTATGTCAAAG 59.571 37.037 0.00 0.00 40.02 2.77
441 442 7.120579 AGCATACCTTCAAATTCGTATGTCAAA 59.879 33.333 0.00 0.00 40.02 2.69
442 443 6.597672 AGCATACCTTCAAATTCGTATGTCAA 59.402 34.615 0.00 0.00 40.02 3.18
443 444 6.112734 AGCATACCTTCAAATTCGTATGTCA 58.887 36.000 0.00 0.00 40.02 3.58
444 445 6.604735 AGCATACCTTCAAATTCGTATGTC 57.395 37.500 0.00 0.00 40.02 3.06
445 446 7.094377 ACAAAGCATACCTTCAAATTCGTATGT 60.094 33.333 0.00 0.00 40.02 2.29
446 447 7.218773 CACAAAGCATACCTTCAAATTCGTATG 59.781 37.037 0.00 0.00 40.55 2.39
447 448 7.094377 ACACAAAGCATACCTTCAAATTCGTAT 60.094 33.333 0.00 0.00 31.99 3.06
448 449 6.205853 ACACAAAGCATACCTTCAAATTCGTA 59.794 34.615 0.00 0.00 31.99 3.43
449 450 5.009610 ACACAAAGCATACCTTCAAATTCGT 59.990 36.000 0.00 0.00 31.99 3.85
450 451 5.460646 ACACAAAGCATACCTTCAAATTCG 58.539 37.500 0.00 0.00 31.99 3.34
451 452 8.082242 ACTTACACAAAGCATACCTTCAAATTC 58.918 33.333 0.00 0.00 38.93 2.17
452 453 7.951591 ACTTACACAAAGCATACCTTCAAATT 58.048 30.769 0.00 0.00 38.93 1.82
453 454 7.524717 ACTTACACAAAGCATACCTTCAAAT 57.475 32.000 0.00 0.00 38.93 2.32
454 455 6.952773 ACTTACACAAAGCATACCTTCAAA 57.047 33.333 0.00 0.00 38.93 2.69
455 456 6.734137 CAACTTACACAAAGCATACCTTCAA 58.266 36.000 0.00 0.00 38.93 2.69
456 457 5.278266 GCAACTTACACAAAGCATACCTTCA 60.278 40.000 0.00 0.00 38.93 3.02
457 458 5.154222 GCAACTTACACAAAGCATACCTTC 58.846 41.667 0.00 0.00 38.93 3.46
458 459 4.582656 TGCAACTTACACAAAGCATACCTT 59.417 37.500 0.00 0.00 38.93 3.50
459 460 4.141287 TGCAACTTACACAAAGCATACCT 58.859 39.130 0.00 0.00 38.93 3.08
460 461 4.497473 TGCAACTTACACAAAGCATACC 57.503 40.909 0.00 0.00 38.93 2.73
461 462 5.460646 ACATGCAACTTACACAAAGCATAC 58.539 37.500 0.00 0.00 40.38 2.39
462 463 5.240403 TGACATGCAACTTACACAAAGCATA 59.760 36.000 0.00 0.00 40.38 3.14
463 464 4.037803 TGACATGCAACTTACACAAAGCAT 59.962 37.500 0.00 0.00 42.82 3.79
464 465 3.379688 TGACATGCAACTTACACAAAGCA 59.620 39.130 0.00 0.00 38.93 3.91
465 466 3.963665 TGACATGCAACTTACACAAAGC 58.036 40.909 0.00 0.00 38.93 3.51
466 467 8.746922 ATATTTGACATGCAACTTACACAAAG 57.253 30.769 0.00 0.00 41.33 2.77
467 468 8.976471 CAATATTTGACATGCAACTTACACAAA 58.024 29.630 0.00 0.00 35.91 2.83
468 469 8.140628 ACAATATTTGACATGCAACTTACACAA 58.859 29.630 0.00 0.00 35.91 3.33
469 470 7.656412 ACAATATTTGACATGCAACTTACACA 58.344 30.769 0.00 0.00 35.91 3.72
470 471 8.519492 AACAATATTTGACATGCAACTTACAC 57.481 30.769 0.00 0.00 35.91 2.90
471 472 9.619316 GTAACAATATTTGACATGCAACTTACA 57.381 29.630 0.00 0.00 35.91 2.41
472 473 9.840427 AGTAACAATATTTGACATGCAACTTAC 57.160 29.630 0.00 0.00 35.91 2.34
474 475 7.750458 CGAGTAACAATATTTGACATGCAACTT 59.250 33.333 0.00 0.00 35.91 2.66
475 476 7.119116 TCGAGTAACAATATTTGACATGCAACT 59.881 33.333 0.00 0.00 35.91 3.16
476 477 7.240674 TCGAGTAACAATATTTGACATGCAAC 58.759 34.615 0.00 0.00 35.91 4.17
477 478 7.371126 TCGAGTAACAATATTTGACATGCAA 57.629 32.000 0.00 0.00 33.88 4.08
478 479 6.976636 TCGAGTAACAATATTTGACATGCA 57.023 33.333 0.00 0.00 0.00 3.96
479 480 6.408039 CGTTCGAGTAACAATATTTGACATGC 59.592 38.462 0.00 0.00 38.03 4.06
480 481 7.453034 ACGTTCGAGTAACAATATTTGACATG 58.547 34.615 0.00 0.00 38.03 3.21
481 482 7.591006 ACGTTCGAGTAACAATATTTGACAT 57.409 32.000 0.00 0.00 38.03 3.06
482 483 7.410800 AACGTTCGAGTAACAATATTTGACA 57.589 32.000 0.00 0.00 38.03 3.58
483 484 7.267600 CCAAACGTTCGAGTAACAATATTTGAC 59.732 37.037 0.00 0.00 38.03 3.18
484 485 7.041916 ACCAAACGTTCGAGTAACAATATTTGA 60.042 33.333 0.00 0.00 38.03 2.69
485 486 7.073265 ACCAAACGTTCGAGTAACAATATTTG 58.927 34.615 0.00 0.00 38.03 2.32
486 487 7.041916 TGACCAAACGTTCGAGTAACAATATTT 60.042 33.333 0.00 0.00 38.03 1.40
487 488 6.424509 TGACCAAACGTTCGAGTAACAATATT 59.575 34.615 0.00 0.00 38.03 1.28
488 489 5.927689 TGACCAAACGTTCGAGTAACAATAT 59.072 36.000 0.00 0.00 38.03 1.28
489 490 5.288015 TGACCAAACGTTCGAGTAACAATA 58.712 37.500 0.00 0.00 38.03 1.90
490 491 4.121317 TGACCAAACGTTCGAGTAACAAT 58.879 39.130 0.00 0.00 38.03 2.71
491 492 3.519579 TGACCAAACGTTCGAGTAACAA 58.480 40.909 0.00 0.00 38.03 2.83
492 493 3.162202 TGACCAAACGTTCGAGTAACA 57.838 42.857 0.00 0.00 38.03 2.41
493 494 4.033243 ACTTTGACCAAACGTTCGAGTAAC 59.967 41.667 0.00 0.00 34.52 2.50
494 495 4.183101 ACTTTGACCAAACGTTCGAGTAA 58.817 39.130 0.00 0.00 0.00 2.24
495 496 3.784338 ACTTTGACCAAACGTTCGAGTA 58.216 40.909 0.00 0.00 0.00 2.59
496 497 2.624636 ACTTTGACCAAACGTTCGAGT 58.375 42.857 0.00 0.00 0.00 4.18
497 498 3.668596 AACTTTGACCAAACGTTCGAG 57.331 42.857 0.00 0.00 0.00 4.04
498 499 3.001533 GCTAACTTTGACCAAACGTTCGA 59.998 43.478 0.00 0.00 0.00 3.71
499 500 3.285745 GCTAACTTTGACCAAACGTTCG 58.714 45.455 0.00 0.00 0.00 3.95
500 501 3.314357 AGGCTAACTTTGACCAAACGTTC 59.686 43.478 0.00 0.00 0.00 3.95
501 502 3.284617 AGGCTAACTTTGACCAAACGTT 58.715 40.909 0.00 0.00 0.00 3.99
502 503 2.876550 GAGGCTAACTTTGACCAAACGT 59.123 45.455 0.00 0.00 0.00 3.99
503 504 2.096417 CGAGGCTAACTTTGACCAAACG 60.096 50.000 0.00 0.00 0.00 3.60
504 505 3.135994 TCGAGGCTAACTTTGACCAAAC 58.864 45.455 0.00 0.00 0.00 2.93
505 506 3.478857 TCGAGGCTAACTTTGACCAAA 57.521 42.857 0.00 0.00 0.00 3.28
506 507 3.478857 TTCGAGGCTAACTTTGACCAA 57.521 42.857 0.00 0.00 0.00 3.67
507 508 3.478857 TTTCGAGGCTAACTTTGACCA 57.521 42.857 0.00 0.00 0.00 4.02
508 509 4.534168 GTTTTTCGAGGCTAACTTTGACC 58.466 43.478 0.00 0.00 0.00 4.02
509 510 4.209112 CGTTTTTCGAGGCTAACTTTGAC 58.791 43.478 0.00 0.00 42.86 3.18
510 511 3.303526 GCGTTTTTCGAGGCTAACTTTGA 60.304 43.478 0.00 0.00 42.86 2.69
511 512 2.971261 GCGTTTTTCGAGGCTAACTTTG 59.029 45.455 0.00 0.00 42.86 2.77
512 513 2.614983 TGCGTTTTTCGAGGCTAACTTT 59.385 40.909 0.00 0.00 42.86 2.66
513 514 2.215196 TGCGTTTTTCGAGGCTAACTT 58.785 42.857 0.00 0.00 42.86 2.66
514 515 1.873698 TGCGTTTTTCGAGGCTAACT 58.126 45.000 0.00 0.00 42.86 2.24
515 516 2.894307 ATGCGTTTTTCGAGGCTAAC 57.106 45.000 0.00 0.00 42.86 2.34
516 517 3.372822 CCTAATGCGTTTTTCGAGGCTAA 59.627 43.478 0.00 0.00 42.86 3.09
517 518 2.933906 CCTAATGCGTTTTTCGAGGCTA 59.066 45.455 0.00 0.00 42.86 3.93
518 519 1.737793 CCTAATGCGTTTTTCGAGGCT 59.262 47.619 0.00 0.00 42.86 4.58
519 520 1.794076 GCCTAATGCGTTTTTCGAGGC 60.794 52.381 12.47 12.47 44.30 4.70
520 521 1.202143 GGCCTAATGCGTTTTTCGAGG 60.202 52.381 0.00 0.00 42.61 4.63
521 522 1.202143 GGGCCTAATGCGTTTTTCGAG 60.202 52.381 0.84 0.00 42.61 4.04
522 523 0.806241 GGGCCTAATGCGTTTTTCGA 59.194 50.000 0.84 0.00 42.61 3.71
523 524 0.808755 AGGGCCTAATGCGTTTTTCG 59.191 50.000 2.82 0.00 42.61 3.46
524 525 5.959618 ATATAGGGCCTAATGCGTTTTTC 57.040 39.130 18.91 0.00 42.61 2.29
525 526 6.775708 TCTATATAGGGCCTAATGCGTTTTT 58.224 36.000 18.91 0.00 42.61 1.94
526 527 6.368779 TCTATATAGGGCCTAATGCGTTTT 57.631 37.500 18.91 0.30 42.61 2.43
527 528 6.349300 CATCTATATAGGGCCTAATGCGTTT 58.651 40.000 18.91 1.12 42.61 3.60
528 529 5.163301 CCATCTATATAGGGCCTAATGCGTT 60.163 44.000 18.91 1.94 42.61 4.84
529 530 4.345257 CCATCTATATAGGGCCTAATGCGT 59.655 45.833 18.91 2.76 42.61 5.24
530 531 4.588951 TCCATCTATATAGGGCCTAATGCG 59.411 45.833 18.91 10.04 42.61 4.73
531 532 6.327626 TCTTCCATCTATATAGGGCCTAATGC 59.672 42.308 18.91 0.00 40.16 3.56
532 533 7.921041 TCTTCCATCTATATAGGGCCTAATG 57.079 40.000 18.91 15.42 0.00 1.90
533 534 7.570607 CCTTCTTCCATCTATATAGGGCCTAAT 59.429 40.741 18.91 14.19 0.00 1.73
534 535 6.903534 CCTTCTTCCATCTATATAGGGCCTAA 59.096 42.308 18.91 7.61 0.00 2.69
535 536 6.444704 CCTTCTTCCATCTATATAGGGCCTA 58.555 44.000 17.16 17.16 0.00 3.93
536 537 5.284582 CCTTCTTCCATCTATATAGGGCCT 58.715 45.833 12.58 12.58 0.00 5.19
537 538 4.410555 CCCTTCTTCCATCTATATAGGGCC 59.589 50.000 9.89 0.00 35.11 5.80
538 539 5.281314 TCCCTTCTTCCATCTATATAGGGC 58.719 45.833 9.89 0.00 40.71 5.19
539 540 6.507568 ACTCCCTTCTTCCATCTATATAGGG 58.492 44.000 9.89 4.49 41.98 3.53
540 541 9.548631 TTTACTCCCTTCTTCCATCTATATAGG 57.451 37.037 9.89 0.00 0.00 2.57
544 545 9.225682 ACATTTTACTCCCTTCTTCCATCTATA 57.774 33.333 0.00 0.00 0.00 1.31
545 546 8.107196 ACATTTTACTCCCTTCTTCCATCTAT 57.893 34.615 0.00 0.00 0.00 1.98
546 547 7.510675 ACATTTTACTCCCTTCTTCCATCTA 57.489 36.000 0.00 0.00 0.00 1.98
547 548 6.394345 ACATTTTACTCCCTTCTTCCATCT 57.606 37.500 0.00 0.00 0.00 2.90
548 549 6.887002 AGAACATTTTACTCCCTTCTTCCATC 59.113 38.462 0.00 0.00 0.00 3.51
549 550 6.794534 AGAACATTTTACTCCCTTCTTCCAT 58.205 36.000 0.00 0.00 0.00 3.41
550 551 6.200878 AGAACATTTTACTCCCTTCTTCCA 57.799 37.500 0.00 0.00 0.00 3.53
551 552 5.648526 GGAGAACATTTTACTCCCTTCTTCC 59.351 44.000 0.00 0.00 42.84 3.46
552 553 6.745159 GGAGAACATTTTACTCCCTTCTTC 57.255 41.667 0.00 0.00 42.84 2.87
559 560 8.575649 TTTCTTATGGGAGAACATTTTACTCC 57.424 34.615 0.00 0.00 46.44 3.85
564 565 9.104713 AGGAAATTTCTTATGGGAGAACATTTT 57.895 29.630 17.42 0.00 35.50 1.82
565 566 8.670521 AGGAAATTTCTTATGGGAGAACATTT 57.329 30.769 17.42 0.00 35.50 2.32
566 567 7.895429 TGAGGAAATTTCTTATGGGAGAACATT 59.105 33.333 17.42 0.00 35.50 2.71
567 568 7.413446 TGAGGAAATTTCTTATGGGAGAACAT 58.587 34.615 17.42 0.00 35.50 2.71
568 569 6.789268 TGAGGAAATTTCTTATGGGAGAACA 58.211 36.000 17.42 0.00 35.50 3.18
569 570 7.888250 ATGAGGAAATTTCTTATGGGAGAAC 57.112 36.000 17.42 0.00 35.50 3.01
570 571 8.899887 AAATGAGGAAATTTCTTATGGGAGAA 57.100 30.769 17.42 0.00 34.00 2.87
571 572 8.752187 CAAAATGAGGAAATTTCTTATGGGAGA 58.248 33.333 17.42 0.00 0.00 3.71
572 573 8.534496 ACAAAATGAGGAAATTTCTTATGGGAG 58.466 33.333 17.42 6.00 0.00 4.30
573 574 8.434589 ACAAAATGAGGAAATTTCTTATGGGA 57.565 30.769 17.42 0.00 0.00 4.37
583 584 9.707957 TGGTGGTATATACAAAATGAGGAAATT 57.292 29.630 14.70 0.00 0.00 1.82
584 585 9.354673 CTGGTGGTATATACAAAATGAGGAAAT 57.645 33.333 14.70 0.00 0.00 2.17
585 586 8.553153 TCTGGTGGTATATACAAAATGAGGAAA 58.447 33.333 14.70 0.00 0.00 3.13
586 587 8.096621 TCTGGTGGTATATACAAAATGAGGAA 57.903 34.615 14.70 0.00 0.00 3.36
587 588 7.684317 TCTGGTGGTATATACAAAATGAGGA 57.316 36.000 14.70 0.42 0.00 3.71
588 589 8.924511 ATTCTGGTGGTATATACAAAATGAGG 57.075 34.615 14.70 0.00 0.00 3.86
620 621 8.627208 TCTTCATCTTTCTTACTCTGCATTTT 57.373 30.769 0.00 0.00 0.00 1.82
636 637 8.702438 CAACGCATTATTGTTTTTCTTCATCTT 58.298 29.630 0.00 0.00 0.00 2.40
662 663 0.597118 TTGCTGGTTTTGCATCGTGC 60.597 50.000 0.00 3.44 45.29 5.34
663 664 1.411394 CTTGCTGGTTTTGCATCGTG 58.589 50.000 0.00 0.00 40.34 4.35
664 665 0.314935 CCTTGCTGGTTTTGCATCGT 59.685 50.000 0.00 0.00 40.34 3.73
665 666 0.597568 TCCTTGCTGGTTTTGCATCG 59.402 50.000 0.00 0.00 40.34 3.84
701 704 8.582437 CCATCTCCATGCATTATTGATTAGTTT 58.418 33.333 0.00 0.00 0.00 2.66
798 963 3.888583 TGCATGGTGTATCATCACATGT 58.111 40.909 0.00 0.00 39.76 3.21
799 964 4.096682 TGTTGCATGGTGTATCATCACATG 59.903 41.667 0.00 0.00 39.76 3.21
800 965 4.271661 TGTTGCATGGTGTATCATCACAT 58.728 39.130 0.00 0.00 39.76 3.21
801 966 3.683802 TGTTGCATGGTGTATCATCACA 58.316 40.909 0.00 0.00 39.76 3.58
802 967 4.603985 CATGTTGCATGGTGTATCATCAC 58.396 43.478 0.00 0.00 37.57 3.06
803 968 3.067040 GCATGTTGCATGGTGTATCATCA 59.933 43.478 10.59 0.00 44.26 3.07
804 969 3.635331 GCATGTTGCATGGTGTATCATC 58.365 45.455 10.59 0.00 44.26 2.92
805 970 3.720949 GCATGTTGCATGGTGTATCAT 57.279 42.857 10.59 0.00 44.26 2.45
849 1014 3.128349 GAGAGTGAGGAGCGTAGAGTAG 58.872 54.545 0.00 0.00 0.00 2.57
850 1015 2.500504 TGAGAGTGAGGAGCGTAGAGTA 59.499 50.000 0.00 0.00 0.00 2.59
851 1016 1.279558 TGAGAGTGAGGAGCGTAGAGT 59.720 52.381 0.00 0.00 0.00 3.24
852 1017 1.939934 CTGAGAGTGAGGAGCGTAGAG 59.060 57.143 0.00 0.00 0.00 2.43
853 1018 2.014574 GCTGAGAGTGAGGAGCGTAGA 61.015 57.143 0.00 0.00 0.00 2.59
876 1041 2.698763 GCTGCCAAGAAGCTGAGCC 61.699 63.158 0.00 0.00 37.69 4.70
884 1049 5.707298 GCATCTATTTATAGGCTGCCAAGAA 59.293 40.000 22.65 10.11 35.40 2.52
906 1071 1.527034 GGATGAGTTGCACAAGAGCA 58.473 50.000 0.00 0.00 43.99 4.26
924 1089 2.484287 AAAGAGGATGGGTGTGCCGG 62.484 60.000 0.00 0.00 34.97 6.13
941 1106 4.771577 AGATCTCTCTCTGTGCTTCTGAAA 59.228 41.667 0.00 0.00 0.00 2.69
975 1140 1.354337 CTGGATCGACGGCAACAGTG 61.354 60.000 0.00 0.00 0.00 3.66
996 1161 1.404047 GCCAGTATGCCGCACATTTTT 60.404 47.619 0.00 0.00 40.38 1.94
1032 1197 1.221840 CTTCCCCTGGGTGTCATCG 59.778 63.158 12.71 0.00 36.47 3.84
1122 1287 2.409651 GAGAGGTAGCAGTCGCCG 59.590 66.667 0.00 0.00 39.83 6.46
1218 1383 3.833545 ACACACAAAAGCAAACGTACA 57.166 38.095 0.00 0.00 0.00 2.90
1227 1392 4.260375 CGGCAGAGATATACACACAAAAGC 60.260 45.833 0.00 0.00 0.00 3.51
1437 1603 6.465084 ACTAGTAATTGTTGTTGAGGAGGAC 58.535 40.000 0.00 0.00 0.00 3.85
1469 1635 7.334858 TGGCGCACCATATATCTTATAAATGA 58.665 34.615 10.83 0.00 42.67 2.57
1501 1667 9.619316 GACATGTGATAGATATGTTAGTGTCTC 57.381 37.037 1.15 0.00 36.59 3.36
1537 1703 0.764890 TGTCTTTCCCACACCAGAGG 59.235 55.000 0.00 0.00 0.00 3.69
1542 1708 1.892209 ATTCGTGTCTTTCCCACACC 58.108 50.000 0.00 0.00 41.04 4.16
1546 1712 3.181453 TGGTGTTATTCGTGTCTTTCCCA 60.181 43.478 0.00 0.00 0.00 4.37
1581 1747 6.515200 CCCTCGTGAAAGGACTACATATGTAG 60.515 46.154 32.20 32.20 42.08 2.74
1583 1749 4.099573 CCCTCGTGAAAGGACTACATATGT 59.900 45.833 13.93 13.93 38.87 2.29
1587 1753 2.496470 GTCCCTCGTGAAAGGACTACAT 59.504 50.000 10.15 0.00 45.49 2.29
1601 1767 0.389426 CTGTTTACGGTGGTCCCTCG 60.389 60.000 0.00 0.14 0.00 4.63
1629 1795 3.116300 CTCGTTTATCGGTGACATGGAG 58.884 50.000 0.00 0.00 40.32 3.86
1671 1837 8.255206 ACTTGTCAATCACGTATATTTCCAGTA 58.745 33.333 0.00 0.00 0.00 2.74
1683 1849 1.806542 GCATCCACTTGTCAATCACGT 59.193 47.619 0.00 0.00 0.00 4.49
1684 1850 1.805943 TGCATCCACTTGTCAATCACG 59.194 47.619 0.00 0.00 0.00 4.35
1740 1906 0.530744 TGTCGATGAAGTTCTCCCCG 59.469 55.000 4.17 2.93 0.00 5.73
1794 1960 1.083401 GAAGCTGTTGTCGCGTGTG 60.083 57.895 5.77 0.00 0.00 3.82
1848 2014 4.463891 CCATCAATTCCCCAGCCAATATAC 59.536 45.833 0.00 0.00 0.00 1.47
1883 2049 9.952188 TCGTGTCACATTGTTGAATAAAATTTA 57.048 25.926 3.42 0.00 0.00 1.40
1884 2050 8.864069 TCGTGTCACATTGTTGAATAAAATTT 57.136 26.923 3.42 0.00 0.00 1.82
1885 2051 8.914654 CATCGTGTCACATTGTTGAATAAAATT 58.085 29.630 3.42 0.00 0.00 1.82
1886 2052 7.062138 GCATCGTGTCACATTGTTGAATAAAAT 59.938 33.333 3.42 0.00 0.00 1.82
1887 2053 6.362016 GCATCGTGTCACATTGTTGAATAAAA 59.638 34.615 3.42 0.00 0.00 1.52
1888 2054 5.855925 GCATCGTGTCACATTGTTGAATAAA 59.144 36.000 3.42 0.00 0.00 1.40
1889 2055 5.389778 GCATCGTGTCACATTGTTGAATAA 58.610 37.500 3.42 0.00 0.00 1.40
1890 2056 4.142708 GGCATCGTGTCACATTGTTGAATA 60.143 41.667 3.42 0.00 0.00 1.75
1891 2057 3.366273 GGCATCGTGTCACATTGTTGAAT 60.366 43.478 3.42 0.00 0.00 2.57
1892 2058 2.031245 GGCATCGTGTCACATTGTTGAA 60.031 45.455 3.42 0.00 0.00 2.69
1893 2059 1.535028 GGCATCGTGTCACATTGTTGA 59.465 47.619 3.42 0.00 0.00 3.18
1894 2060 1.536766 AGGCATCGTGTCACATTGTTG 59.463 47.619 3.42 0.00 0.00 3.33
1895 2061 1.536766 CAGGCATCGTGTCACATTGTT 59.463 47.619 3.42 0.00 0.00 2.83
1896 2062 1.159285 CAGGCATCGTGTCACATTGT 58.841 50.000 3.42 0.00 0.00 2.71
1897 2063 0.179181 GCAGGCATCGTGTCACATTG 60.179 55.000 3.42 0.94 0.00 2.82
1898 2064 1.308069 GGCAGGCATCGTGTCACATT 61.308 55.000 3.42 0.00 0.00 2.71
1899 2065 1.746615 GGCAGGCATCGTGTCACAT 60.747 57.895 3.42 0.00 0.00 3.21
1900 2066 2.358615 GGCAGGCATCGTGTCACA 60.359 61.111 3.42 0.00 0.00 3.58
1901 2067 3.127533 GGGCAGGCATCGTGTCAC 61.128 66.667 0.00 0.00 0.00 3.67
1902 2068 3.315142 GAGGGCAGGCATCGTGTCA 62.315 63.158 0.00 0.00 0.00 3.58
1903 2069 2.512515 GAGGGCAGGCATCGTGTC 60.513 66.667 0.00 0.00 0.00 3.67
1904 2070 3.320879 CTGAGGGCAGGCATCGTGT 62.321 63.158 3.97 0.00 38.51 4.49
1905 2071 2.513204 CTGAGGGCAGGCATCGTG 60.513 66.667 3.97 0.00 38.51 4.35
1906 2072 2.685017 TCTGAGGGCAGGCATCGT 60.685 61.111 3.97 0.00 42.53 3.73
1911 2077 0.034670 AAGATTGTCTGAGGGCAGGC 60.035 55.000 0.00 0.00 46.90 4.85
1973 2139 5.423015 ACATGAGCAGGTAATGTTAGACAG 58.577 41.667 0.00 0.00 30.41 3.51
2172 2338 0.979665 CCTTCCTGAGAGCAAGTGGA 59.020 55.000 0.00 0.00 0.00 4.02
2342 2508 2.089980 GCTGCAACCAATGATGAGTCT 58.910 47.619 0.00 0.00 0.00 3.24
2423 2589 3.625764 CCTCAAGTCCGACACAAAAAGAA 59.374 43.478 0.40 0.00 0.00 2.52
2545 2728 1.463674 AATTGGCTACCTCCTTTGCG 58.536 50.000 0.00 0.00 0.00 4.85
2572 2755 1.470098 GTGAACTCATGGTGCATGGTC 59.530 52.381 0.00 0.00 41.66 4.02
2624 2807 1.202110 GGTCAACAGATGAAGCATGCG 60.202 52.381 13.01 0.00 40.50 4.73
3058 3272 5.587844 CCTCATTGATAAACTCCTTGTCCAG 59.412 44.000 0.00 0.00 0.00 3.86
3146 3360 8.461222 CAACAATATGGTATGCTCTTTCTCAAA 58.539 33.333 0.00 0.00 0.00 2.69
3232 3462 5.768980 TCTCAATTCTTCCAAGATCAGGT 57.231 39.130 0.00 0.00 34.49 4.00
3256 3486 1.228245 TGCTTTCCTCAGCACCCAC 60.228 57.895 0.00 0.00 45.14 4.61
3513 3744 7.477422 CACTACAATTTTACGCATAACAGTGAC 59.523 37.037 0.00 0.00 0.00 3.67
3602 3845 7.191551 ACTTTGCATTTGACATCATCTTATCG 58.808 34.615 0.00 0.00 0.00 2.92
3638 3881 0.533308 TTGTAGTCGGGGTGTTGTGC 60.533 55.000 0.00 0.00 0.00 4.57
3784 4027 0.040958 GTTCTGGCACAAGAGCAACG 60.041 55.000 0.00 0.00 38.70 4.10
3854 4097 0.541863 CATCCCACTCTACCGCCTTT 59.458 55.000 0.00 0.00 0.00 3.11
3875 4118 2.203182 AGGTTCCCCGACCACTGA 59.797 61.111 0.00 0.00 42.35 3.41
3966 4209 2.575532 CTTCTTGCTGGTTCCTGTCAA 58.424 47.619 0.00 2.84 0.00 3.18
3969 4212 0.538287 GGCTTCTTGCTGGTTCCTGT 60.538 55.000 0.00 0.00 42.39 4.00
4141 4384 9.482627 GTCTCCGATTTCATAAGAACAATAGAT 57.517 33.333 0.00 0.00 32.39 1.98
4359 4602 2.614134 AGGCTACTCCTCTGTTCAGT 57.386 50.000 0.00 0.00 43.20 3.41
4369 4612 6.323225 TGTTCTAAATGTAGGTAGGCTACTCC 59.677 42.308 23.01 8.77 0.00 3.85
4409 4652 7.775120 ACTCACTGTTCAATTCAACATCTTTT 58.225 30.769 0.00 0.00 35.70 2.27
4485 4732 7.511959 AAGTTTTGTTGGAGAAGGATTAGAC 57.488 36.000 0.00 0.00 0.00 2.59
4563 4810 2.746362 CAATTCTCCTCACAGAACCTGC 59.254 50.000 0.00 0.00 35.18 4.85
4613 4860 3.944650 ACATACACATAAAGGCGCATTCA 59.055 39.130 8.15 0.00 0.00 2.57
4652 4899 9.889128 TTTTGGAGAAAGAAGATGTCAATTTTT 57.111 25.926 0.00 0.00 0.00 1.94
4658 4905 8.621286 GTTTACTTTTGGAGAAAGAAGATGTCA 58.379 33.333 5.60 0.00 0.00 3.58
4750 4997 1.047801 GACTGGGGGCAAAATGTTGT 58.952 50.000 0.00 0.00 37.06 3.32
4751 4998 1.047002 TGACTGGGGGCAAAATGTTG 58.953 50.000 0.00 0.00 37.83 3.33
4752 4999 1.799933 TTGACTGGGGGCAAAATGTT 58.200 45.000 0.00 0.00 0.00 2.71
4753 5000 2.028561 ATTGACTGGGGGCAAAATGT 57.971 45.000 0.00 0.00 0.00 2.71
4754 5001 2.568509 AGAATTGACTGGGGGCAAAATG 59.431 45.455 0.00 0.00 0.00 2.32
4921 5168 6.480651 TGAACTTTTGCAACTTCGTCTACATA 59.519 34.615 0.00 0.00 0.00 2.29
4924 5171 5.151632 TGAACTTTTGCAACTTCGTCTAC 57.848 39.130 0.00 0.00 0.00 2.59
4948 5195 6.324819 ACCTGCAATAATTTCATGTTCGAAG 58.675 36.000 0.00 0.00 0.00 3.79
4999 5246 8.521170 TGGTCCCTACTAGATATAATGATTCG 57.479 38.462 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.