Multiple sequence alignment - TraesCS5A01G151800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G151800 chr5A 100.000 5254 0 0 1 5254 328945292 328940039 0.000000e+00 9703.0
1 TraesCS5A01G151800 chr5A 100.000 210 0 0 5482 5691 328939811 328939602 6.910000e-104 388.0
2 TraesCS5A01G151800 chr5B 96.811 2603 72 8 2651 5246 278226994 278224396 0.000000e+00 4337.0
3 TraesCS5A01G151800 chr5B 92.591 2416 113 25 1 2386 278229372 278226993 0.000000e+00 3410.0
4 TraesCS5A01G151800 chr5D 96.907 2134 62 4 3077 5208 244703207 244701076 0.000000e+00 3572.0
5 TraesCS5A01G151800 chr5D 94.241 1667 53 15 749 2386 244705314 244703662 0.000000e+00 2507.0
6 TraesCS5A01G151800 chr5D 96.847 444 10 3 2650 3091 244703664 244703223 0.000000e+00 739.0
7 TraesCS5A01G151800 chr5D 91.772 474 31 4 324 795 244705777 244705310 0.000000e+00 652.0
8 TraesCS5A01G151800 chr5D 92.508 307 22 1 1 306 244706142 244705836 6.770000e-119 438.0
9 TraesCS5A01G151800 chr7A 96.642 268 8 1 2386 2653 729574119 729573853 1.450000e-120 444.0
10 TraesCS5A01G151800 chr7A 92.021 188 10 5 5507 5691 20455453 20455638 5.660000e-65 259.0
11 TraesCS5A01G151800 chr7A 100.000 29 0 0 5503 5531 39061955 39061927 3.000000e-03 54.7
12 TraesCS5A01G151800 chr3D 96.283 269 9 1 2384 2652 109257942 109257675 1.880000e-119 440.0
13 TraesCS5A01G151800 chr3B 95.636 275 11 1 2381 2655 735258172 735258445 1.880000e-119 440.0
14 TraesCS5A01G151800 chr3A 96.604 265 8 1 2386 2650 352500928 352501191 6.770000e-119 438.0
15 TraesCS5A01G151800 chr7B 95.926 270 9 2 2383 2652 388900180 388900447 2.430000e-118 436.0
16 TraesCS5A01G151800 chr1A 95.911 269 10 1 2384 2652 56885701 56885434 8.760000e-118 435.0
17 TraesCS5A01G151800 chr6A 95.221 272 11 2 2383 2653 57666296 57666566 4.070000e-116 429.0
18 TraesCS5A01G151800 chr2A 95.221 272 12 1 2383 2654 16797098 16797368 4.070000e-116 429.0
19 TraesCS5A01G151800 chr1B 95.539 269 10 2 2384 2652 566362712 566362446 4.070000e-116 429.0
20 TraesCS5A01G151800 chr7D 91.753 194 11 5 5501 5691 625171999 625171808 1.220000e-66 265.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G151800 chr5A 328939602 328945292 5690 True 5045.5 9703 100.000 1 5691 2 chr5A.!!$R1 5690
1 TraesCS5A01G151800 chr5B 278224396 278229372 4976 True 3873.5 4337 94.701 1 5246 2 chr5B.!!$R1 5245
2 TraesCS5A01G151800 chr5D 244701076 244706142 5066 True 1581.6 3572 94.455 1 5208 5 chr5D.!!$R1 5207

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
103 104 0.174389 TCTCCTGCTCATCACGCTTC 59.826 55.0 0.00 0.0 0.00 3.86 F
1413 1513 0.038599 TCTTGCCATCCTGCACACAT 59.961 50.0 0.00 0.0 41.88 3.21 F
1765 1891 0.663153 GTTCAACCGAACTTGCTGCT 59.337 50.0 0.00 0.0 46.72 4.24 F
2403 2529 0.253160 AAGGCTGGTCATAGTGGGGA 60.253 55.0 0.00 0.0 0.00 4.81 F
3277 3437 0.179073 CATTGGTGTCCCCTAGCTCG 60.179 60.0 0.00 0.0 0.00 5.03 F
3305 3465 0.538977 GTCATCTGCATCCATGGGGG 60.539 60.0 13.02 5.5 38.37 5.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1415 1515 1.270732 CCATAGTCCAGAGGCATCAGC 60.271 57.143 0.0 0.0 41.1 4.26 R
2384 2510 0.253160 TCCCCACTATGACCAGCCTT 60.253 55.000 0.0 0.0 0.0 4.35 R
2645 2771 1.141053 CAGGGGCGATTTAGTTAGGCT 59.859 52.381 0.0 0.0 0.0 4.58 R
4321 4481 2.680339 GGGAATAGAGTGCAAACAGAGC 59.320 50.000 0.0 0.0 0.0 4.09 R
4624 4784 1.285078 GGTCCACCTTTGCTCCCTAAT 59.715 52.381 0.0 0.0 0.0 1.73 R
4969 5130 3.845178 TGCTTCTACGGTTACACATCAG 58.155 45.455 0.0 0.0 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 104 0.174389 TCTCCTGCTCATCACGCTTC 59.826 55.000 0.00 0.00 0.00 3.86
223 224 7.435068 AGTAAACAGAAAGCATCATTAACGT 57.565 32.000 0.00 0.00 0.00 3.99
239 240 2.392933 ACGTTGTTATGCACCAAACG 57.607 45.000 18.58 18.58 0.00 3.60
241 242 2.355132 ACGTTGTTATGCACCAAACGAA 59.645 40.909 24.00 9.51 0.00 3.85
267 268 7.707893 ACCAAAGAACTTGACAAAATGAATGAG 59.292 33.333 0.00 0.00 37.17 2.90
315 365 5.163591 GGCACCTAAAAGTACAAGTTTGTGT 60.164 40.000 7.73 0.00 42.31 3.72
321 371 9.498307 CCTAAAAGTACAAGTTTGTGTTGTTAG 57.502 33.333 7.73 9.47 42.31 2.34
324 374 8.736751 AAAGTACAAGTTTGTGTTGTTAGTTG 57.263 30.769 7.73 0.00 42.31 3.16
326 376 7.878036 AGTACAAGTTTGTGTTGTTAGTTGTT 58.122 30.769 7.73 0.00 42.31 2.83
327 377 9.001542 AGTACAAGTTTGTGTTGTTAGTTGTTA 57.998 29.630 7.73 0.00 42.31 2.41
328 378 9.054191 GTACAAGTTTGTGTTGTTAGTTGTTAC 57.946 33.333 7.73 0.00 42.31 2.50
329 379 7.649973 ACAAGTTTGTGTTGTTAGTTGTTACA 58.350 30.769 0.00 0.00 40.49 2.41
330 380 7.806014 ACAAGTTTGTGTTGTTAGTTGTTACAG 59.194 33.333 0.00 0.00 40.49 2.74
331 381 7.675962 AGTTTGTGTTGTTAGTTGTTACAGA 57.324 32.000 0.00 0.00 0.00 3.41
332 382 8.276252 AGTTTGTGTTGTTAGTTGTTACAGAT 57.724 30.769 0.00 0.00 0.00 2.90
333 383 8.181573 AGTTTGTGTTGTTAGTTGTTACAGATG 58.818 33.333 0.00 0.00 0.00 2.90
334 384 6.612247 TGTGTTGTTAGTTGTTACAGATGG 57.388 37.500 0.00 0.00 0.00 3.51
335 385 6.350103 TGTGTTGTTAGTTGTTACAGATGGA 58.650 36.000 0.00 0.00 0.00 3.41
338 388 8.349983 GTGTTGTTAGTTGTTACAGATGGAAAT 58.650 33.333 0.00 0.00 0.00 2.17
351 401 9.699410 TTACAGATGGAAATATTTCTTCACCAT 57.301 29.630 23.85 19.16 39.00 3.55
359 409 7.976175 GGAAATATTTCTTCACCATTCCAGTTC 59.024 37.037 23.85 1.78 37.35 3.01
387 437 3.162394 AGGAGGGGATGCTGAGATC 57.838 57.895 0.00 0.00 0.00 2.75
390 440 0.975887 GAGGGGATGCTGAGATCCTC 59.024 60.000 9.66 6.75 42.75 3.71
416 466 2.196742 TGATGTCTAGAGGCCCCATT 57.803 50.000 0.00 0.00 0.00 3.16
456 506 5.048224 ACTGACAACTTAACGCTAGAGCTAA 60.048 40.000 0.00 0.00 39.32 3.09
462 512 6.506500 ACTTAACGCTAGAGCTAAGTGTAA 57.493 37.500 17.97 8.57 39.21 2.41
506 556 4.582459 GCGCAGAGATGAAATTTGTCTAC 58.418 43.478 0.30 0.00 0.00 2.59
531 581 5.057149 GTGCATCTACCCTAACGATTTCAT 58.943 41.667 0.00 0.00 0.00 2.57
532 582 5.527582 GTGCATCTACCCTAACGATTTCATT 59.472 40.000 0.00 0.00 0.00 2.57
533 583 6.038271 GTGCATCTACCCTAACGATTTCATTT 59.962 38.462 0.00 0.00 0.00 2.32
534 584 6.038161 TGCATCTACCCTAACGATTTCATTTG 59.962 38.462 0.00 0.00 0.00 2.32
535 585 6.260050 GCATCTACCCTAACGATTTCATTTGA 59.740 38.462 0.00 0.00 0.00 2.69
543 593 5.957842 AACGATTTCATTTGAACCAGCTA 57.042 34.783 0.00 0.00 33.13 3.32
551 601 9.643693 ATTTCATTTGAACCAGCTAATTACAAG 57.356 29.630 0.00 0.00 33.13 3.16
574 624 3.019564 GGTTGGATGTTGAATGGAGGAG 58.980 50.000 0.00 0.00 0.00 3.69
736 786 2.061773 CCGATCAGCCGTACATCAATC 58.938 52.381 0.00 0.00 0.00 2.67
737 787 2.545742 CCGATCAGCCGTACATCAATCA 60.546 50.000 0.00 0.00 0.00 2.57
743 793 4.571984 TCAGCCGTACATCAATCAAATGAG 59.428 41.667 0.00 0.00 31.76 2.90
782 876 1.181786 CCTGTCAGGAGTCAGAGGAC 58.818 60.000 14.26 0.00 44.66 3.85
824 921 4.144727 GGCGGAGGAGGAGGAGGA 62.145 72.222 0.00 0.00 0.00 3.71
825 922 2.520741 GCGGAGGAGGAGGAGGAG 60.521 72.222 0.00 0.00 0.00 3.69
826 923 2.197324 CGGAGGAGGAGGAGGAGG 59.803 72.222 0.00 0.00 0.00 4.30
827 924 2.387772 CGGAGGAGGAGGAGGAGGA 61.388 68.421 0.00 0.00 0.00 3.71
831 928 0.699577 AGGAGGAGGAGGAGGATCGA 60.700 60.000 0.00 0.00 34.37 3.59
845 942 3.749064 TCGAGGCACGAGCTGACC 61.749 66.667 2.07 0.00 46.45 4.02
847 944 4.803426 GAGGCACGAGCTGACCGG 62.803 72.222 0.00 0.00 41.70 5.28
921 1018 1.960417 CCCAACAAAACCGGCAAATT 58.040 45.000 0.00 0.00 0.00 1.82
969 1066 2.211410 CCGTACTCCCACCCACACA 61.211 63.158 0.00 0.00 0.00 3.72
1203 1300 3.387947 GAGGACGCTTCCCGGGAA 61.388 66.667 33.52 33.52 44.10 3.97
1206 1303 2.585247 GACGCTTCCCGGGAATCG 60.585 66.667 42.62 42.62 45.50 3.34
1248 1348 2.907897 AAGCTATGACTGCGACGGGC 62.908 60.000 0.00 0.00 43.96 6.13
1413 1513 0.038599 TCTTGCCATCCTGCACACAT 59.961 50.000 0.00 0.00 41.88 3.21
1415 1515 1.252215 TTGCCATCCTGCACACATGG 61.252 55.000 8.81 8.81 41.88 3.66
1417 1517 1.379443 CCATCCTGCACACATGGCT 60.379 57.895 0.00 0.00 30.94 4.75
1506 1606 7.370383 AGCAACTTAACCAACAATATTCACAG 58.630 34.615 0.00 0.00 0.00 3.66
1516 1616 8.320617 ACCAACAATATTCACAGCCAAATTATT 58.679 29.630 0.00 0.00 0.00 1.40
1560 1660 1.342174 CAGCATTGCAACCCAGAAACT 59.658 47.619 11.91 0.00 0.00 2.66
1561 1661 2.557924 CAGCATTGCAACCCAGAAACTA 59.442 45.455 11.91 0.00 0.00 2.24
1594 1694 4.946784 GCTAGAAATTTCGAGCCTTTGA 57.053 40.909 31.59 4.91 46.14 2.69
1635 1735 5.538118 TCTGCAGAAGTTTCTCGAATGTAA 58.462 37.500 15.67 0.00 34.74 2.41
1636 1736 6.166279 TCTGCAGAAGTTTCTCGAATGTAAT 58.834 36.000 15.67 0.00 34.74 1.89
1637 1737 6.311445 TCTGCAGAAGTTTCTCGAATGTAATC 59.689 38.462 15.67 0.00 34.74 1.75
1707 1833 5.754543 ATTTACGTTTTGAACCGGAAAGA 57.245 34.783 9.46 0.00 39.96 2.52
1717 1843 3.756434 TGAACCGGAAAGATTGTTGATCC 59.244 43.478 9.46 0.00 35.21 3.36
1765 1891 0.663153 GTTCAACCGAACTTGCTGCT 59.337 50.000 0.00 0.00 46.72 4.24
1813 1939 9.535878 TTCAATTTGGTGTCCAAGTTATTTAAC 57.464 29.630 8.50 0.00 44.84 2.01
2214 2340 3.674753 GCGCTCAATTTGTTATGTGCTTT 59.325 39.130 0.00 0.00 34.74 3.51
2390 2516 9.817809 TTGAATTAACTGTAGTCTATAAGGCTG 57.182 33.333 0.00 0.00 29.80 4.85
2391 2517 8.421784 TGAATTAACTGTAGTCTATAAGGCTGG 58.578 37.037 0.00 0.00 29.80 4.85
2392 2518 7.916077 ATTAACTGTAGTCTATAAGGCTGGT 57.084 36.000 0.00 0.00 29.80 4.00
2393 2519 5.855740 AACTGTAGTCTATAAGGCTGGTC 57.144 43.478 0.00 0.00 29.80 4.02
2394 2520 4.868268 ACTGTAGTCTATAAGGCTGGTCA 58.132 43.478 0.00 0.00 29.80 4.02
2395 2521 5.459505 ACTGTAGTCTATAAGGCTGGTCAT 58.540 41.667 0.00 0.00 29.80 3.06
2396 2522 6.611785 ACTGTAGTCTATAAGGCTGGTCATA 58.388 40.000 0.00 0.00 29.80 2.15
2397 2523 6.717540 ACTGTAGTCTATAAGGCTGGTCATAG 59.282 42.308 0.00 0.00 29.80 2.23
2398 2524 6.611785 TGTAGTCTATAAGGCTGGTCATAGT 58.388 40.000 0.00 0.00 29.80 2.12
2399 2525 6.490381 TGTAGTCTATAAGGCTGGTCATAGTG 59.510 42.308 0.00 0.00 29.80 2.74
2400 2526 4.835615 AGTCTATAAGGCTGGTCATAGTGG 59.164 45.833 0.00 0.00 0.00 4.00
2401 2527 4.021016 GTCTATAAGGCTGGTCATAGTGGG 60.021 50.000 0.00 0.00 0.00 4.61
2402 2528 1.507140 TAAGGCTGGTCATAGTGGGG 58.493 55.000 0.00 0.00 0.00 4.96
2403 2529 0.253160 AAGGCTGGTCATAGTGGGGA 60.253 55.000 0.00 0.00 0.00 4.81
2404 2530 0.692419 AGGCTGGTCATAGTGGGGAG 60.692 60.000 0.00 0.00 0.00 4.30
2405 2531 0.983378 GGCTGGTCATAGTGGGGAGT 60.983 60.000 0.00 0.00 0.00 3.85
2406 2532 1.691482 GGCTGGTCATAGTGGGGAGTA 60.691 57.143 0.00 0.00 0.00 2.59
2407 2533 2.116238 GCTGGTCATAGTGGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
2408 2534 2.158943 GCTGGTCATAGTGGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
2409 2535 3.375699 CTGGTCATAGTGGGGAGTAACT 58.624 50.000 0.00 0.00 0.00 2.24
2410 2536 3.775316 CTGGTCATAGTGGGGAGTAACTT 59.225 47.826 0.00 0.00 0.00 2.66
2411 2537 4.950361 TGGTCATAGTGGGGAGTAACTTA 58.050 43.478 0.00 0.00 0.00 2.24
2412 2538 5.535029 TGGTCATAGTGGGGAGTAACTTAT 58.465 41.667 0.00 0.00 0.00 1.73
2413 2539 6.685541 TGGTCATAGTGGGGAGTAACTTATA 58.314 40.000 0.00 0.00 0.00 0.98
2414 2540 6.552350 TGGTCATAGTGGGGAGTAACTTATAC 59.448 42.308 0.00 0.00 0.00 1.47
2415 2541 6.781507 GGTCATAGTGGGGAGTAACTTATACT 59.218 42.308 0.00 0.00 0.00 2.12
2416 2542 7.946776 GGTCATAGTGGGGAGTAACTTATACTA 59.053 40.741 0.00 0.00 0.00 1.82
2417 2543 9.012161 GTCATAGTGGGGAGTAACTTATACTAG 57.988 40.741 0.00 0.00 0.00 2.57
2418 2544 8.730948 TCATAGTGGGGAGTAACTTATACTAGT 58.269 37.037 0.00 0.00 0.00 2.57
2419 2545 8.794553 CATAGTGGGGAGTAACTTATACTAGTG 58.205 40.741 5.39 0.00 0.00 2.74
2420 2546 6.739664 AGTGGGGAGTAACTTATACTAGTGT 58.260 40.000 5.39 0.39 0.00 3.55
2421 2547 6.832900 AGTGGGGAGTAACTTATACTAGTGTC 59.167 42.308 5.39 0.00 0.00 3.67
2422 2548 6.604795 GTGGGGAGTAACTTATACTAGTGTCA 59.395 42.308 5.39 0.00 0.00 3.58
2423 2549 7.287235 GTGGGGAGTAACTTATACTAGTGTCAT 59.713 40.741 5.39 0.00 0.00 3.06
2424 2550 8.505246 TGGGGAGTAACTTATACTAGTGTCATA 58.495 37.037 5.39 0.00 0.00 2.15
2425 2551 8.791675 GGGGAGTAACTTATACTAGTGTCATAC 58.208 40.741 5.39 1.96 0.00 2.39
2426 2552 9.347240 GGGAGTAACTTATACTAGTGTCATACA 57.653 37.037 5.39 0.00 0.00 2.29
2456 2582 9.524496 TGACACTAGTCTAAATTACTACCTTCA 57.476 33.333 0.00 0.00 45.20 3.02
2471 2597 9.727859 TTACTACCTTCATAATGCAAAGTAACA 57.272 29.630 0.00 0.00 0.00 2.41
2472 2598 8.807948 ACTACCTTCATAATGCAAAGTAACAT 57.192 30.769 0.00 0.00 0.00 2.71
2473 2599 9.899661 ACTACCTTCATAATGCAAAGTAACATA 57.100 29.630 0.00 0.00 0.00 2.29
2475 2601 8.807948 ACCTTCATAATGCAAAGTAACATAGT 57.192 30.769 0.00 0.00 0.00 2.12
2476 2602 9.899661 ACCTTCATAATGCAAAGTAACATAGTA 57.100 29.630 0.00 0.00 0.00 1.82
2484 2610 8.928270 ATGCAAAGTAACATAGTAGTAGTGTC 57.072 34.615 0.00 0.00 0.00 3.67
2485 2611 7.888424 TGCAAAGTAACATAGTAGTAGTGTCA 58.112 34.615 0.00 0.00 0.00 3.58
2486 2612 8.528643 TGCAAAGTAACATAGTAGTAGTGTCAT 58.471 33.333 0.00 0.00 0.00 3.06
2494 2620 9.908747 AACATAGTAGTAGTGTCATAGAAGACT 57.091 33.333 0.00 0.00 39.27 3.24
2495 2621 9.908747 ACATAGTAGTAGTGTCATAGAAGACTT 57.091 33.333 0.00 0.00 39.27 3.01
2499 2625 9.469097 AGTAGTAGTGTCATAGAAGACTTCATT 57.531 33.333 17.34 1.25 39.27 2.57
2516 2642 9.810545 AGACTTCATTAATTAGCTTGTAGACTC 57.189 33.333 0.00 0.00 0.00 3.36
2517 2643 9.587772 GACTTCATTAATTAGCTTGTAGACTCA 57.412 33.333 0.00 0.00 0.00 3.41
2524 2650 9.587772 TTAATTAGCTTGTAGACTCATCTTGTC 57.412 33.333 0.00 0.00 36.29 3.18
2525 2651 6.842437 TTAGCTTGTAGACTCATCTTGTCT 57.158 37.500 0.00 0.00 45.48 3.41
2526 2652 5.736951 AGCTTGTAGACTCATCTTGTCTT 57.263 39.130 1.67 0.00 41.45 3.01
2527 2653 5.477510 AGCTTGTAGACTCATCTTGTCTTG 58.522 41.667 1.67 0.00 41.45 3.02
2528 2654 5.244851 AGCTTGTAGACTCATCTTGTCTTGA 59.755 40.000 1.67 0.00 41.45 3.02
2529 2655 5.928839 GCTTGTAGACTCATCTTGTCTTGAA 59.071 40.000 1.67 0.00 41.45 2.69
2530 2656 6.425114 GCTTGTAGACTCATCTTGTCTTGAAA 59.575 38.462 1.67 0.00 41.45 2.69
2531 2657 7.041780 GCTTGTAGACTCATCTTGTCTTGAAAA 60.042 37.037 1.67 0.00 41.45 2.29
2532 2658 7.953158 TGTAGACTCATCTTGTCTTGAAAAG 57.047 36.000 1.67 0.00 41.45 2.27
2533 2659 5.938438 AGACTCATCTTGTCTTGAAAAGC 57.062 39.130 0.00 0.00 45.70 3.51
2534 2660 4.450419 AGACTCATCTTGTCTTGAAAAGCG 59.550 41.667 0.00 0.00 45.70 4.68
2535 2661 3.058639 ACTCATCTTGTCTTGAAAAGCGC 60.059 43.478 0.00 0.00 45.70 5.92
2536 2662 3.141398 TCATCTTGTCTTGAAAAGCGCT 58.859 40.909 2.64 2.64 45.70 5.92
2537 2663 4.314961 TCATCTTGTCTTGAAAAGCGCTA 58.685 39.130 12.05 0.00 45.70 4.26
2538 2664 4.937620 TCATCTTGTCTTGAAAAGCGCTAT 59.062 37.500 12.05 1.76 45.70 2.97
2539 2665 4.668576 TCTTGTCTTGAAAAGCGCTATG 57.331 40.909 12.05 0.00 45.70 2.23
2540 2666 4.065088 TCTTGTCTTGAAAAGCGCTATGT 58.935 39.130 12.05 0.00 45.70 2.29
2541 2667 4.515191 TCTTGTCTTGAAAAGCGCTATGTT 59.485 37.500 12.05 5.31 45.70 2.71
2542 2668 5.699001 TCTTGTCTTGAAAAGCGCTATGTTA 59.301 36.000 12.05 0.00 45.70 2.41
2543 2669 5.277601 TGTCTTGAAAAGCGCTATGTTAC 57.722 39.130 12.05 4.27 45.70 2.50
2544 2670 4.752604 TGTCTTGAAAAGCGCTATGTTACA 59.247 37.500 12.05 7.09 45.70 2.41
2545 2671 5.107104 TGTCTTGAAAAGCGCTATGTTACAG 60.107 40.000 12.05 5.30 45.70 2.74
2546 2672 4.994852 TCTTGAAAAGCGCTATGTTACAGT 59.005 37.500 12.05 0.00 45.70 3.55
2547 2673 6.090358 GTCTTGAAAAGCGCTATGTTACAGTA 59.910 38.462 12.05 0.00 45.70 2.74
2548 2674 6.647481 TCTTGAAAAGCGCTATGTTACAGTAA 59.353 34.615 12.05 0.00 45.70 2.24
2549 2675 6.160664 TGAAAAGCGCTATGTTACAGTAAC 57.839 37.500 12.05 15.58 39.11 2.50
2550 2676 7.570507 CTTGAAAAGCGCTATGTTACAGTAACA 60.571 37.037 25.09 25.09 44.55 2.41
2581 2707 8.771920 TGTTACCACTTCTCATTAACTACATG 57.228 34.615 0.00 0.00 0.00 3.21
2582 2708 7.333423 TGTTACCACTTCTCATTAACTACATGC 59.667 37.037 0.00 0.00 0.00 4.06
2583 2709 5.186198 ACCACTTCTCATTAACTACATGCC 58.814 41.667 0.00 0.00 0.00 4.40
2584 2710 5.185454 CCACTTCTCATTAACTACATGCCA 58.815 41.667 0.00 0.00 0.00 4.92
2585 2711 5.065218 CCACTTCTCATTAACTACATGCCAC 59.935 44.000 0.00 0.00 0.00 5.01
2586 2712 5.643348 CACTTCTCATTAACTACATGCCACA 59.357 40.000 0.00 0.00 0.00 4.17
2587 2713 6.317140 CACTTCTCATTAACTACATGCCACAT 59.683 38.462 0.00 0.00 0.00 3.21
2588 2714 7.495606 CACTTCTCATTAACTACATGCCACATA 59.504 37.037 0.00 0.00 0.00 2.29
2589 2715 8.046708 ACTTCTCATTAACTACATGCCACATAA 58.953 33.333 0.00 0.00 0.00 1.90
2590 2716 8.437360 TTCTCATTAACTACATGCCACATAAG 57.563 34.615 0.00 0.00 0.00 1.73
2591 2717 6.483307 TCTCATTAACTACATGCCACATAAGC 59.517 38.462 0.00 0.00 0.00 3.09
2592 2718 6.118852 TCATTAACTACATGCCACATAAGCA 58.881 36.000 0.00 0.00 45.94 3.91
2593 2719 6.601217 TCATTAACTACATGCCACATAAGCAA 59.399 34.615 0.00 0.00 44.83 3.91
2594 2720 6.825944 TTAACTACATGCCACATAAGCAAA 57.174 33.333 0.00 0.00 44.83 3.68
2595 2721 5.720371 AACTACATGCCACATAAGCAAAA 57.280 34.783 0.00 0.00 44.83 2.44
2596 2722 5.720371 ACTACATGCCACATAAGCAAAAA 57.280 34.783 0.00 0.00 44.83 1.94
2597 2723 6.284891 ACTACATGCCACATAAGCAAAAAT 57.715 33.333 0.00 0.00 44.83 1.82
2598 2724 6.700352 ACTACATGCCACATAAGCAAAAATT 58.300 32.000 0.00 0.00 44.83 1.82
2599 2725 7.160726 ACTACATGCCACATAAGCAAAAATTT 58.839 30.769 0.00 0.00 44.83 1.82
2600 2726 6.484818 ACATGCCACATAAGCAAAAATTTC 57.515 33.333 0.00 0.00 44.83 2.17
2601 2727 6.232692 ACATGCCACATAAGCAAAAATTTCT 58.767 32.000 0.00 0.00 44.83 2.52
2602 2728 6.369615 ACATGCCACATAAGCAAAAATTTCTC 59.630 34.615 0.00 0.00 44.83 2.87
2603 2729 4.922692 TGCCACATAAGCAAAAATTTCTCG 59.077 37.500 0.00 0.00 37.28 4.04
2604 2730 5.160641 GCCACATAAGCAAAAATTTCTCGA 58.839 37.500 0.00 0.00 0.00 4.04
2605 2731 5.633182 GCCACATAAGCAAAAATTTCTCGAA 59.367 36.000 0.00 0.00 0.00 3.71
2606 2732 6.145371 GCCACATAAGCAAAAATTTCTCGAAA 59.855 34.615 0.00 0.00 34.46 3.46
2607 2733 7.148590 GCCACATAAGCAAAAATTTCTCGAAAT 60.149 33.333 0.00 0.00 42.35 2.17
2608 2734 8.164153 CCACATAAGCAAAAATTTCTCGAAATG 58.836 33.333 5.71 0.00 40.57 2.32
2609 2735 7.685304 CACATAAGCAAAAATTTCTCGAAATGC 59.315 33.333 5.71 6.62 40.57 3.56
2610 2736 4.891277 AGCAAAAATTTCTCGAAATGCG 57.109 36.364 5.71 0.00 40.57 4.73
2611 2737 4.298332 AGCAAAAATTTCTCGAAATGCGT 58.702 34.783 5.71 0.00 40.57 5.24
2612 2738 4.744631 AGCAAAAATTTCTCGAAATGCGTT 59.255 33.333 5.71 0.00 40.57 4.84
2613 2739 5.918011 AGCAAAAATTTCTCGAAATGCGTTA 59.082 32.000 5.71 0.00 40.57 3.18
2614 2740 6.586082 AGCAAAAATTTCTCGAAATGCGTTAT 59.414 30.769 5.71 0.00 40.57 1.89
2615 2741 6.674090 GCAAAAATTTCTCGAAATGCGTTATG 59.326 34.615 5.71 2.57 40.57 1.90
2616 2742 7.619161 GCAAAAATTTCTCGAAATGCGTTATGT 60.619 33.333 5.71 0.00 40.57 2.29
2617 2743 7.867445 AAAATTTCTCGAAATGCGTTATGTT 57.133 28.000 5.71 0.00 40.57 2.71
2618 2744 8.958175 AAAATTTCTCGAAATGCGTTATGTTA 57.042 26.923 5.71 0.00 40.57 2.41
2619 2745 7.948513 AATTTCTCGAAATGCGTTATGTTAC 57.051 32.000 5.71 0.00 40.57 2.50
2620 2746 6.715344 TTTCTCGAAATGCGTTATGTTACT 57.285 33.333 0.00 0.00 41.80 2.24
2621 2747 6.715344 TTCTCGAAATGCGTTATGTTACTT 57.285 33.333 0.00 0.00 41.80 2.24
2622 2748 6.089920 TCTCGAAATGCGTTATGTTACTTG 57.910 37.500 0.00 0.00 41.80 3.16
2623 2749 4.643953 TCGAAATGCGTTATGTTACTTGC 58.356 39.130 0.00 0.00 41.80 4.01
2624 2750 4.390603 TCGAAATGCGTTATGTTACTTGCT 59.609 37.500 0.00 0.00 41.80 3.91
2625 2751 5.577554 TCGAAATGCGTTATGTTACTTGCTA 59.422 36.000 0.00 0.00 41.80 3.49
2626 2752 6.091034 TCGAAATGCGTTATGTTACTTGCTAA 59.909 34.615 0.00 0.00 41.80 3.09
2627 2753 6.408039 CGAAATGCGTTATGTTACTTGCTAAG 59.592 38.462 0.00 0.00 34.64 2.18
2628 2754 6.737254 AATGCGTTATGTTACTTGCTAAGT 57.263 33.333 6.74 6.74 45.40 2.24
2629 2755 6.737254 ATGCGTTATGTTACTTGCTAAGTT 57.263 33.333 6.82 0.00 42.81 2.66
2630 2756 7.837202 ATGCGTTATGTTACTTGCTAAGTTA 57.163 32.000 6.82 0.00 42.81 2.24
2631 2757 7.052565 TGCGTTATGTTACTTGCTAAGTTAC 57.947 36.000 6.82 8.42 42.81 2.50
2632 2758 6.869913 TGCGTTATGTTACTTGCTAAGTTACT 59.130 34.615 14.64 0.00 40.62 2.24
2633 2759 7.062605 TGCGTTATGTTACTTGCTAAGTTACTC 59.937 37.037 14.64 6.52 40.62 2.59
2634 2760 7.463780 GCGTTATGTTACTTGCTAAGTTACTCC 60.464 40.741 14.64 4.71 40.62 3.85
2635 2761 7.009907 CGTTATGTTACTTGCTAAGTTACTCCC 59.990 40.741 14.64 4.93 40.62 4.30
2636 2762 5.811796 TGTTACTTGCTAAGTTACTCCCA 57.188 39.130 14.64 0.00 40.62 4.37
2637 2763 5.544650 TGTTACTTGCTAAGTTACTCCCAC 58.455 41.667 14.64 0.00 40.62 4.61
2638 2764 5.306160 TGTTACTTGCTAAGTTACTCCCACT 59.694 40.000 14.64 0.00 40.62 4.00
2639 2765 6.494491 TGTTACTTGCTAAGTTACTCCCACTA 59.506 38.462 14.64 0.00 40.62 2.74
2640 2766 7.179694 TGTTACTTGCTAAGTTACTCCCACTAT 59.820 37.037 14.64 0.00 40.62 2.12
2641 2767 5.978814 ACTTGCTAAGTTACTCCCACTATG 58.021 41.667 0.00 0.00 39.04 2.23
2642 2768 5.720041 ACTTGCTAAGTTACTCCCACTATGA 59.280 40.000 0.00 0.00 39.04 2.15
2643 2769 5.593679 TGCTAAGTTACTCCCACTATGAC 57.406 43.478 0.00 0.00 0.00 3.06
2644 2770 5.269991 TGCTAAGTTACTCCCACTATGACT 58.730 41.667 0.00 0.00 0.00 3.41
2645 2771 6.429151 TGCTAAGTTACTCCCACTATGACTA 58.571 40.000 0.00 0.00 0.00 2.59
2646 2772 6.546403 TGCTAAGTTACTCCCACTATGACTAG 59.454 42.308 0.00 0.00 0.00 2.57
2647 2773 5.855740 AAGTTACTCCCACTATGACTAGC 57.144 43.478 0.00 0.00 0.00 3.42
2648 2774 4.216708 AGTTACTCCCACTATGACTAGCC 58.783 47.826 0.00 0.00 0.00 3.93
2686 2812 2.319472 GAACACAAGCTTTGATTCGGC 58.681 47.619 13.35 0.00 0.00 5.54
2714 2840 7.951530 AGTCATTTCAAGCCAAGTATTTTTG 57.048 32.000 0.00 0.00 0.00 2.44
3063 3194 2.108168 CCCCGAAACAGTATGAGAGGA 58.892 52.381 0.00 0.00 39.69 3.71
3156 3316 6.017934 ACCTAGTAAATGCAATACTTGATGCG 60.018 38.462 17.54 8.14 45.47 4.73
3199 3359 1.811679 GGAGTAAGAGGTGCTGCGC 60.812 63.158 0.00 0.00 0.00 6.09
3271 3431 1.355720 CTTTCCTCATTGGTGTCCCCT 59.644 52.381 0.00 0.00 37.07 4.79
3277 3437 0.179073 CATTGGTGTCCCCTAGCTCG 60.179 60.000 0.00 0.00 0.00 5.03
3305 3465 0.538977 GTCATCTGCATCCATGGGGG 60.539 60.000 13.02 5.50 38.37 5.40
3319 3479 3.308688 CCATGGGGGCTCTAATTATCTGG 60.309 52.174 2.85 0.00 0.00 3.86
3324 3484 5.136048 TGGGGGCTCTAATTATCTGGAAAAT 59.864 40.000 0.00 0.00 0.00 1.82
3355 3515 4.895224 CTGTCAGGTACGTGATAGCTTA 57.105 45.455 23.50 7.17 39.70 3.09
3461 3621 7.814264 ATCAGGTTGGAAGATATTCATGTTC 57.186 36.000 1.97 0.00 34.46 3.18
3695 3855 5.097529 CAGTTATGCTTGCAAGTATGGTTG 58.902 41.667 32.46 23.44 33.32 3.77
3907 4067 5.423015 AGTTCTGCAGGTTAGATACACATG 58.577 41.667 15.13 0.00 0.00 3.21
3979 4139 3.913089 CCTCCAGGTGTAAAATGTTTGC 58.087 45.455 0.00 0.00 0.00 3.68
4321 4481 2.687700 CTCCATGGTCTGAACTGGAG 57.312 55.000 19.66 19.66 46.33 3.86
4451 4611 1.071699 TCGGCTTTCCTACTTGTTGCT 59.928 47.619 0.00 0.00 0.00 3.91
4585 4745 4.226427 TCTCATGGAAGTTGGAATGGAG 57.774 45.455 0.00 0.00 0.00 3.86
4587 4747 4.289410 TCTCATGGAAGTTGGAATGGAGAA 59.711 41.667 0.00 0.00 0.00 2.87
4588 4748 4.996793 TCATGGAAGTTGGAATGGAGAAA 58.003 39.130 0.00 0.00 0.00 2.52
4589 4749 4.766891 TCATGGAAGTTGGAATGGAGAAAC 59.233 41.667 0.00 0.00 0.00 2.78
4907 5068 2.293399 CAGGTAGTTGGTTTGGCTGTTC 59.707 50.000 0.00 0.00 0.00 3.18
4923 5084 3.929610 GCTGTTCTGTACACCTTCAGATC 59.070 47.826 13.30 0.00 39.85 2.75
4969 5130 6.034683 CCTGTGAAATGTAGTTCTTACGTAGC 59.965 42.308 0.00 0.00 34.87 3.58
5133 5294 7.492669 GCAACTTCTACTGTAAATGAGCTATGA 59.507 37.037 0.00 0.00 0.00 2.15
5149 5311 3.003689 GCTATGATGTGCGGCTTTTATGT 59.996 43.478 0.00 0.00 0.00 2.29
5165 5327 7.041167 GGCTTTTATGTTCATTTTGGCTTTCTT 60.041 33.333 0.00 0.00 0.00 2.52
5196 5359 9.802039 ATGTAAATAGGTTGTTTCTTACTTCCA 57.198 29.630 0.00 0.00 0.00 3.53
5223 5386 3.923017 GCTCAAAGCTTTAGCCTTTCA 57.077 42.857 20.77 0.13 43.38 2.69
5502 5665 4.706842 ACCAGTCACAGGAATACAAAGT 57.293 40.909 0.00 0.00 0.00 2.66
5503 5666 5.048846 ACCAGTCACAGGAATACAAAGTT 57.951 39.130 0.00 0.00 0.00 2.66
5504 5667 5.445964 ACCAGTCACAGGAATACAAAGTTT 58.554 37.500 0.00 0.00 0.00 2.66
5505 5668 5.891551 ACCAGTCACAGGAATACAAAGTTTT 59.108 36.000 0.00 0.00 0.00 2.43
5506 5669 6.039382 ACCAGTCACAGGAATACAAAGTTTTC 59.961 38.462 0.00 0.00 0.00 2.29
5507 5670 6.136071 CAGTCACAGGAATACAAAGTTTTCG 58.864 40.000 0.00 0.00 0.00 3.46
5508 5671 6.018262 CAGTCACAGGAATACAAAGTTTTCGA 60.018 38.462 0.00 0.00 0.00 3.71
5509 5672 6.540914 AGTCACAGGAATACAAAGTTTTCGAA 59.459 34.615 0.00 0.00 0.00 3.71
5510 5673 6.631636 GTCACAGGAATACAAAGTTTTCGAAC 59.368 38.462 0.00 0.00 0.00 3.95
5511 5674 5.619607 CACAGGAATACAAAGTTTTCGAACG 59.380 40.000 0.00 0.00 0.00 3.95
5512 5675 5.524646 ACAGGAATACAAAGTTTTCGAACGA 59.475 36.000 0.00 0.00 0.00 3.85
5513 5676 5.844396 CAGGAATACAAAGTTTTCGAACGAC 59.156 40.000 0.00 0.00 0.00 4.34
5514 5677 5.049886 AGGAATACAAAGTTTTCGAACGACC 60.050 40.000 0.00 0.00 0.00 4.79
5515 5678 5.049886 GGAATACAAAGTTTTCGAACGACCT 60.050 40.000 0.00 0.00 0.00 3.85
5516 5679 3.668596 ACAAAGTTTTCGAACGACCTG 57.331 42.857 0.00 3.55 0.00 4.00
5517 5680 3.264104 ACAAAGTTTTCGAACGACCTGA 58.736 40.909 0.00 0.00 0.00 3.86
5518 5681 3.685756 ACAAAGTTTTCGAACGACCTGAA 59.314 39.130 0.00 0.00 0.00 3.02
5519 5682 4.334481 ACAAAGTTTTCGAACGACCTGAAT 59.666 37.500 0.00 0.00 0.00 2.57
5520 5683 5.524646 ACAAAGTTTTCGAACGACCTGAATA 59.475 36.000 0.00 0.00 0.00 1.75
5521 5684 5.587033 AAGTTTTCGAACGACCTGAATAC 57.413 39.130 0.00 0.00 0.00 1.89
5522 5685 4.879598 AGTTTTCGAACGACCTGAATACT 58.120 39.130 0.00 0.00 31.80 2.12
5523 5686 6.017400 AGTTTTCGAACGACCTGAATACTA 57.983 37.500 0.00 0.00 33.90 1.82
5524 5687 5.860716 AGTTTTCGAACGACCTGAATACTAC 59.139 40.000 0.00 0.00 33.90 2.73
5525 5688 5.375417 TTTCGAACGACCTGAATACTACA 57.625 39.130 0.00 0.00 0.00 2.74
5526 5689 5.375417 TTCGAACGACCTGAATACTACAA 57.625 39.130 0.00 0.00 0.00 2.41
5527 5690 5.375417 TCGAACGACCTGAATACTACAAA 57.625 39.130 0.00 0.00 0.00 2.83
5528 5691 5.396484 TCGAACGACCTGAATACTACAAAG 58.604 41.667 0.00 0.00 0.00 2.77
5529 5692 4.031426 CGAACGACCTGAATACTACAAAGC 59.969 45.833 0.00 0.00 0.00 3.51
5530 5693 4.530710 ACGACCTGAATACTACAAAGCA 57.469 40.909 0.00 0.00 0.00 3.91
5531 5694 5.086104 ACGACCTGAATACTACAAAGCAT 57.914 39.130 0.00 0.00 0.00 3.79
5532 5695 5.109903 ACGACCTGAATACTACAAAGCATC 58.890 41.667 0.00 0.00 0.00 3.91
5533 5696 5.105310 ACGACCTGAATACTACAAAGCATCT 60.105 40.000 0.00 0.00 0.00 2.90
5534 5697 6.096423 ACGACCTGAATACTACAAAGCATCTA 59.904 38.462 0.00 0.00 0.00 1.98
5535 5698 6.418226 CGACCTGAATACTACAAAGCATCTAC 59.582 42.308 0.00 0.00 0.00 2.59
5536 5699 6.583562 ACCTGAATACTACAAAGCATCTACC 58.416 40.000 0.00 0.00 0.00 3.18
5537 5700 5.992217 CCTGAATACTACAAAGCATCTACCC 59.008 44.000 0.00 0.00 0.00 3.69
5538 5701 6.183361 CCTGAATACTACAAAGCATCTACCCT 60.183 42.308 0.00 0.00 0.00 4.34
5539 5702 6.817184 TGAATACTACAAAGCATCTACCCTC 58.183 40.000 0.00 0.00 0.00 4.30
5540 5703 3.802948 ACTACAAAGCATCTACCCTCG 57.197 47.619 0.00 0.00 0.00 4.63
5541 5704 2.159085 ACTACAAAGCATCTACCCTCGC 60.159 50.000 0.00 0.00 0.00 5.03
5542 5705 0.107654 ACAAAGCATCTACCCTCGCC 60.108 55.000 0.00 0.00 0.00 5.54
5543 5706 1.144057 AAAGCATCTACCCTCGCCG 59.856 57.895 0.00 0.00 0.00 6.46
5544 5707 2.311688 AAAGCATCTACCCTCGCCGG 62.312 60.000 0.00 0.00 0.00 6.13
5545 5708 3.224324 GCATCTACCCTCGCCGGA 61.224 66.667 5.05 0.00 33.16 5.14
5546 5709 2.792947 GCATCTACCCTCGCCGGAA 61.793 63.158 5.05 0.00 33.16 4.30
5547 5710 2.050269 CATCTACCCTCGCCGGAAT 58.950 57.895 5.05 0.00 33.16 3.01
5548 5711 1.254026 CATCTACCCTCGCCGGAATA 58.746 55.000 5.05 0.00 33.16 1.75
5549 5712 1.616865 CATCTACCCTCGCCGGAATAA 59.383 52.381 5.05 0.00 33.16 1.40
5550 5713 1.035139 TCTACCCTCGCCGGAATAAC 58.965 55.000 5.05 0.00 33.16 1.89
5551 5714 0.033090 CTACCCTCGCCGGAATAACC 59.967 60.000 5.05 0.00 33.16 2.85
5552 5715 0.397535 TACCCTCGCCGGAATAACCT 60.398 55.000 5.05 0.00 36.31 3.50
5553 5716 0.397535 ACCCTCGCCGGAATAACCTA 60.398 55.000 5.05 0.00 36.31 3.08
5554 5717 0.033090 CCCTCGCCGGAATAACCTAC 59.967 60.000 5.05 0.00 36.31 3.18
5555 5718 0.748450 CCTCGCCGGAATAACCTACA 59.252 55.000 5.05 0.00 36.31 2.74
5556 5719 1.269621 CCTCGCCGGAATAACCTACAG 60.270 57.143 5.05 0.00 36.31 2.74
5557 5720 0.103572 TCGCCGGAATAACCTACAGC 59.896 55.000 5.05 0.00 36.31 4.40
5558 5721 0.878961 CGCCGGAATAACCTACAGCC 60.879 60.000 5.05 0.00 36.31 4.85
5559 5722 0.179468 GCCGGAATAACCTACAGCCA 59.821 55.000 5.05 0.00 36.31 4.75
5560 5723 1.407712 GCCGGAATAACCTACAGCCAA 60.408 52.381 5.05 0.00 36.31 4.52
5561 5724 2.285977 CCGGAATAACCTACAGCCAAC 58.714 52.381 0.00 0.00 36.31 3.77
5562 5725 2.355310 CCGGAATAACCTACAGCCAACA 60.355 50.000 0.00 0.00 36.31 3.33
5563 5726 3.541632 CGGAATAACCTACAGCCAACAT 58.458 45.455 0.00 0.00 36.31 2.71
5564 5727 4.443739 CCGGAATAACCTACAGCCAACATA 60.444 45.833 0.00 0.00 36.31 2.29
5565 5728 4.750098 CGGAATAACCTACAGCCAACATAG 59.250 45.833 0.00 0.00 36.31 2.23
5566 5729 4.515567 GGAATAACCTACAGCCAACATAGC 59.484 45.833 0.00 0.00 35.41 2.97
5567 5730 4.771114 ATAACCTACAGCCAACATAGCA 57.229 40.909 0.00 0.00 0.00 3.49
5568 5731 2.698855 ACCTACAGCCAACATAGCAG 57.301 50.000 0.00 0.00 0.00 4.24
5569 5732 1.909302 ACCTACAGCCAACATAGCAGT 59.091 47.619 0.00 0.00 34.12 4.40
5570 5733 2.305927 ACCTACAGCCAACATAGCAGTT 59.694 45.455 0.00 0.00 31.85 3.16
5571 5734 3.244911 ACCTACAGCCAACATAGCAGTTT 60.245 43.478 0.00 0.00 31.85 2.66
5572 5735 3.758554 CCTACAGCCAACATAGCAGTTTT 59.241 43.478 0.00 0.00 31.85 2.43
5573 5736 4.941263 CCTACAGCCAACATAGCAGTTTTA 59.059 41.667 0.00 0.00 31.85 1.52
5574 5737 4.766404 ACAGCCAACATAGCAGTTTTAC 57.234 40.909 0.00 0.00 0.00 2.01
5575 5738 3.188460 ACAGCCAACATAGCAGTTTTACG 59.812 43.478 0.00 0.00 0.00 3.18
5576 5739 3.188460 CAGCCAACATAGCAGTTTTACGT 59.812 43.478 0.00 0.00 0.00 3.57
5577 5740 3.435671 AGCCAACATAGCAGTTTTACGTC 59.564 43.478 0.00 0.00 0.00 4.34
5578 5741 3.435671 GCCAACATAGCAGTTTTACGTCT 59.564 43.478 0.00 0.00 0.00 4.18
5579 5742 4.628333 GCCAACATAGCAGTTTTACGTCTA 59.372 41.667 0.00 0.00 0.00 2.59
5580 5743 5.220416 GCCAACATAGCAGTTTTACGTCTAG 60.220 44.000 0.00 0.00 0.00 2.43
5581 5744 5.867716 CCAACATAGCAGTTTTACGTCTAGT 59.132 40.000 0.00 0.00 0.00 2.57
5582 5745 6.183360 CCAACATAGCAGTTTTACGTCTAGTG 60.183 42.308 0.00 0.00 0.00 2.74
5583 5746 5.408356 ACATAGCAGTTTTACGTCTAGTGG 58.592 41.667 0.00 0.00 0.00 4.00
5584 5747 2.685100 AGCAGTTTTACGTCTAGTGGC 58.315 47.619 0.00 0.00 0.00 5.01
5585 5748 2.036733 AGCAGTTTTACGTCTAGTGGCA 59.963 45.455 0.00 0.00 0.00 4.92
5586 5749 2.803956 GCAGTTTTACGTCTAGTGGCAA 59.196 45.455 0.00 0.00 0.00 4.52
5587 5750 3.363673 GCAGTTTTACGTCTAGTGGCAAC 60.364 47.826 0.00 0.00 0.00 4.17
5601 5764 2.000429 GGCAACAAAGCATCATGTCC 58.000 50.000 0.00 0.00 35.83 4.02
5602 5765 1.273048 GGCAACAAAGCATCATGTCCA 59.727 47.619 0.00 0.00 35.83 4.02
5603 5766 2.288948 GGCAACAAAGCATCATGTCCAA 60.289 45.455 0.00 0.00 35.83 3.53
5604 5767 3.391965 GCAACAAAGCATCATGTCCAAA 58.608 40.909 0.00 0.00 0.00 3.28
5605 5768 3.184986 GCAACAAAGCATCATGTCCAAAC 59.815 43.478 0.00 0.00 0.00 2.93
5606 5769 3.665745 ACAAAGCATCATGTCCAAACC 57.334 42.857 0.00 0.00 0.00 3.27
5607 5770 2.964464 ACAAAGCATCATGTCCAAACCA 59.036 40.909 0.00 0.00 0.00 3.67
5608 5771 3.387374 ACAAAGCATCATGTCCAAACCAA 59.613 39.130 0.00 0.00 0.00 3.67
5609 5772 4.040706 ACAAAGCATCATGTCCAAACCAAT 59.959 37.500 0.00 0.00 0.00 3.16
5610 5773 4.895668 AAGCATCATGTCCAAACCAATT 57.104 36.364 0.00 0.00 0.00 2.32
5611 5774 5.999205 AAGCATCATGTCCAAACCAATTA 57.001 34.783 0.00 0.00 0.00 1.40
5612 5775 6.549433 AAGCATCATGTCCAAACCAATTAT 57.451 33.333 0.00 0.00 0.00 1.28
5613 5776 6.549433 AGCATCATGTCCAAACCAATTATT 57.451 33.333 0.00 0.00 0.00 1.40
5614 5777 7.658525 AGCATCATGTCCAAACCAATTATTA 57.341 32.000 0.00 0.00 0.00 0.98
5615 5778 7.491682 AGCATCATGTCCAAACCAATTATTAC 58.508 34.615 0.00 0.00 0.00 1.89
5616 5779 7.123997 AGCATCATGTCCAAACCAATTATTACA 59.876 33.333 0.00 0.00 0.00 2.41
5617 5780 7.436080 GCATCATGTCCAAACCAATTATTACAG 59.564 37.037 0.00 0.00 0.00 2.74
5618 5781 8.685427 CATCATGTCCAAACCAATTATTACAGA 58.315 33.333 0.00 0.00 0.00 3.41
5619 5782 8.279970 TCATGTCCAAACCAATTATTACAGAG 57.720 34.615 0.00 0.00 0.00 3.35
5620 5783 7.339212 TCATGTCCAAACCAATTATTACAGAGG 59.661 37.037 0.00 0.00 0.00 3.69
5621 5784 6.548321 TGTCCAAACCAATTATTACAGAGGT 58.452 36.000 0.00 0.00 0.00 3.85
5622 5785 6.657541 TGTCCAAACCAATTATTACAGAGGTC 59.342 38.462 0.00 0.00 0.00 3.85
5623 5786 6.095021 GTCCAAACCAATTATTACAGAGGTCC 59.905 42.308 0.00 0.00 0.00 4.46
5624 5787 5.949354 CCAAACCAATTATTACAGAGGTCCA 59.051 40.000 0.00 0.00 0.00 4.02
5625 5788 6.435904 CCAAACCAATTATTACAGAGGTCCAA 59.564 38.462 0.00 0.00 0.00 3.53
5626 5789 7.312899 CAAACCAATTATTACAGAGGTCCAAC 58.687 38.462 0.00 0.00 0.00 3.77
5627 5790 6.134535 ACCAATTATTACAGAGGTCCAACA 57.865 37.500 0.00 0.00 0.00 3.33
5628 5791 6.180472 ACCAATTATTACAGAGGTCCAACAG 58.820 40.000 0.00 0.00 0.00 3.16
5629 5792 5.590259 CCAATTATTACAGAGGTCCAACAGG 59.410 44.000 0.00 0.00 0.00 4.00
5630 5793 6.414732 CAATTATTACAGAGGTCCAACAGGA 58.585 40.000 0.00 0.00 0.00 3.86
5631 5794 6.636454 ATTATTACAGAGGTCCAACAGGAA 57.364 37.500 0.00 0.00 32.04 3.36
5632 5795 4.559862 ATTACAGAGGTCCAACAGGAAG 57.440 45.455 0.00 0.00 32.04 3.46
5633 5796 2.103153 ACAGAGGTCCAACAGGAAGA 57.897 50.000 0.00 0.00 32.04 2.87
5634 5797 2.408565 ACAGAGGTCCAACAGGAAGAA 58.591 47.619 0.00 0.00 32.04 2.52
5635 5798 2.777692 ACAGAGGTCCAACAGGAAGAAA 59.222 45.455 0.00 0.00 32.04 2.52
5636 5799 3.181450 ACAGAGGTCCAACAGGAAGAAAG 60.181 47.826 0.00 0.00 32.04 2.62
5637 5800 2.373502 AGAGGTCCAACAGGAAGAAAGG 59.626 50.000 0.00 0.00 32.04 3.11
5638 5801 2.372172 GAGGTCCAACAGGAAGAAAGGA 59.628 50.000 0.00 0.00 32.04 3.36
5639 5802 2.783510 AGGTCCAACAGGAAGAAAGGAA 59.216 45.455 0.00 0.00 32.04 3.36
5640 5803 3.204382 AGGTCCAACAGGAAGAAAGGAAA 59.796 43.478 0.00 0.00 32.04 3.13
5641 5804 3.318275 GGTCCAACAGGAAGAAAGGAAAC 59.682 47.826 0.00 0.00 32.04 2.78
5642 5805 3.003378 GTCCAACAGGAAGAAAGGAAACG 59.997 47.826 0.00 0.00 32.04 3.60
5643 5806 3.118186 TCCAACAGGAAGAAAGGAAACGA 60.118 43.478 0.00 0.00 0.00 3.85
5644 5807 3.630312 CCAACAGGAAGAAAGGAAACGAA 59.370 43.478 0.00 0.00 0.00 3.85
5645 5808 4.261197 CCAACAGGAAGAAAGGAAACGAAG 60.261 45.833 0.00 0.00 0.00 3.79
5646 5809 4.417426 ACAGGAAGAAAGGAAACGAAGA 57.583 40.909 0.00 0.00 0.00 2.87
5647 5810 4.777463 ACAGGAAGAAAGGAAACGAAGAA 58.223 39.130 0.00 0.00 0.00 2.52
5648 5811 4.816925 ACAGGAAGAAAGGAAACGAAGAAG 59.183 41.667 0.00 0.00 0.00 2.85
5649 5812 5.057149 CAGGAAGAAAGGAAACGAAGAAGA 58.943 41.667 0.00 0.00 0.00 2.87
5650 5813 5.703130 CAGGAAGAAAGGAAACGAAGAAGAT 59.297 40.000 0.00 0.00 0.00 2.40
5651 5814 5.703130 AGGAAGAAAGGAAACGAAGAAGATG 59.297 40.000 0.00 0.00 0.00 2.90
5652 5815 5.106515 GGAAGAAAGGAAACGAAGAAGATGG 60.107 44.000 0.00 0.00 0.00 3.51
5653 5816 5.228945 AGAAAGGAAACGAAGAAGATGGA 57.771 39.130 0.00 0.00 0.00 3.41
5654 5817 5.810095 AGAAAGGAAACGAAGAAGATGGAT 58.190 37.500 0.00 0.00 0.00 3.41
5655 5818 5.877564 AGAAAGGAAACGAAGAAGATGGATC 59.122 40.000 0.00 0.00 0.00 3.36
5656 5819 5.428184 AAGGAAACGAAGAAGATGGATCT 57.572 39.130 0.00 0.00 39.22 2.75
5657 5820 6.546428 AAGGAAACGAAGAAGATGGATCTA 57.454 37.500 0.00 0.00 35.76 1.98
5658 5821 6.546428 AGGAAACGAAGAAGATGGATCTAA 57.454 37.500 0.00 0.00 35.76 2.10
5659 5822 6.947464 AGGAAACGAAGAAGATGGATCTAAA 58.053 36.000 0.00 0.00 35.76 1.85
5660 5823 7.569240 AGGAAACGAAGAAGATGGATCTAAAT 58.431 34.615 0.00 0.00 35.76 1.40
5661 5824 7.713073 AGGAAACGAAGAAGATGGATCTAAATC 59.287 37.037 0.00 0.00 35.76 2.17
5672 5835 3.618690 GATCTAAATCCGATCCCCAGG 57.381 52.381 0.00 0.00 32.94 4.45
5673 5836 1.729586 TCTAAATCCGATCCCCAGGG 58.270 55.000 0.00 0.00 0.00 4.45
5682 5845 2.692368 TCCCCAGGGATGCTCCAC 60.692 66.667 7.25 0.00 39.76 4.02
5683 5846 3.813724 CCCCAGGGATGCTCCACC 61.814 72.222 7.25 0.00 38.64 4.61
5684 5847 3.016971 CCCAGGGATGCTCCACCA 61.017 66.667 0.00 0.00 38.64 4.17
5685 5848 2.389449 CCCAGGGATGCTCCACCAT 61.389 63.158 0.00 0.00 38.64 3.55
5686 5849 1.150081 CCAGGGATGCTCCACCATC 59.850 63.158 4.85 0.00 38.64 3.51
5687 5850 1.351080 CCAGGGATGCTCCACCATCT 61.351 60.000 4.85 0.00 41.04 2.90
5688 5851 0.108207 CAGGGATGCTCCACCATCTC 59.892 60.000 4.85 0.00 41.93 2.75
5689 5852 1.059006 AGGGATGCTCCACCATCTCC 61.059 60.000 4.85 1.30 42.46 3.71
5690 5853 1.348008 GGGATGCTCCACCATCTCCA 61.348 60.000 4.85 0.00 41.04 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
223 224 2.688446 TGGTTCGTTTGGTGCATAACAA 59.312 40.909 0.00 0.00 0.00 2.83
239 240 7.826260 TTCATTTTGTCAAGTTCTTTGGTTC 57.174 32.000 0.00 0.00 37.39 3.62
241 242 7.555087 TCATTCATTTTGTCAAGTTCTTTGGT 58.445 30.769 0.00 0.00 37.39 3.67
267 268 7.653311 GCCCATGGAAATTTTCATTGTACTATC 59.347 37.037 15.22 0.00 0.00 2.08
270 271 5.248020 TGCCCATGGAAATTTTCATTGTACT 59.752 36.000 15.22 0.00 0.00 2.73
279 280 5.073008 ACTTTTAGGTGCCCATGGAAATTTT 59.927 36.000 15.22 0.00 0.00 1.82
287 288 4.079253 ACTTGTACTTTTAGGTGCCCATG 58.921 43.478 0.00 0.00 0.00 3.66
305 355 8.018520 TCTGTAACAACTAACAACACAAACTTG 58.981 33.333 0.00 0.00 0.00 3.16
323 373 8.956426 GGTGAAGAAATATTTCCATCTGTAACA 58.044 33.333 21.86 8.43 37.92 2.41
324 374 8.956426 TGGTGAAGAAATATTTCCATCTGTAAC 58.044 33.333 21.86 14.29 37.92 2.50
326 376 9.699410 AATGGTGAAGAAATATTTCCATCTGTA 57.301 29.630 21.86 11.99 37.92 2.74
327 377 8.599624 AATGGTGAAGAAATATTTCCATCTGT 57.400 30.769 21.86 2.46 37.92 3.41
328 378 8.139989 GGAATGGTGAAGAAATATTTCCATCTG 58.860 37.037 21.86 0.00 37.92 2.90
329 379 7.840716 TGGAATGGTGAAGAAATATTTCCATCT 59.159 33.333 21.86 10.66 37.92 2.90
330 380 8.010733 TGGAATGGTGAAGAAATATTTCCATC 57.989 34.615 21.86 19.76 37.92 3.51
331 381 7.620888 ACTGGAATGGTGAAGAAATATTTCCAT 59.379 33.333 21.86 16.00 37.92 3.41
332 382 6.953520 ACTGGAATGGTGAAGAAATATTTCCA 59.046 34.615 21.86 14.58 37.92 3.53
333 383 7.410120 ACTGGAATGGTGAAGAAATATTTCC 57.590 36.000 21.86 9.71 37.92 3.13
334 384 8.522830 TGAACTGGAATGGTGAAGAAATATTTC 58.477 33.333 18.70 18.70 37.45 2.17
335 385 8.421249 TGAACTGGAATGGTGAAGAAATATTT 57.579 30.769 0.00 0.00 0.00 1.40
338 388 8.421249 AATTGAACTGGAATGGTGAAGAAATA 57.579 30.769 0.00 0.00 0.00 1.40
344 394 6.775142 TGAAGTAATTGAACTGGAATGGTGAA 59.225 34.615 0.00 0.00 0.00 3.18
351 401 5.514834 CCCTCCTGAAGTAATTGAACTGGAA 60.515 44.000 0.00 0.00 0.00 3.53
359 409 3.117738 AGCATCCCCTCCTGAAGTAATTG 60.118 47.826 0.00 0.00 0.00 2.32
383 433 3.505386 AGACATCATTAGCCGAGGATCT 58.495 45.455 0.00 0.00 0.00 2.75
387 437 3.192422 CCTCTAGACATCATTAGCCGAGG 59.808 52.174 0.00 0.00 0.00 4.63
390 440 2.353208 GGCCTCTAGACATCATTAGCCG 60.353 54.545 0.00 0.00 0.00 5.52
393 443 3.242867 TGGGGCCTCTAGACATCATTAG 58.757 50.000 3.07 0.00 0.00 1.73
416 466 3.693578 TGTCAGTTGTTGCTGTGAAATCA 59.306 39.130 0.00 0.00 37.70 2.57
456 506 7.556275 TGTCAAGTCTCCTCAAAATTTTACACT 59.444 33.333 2.44 0.00 0.00 3.55
462 512 4.261197 GCGTGTCAAGTCTCCTCAAAATTT 60.261 41.667 0.00 0.00 0.00 1.82
506 556 3.735237 ATCGTTAGGGTAGATGCACTG 57.265 47.619 0.00 0.00 0.00 3.66
531 581 4.770010 CCCCTTGTAATTAGCTGGTTCAAA 59.230 41.667 0.00 0.00 0.00 2.69
532 582 4.202631 ACCCCTTGTAATTAGCTGGTTCAA 60.203 41.667 0.00 0.00 0.00 2.69
533 583 3.332485 ACCCCTTGTAATTAGCTGGTTCA 59.668 43.478 0.00 0.00 0.00 3.18
534 584 3.964411 ACCCCTTGTAATTAGCTGGTTC 58.036 45.455 0.00 0.00 0.00 3.62
535 585 4.086457 CAACCCCTTGTAATTAGCTGGTT 58.914 43.478 0.00 0.00 35.33 3.67
543 593 4.746466 TCAACATCCAACCCCTTGTAATT 58.254 39.130 0.00 0.00 0.00 1.40
551 601 2.102578 CTCCATTCAACATCCAACCCC 58.897 52.381 0.00 0.00 0.00 4.95
574 624 1.599576 GCTTCTGTGAGTCCCTCCC 59.400 63.158 0.00 0.00 0.00 4.30
700 750 1.300620 CGGACTTTGTGGACGCAGA 60.301 57.895 0.00 0.00 0.00 4.26
705 755 1.079503 GCTGATCGGACTTTGTGGAC 58.920 55.000 5.48 0.00 0.00 4.02
736 786 3.007831 GGCTATCTCTCCCCTCTCATTTG 59.992 52.174 0.00 0.00 0.00 2.32
737 787 3.247162 GGCTATCTCTCCCCTCTCATTT 58.753 50.000 0.00 0.00 0.00 2.32
743 793 0.404812 TACCGGCTATCTCTCCCCTC 59.595 60.000 0.00 0.00 0.00 4.30
854 951 0.747852 CTACCTCTTCTTCGCCCTCC 59.252 60.000 0.00 0.00 0.00 4.30
897 994 1.365999 CCGGTTTTGTTGGGCCTTC 59.634 57.895 4.53 0.00 0.00 3.46
921 1018 2.319844 TCAGTCTTCAGTGGCAGAGAA 58.680 47.619 0.00 0.00 0.00 2.87
989 1086 2.584418 CCGCCATGAGTCTGAGCG 60.584 66.667 12.37 12.37 46.04 5.03
990 1087 2.894387 GCCGCCATGAGTCTGAGC 60.894 66.667 0.00 0.00 0.00 4.26
991 1088 2.584418 CGCCGCCATGAGTCTGAG 60.584 66.667 0.00 0.00 0.00 3.35
992 1089 3.068064 TCGCCGCCATGAGTCTGA 61.068 61.111 0.00 0.00 0.00 3.27
1203 1300 1.839994 TCATTCCTTTCAGGCTCCGAT 59.160 47.619 0.00 0.00 34.61 4.18
1206 1303 1.561542 TCCTCATTCCTTTCAGGCTCC 59.438 52.381 0.00 0.00 34.61 4.70
1221 1318 1.759445 GCAGTCATAGCTTCCTCCTCA 59.241 52.381 0.00 0.00 0.00 3.86
1268 1368 1.671054 ATCCCAACCGTGTCAAGCG 60.671 57.895 0.00 0.00 0.00 4.68
1415 1515 1.270732 CCATAGTCCAGAGGCATCAGC 60.271 57.143 0.00 0.00 41.10 4.26
1417 1517 2.180946 ACCATAGTCCAGAGGCATCA 57.819 50.000 0.00 0.00 0.00 3.07
1561 1661 9.185192 CTCGAAATTTCTAGCACAAAATCTTTT 57.815 29.630 15.92 0.00 0.00 2.27
1583 1683 2.743664 CACATGAATGTCAAAGGCTCGA 59.256 45.455 0.00 0.00 39.39 4.04
1594 1694 5.247862 TGCAGATTGACTACACATGAATGT 58.752 37.500 0.00 0.00 42.84 2.71
1681 1807 8.186821 TCTTTCCGGTTCAAAACGTAAATTTAA 58.813 29.630 0.00 0.00 0.00 1.52
1691 1817 5.344884 TCAACAATCTTTCCGGTTCAAAAC 58.655 37.500 0.00 0.00 0.00 2.43
1700 1826 4.009675 TCAAGGGATCAACAATCTTTCCG 58.990 43.478 0.00 0.00 34.56 4.30
1956 2082 9.535270 CTTCGAAATTCATCTTTTAAGTGAGAC 57.465 33.333 0.00 0.00 0.00 3.36
2214 2340 5.221106 GGCATTTATCTGAACATTAGCAGCA 60.221 40.000 0.00 0.00 32.27 4.41
2259 2385 6.962182 TCAATCTCATCCTAACTTGGTTCAT 58.038 36.000 0.00 0.00 0.00 2.57
2383 2509 1.009060 TCCCCACTATGACCAGCCTTA 59.991 52.381 0.00 0.00 0.00 2.69
2384 2510 0.253160 TCCCCACTATGACCAGCCTT 60.253 55.000 0.00 0.00 0.00 4.35
2385 2511 0.692419 CTCCCCACTATGACCAGCCT 60.692 60.000 0.00 0.00 0.00 4.58
2386 2512 0.983378 ACTCCCCACTATGACCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
2387 2513 1.789523 TACTCCCCACTATGACCAGC 58.210 55.000 0.00 0.00 0.00 4.85
2388 2514 3.375699 AGTTACTCCCCACTATGACCAG 58.624 50.000 0.00 0.00 0.00 4.00
2389 2515 3.484953 AGTTACTCCCCACTATGACCA 57.515 47.619 0.00 0.00 0.00 4.02
2390 2516 6.781507 AGTATAAGTTACTCCCCACTATGACC 59.218 42.308 0.00 0.00 0.00 4.02
2391 2517 7.836479 AGTATAAGTTACTCCCCACTATGAC 57.164 40.000 0.00 0.00 0.00 3.06
2392 2518 8.730948 ACTAGTATAAGTTACTCCCCACTATGA 58.269 37.037 0.00 0.00 0.00 2.15
2393 2519 8.794553 CACTAGTATAAGTTACTCCCCACTATG 58.205 40.741 0.00 0.00 0.00 2.23
2394 2520 8.509441 ACACTAGTATAAGTTACTCCCCACTAT 58.491 37.037 0.00 0.00 0.00 2.12
2395 2521 7.876371 ACACTAGTATAAGTTACTCCCCACTA 58.124 38.462 0.00 0.00 0.00 2.74
2396 2522 6.739664 ACACTAGTATAAGTTACTCCCCACT 58.260 40.000 0.00 0.00 0.00 4.00
2397 2523 6.604795 TGACACTAGTATAAGTTACTCCCCAC 59.395 42.308 0.00 0.00 0.00 4.61
2398 2524 6.734532 TGACACTAGTATAAGTTACTCCCCA 58.265 40.000 0.00 0.00 0.00 4.96
2399 2525 7.836479 ATGACACTAGTATAAGTTACTCCCC 57.164 40.000 0.00 0.00 0.00 4.81
2400 2526 9.347240 TGTATGACACTAGTATAAGTTACTCCC 57.653 37.037 0.00 0.00 0.00 4.30
2430 2556 9.524496 TGAAGGTAGTAATTTAGACTAGTGTCA 57.476 33.333 0.00 0.00 45.20 3.58
2445 2571 9.727859 TGTTACTTTGCATTATGAAGGTAGTAA 57.272 29.630 0.00 0.00 0.00 2.24
2446 2572 9.899661 ATGTTACTTTGCATTATGAAGGTAGTA 57.100 29.630 0.00 0.00 0.00 1.82
2447 2573 8.807948 ATGTTACTTTGCATTATGAAGGTAGT 57.192 30.769 0.00 0.00 0.00 2.73
2449 2575 9.899661 ACTATGTTACTTTGCATTATGAAGGTA 57.100 29.630 0.00 0.00 0.00 3.08
2450 2576 8.807948 ACTATGTTACTTTGCATTATGAAGGT 57.192 30.769 0.00 0.00 0.00 3.50
2458 2584 9.367444 GACACTACTACTATGTTACTTTGCATT 57.633 33.333 0.00 0.00 0.00 3.56
2459 2585 8.528643 TGACACTACTACTATGTTACTTTGCAT 58.471 33.333 0.00 0.00 0.00 3.96
2460 2586 7.888424 TGACACTACTACTATGTTACTTTGCA 58.112 34.615 0.00 0.00 0.00 4.08
2461 2587 8.928270 ATGACACTACTACTATGTTACTTTGC 57.072 34.615 0.00 0.00 0.00 3.68
2468 2594 9.908747 AGTCTTCTATGACACTACTACTATGTT 57.091 33.333 0.00 0.00 39.27 2.71
2469 2595 9.908747 AAGTCTTCTATGACACTACTACTATGT 57.091 33.333 0.00 0.00 39.27 2.29
2473 2599 9.469097 AATGAAGTCTTCTATGACACTACTACT 57.531 33.333 13.67 0.00 39.27 2.57
2490 2616 9.810545 GAGTCTACAAGCTAATTAATGAAGTCT 57.189 33.333 0.00 0.00 0.00 3.24
2491 2617 9.587772 TGAGTCTACAAGCTAATTAATGAAGTC 57.412 33.333 0.00 0.00 0.00 3.01
2498 2624 9.587772 GACAAGATGAGTCTACAAGCTAATTAA 57.412 33.333 0.00 0.00 33.30 1.40
2499 2625 8.972127 AGACAAGATGAGTCTACAAGCTAATTA 58.028 33.333 0.00 0.00 44.10 1.40
2500 2626 7.846066 AGACAAGATGAGTCTACAAGCTAATT 58.154 34.615 0.00 0.00 44.10 1.40
2501 2627 7.416964 AGACAAGATGAGTCTACAAGCTAAT 57.583 36.000 0.00 0.00 44.10 1.73
2502 2628 6.842437 AGACAAGATGAGTCTACAAGCTAA 57.158 37.500 0.00 0.00 44.10 3.09
2503 2629 6.434340 TCAAGACAAGATGAGTCTACAAGCTA 59.566 38.462 0.00 0.00 45.11 3.32
2504 2630 5.244851 TCAAGACAAGATGAGTCTACAAGCT 59.755 40.000 0.00 0.00 45.11 3.74
2505 2631 5.473931 TCAAGACAAGATGAGTCTACAAGC 58.526 41.667 0.00 0.00 45.11 4.01
2506 2632 7.953158 TTTCAAGACAAGATGAGTCTACAAG 57.047 36.000 0.00 0.00 45.11 3.16
2507 2633 7.041780 GCTTTTCAAGACAAGATGAGTCTACAA 60.042 37.037 0.41 0.00 45.11 2.41
2508 2634 6.425114 GCTTTTCAAGACAAGATGAGTCTACA 59.575 38.462 0.41 0.00 45.11 2.74
2509 2635 6.400515 CGCTTTTCAAGACAAGATGAGTCTAC 60.401 42.308 0.41 0.00 45.11 2.59
2510 2636 5.635280 CGCTTTTCAAGACAAGATGAGTCTA 59.365 40.000 0.41 0.00 45.11 2.59
2512 2638 4.706527 CGCTTTTCAAGACAAGATGAGTC 58.293 43.478 0.41 0.00 36.26 3.36
2513 2639 3.058639 GCGCTTTTCAAGACAAGATGAGT 60.059 43.478 0.00 0.00 0.00 3.41
2514 2640 3.188048 AGCGCTTTTCAAGACAAGATGAG 59.812 43.478 2.64 0.00 0.00 2.90
2515 2641 3.141398 AGCGCTTTTCAAGACAAGATGA 58.859 40.909 2.64 0.00 0.00 2.92
2516 2642 3.549299 AGCGCTTTTCAAGACAAGATG 57.451 42.857 2.64 0.00 0.00 2.90
2517 2643 4.697352 ACATAGCGCTTTTCAAGACAAGAT 59.303 37.500 18.68 0.00 0.00 2.40
2518 2644 4.065088 ACATAGCGCTTTTCAAGACAAGA 58.935 39.130 18.68 0.00 0.00 3.02
2519 2645 4.410492 ACATAGCGCTTTTCAAGACAAG 57.590 40.909 18.68 0.00 0.00 3.16
2520 2646 4.829064 AACATAGCGCTTTTCAAGACAA 57.171 36.364 18.68 0.00 0.00 3.18
2521 2647 4.752604 TGTAACATAGCGCTTTTCAAGACA 59.247 37.500 18.68 9.17 0.00 3.41
2522 2648 5.107065 ACTGTAACATAGCGCTTTTCAAGAC 60.107 40.000 18.68 6.42 0.00 3.01
2523 2649 4.994852 ACTGTAACATAGCGCTTTTCAAGA 59.005 37.500 18.68 0.00 0.00 3.02
2524 2650 5.283060 ACTGTAACATAGCGCTTTTCAAG 57.717 39.130 18.68 7.94 0.00 3.02
2525 2651 6.203145 TGTTACTGTAACATAGCGCTTTTCAA 59.797 34.615 25.14 0.00 43.23 2.69
2526 2652 5.697178 TGTTACTGTAACATAGCGCTTTTCA 59.303 36.000 25.14 7.38 43.23 2.69
2527 2653 6.160664 TGTTACTGTAACATAGCGCTTTTC 57.839 37.500 25.14 2.12 43.23 2.29
2557 2683 7.201617 GGCATGTAGTTAATGAGAAGTGGTAAC 60.202 40.741 0.00 0.00 0.00 2.50
2558 2684 6.821665 GGCATGTAGTTAATGAGAAGTGGTAA 59.178 38.462 0.00 0.00 0.00 2.85
2559 2685 6.070481 TGGCATGTAGTTAATGAGAAGTGGTA 60.070 38.462 0.00 0.00 0.00 3.25
2560 2686 5.186198 GGCATGTAGTTAATGAGAAGTGGT 58.814 41.667 0.00 0.00 0.00 4.16
2561 2687 5.065218 GTGGCATGTAGTTAATGAGAAGTGG 59.935 44.000 0.00 0.00 0.00 4.00
2562 2688 5.643348 TGTGGCATGTAGTTAATGAGAAGTG 59.357 40.000 0.00 0.00 0.00 3.16
2563 2689 5.804639 TGTGGCATGTAGTTAATGAGAAGT 58.195 37.500 0.00 0.00 0.00 3.01
2564 2690 6.932356 ATGTGGCATGTAGTTAATGAGAAG 57.068 37.500 0.00 0.00 0.00 2.85
2565 2691 7.012327 GCTTATGTGGCATGTAGTTAATGAGAA 59.988 37.037 0.00 0.00 0.00 2.87
2566 2692 6.483307 GCTTATGTGGCATGTAGTTAATGAGA 59.517 38.462 0.00 0.00 0.00 3.27
2567 2693 6.260714 TGCTTATGTGGCATGTAGTTAATGAG 59.739 38.462 0.00 0.00 34.56 2.90
2568 2694 6.118852 TGCTTATGTGGCATGTAGTTAATGA 58.881 36.000 0.00 0.00 34.56 2.57
2569 2695 6.375945 TGCTTATGTGGCATGTAGTTAATG 57.624 37.500 0.00 0.00 34.56 1.90
2570 2696 7.403312 TTTGCTTATGTGGCATGTAGTTAAT 57.597 32.000 0.00 0.00 39.54 1.40
2571 2697 6.825944 TTTGCTTATGTGGCATGTAGTTAA 57.174 33.333 0.00 0.00 39.54 2.01
2572 2698 6.825944 TTTTGCTTATGTGGCATGTAGTTA 57.174 33.333 0.00 0.00 39.54 2.24
2573 2699 5.720371 TTTTGCTTATGTGGCATGTAGTT 57.280 34.783 0.00 0.00 39.54 2.24
2574 2700 5.720371 TTTTTGCTTATGTGGCATGTAGT 57.280 34.783 0.00 0.00 39.54 2.73
2575 2701 7.546667 AGAAATTTTTGCTTATGTGGCATGTAG 59.453 33.333 0.00 0.00 39.54 2.74
2576 2702 7.385267 AGAAATTTTTGCTTATGTGGCATGTA 58.615 30.769 0.00 0.00 39.54 2.29
2577 2703 6.232692 AGAAATTTTTGCTTATGTGGCATGT 58.767 32.000 0.00 0.00 39.54 3.21
2578 2704 6.454583 CGAGAAATTTTTGCTTATGTGGCATG 60.455 38.462 0.00 0.00 39.54 4.06
2579 2705 5.577945 CGAGAAATTTTTGCTTATGTGGCAT 59.422 36.000 0.00 0.00 39.54 4.40
2580 2706 4.922692 CGAGAAATTTTTGCTTATGTGGCA 59.077 37.500 0.00 0.00 37.97 4.92
2581 2707 5.160641 TCGAGAAATTTTTGCTTATGTGGC 58.839 37.500 0.00 0.00 0.00 5.01
2582 2708 7.636259 TTTCGAGAAATTTTTGCTTATGTGG 57.364 32.000 0.00 0.00 0.00 4.17
2583 2709 7.685304 GCATTTCGAGAAATTTTTGCTTATGTG 59.315 33.333 8.21 0.00 38.84 3.21
2584 2710 7.410728 CGCATTTCGAGAAATTTTTGCTTATGT 60.411 33.333 15.41 0.00 38.84 2.29
2585 2711 6.890870 CGCATTTCGAGAAATTTTTGCTTATG 59.109 34.615 15.41 3.49 38.84 1.90
2586 2712 6.586082 ACGCATTTCGAGAAATTTTTGCTTAT 59.414 30.769 15.41 3.82 38.84 1.73
2587 2713 5.918011 ACGCATTTCGAGAAATTTTTGCTTA 59.082 32.000 15.41 0.00 38.84 3.09
2588 2714 4.744631 ACGCATTTCGAGAAATTTTTGCTT 59.255 33.333 15.41 7.35 38.84 3.91
2589 2715 4.298332 ACGCATTTCGAGAAATTTTTGCT 58.702 34.783 15.41 5.04 38.84 3.91
2590 2716 4.629527 ACGCATTTCGAGAAATTTTTGC 57.370 36.364 8.21 9.38 38.84 3.68
2591 2717 7.719538 ACATAACGCATTTCGAGAAATTTTTG 58.280 30.769 8.21 8.56 38.84 2.44
2592 2718 7.867445 ACATAACGCATTTCGAGAAATTTTT 57.133 28.000 8.21 5.25 38.84 1.94
2593 2719 7.867445 AACATAACGCATTTCGAGAAATTTT 57.133 28.000 8.21 5.54 38.84 1.82
2594 2720 8.234546 AGTAACATAACGCATTTCGAGAAATTT 58.765 29.630 8.21 0.00 38.84 1.82
2595 2721 7.748847 AGTAACATAACGCATTTCGAGAAATT 58.251 30.769 8.21 0.00 38.84 1.82
2596 2722 7.303634 AGTAACATAACGCATTTCGAGAAAT 57.696 32.000 5.32 5.32 41.33 2.17
2597 2723 6.715344 AGTAACATAACGCATTTCGAGAAA 57.285 33.333 0.40 0.40 41.67 2.52
2598 2724 6.530567 CAAGTAACATAACGCATTTCGAGAA 58.469 36.000 0.00 0.00 41.67 2.87
2599 2725 5.445407 GCAAGTAACATAACGCATTTCGAGA 60.445 40.000 0.00 0.00 41.67 4.04
2600 2726 4.723862 GCAAGTAACATAACGCATTTCGAG 59.276 41.667 0.00 0.00 41.67 4.04
2601 2727 4.390603 AGCAAGTAACATAACGCATTTCGA 59.609 37.500 0.00 0.00 41.67 3.71
2602 2728 4.647964 AGCAAGTAACATAACGCATTTCG 58.352 39.130 0.00 0.00 45.38 3.46
2603 2729 7.241376 ACTTAGCAAGTAACATAACGCATTTC 58.759 34.615 0.44 0.00 40.69 2.17
2604 2730 7.141100 ACTTAGCAAGTAACATAACGCATTT 57.859 32.000 0.44 0.00 40.69 2.32
2605 2731 6.737254 ACTTAGCAAGTAACATAACGCATT 57.263 33.333 0.44 0.00 40.69 3.56
2606 2732 6.737254 AACTTAGCAAGTAACATAACGCAT 57.263 33.333 2.60 0.00 41.91 4.73
2607 2733 6.869913 AGTAACTTAGCAAGTAACATAACGCA 59.130 34.615 2.60 0.00 41.91 5.24
2608 2734 7.287050 AGTAACTTAGCAAGTAACATAACGC 57.713 36.000 2.60 0.00 41.91 4.84
2609 2735 7.009907 GGGAGTAACTTAGCAAGTAACATAACG 59.990 40.741 2.60 0.00 41.91 3.18
2610 2736 7.820872 TGGGAGTAACTTAGCAAGTAACATAAC 59.179 37.037 2.60 0.00 41.91 1.89
2611 2737 7.820872 GTGGGAGTAACTTAGCAAGTAACATAA 59.179 37.037 2.60 0.00 41.91 1.90
2612 2738 7.179694 AGTGGGAGTAACTTAGCAAGTAACATA 59.820 37.037 2.60 0.00 41.91 2.29
2613 2739 6.013639 AGTGGGAGTAACTTAGCAAGTAACAT 60.014 38.462 2.60 0.00 41.91 2.71
2614 2740 5.306160 AGTGGGAGTAACTTAGCAAGTAACA 59.694 40.000 2.60 0.00 41.91 2.41
2615 2741 5.791666 AGTGGGAGTAACTTAGCAAGTAAC 58.208 41.667 2.60 0.00 41.91 2.50
2616 2742 7.398047 TCATAGTGGGAGTAACTTAGCAAGTAA 59.602 37.037 2.60 0.00 41.91 2.24
2617 2743 6.893554 TCATAGTGGGAGTAACTTAGCAAGTA 59.106 38.462 2.60 0.00 41.91 2.24
2618 2744 5.720041 TCATAGTGGGAGTAACTTAGCAAGT 59.280 40.000 0.00 0.00 45.46 3.16
2619 2745 6.043411 GTCATAGTGGGAGTAACTTAGCAAG 58.957 44.000 0.00 0.00 0.00 4.01
2620 2746 5.720041 AGTCATAGTGGGAGTAACTTAGCAA 59.280 40.000 0.00 0.00 0.00 3.91
2621 2747 5.269991 AGTCATAGTGGGAGTAACTTAGCA 58.730 41.667 0.00 0.00 0.00 3.49
2622 2748 5.855740 AGTCATAGTGGGAGTAACTTAGC 57.144 43.478 0.00 0.00 0.00 3.09
2623 2749 6.016108 GGCTAGTCATAGTGGGAGTAACTTAG 60.016 46.154 0.00 0.00 0.00 2.18
2624 2750 5.832060 GGCTAGTCATAGTGGGAGTAACTTA 59.168 44.000 0.00 0.00 0.00 2.24
2625 2751 4.650131 GGCTAGTCATAGTGGGAGTAACTT 59.350 45.833 0.00 0.00 0.00 2.66
2626 2752 4.079096 AGGCTAGTCATAGTGGGAGTAACT 60.079 45.833 0.00 0.00 0.00 2.24
2627 2753 4.216708 AGGCTAGTCATAGTGGGAGTAAC 58.783 47.826 0.00 0.00 0.00 2.50
2628 2754 4.537945 AGGCTAGTCATAGTGGGAGTAA 57.462 45.455 0.00 0.00 0.00 2.24
2629 2755 5.133999 AGTTAGGCTAGTCATAGTGGGAGTA 59.866 44.000 0.00 0.00 0.00 2.59
2630 2756 4.079096 AGTTAGGCTAGTCATAGTGGGAGT 60.079 45.833 0.00 0.00 0.00 3.85
2631 2757 4.475345 AGTTAGGCTAGTCATAGTGGGAG 58.525 47.826 0.00 0.00 0.00 4.30
2632 2758 4.537945 AGTTAGGCTAGTCATAGTGGGA 57.462 45.455 0.00 0.00 0.00 4.37
2633 2759 6.726490 TTTAGTTAGGCTAGTCATAGTGGG 57.274 41.667 0.00 0.00 0.00 4.61
2634 2760 7.085116 CGATTTAGTTAGGCTAGTCATAGTGG 58.915 42.308 0.00 0.00 0.00 4.00
2635 2761 6.583050 GCGATTTAGTTAGGCTAGTCATAGTG 59.417 42.308 0.00 0.00 0.00 2.74
2636 2762 6.294620 GGCGATTTAGTTAGGCTAGTCATAGT 60.295 42.308 0.00 0.00 0.00 2.12
2637 2763 6.094061 GGCGATTTAGTTAGGCTAGTCATAG 58.906 44.000 0.00 0.00 0.00 2.23
2638 2764 5.047519 GGGCGATTTAGTTAGGCTAGTCATA 60.048 44.000 0.00 0.00 0.00 2.15
2639 2765 4.262506 GGGCGATTTAGTTAGGCTAGTCAT 60.263 45.833 0.00 0.00 0.00 3.06
2640 2766 3.069158 GGGCGATTTAGTTAGGCTAGTCA 59.931 47.826 0.00 0.00 0.00 3.41
2641 2767 3.554544 GGGGCGATTTAGTTAGGCTAGTC 60.555 52.174 0.00 0.00 0.00 2.59
2642 2768 2.367894 GGGGCGATTTAGTTAGGCTAGT 59.632 50.000 0.00 0.00 0.00 2.57
2643 2769 2.633481 AGGGGCGATTTAGTTAGGCTAG 59.367 50.000 0.00 0.00 0.00 3.42
2644 2770 2.367567 CAGGGGCGATTTAGTTAGGCTA 59.632 50.000 0.00 0.00 0.00 3.93
2645 2771 1.141053 CAGGGGCGATTTAGTTAGGCT 59.859 52.381 0.00 0.00 0.00 4.58
2646 2772 1.594331 CAGGGGCGATTTAGTTAGGC 58.406 55.000 0.00 0.00 0.00 3.93
2647 2773 1.766496 TCCAGGGGCGATTTAGTTAGG 59.234 52.381 0.00 0.00 0.00 2.69
2648 2774 3.203716 GTTCCAGGGGCGATTTAGTTAG 58.796 50.000 0.00 0.00 0.00 2.34
2686 2812 6.992063 ATACTTGGCTTGAAATGACTACAG 57.008 37.500 0.00 0.00 0.00 2.74
2977 3108 6.759272 TGAGACTTGCTTGTTACAGATACTT 58.241 36.000 0.00 0.00 0.00 2.24
3056 3187 1.210538 ATTGCAGCAGGATCCTCTCA 58.789 50.000 12.69 4.48 0.00 3.27
3063 3194 4.976864 TCATGTACATATTGCAGCAGGAT 58.023 39.130 8.32 0.00 0.00 3.24
3156 3316 4.965119 ACCAAGCGGAAAGACAAATATC 57.035 40.909 0.00 0.00 35.59 1.63
3199 3359 2.094494 ACTCAGATGTTACAGTCGCCAG 60.094 50.000 0.00 0.00 0.00 4.85
3271 3431 5.124936 TGCAGATGACTAAAAGTACGAGCTA 59.875 40.000 0.00 0.00 0.00 3.32
3277 3437 6.017605 CCATGGATGCAGATGACTAAAAGTAC 60.018 42.308 5.56 0.00 0.00 2.73
3305 3465 9.631452 GGCAAATATTTTCCAGATAATTAGAGC 57.369 33.333 11.49 0.68 0.00 4.09
3355 3515 4.453480 TTCAACTTCCAAAGGAGGATGT 57.547 40.909 1.90 0.00 45.03 3.06
3695 3855 7.312657 TGCATCATTGAGTAAAGAGATTGTC 57.687 36.000 0.00 0.00 0.00 3.18
3902 4062 6.506147 TGAACTTCTTTTTCCATGACATGTG 58.494 36.000 14.26 6.19 0.00 3.21
3907 4067 8.650714 GCATTTATGAACTTCTTTTTCCATGAC 58.349 33.333 0.00 0.00 0.00 3.06
4321 4481 2.680339 GGGAATAGAGTGCAAACAGAGC 59.320 50.000 0.00 0.00 0.00 4.09
4451 4611 2.158475 ACCAAGACCAAATTCAGGAGCA 60.158 45.455 4.06 0.00 0.00 4.26
4585 4745 3.756117 ACCTGAAGTCATCAAGGGTTTC 58.244 45.455 0.00 0.00 33.91 2.78
4587 4747 4.993705 TTACCTGAAGTCATCAAGGGTT 57.006 40.909 0.00 0.00 37.65 4.11
4588 4748 5.520748 AATTACCTGAAGTCATCAAGGGT 57.479 39.130 0.00 0.00 39.32 4.34
4589 4749 6.660949 AGAAAATTACCTGAAGTCATCAAGGG 59.339 38.462 0.00 0.00 37.67 3.95
4624 4784 1.285078 GGTCCACCTTTGCTCCCTAAT 59.715 52.381 0.00 0.00 0.00 1.73
4742 4902 8.520351 GCCAAGTAACTATACAAGAAAACCAAT 58.480 33.333 0.00 0.00 34.29 3.16
4757 4917 8.315482 TCTGTACATGTATTTGCCAAGTAACTA 58.685 33.333 9.18 0.00 0.00 2.24
4907 5068 4.282496 AGGGTAGATCTGAAGGTGTACAG 58.718 47.826 5.18 0.00 35.72 2.74
4969 5130 3.845178 TGCTTCTACGGTTACACATCAG 58.155 45.455 0.00 0.00 0.00 2.90
5001 5162 4.617995 GCACTTGCAATAATGGCTACAACA 60.618 41.667 0.00 0.00 41.59 3.33
5133 5294 4.454728 AATGAACATAAAAGCCGCACAT 57.545 36.364 0.00 0.00 0.00 3.21
5170 5333 9.802039 TGGAAGTAAGAAACAACCTATTTACAT 57.198 29.630 0.00 0.00 0.00 2.29
5481 5644 4.706842 ACTTTGTATTCCTGTGACTGGT 57.293 40.909 8.41 0.00 0.00 4.00
5482 5645 6.391227 AAAACTTTGTATTCCTGTGACTGG 57.609 37.500 1.59 1.59 0.00 4.00
5483 5646 6.018262 TCGAAAACTTTGTATTCCTGTGACTG 60.018 38.462 0.00 0.00 0.00 3.51
5484 5647 6.053005 TCGAAAACTTTGTATTCCTGTGACT 58.947 36.000 0.00 0.00 0.00 3.41
5485 5648 6.295039 TCGAAAACTTTGTATTCCTGTGAC 57.705 37.500 0.00 0.00 0.00 3.67
5486 5649 6.510478 CGTTCGAAAACTTTGTATTCCTGTGA 60.510 38.462 0.00 0.00 32.95 3.58
5487 5650 5.619607 CGTTCGAAAACTTTGTATTCCTGTG 59.380 40.000 0.00 0.00 32.95 3.66
5488 5651 5.524646 TCGTTCGAAAACTTTGTATTCCTGT 59.475 36.000 0.00 0.00 32.95 4.00
5489 5652 5.844396 GTCGTTCGAAAACTTTGTATTCCTG 59.156 40.000 0.00 0.00 32.95 3.86
5490 5653 5.049886 GGTCGTTCGAAAACTTTGTATTCCT 60.050 40.000 0.00 0.00 32.95 3.36
5491 5654 5.049886 AGGTCGTTCGAAAACTTTGTATTCC 60.050 40.000 0.00 0.00 32.95 3.01
5492 5655 5.844396 CAGGTCGTTCGAAAACTTTGTATTC 59.156 40.000 0.00 0.00 32.95 1.75
5493 5656 5.524646 TCAGGTCGTTCGAAAACTTTGTATT 59.475 36.000 0.00 0.00 32.95 1.89
5494 5657 5.051816 TCAGGTCGTTCGAAAACTTTGTAT 58.948 37.500 0.00 0.00 32.95 2.29
5495 5658 4.431809 TCAGGTCGTTCGAAAACTTTGTA 58.568 39.130 0.00 0.00 32.95 2.41
5496 5659 3.264104 TCAGGTCGTTCGAAAACTTTGT 58.736 40.909 0.00 0.00 32.95 2.83
5497 5660 3.936902 TCAGGTCGTTCGAAAACTTTG 57.063 42.857 0.00 5.28 32.95 2.77
5498 5661 5.756833 AGTATTCAGGTCGTTCGAAAACTTT 59.243 36.000 0.00 0.00 32.95 2.66
5499 5662 5.295152 AGTATTCAGGTCGTTCGAAAACTT 58.705 37.500 0.00 0.00 32.95 2.66
5500 5663 4.879598 AGTATTCAGGTCGTTCGAAAACT 58.120 39.130 0.00 0.00 32.95 2.66
5501 5664 5.630680 TGTAGTATTCAGGTCGTTCGAAAAC 59.369 40.000 0.00 0.93 0.00 2.43
5502 5665 5.771469 TGTAGTATTCAGGTCGTTCGAAAA 58.229 37.500 0.00 0.00 0.00 2.29
5503 5666 5.375417 TGTAGTATTCAGGTCGTTCGAAA 57.625 39.130 0.00 0.00 0.00 3.46
5504 5667 5.375417 TTGTAGTATTCAGGTCGTTCGAA 57.625 39.130 0.00 0.00 0.00 3.71
5505 5668 5.375417 TTTGTAGTATTCAGGTCGTTCGA 57.625 39.130 0.00 0.00 0.00 3.71
5506 5669 4.031426 GCTTTGTAGTATTCAGGTCGTTCG 59.969 45.833 0.00 0.00 0.00 3.95
5507 5670 4.927425 TGCTTTGTAGTATTCAGGTCGTTC 59.073 41.667 0.00 0.00 0.00 3.95
5508 5671 4.890088 TGCTTTGTAGTATTCAGGTCGTT 58.110 39.130 0.00 0.00 0.00 3.85
5509 5672 4.530710 TGCTTTGTAGTATTCAGGTCGT 57.469 40.909 0.00 0.00 0.00 4.34
5510 5673 5.352284 AGATGCTTTGTAGTATTCAGGTCG 58.648 41.667 0.00 0.00 0.00 4.79
5511 5674 6.702282 GGTAGATGCTTTGTAGTATTCAGGTC 59.298 42.308 0.00 0.00 0.00 3.85
5512 5675 6.408206 GGGTAGATGCTTTGTAGTATTCAGGT 60.408 42.308 0.00 0.00 0.00 4.00
5513 5676 5.992217 GGGTAGATGCTTTGTAGTATTCAGG 59.008 44.000 0.00 0.00 0.00 3.86
5514 5677 6.821388 AGGGTAGATGCTTTGTAGTATTCAG 58.179 40.000 0.00 0.00 0.00 3.02
5515 5678 6.461092 CGAGGGTAGATGCTTTGTAGTATTCA 60.461 42.308 0.00 0.00 0.00 2.57
5516 5679 5.921408 CGAGGGTAGATGCTTTGTAGTATTC 59.079 44.000 0.00 0.00 0.00 1.75
5517 5680 5.739358 GCGAGGGTAGATGCTTTGTAGTATT 60.739 44.000 0.00 0.00 0.00 1.89
5518 5681 4.262079 GCGAGGGTAGATGCTTTGTAGTAT 60.262 45.833 0.00 0.00 0.00 2.12
5519 5682 3.067742 GCGAGGGTAGATGCTTTGTAGTA 59.932 47.826 0.00 0.00 0.00 1.82
5520 5683 2.159085 GCGAGGGTAGATGCTTTGTAGT 60.159 50.000 0.00 0.00 0.00 2.73
5521 5684 2.474816 GCGAGGGTAGATGCTTTGTAG 58.525 52.381 0.00 0.00 0.00 2.74
5522 5685 1.138266 GGCGAGGGTAGATGCTTTGTA 59.862 52.381 0.00 0.00 0.00 2.41
5523 5686 0.107654 GGCGAGGGTAGATGCTTTGT 60.108 55.000 0.00 0.00 0.00 2.83
5524 5687 1.154205 CGGCGAGGGTAGATGCTTTG 61.154 60.000 0.00 0.00 0.00 2.77
5525 5688 1.144057 CGGCGAGGGTAGATGCTTT 59.856 57.895 0.00 0.00 0.00 3.51
5526 5689 2.797278 CCGGCGAGGGTAGATGCTT 61.797 63.158 9.30 0.00 35.97 3.91
5527 5690 3.227276 CCGGCGAGGGTAGATGCT 61.227 66.667 9.30 0.00 35.97 3.79
5528 5691 2.100879 ATTCCGGCGAGGGTAGATGC 62.101 60.000 9.30 0.00 41.52 3.91
5529 5692 1.254026 TATTCCGGCGAGGGTAGATG 58.746 55.000 9.30 0.00 41.52 2.90
5530 5693 1.617357 GTTATTCCGGCGAGGGTAGAT 59.383 52.381 9.30 0.00 41.52 1.98
5531 5694 1.035139 GTTATTCCGGCGAGGGTAGA 58.965 55.000 9.30 0.00 41.52 2.59
5532 5695 0.033090 GGTTATTCCGGCGAGGGTAG 59.967 60.000 9.30 0.00 41.52 3.18
5533 5696 0.397535 AGGTTATTCCGGCGAGGGTA 60.398 55.000 9.30 0.00 41.99 3.69
5534 5697 0.397535 TAGGTTATTCCGGCGAGGGT 60.398 55.000 9.30 0.00 41.99 4.34
5535 5698 0.033090 GTAGGTTATTCCGGCGAGGG 59.967 60.000 9.30 0.00 41.99 4.30
5536 5699 0.748450 TGTAGGTTATTCCGGCGAGG 59.252 55.000 9.30 0.00 41.99 4.63
5537 5700 1.868519 GCTGTAGGTTATTCCGGCGAG 60.869 57.143 9.30 0.00 41.99 5.03
5538 5701 0.103572 GCTGTAGGTTATTCCGGCGA 59.896 55.000 9.30 0.00 41.99 5.54
5539 5702 0.878961 GGCTGTAGGTTATTCCGGCG 60.879 60.000 0.00 0.00 41.99 6.46
5540 5703 0.179468 TGGCTGTAGGTTATTCCGGC 59.821 55.000 0.00 0.00 41.99 6.13
5541 5704 2.285977 GTTGGCTGTAGGTTATTCCGG 58.714 52.381 0.00 0.00 41.99 5.14
5542 5705 2.980568 TGTTGGCTGTAGGTTATTCCG 58.019 47.619 0.00 0.00 41.99 4.30
5543 5706 4.515567 GCTATGTTGGCTGTAGGTTATTCC 59.484 45.833 0.00 0.00 0.00 3.01
5544 5707 5.123227 TGCTATGTTGGCTGTAGGTTATTC 58.877 41.667 0.00 0.00 0.00 1.75
5545 5708 5.110814 TGCTATGTTGGCTGTAGGTTATT 57.889 39.130 0.00 0.00 0.00 1.40
5546 5709 4.164221 ACTGCTATGTTGGCTGTAGGTTAT 59.836 41.667 0.00 0.00 39.42 1.89
5547 5710 3.517901 ACTGCTATGTTGGCTGTAGGTTA 59.482 43.478 0.00 0.00 39.42 2.85
5548 5711 2.305927 ACTGCTATGTTGGCTGTAGGTT 59.694 45.455 0.00 0.00 39.42 3.50
5549 5712 1.909302 ACTGCTATGTTGGCTGTAGGT 59.091 47.619 0.00 0.00 39.42 3.08
5550 5713 2.698855 ACTGCTATGTTGGCTGTAGG 57.301 50.000 0.00 0.00 39.42 3.18
5551 5714 5.445939 CGTAAAACTGCTATGTTGGCTGTAG 60.446 44.000 0.00 0.00 40.08 2.74
5552 5715 4.390603 CGTAAAACTGCTATGTTGGCTGTA 59.609 41.667 0.00 0.00 40.08 2.74
5553 5716 3.188460 CGTAAAACTGCTATGTTGGCTGT 59.812 43.478 0.00 0.00 42.11 4.40
5554 5717 3.188460 ACGTAAAACTGCTATGTTGGCTG 59.812 43.478 0.00 0.00 35.32 4.85
5555 5718 3.408634 ACGTAAAACTGCTATGTTGGCT 58.591 40.909 0.00 0.00 0.00 4.75
5556 5719 3.435671 AGACGTAAAACTGCTATGTTGGC 59.564 43.478 0.00 0.00 0.00 4.52
5557 5720 5.867716 ACTAGACGTAAAACTGCTATGTTGG 59.132 40.000 0.00 0.00 0.00 3.77
5558 5721 6.183360 CCACTAGACGTAAAACTGCTATGTTG 60.183 42.308 0.00 0.00 0.00 3.33
5559 5722 5.867716 CCACTAGACGTAAAACTGCTATGTT 59.132 40.000 0.00 0.00 0.00 2.71
5560 5723 5.408356 CCACTAGACGTAAAACTGCTATGT 58.592 41.667 0.00 0.00 0.00 2.29
5561 5724 4.267928 GCCACTAGACGTAAAACTGCTATG 59.732 45.833 0.00 0.00 0.00 2.23
5562 5725 4.081862 TGCCACTAGACGTAAAACTGCTAT 60.082 41.667 0.00 0.00 0.00 2.97
5563 5726 3.256383 TGCCACTAGACGTAAAACTGCTA 59.744 43.478 0.00 0.00 0.00 3.49
5564 5727 2.036733 TGCCACTAGACGTAAAACTGCT 59.963 45.455 0.00 0.00 0.00 4.24
5565 5728 2.409975 TGCCACTAGACGTAAAACTGC 58.590 47.619 0.00 0.00 0.00 4.40
5566 5729 3.805422 TGTTGCCACTAGACGTAAAACTG 59.195 43.478 0.00 0.00 0.00 3.16
5567 5730 4.062677 TGTTGCCACTAGACGTAAAACT 57.937 40.909 0.00 0.00 0.00 2.66
5568 5731 4.799419 TTGTTGCCACTAGACGTAAAAC 57.201 40.909 0.00 0.00 0.00 2.43
5569 5732 4.260866 GCTTTGTTGCCACTAGACGTAAAA 60.261 41.667 0.00 0.00 0.00 1.52
5570 5733 3.249080 GCTTTGTTGCCACTAGACGTAAA 59.751 43.478 0.00 0.00 0.00 2.01
5571 5734 2.803956 GCTTTGTTGCCACTAGACGTAA 59.196 45.455 0.00 0.00 0.00 3.18
5572 5735 2.224090 TGCTTTGTTGCCACTAGACGTA 60.224 45.455 0.00 0.00 0.00 3.57
5573 5736 1.226746 GCTTTGTTGCCACTAGACGT 58.773 50.000 0.00 0.00 0.00 4.34
5574 5737 1.225855 TGCTTTGTTGCCACTAGACG 58.774 50.000 0.00 0.00 0.00 4.18
5575 5738 2.813754 TGATGCTTTGTTGCCACTAGAC 59.186 45.455 0.00 0.00 0.00 2.59
5576 5739 3.138884 TGATGCTTTGTTGCCACTAGA 57.861 42.857 0.00 0.00 0.00 2.43
5577 5740 3.192001 ACATGATGCTTTGTTGCCACTAG 59.808 43.478 0.00 0.00 0.00 2.57
5578 5741 3.156293 ACATGATGCTTTGTTGCCACTA 58.844 40.909 0.00 0.00 0.00 2.74
5579 5742 1.965643 ACATGATGCTTTGTTGCCACT 59.034 42.857 0.00 0.00 0.00 4.00
5580 5743 2.331194 GACATGATGCTTTGTTGCCAC 58.669 47.619 0.00 0.00 0.00 5.01
5581 5744 1.273048 GGACATGATGCTTTGTTGCCA 59.727 47.619 0.00 0.00 0.00 4.92
5582 5745 1.273048 TGGACATGATGCTTTGTTGCC 59.727 47.619 0.00 0.00 0.00 4.52
5583 5746 2.728690 TGGACATGATGCTTTGTTGC 57.271 45.000 0.00 0.00 0.00 4.17
5584 5747 3.742369 GGTTTGGACATGATGCTTTGTTG 59.258 43.478 0.00 0.00 0.00 3.33
5585 5748 3.387374 TGGTTTGGACATGATGCTTTGTT 59.613 39.130 0.00 0.00 0.00 2.83
5586 5749 2.964464 TGGTTTGGACATGATGCTTTGT 59.036 40.909 0.00 0.00 0.00 2.83
5587 5750 3.663995 TGGTTTGGACATGATGCTTTG 57.336 42.857 0.00 0.00 0.00 2.77
5588 5751 4.895668 ATTGGTTTGGACATGATGCTTT 57.104 36.364 0.00 0.00 0.00 3.51
5589 5752 4.895668 AATTGGTTTGGACATGATGCTT 57.104 36.364 0.00 0.00 0.00 3.91
5590 5753 6.549433 AATAATTGGTTTGGACATGATGCT 57.451 33.333 0.00 0.00 0.00 3.79
5591 5754 7.264221 TGTAATAATTGGTTTGGACATGATGC 58.736 34.615 0.00 0.00 0.00 3.91
5592 5755 8.685427 TCTGTAATAATTGGTTTGGACATGATG 58.315 33.333 0.00 0.00 0.00 3.07
5593 5756 8.821686 TCTGTAATAATTGGTTTGGACATGAT 57.178 30.769 0.00 0.00 0.00 2.45
5594 5757 7.339212 CCTCTGTAATAATTGGTTTGGACATGA 59.661 37.037 0.00 0.00 0.00 3.07
5595 5758 7.122650 ACCTCTGTAATAATTGGTTTGGACATG 59.877 37.037 0.00 0.00 0.00 3.21
5596 5759 7.182060 ACCTCTGTAATAATTGGTTTGGACAT 58.818 34.615 0.00 0.00 0.00 3.06
5597 5760 6.548321 ACCTCTGTAATAATTGGTTTGGACA 58.452 36.000 0.00 0.00 0.00 4.02
5598 5761 6.095021 GGACCTCTGTAATAATTGGTTTGGAC 59.905 42.308 0.00 0.00 0.00 4.02
5599 5762 6.184789 GGACCTCTGTAATAATTGGTTTGGA 58.815 40.000 0.00 0.00 0.00 3.53
5600 5763 5.949354 TGGACCTCTGTAATAATTGGTTTGG 59.051 40.000 0.00 0.00 0.00 3.28
5601 5764 7.040062 TGTTGGACCTCTGTAATAATTGGTTTG 60.040 37.037 0.00 0.00 0.00 2.93
5602 5765 7.007723 TGTTGGACCTCTGTAATAATTGGTTT 58.992 34.615 0.00 0.00 0.00 3.27
5603 5766 6.548321 TGTTGGACCTCTGTAATAATTGGTT 58.452 36.000 0.00 0.00 0.00 3.67
5604 5767 6.134535 TGTTGGACCTCTGTAATAATTGGT 57.865 37.500 0.00 0.00 0.00 3.67
5605 5768 5.590259 CCTGTTGGACCTCTGTAATAATTGG 59.410 44.000 0.00 0.00 34.57 3.16
5606 5769 6.414732 TCCTGTTGGACCTCTGTAATAATTG 58.585 40.000 0.00 0.00 37.46 2.32
5607 5770 6.636454 TCCTGTTGGACCTCTGTAATAATT 57.364 37.500 0.00 0.00 37.46 1.40
5608 5771 6.443849 TCTTCCTGTTGGACCTCTGTAATAAT 59.556 38.462 0.00 0.00 43.06 1.28
5609 5772 5.783360 TCTTCCTGTTGGACCTCTGTAATAA 59.217 40.000 0.00 0.00 43.06 1.40
5610 5773 5.338632 TCTTCCTGTTGGACCTCTGTAATA 58.661 41.667 0.00 0.00 43.06 0.98
5611 5774 4.168101 TCTTCCTGTTGGACCTCTGTAAT 58.832 43.478 0.00 0.00 43.06 1.89
5612 5775 3.583228 TCTTCCTGTTGGACCTCTGTAA 58.417 45.455 0.00 0.00 43.06 2.41
5613 5776 3.254093 TCTTCCTGTTGGACCTCTGTA 57.746 47.619 0.00 0.00 43.06 2.74
5614 5777 2.103153 TCTTCCTGTTGGACCTCTGT 57.897 50.000 0.00 0.00 43.06 3.41
5615 5778 3.406764 CTTTCTTCCTGTTGGACCTCTG 58.593 50.000 0.00 0.00 43.06 3.35
5616 5779 2.373502 CCTTTCTTCCTGTTGGACCTCT 59.626 50.000 0.00 0.00 43.06 3.69
5617 5780 2.372172 TCCTTTCTTCCTGTTGGACCTC 59.628 50.000 0.00 0.00 43.06 3.85
5618 5781 2.418669 TCCTTTCTTCCTGTTGGACCT 58.581 47.619 0.00 0.00 43.06 3.85
5619 5782 2.951229 TCCTTTCTTCCTGTTGGACC 57.049 50.000 0.00 0.00 43.06 4.46
5620 5783 3.003378 CGTTTCCTTTCTTCCTGTTGGAC 59.997 47.826 0.00 0.00 43.06 4.02
5621 5784 3.118186 TCGTTTCCTTTCTTCCTGTTGGA 60.118 43.478 0.00 0.00 41.36 3.53
5622 5785 3.211045 TCGTTTCCTTTCTTCCTGTTGG 58.789 45.455 0.00 0.00 0.00 3.77
5623 5786 4.574828 TCTTCGTTTCCTTTCTTCCTGTTG 59.425 41.667 0.00 0.00 0.00 3.33
5624 5787 4.777463 TCTTCGTTTCCTTTCTTCCTGTT 58.223 39.130 0.00 0.00 0.00 3.16
5625 5788 4.417426 TCTTCGTTTCCTTTCTTCCTGT 57.583 40.909 0.00 0.00 0.00 4.00
5626 5789 5.057149 TCTTCTTCGTTTCCTTTCTTCCTG 58.943 41.667 0.00 0.00 0.00 3.86
5627 5790 5.291905 TCTTCTTCGTTTCCTTTCTTCCT 57.708 39.130 0.00 0.00 0.00 3.36
5628 5791 5.106515 CCATCTTCTTCGTTTCCTTTCTTCC 60.107 44.000 0.00 0.00 0.00 3.46
5629 5792 5.701290 TCCATCTTCTTCGTTTCCTTTCTTC 59.299 40.000 0.00 0.00 0.00 2.87
5630 5793 5.621193 TCCATCTTCTTCGTTTCCTTTCTT 58.379 37.500 0.00 0.00 0.00 2.52
5631 5794 5.228945 TCCATCTTCTTCGTTTCCTTTCT 57.771 39.130 0.00 0.00 0.00 2.52
5632 5795 5.877564 AGATCCATCTTCTTCGTTTCCTTTC 59.122 40.000 0.00 0.00 31.97 2.62
5633 5796 5.810095 AGATCCATCTTCTTCGTTTCCTTT 58.190 37.500 0.00 0.00 31.97 3.11
5634 5797 5.428184 AGATCCATCTTCTTCGTTTCCTT 57.572 39.130 0.00 0.00 31.97 3.36
5635 5798 6.546428 TTAGATCCATCTTCTTCGTTTCCT 57.454 37.500 0.00 0.00 38.32 3.36
5636 5799 7.793927 ATTTAGATCCATCTTCTTCGTTTCC 57.206 36.000 0.00 0.00 38.32 3.13
5652 5815 2.237392 CCCTGGGGATCGGATTTAGATC 59.763 54.545 4.27 0.00 42.68 2.75
5653 5816 2.158004 TCCCTGGGGATCGGATTTAGAT 60.158 50.000 14.00 0.00 39.76 1.98
5654 5817 1.222039 TCCCTGGGGATCGGATTTAGA 59.778 52.381 14.00 0.00 39.76 2.10
5655 5818 1.729586 TCCCTGGGGATCGGATTTAG 58.270 55.000 14.00 0.00 39.76 1.85
5656 5819 3.981542 TCCCTGGGGATCGGATTTA 57.018 52.632 14.00 0.00 39.76 1.40
5657 5820 4.851784 TCCCTGGGGATCGGATTT 57.148 55.556 14.00 0.00 39.76 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.