Multiple sequence alignment - TraesCS5A01G151400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G151400 chr5A 100.000 5873 0 0 1 5873 328812134 328806262 0.000000e+00 10846.0
1 TraesCS5A01G151400 chr5A 96.857 350 6 3 5347 5693 689723942 689723595 1.100000e-161 580.0
2 TraesCS5A01G151400 chr5A 94.857 175 4 1 3455 3624 396219424 396219250 9.700000e-68 268.0
3 TraesCS5A01G151400 chr5A 85.116 215 24 5 1513 1723 19541872 19541662 4.610000e-51 213.0
4 TraesCS5A01G151400 chr5A 87.368 190 17 5 3444 3632 536678594 536678411 1.660000e-50 211.0
5 TraesCS5A01G151400 chr5D 89.504 3287 177 73 263 3458 244629465 244626256 0.000000e+00 4004.0
6 TraesCS5A01G151400 chr5D 97.218 1438 36 3 3623 5056 244626261 244624824 0.000000e+00 2431.0
7 TraesCS5A01G151400 chr5D 84.186 215 26 5 1513 1723 28881833 28881623 9.980000e-48 202.0
8 TraesCS5A01G151400 chr5D 86.316 190 16 7 3455 3642 287828508 287828327 1.290000e-46 198.0
9 TraesCS5A01G151400 chr5D 86.559 186 15 7 3445 3628 135648425 135648248 4.640000e-46 196.0
10 TraesCS5A01G151400 chr5B 89.038 2764 169 54 38 2747 278018586 278015903 0.000000e+00 3302.0
11 TraesCS5A01G151400 chr5B 96.054 1419 44 5 3626 5032 278013932 278012514 0.000000e+00 2300.0
12 TraesCS5A01G151400 chr5B 97.879 330 5 1 5363 5690 700523735 700524064 2.370000e-158 569.0
13 TraesCS5A01G151400 chr5B 89.572 374 18 5 3103 3461 278014300 278013933 6.940000e-124 455.0
14 TraesCS5A01G151400 chr5B 92.744 317 14 4 2742 3054 278014986 278014675 3.230000e-122 449.0
15 TraesCS5A01G151400 chr5B 89.017 173 12 5 3453 3624 615198293 615198127 2.140000e-49 207.0
16 TraesCS5A01G151400 chr1A 91.088 662 43 3 5053 5699 554820249 554819589 0.000000e+00 881.0
17 TraesCS5A01G151400 chr6A 91.104 652 43 3 5053 5690 84362606 84363256 0.000000e+00 869.0
18 TraesCS5A01G151400 chr6A 89.080 174 11 6 3452 3624 78517538 78517704 5.960000e-50 209.0
19 TraesCS5A01G151400 chr6A 77.181 149 34 0 1507 1655 537866169 537866317 2.920000e-13 87.9
20 TraesCS5A01G151400 chr6B 94.091 440 10 4 5253 5690 3584125 3584550 0.000000e+00 654.0
21 TraesCS5A01G151400 chr6B 92.254 426 17 4 5049 5472 3583826 3584237 1.820000e-164 590.0
22 TraesCS5A01G151400 chr6B 96.830 347 8 2 5349 5693 55680955 55680610 1.420000e-160 577.0
23 TraesCS5A01G151400 chr6B 92.973 185 13 0 5689 5873 3586874 3587058 2.700000e-68 270.0
24 TraesCS5A01G151400 chr6B 73.516 219 50 6 1510 1724 585246186 585246400 6.310000e-10 76.8
25 TraesCS5A01G151400 chr4B 97.093 344 7 2 5349 5690 253774731 253775073 1.420000e-160 577.0
26 TraesCS5A01G151400 chr4B 92.973 185 13 0 5689 5873 253777388 253777572 2.700000e-68 270.0
27 TraesCS5A01G151400 chr4B 85.514 214 27 4 1513 1724 412107941 412107730 2.760000e-53 220.0
28 TraesCS5A01G151400 chr3D 76.881 1090 202 30 3813 4871 454746683 454747753 6.600000e-159 571.0
29 TraesCS5A01G151400 chr3D 91.824 318 25 1 5057 5374 349859880 349859564 5.400000e-120 442.0
30 TraesCS5A01G151400 chr3D 93.514 185 12 0 5689 5873 349857010 349856826 5.800000e-70 276.0
31 TraesCS5A01G151400 chr3D 85.047 214 32 0 1513 1726 454746189 454746402 9.910000e-53 219.0
32 TraesCS5A01G151400 chr3A 96.802 344 7 2 5349 5690 727534454 727534795 6.600000e-159 571.0
33 TraesCS5A01G151400 chr3A 79.607 662 109 17 4220 4871 596795384 596796029 8.970000e-123 451.0
34 TraesCS5A01G151400 chr3A 85.116 215 32 0 1513 1727 596794463 596794677 2.760000e-53 220.0
35 TraesCS5A01G151400 chr3A 87.912 182 6 6 3452 3628 632028880 632028710 3.590000e-47 200.0
36 TraesCS5A01G151400 chr2B 95.184 353 15 1 5349 5699 568826147 568825795 1.850000e-154 556.0
37 TraesCS5A01G151400 chr2B 89.205 176 12 5 3453 3627 357152327 357152496 4.610000e-51 213.0
38 TraesCS5A01G151400 chr4A 91.436 397 30 3 5061 5454 510637262 510636867 5.180000e-150 542.0
39 TraesCS5A01G151400 chr4A 85.047 214 28 4 1513 1724 139545394 139545605 1.280000e-51 215.0
40 TraesCS5A01G151400 chr4A 89.080 174 11 6 3452 3624 600054226 600054392 5.960000e-50 209.0
41 TraesCS5A01G151400 chr4A 79.554 269 49 3 3827 4092 139546228 139546493 2.790000e-43 187.0
42 TraesCS5A01G151400 chr1D 92.767 318 22 1 5057 5374 225558135 225558451 5.360000e-125 459.0
43 TraesCS5A01G151400 chr1D 92.767 318 22 1 5057 5374 349546144 349546460 5.360000e-125 459.0
44 TraesCS5A01G151400 chr1D 92.973 185 13 0 5689 5873 349549022 349549206 2.700000e-68 270.0
45 TraesCS5A01G151400 chr1D 91.892 185 15 0 5689 5873 225560986 225561170 5.840000e-65 259.0
46 TraesCS5A01G151400 chr3B 79.789 663 106 18 4220 4871 597546513 597547158 1.930000e-124 457.0
47 TraesCS5A01G151400 chr3B 92.476 319 23 1 5056 5374 778237429 778237112 6.940000e-124 455.0
48 TraesCS5A01G151400 chr3B 85.116 215 32 0 1513 1727 597545598 597545812 2.760000e-53 220.0
49 TraesCS5A01G151400 chr7D 91.615 322 26 1 5053 5374 619381239 619380919 1.500000e-120 444.0
50 TraesCS5A01G151400 chr7D 93.514 185 12 0 5689 5873 619369396 619369212 5.800000e-70 276.0
51 TraesCS5A01G151400 chr2D 91.159 328 26 3 5048 5374 568726016 568725691 5.400000e-120 442.0
52 TraesCS5A01G151400 chr2D 91.892 185 15 0 5689 5873 568723131 568722947 5.840000e-65 259.0
53 TraesCS5A01G151400 chr2A 95.135 185 9 0 5689 5873 524951174 524950990 5.760000e-75 292.0
54 TraesCS5A01G151400 chr6D 92.432 185 14 0 5689 5873 433716522 433716338 1.250000e-66 265.0
55 TraesCS5A01G151400 chr6D 77.027 148 34 0 1508 1655 391687687 391687834 1.050000e-12 86.1
56 TraesCS5A01G151400 chr4D 85.047 214 28 4 1513 1724 334118573 334118362 1.280000e-51 215.0
57 TraesCS5A01G151400 chr4D 79.554 269 49 3 3827 4092 334117682 334117417 2.790000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G151400 chr5A 328806262 328812134 5872 True 10846.000000 10846 100.0000 1 5873 1 chr5A.!!$R2 5872
1 TraesCS5A01G151400 chr5D 244624824 244629465 4641 True 3217.500000 4004 93.3610 263 5056 2 chr5D.!!$R4 4793
2 TraesCS5A01G151400 chr5B 278012514 278018586 6072 True 1626.500000 3302 91.8520 38 5032 4 chr5B.!!$R2 4994
3 TraesCS5A01G151400 chr1A 554819589 554820249 660 True 881.000000 881 91.0880 5053 5699 1 chr1A.!!$R1 646
4 TraesCS5A01G151400 chr6A 84362606 84363256 650 False 869.000000 869 91.1040 5053 5690 1 chr6A.!!$F2 637
5 TraesCS5A01G151400 chr6B 3583826 3587058 3232 False 504.666667 654 93.1060 5049 5873 3 chr6B.!!$F2 824
6 TraesCS5A01G151400 chr4B 253774731 253777572 2841 False 423.500000 577 95.0330 5349 5873 2 chr4B.!!$F1 524
7 TraesCS5A01G151400 chr3D 454746189 454747753 1564 False 395.000000 571 80.9640 1513 4871 2 chr3D.!!$F1 3358
8 TraesCS5A01G151400 chr3D 349856826 349859880 3054 True 359.000000 442 92.6690 5057 5873 2 chr3D.!!$R1 816
9 TraesCS5A01G151400 chr3A 596794463 596796029 1566 False 335.500000 451 82.3615 1513 4871 2 chr3A.!!$F2 3358
10 TraesCS5A01G151400 chr4A 139545394 139546493 1099 False 201.000000 215 82.3005 1513 4092 2 chr4A.!!$F2 2579
11 TraesCS5A01G151400 chr1D 349546144 349549206 3062 False 364.500000 459 92.8700 5057 5873 2 chr1D.!!$F2 816
12 TraesCS5A01G151400 chr1D 225558135 225561170 3035 False 359.000000 459 92.3295 5057 5873 2 chr1D.!!$F1 816
13 TraesCS5A01G151400 chr3B 597545598 597547158 1560 False 338.500000 457 82.4525 1513 4871 2 chr3B.!!$F1 3358
14 TraesCS5A01G151400 chr2D 568722947 568726016 3069 True 350.500000 442 91.5255 5048 5873 2 chr2D.!!$R1 825
15 TraesCS5A01G151400 chr4D 334117417 334118573 1156 True 201.000000 215 82.3005 1513 4092 2 chr4D.!!$R1 2579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.039618 AACCCATCGATGCCCTTTGT 59.960 50.000 20.25 6.51 0.00 2.83 F
1237 1316 0.176680 CACTAATGTCTGGCGGCTCT 59.823 55.000 11.43 0.00 0.00 4.09 F
1250 1329 0.179089 CGGCTCTGAGTTCTGATGGG 60.179 60.000 6.53 0.00 0.00 4.00 F
2110 2269 0.393808 TGGAAGGACCGGCTTAATGC 60.394 55.000 0.00 0.00 42.61 3.56 F
2475 2635 1.022735 TTGCTTTTCCCGCGTGTTAA 58.977 45.000 4.92 0.00 0.00 2.01 F
2743 2905 1.947456 CATGACATGCACATGCTAGCT 59.053 47.619 17.23 0.00 42.39 3.32 F
2915 4002 2.093306 TGTTCCATGTCTAGTTGGCG 57.907 50.000 0.00 0.00 32.80 5.69 F
4335 6180 0.598065 GCATCAACAACGCCTCCTTT 59.402 50.000 0.00 0.00 0.00 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1971 2123 0.830648 TATGCTGTGCACTAGGTCCC 59.169 55.000 19.41 2.2 43.04 4.46 R
2091 2250 0.393808 GCATTAAGCCGGTCCTTCCA 60.394 55.000 1.90 0.0 37.23 3.53 R
3110 4524 0.398318 ACGCTTTCAGGGAGCTCTTT 59.602 50.000 14.64 0.0 37.99 2.52 R
3611 5040 0.329596 ACCGTACTACTCCCTCCGTT 59.670 55.000 0.00 0.0 0.00 4.44 R
3612 5041 1.134371 GTACCGTACTACTCCCTCCGT 60.134 57.143 1.14 0.0 0.00 4.69 R
3614 5043 1.212935 TGGTACCGTACTACTCCCTCC 59.787 57.143 7.57 0.0 0.00 4.30 R
4623 6468 1.480219 CGGTAGCGGCATCGAAGTTC 61.480 60.000 6.39 0.0 39.00 3.01 R
5745 10414 1.078426 TAGAGGAAAAGCTGCGGGC 60.078 57.895 0.00 0.0 42.19 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.597663 CGTTTAGAACCCATCGATGCC 59.402 52.381 20.25 8.32 0.00 4.40
21 22 1.947456 GTTTAGAACCCATCGATGCCC 59.053 52.381 20.25 7.98 0.00 5.36
22 23 1.507140 TTAGAACCCATCGATGCCCT 58.493 50.000 20.25 14.25 0.00 5.19
23 24 1.507140 TAGAACCCATCGATGCCCTT 58.493 50.000 20.25 9.70 0.00 3.95
24 25 0.625849 AGAACCCATCGATGCCCTTT 59.374 50.000 20.25 9.02 0.00 3.11
25 26 0.740737 GAACCCATCGATGCCCTTTG 59.259 55.000 20.25 5.03 0.00 2.77
26 27 0.039618 AACCCATCGATGCCCTTTGT 59.960 50.000 20.25 6.51 0.00 2.83
27 28 0.394352 ACCCATCGATGCCCTTTGTC 60.394 55.000 20.25 0.00 0.00 3.18
28 29 0.394216 CCCATCGATGCCCTTTGTCA 60.394 55.000 20.25 0.00 0.00 3.58
29 30 0.734889 CCATCGATGCCCTTTGTCAC 59.265 55.000 20.25 0.00 0.00 3.67
30 31 1.679944 CCATCGATGCCCTTTGTCACT 60.680 52.381 20.25 0.00 0.00 3.41
31 32 2.419990 CCATCGATGCCCTTTGTCACTA 60.420 50.000 20.25 0.00 0.00 2.74
32 33 2.380084 TCGATGCCCTTTGTCACTAC 57.620 50.000 0.00 0.00 0.00 2.73
33 34 1.899814 TCGATGCCCTTTGTCACTACT 59.100 47.619 0.00 0.00 0.00 2.57
34 35 2.301870 TCGATGCCCTTTGTCACTACTT 59.698 45.455 0.00 0.00 0.00 2.24
35 36 3.512329 TCGATGCCCTTTGTCACTACTTA 59.488 43.478 0.00 0.00 0.00 2.24
36 37 3.617263 CGATGCCCTTTGTCACTACTTAC 59.383 47.826 0.00 0.00 0.00 2.34
42 43 7.228590 TGCCCTTTGTCACTACTTACTATTTT 58.771 34.615 0.00 0.00 0.00 1.82
70 71 6.225981 TGTGCATCACATCTACTATGTTCT 57.774 37.500 0.00 0.00 39.62 3.01
71 72 6.643388 TGTGCATCACATCTACTATGTTCTT 58.357 36.000 0.00 0.00 39.62 2.52
73 74 7.064966 TGTGCATCACATCTACTATGTTCTTTG 59.935 37.037 0.00 0.00 39.62 2.77
74 75 6.037500 TGCATCACATCTACTATGTTCTTTGC 59.962 38.462 0.00 0.00 0.00 3.68
75 76 6.259608 GCATCACATCTACTATGTTCTTTGCT 59.740 38.462 0.00 0.00 0.00 3.91
95 96 5.470368 TGCTAAGTAGTACAAGCAACAGAG 58.530 41.667 21.46 0.95 41.74 3.35
115 116 6.068010 CAGAGGAAGACCATCTAGATGTACT 58.932 44.000 27.03 21.81 37.11 2.73
116 117 7.147284 ACAGAGGAAGACCATCTAGATGTACTA 60.147 40.741 27.03 0.00 37.11 1.82
117 118 7.390440 CAGAGGAAGACCATCTAGATGTACTAG 59.610 44.444 27.03 15.84 42.82 2.57
119 120 8.277720 AGGAAGACCATCTAGATGTACTAGTA 57.722 38.462 27.03 0.00 42.47 1.82
120 121 8.158789 AGGAAGACCATCTAGATGTACTAGTAC 58.841 40.741 27.03 23.58 42.47 2.73
121 122 7.937942 GGAAGACCATCTAGATGTACTAGTACA 59.062 40.741 32.18 32.18 41.81 2.90
138 139 3.440173 AGTACATTTCGCCTCACAAATGG 59.560 43.478 9.10 0.00 42.13 3.16
151 152 4.148079 TCACAAATGGCAATGGTCAAGTA 58.852 39.130 8.29 0.00 28.67 2.24
153 154 4.685628 CACAAATGGCAATGGTCAAGTAAC 59.314 41.667 8.29 0.00 28.67 2.50
160 161 4.621034 GGCAATGGTCAAGTAACGAATTTG 59.379 41.667 0.00 0.00 0.00 2.32
174 175 8.303876 AGTAACGAATTTGCAGTATCCAAAAAT 58.696 29.630 0.00 0.00 35.97 1.82
177 178 7.795859 ACGAATTTGCAGTATCCAAAAATTTG 58.204 30.769 0.00 0.00 37.51 2.32
178 179 6.737750 CGAATTTGCAGTATCCAAAAATTTGC 59.262 34.615 0.29 0.00 35.97 3.68
185 186 2.996249 TCCAAAAATTTGCAGGCACA 57.004 40.000 0.00 0.00 36.86 4.57
190 191 1.580815 AAATTTGCAGGCACAAACCG 58.419 45.000 7.72 0.00 42.01 4.44
201 202 2.215196 GCACAAACCGAACAACTCCTA 58.785 47.619 0.00 0.00 0.00 2.94
208 209 2.171027 ACCGAACAACTCCTACCAAACA 59.829 45.455 0.00 0.00 0.00 2.83
233 234 8.573035 CAAAAGACCAATTAACCTAGCAGTAAA 58.427 33.333 0.00 0.00 0.00 2.01
249 250 4.630111 CAGTAAACACCCACGGTTAACTA 58.370 43.478 5.42 0.00 31.02 2.24
250 251 4.687483 CAGTAAACACCCACGGTTAACTAG 59.313 45.833 5.42 2.96 31.02 2.57
251 252 3.843893 AAACACCCACGGTTAACTAGT 57.156 42.857 5.42 3.60 31.02 2.57
252 253 4.953940 AAACACCCACGGTTAACTAGTA 57.046 40.909 5.42 0.00 31.02 1.82
253 254 4.953940 AACACCCACGGTTAACTAGTAA 57.046 40.909 5.42 0.00 31.02 2.24
254 255 4.525912 ACACCCACGGTTAACTAGTAAG 57.474 45.455 5.42 4.19 31.02 2.34
255 256 3.897505 ACACCCACGGTTAACTAGTAAGT 59.102 43.478 5.42 4.73 32.51 2.24
256 257 4.344968 ACACCCACGGTTAACTAGTAAGTT 59.655 41.667 5.42 0.00 40.86 2.66
260 261 6.267699 ACCCACGGTTAACTAGTAAGTTAGTT 59.732 38.462 5.42 4.14 46.28 2.24
314 315 7.937649 CATGGATGCAAAGAGAAAGATTCATA 58.062 34.615 0.00 0.00 0.00 2.15
480 481 7.555306 ACGAAAGCTAAGGATCCTTTTAATC 57.445 36.000 31.45 20.30 37.47 1.75
636 655 3.004944 TCACAACCGCCTTTGTTTAATCC 59.995 43.478 0.00 0.00 37.62 3.01
637 656 3.005367 CACAACCGCCTTTGTTTAATCCT 59.995 43.478 0.00 0.00 37.62 3.24
638 657 4.216687 CACAACCGCCTTTGTTTAATCCTA 59.783 41.667 0.00 0.00 37.62 2.94
713 739 0.676736 GCTGATCTCGGAAGGGTAGG 59.323 60.000 0.00 0.00 0.00 3.18
788 814 1.607628 GATGGAAGCATCATCACAGGC 59.392 52.381 8.44 0.00 40.35 4.85
853 879 4.354893 TCGGTAGGTAAGCCAAAAGAAA 57.645 40.909 0.00 0.00 37.19 2.52
867 896 6.006759 CCAAAAGAAAAGTTGGCAAACAAA 57.993 33.333 6.76 0.00 41.58 2.83
892 933 5.803020 AATTTACTCCTCAGAATCAACGC 57.197 39.130 0.00 0.00 0.00 4.84
893 934 3.953712 TTACTCCTCAGAATCAACGCA 57.046 42.857 0.00 0.00 0.00 5.24
901 950 4.400845 CTCAGAATCAACGCAGTCATTTG 58.599 43.478 0.00 0.00 45.00 2.32
914 971 2.819608 AGTCATTTGGATCAACCGGTTG 59.180 45.455 36.52 36.52 42.61 3.77
936 994 3.749665 TTGCTTTCCAATTCCAACCAG 57.250 42.857 0.00 0.00 0.00 4.00
955 1029 1.771255 AGAGAAACAAGTGGACTGCCT 59.229 47.619 0.00 0.00 34.31 4.75
956 1030 1.876156 GAGAAACAAGTGGACTGCCTG 59.124 52.381 0.00 0.00 34.31 4.85
957 1031 0.312102 GAAACAAGTGGACTGCCTGC 59.688 55.000 0.00 0.00 34.31 4.85
958 1032 1.109323 AAACAAGTGGACTGCCTGCC 61.109 55.000 0.00 0.00 34.31 4.85
959 1033 1.999634 AACAAGTGGACTGCCTGCCT 62.000 55.000 0.00 0.00 34.31 4.75
960 1034 1.970114 CAAGTGGACTGCCTGCCTG 60.970 63.158 0.00 0.00 34.31 4.85
961 1035 3.857309 AAGTGGACTGCCTGCCTGC 62.857 63.158 0.00 0.00 34.31 4.85
1026 1105 3.455990 TGCATTGCACACAAATCAAGT 57.544 38.095 7.38 0.00 39.77 3.16
1074 1153 1.079503 GTTTGGTCAGGATGTCGAGC 58.920 55.000 0.00 0.00 37.40 5.03
1155 1234 3.267860 GCGATCGCCAAGGAGCAG 61.268 66.667 29.48 0.00 34.56 4.24
1226 1305 6.127814 CCTTGTTGATGCAGATTCACTAATGT 60.128 38.462 0.00 0.00 0.00 2.71
1237 1316 0.176680 CACTAATGTCTGGCGGCTCT 59.823 55.000 11.43 0.00 0.00 4.09
1240 1319 0.461548 TAATGTCTGGCGGCTCTGAG 59.538 55.000 11.43 0.00 0.00 3.35
1250 1329 0.179089 CGGCTCTGAGTTCTGATGGG 60.179 60.000 6.53 0.00 0.00 4.00
1268 1347 1.544724 GGTGGTGTTGGTGCATATGT 58.455 50.000 4.29 0.00 0.00 2.29
1269 1348 1.202114 GGTGGTGTTGGTGCATATGTG 59.798 52.381 4.29 0.00 0.00 3.21
1270 1349 1.885887 GTGGTGTTGGTGCATATGTGT 59.114 47.619 4.29 0.00 0.00 3.72
1271 1350 1.885233 TGGTGTTGGTGCATATGTGTG 59.115 47.619 4.29 0.00 0.00 3.82
1453 1536 5.049612 ACTGGTACGTACGTCTCATCATATG 60.050 44.000 26.53 12.71 0.00 1.78
1501 1599 1.000506 CATGCTAATGGAGGCAATGGC 59.999 52.381 0.00 0.00 41.90 4.40
1506 1604 2.786512 AATGGAGGCAATGGCGTGGT 62.787 55.000 0.00 0.00 42.47 4.16
1851 1981 6.310197 TGTTGCACTTAACAAATTTTTGCAC 58.690 32.000 3.00 2.12 41.79 4.57
1852 1982 6.148480 TGTTGCACTTAACAAATTTTTGCACT 59.852 30.769 3.00 0.00 41.79 4.40
1853 1983 7.331934 TGTTGCACTTAACAAATTTTTGCACTA 59.668 29.630 3.00 0.00 41.79 2.74
1854 1984 8.334632 GTTGCACTTAACAAATTTTTGCACTAT 58.665 29.630 3.00 0.00 41.79 2.12
1855 1985 9.534565 TTGCACTTAACAAATTTTTGCACTATA 57.465 25.926 3.00 0.00 41.79 1.31
1856 1986 9.703892 TGCACTTAACAAATTTTTGCACTATAT 57.296 25.926 3.00 0.00 41.79 0.86
1869 1999 5.687770 TGCACTATATATTGCAATTGCGT 57.312 34.783 24.58 17.88 45.65 5.24
1870 2000 6.793492 TGCACTATATATTGCAATTGCGTA 57.207 33.333 24.58 19.35 45.65 4.42
1871 2001 7.195839 TGCACTATATATTGCAATTGCGTAA 57.804 32.000 24.58 15.07 45.65 3.18
1872 2002 7.815641 TGCACTATATATTGCAATTGCGTAAT 58.184 30.769 24.58 20.43 45.65 1.89
1873 2003 8.940952 TGCACTATATATTGCAATTGCGTAATA 58.059 29.630 24.58 21.74 45.65 0.98
1874 2004 9.210426 GCACTATATATTGCAATTGCGTAATAC 57.790 33.333 24.58 7.38 45.83 1.89
1878 2008 4.568152 ATTGCAATTGCGTAATACTCCC 57.432 40.909 24.58 0.00 45.83 4.30
1879 2009 3.275617 TGCAATTGCGTAATACTCCCT 57.724 42.857 24.58 0.00 45.83 4.20
1880 2010 3.616219 TGCAATTGCGTAATACTCCCTT 58.384 40.909 24.58 0.00 45.83 3.95
1881 2011 3.625764 TGCAATTGCGTAATACTCCCTTC 59.374 43.478 24.58 0.00 45.83 3.46
1882 2012 3.303132 GCAATTGCGTAATACTCCCTTCG 60.303 47.826 15.87 0.00 0.00 3.79
1883 2013 3.814005 ATTGCGTAATACTCCCTTCGT 57.186 42.857 0.00 0.00 0.00 3.85
1884 2014 3.598019 TTGCGTAATACTCCCTTCGTT 57.402 42.857 0.00 0.00 0.00 3.85
1971 2123 1.745232 TAGCATTGCCCTTTACACCG 58.255 50.000 4.70 0.00 0.00 4.94
2039 2192 1.009903 CGCGGTGTCGTACAATTGGA 61.010 55.000 10.83 0.00 38.89 3.53
2053 2212 4.000988 ACAATTGGAGTGTGTCGTATTCC 58.999 43.478 10.83 0.00 0.00 3.01
2060 2219 3.650139 AGTGTGTCGTATTCCAGTTGAC 58.350 45.455 0.00 0.00 0.00 3.18
2073 2232 7.876936 ATTCCAGTTGACGAAGACTACTATA 57.123 36.000 0.00 0.00 36.22 1.31
2074 2233 7.876936 TTCCAGTTGACGAAGACTACTATAT 57.123 36.000 0.00 0.00 36.22 0.86
2075 2234 8.969260 TTCCAGTTGACGAAGACTACTATATA 57.031 34.615 0.00 0.00 36.22 0.86
2076 2235 8.375608 TCCAGTTGACGAAGACTACTATATAC 57.624 38.462 0.00 0.00 36.22 1.47
2078 2237 8.838365 CCAGTTGACGAAGACTACTATATACTT 58.162 37.037 0.00 0.00 36.22 2.24
2079 2238 9.866936 CAGTTGACGAAGACTACTATATACTTC 57.133 37.037 0.00 0.00 36.22 3.01
2080 2239 9.610705 AGTTGACGAAGACTACTATATACTTCA 57.389 33.333 0.00 0.00 36.58 3.02
2102 2261 2.489938 TCATTTCTTGGAAGGACCGG 57.510 50.000 0.00 0.00 42.61 5.28
2110 2269 0.393808 TGGAAGGACCGGCTTAATGC 60.394 55.000 0.00 0.00 42.61 3.56
2112 2271 1.436983 GAAGGACCGGCTTAATGCGG 61.437 60.000 0.00 0.00 44.05 5.69
2169 2329 5.163364 TGGCAAATTCTAGCAAACAAAGGAA 60.163 36.000 0.00 0.00 0.00 3.36
2177 2337 4.935352 AGCAAACAAAGGAATTACTGCA 57.065 36.364 0.00 0.00 0.00 4.41
2198 2358 5.176590 TGCAAAAAGTTGTTGTGTTCACTTC 59.823 36.000 7.61 0.00 37.06 3.01
2208 2368 4.916983 TGTGTTCACTTCAAGGAATTGG 57.083 40.909 4.59 0.00 0.00 3.16
2221 2381 3.855689 GGAATTGGCATATTCCCGATG 57.144 47.619 21.17 0.00 45.16 3.84
2234 2394 1.837439 TCCCGATGACATAAGTTGCCT 59.163 47.619 0.00 0.00 0.00 4.75
2240 2400 6.349777 CCCGATGACATAAGTTGCCTTAAAAA 60.350 38.462 0.00 0.00 36.76 1.94
2276 2436 2.919971 GCTCTTCCAGCTGACGTTT 58.080 52.632 17.39 0.00 45.83 3.60
2316 2476 3.954200 TCTTGAAATAGGCAGTGATGCA 58.046 40.909 2.29 0.00 36.33 3.96
2334 2494 5.347635 TGATGCACGTACACAGAAACTAATC 59.652 40.000 0.00 0.00 0.00 1.75
2428 2588 2.603135 GATCCCGTGCAGTGCATTGC 62.603 60.000 25.76 25.76 41.91 3.56
2438 2598 2.030007 GCAGTGCATTGCTCCAAAGTAA 60.030 45.455 25.31 0.00 40.89 2.24
2475 2635 1.022735 TTGCTTTTCCCGCGTGTTAA 58.977 45.000 4.92 0.00 0.00 2.01
2590 2751 4.484236 TGCAATTTAGCACCGAAATTCAG 58.516 39.130 0.00 0.00 40.11 3.02
2593 2754 6.127758 TGCAATTTAGCACCGAAATTCAGTAT 60.128 34.615 0.00 0.00 40.11 2.12
2743 2905 1.947456 CATGACATGCACATGCTAGCT 59.053 47.619 17.23 0.00 42.39 3.32
2744 2906 2.985957 TGACATGCACATGCTAGCTA 57.014 45.000 17.23 2.58 42.39 3.32
2745 2907 2.830104 TGACATGCACATGCTAGCTAG 58.170 47.619 16.84 16.84 42.39 3.42
2842 3929 7.235079 TCAGATACTAGCACCTTTCTAGCTAT 58.765 38.462 0.00 0.00 39.83 2.97
2867 3954 8.667987 TCTTTCAAAAATATTCGGACAAATCG 57.332 30.769 0.00 0.00 0.00 3.34
2915 4002 2.093306 TGTTCCATGTCTAGTTGGCG 57.907 50.000 0.00 0.00 32.80 5.69
3016 4103 2.567985 TGTTCTCTCCAAACGGGTTTC 58.432 47.619 0.00 0.00 38.11 2.78
3023 4110 3.630312 TCTCCAAACGGGTTTCAAAGAAG 59.370 43.478 0.00 0.00 38.11 2.85
3026 4113 4.097286 TCCAAACGGGTTTCAAAGAAGAAG 59.903 41.667 0.00 0.00 38.11 2.85
3027 4114 4.097286 CCAAACGGGTTTCAAAGAAGAAGA 59.903 41.667 0.00 0.00 0.00 2.87
3028 4115 5.393678 CCAAACGGGTTTCAAAGAAGAAGAA 60.394 40.000 0.00 0.00 0.00 2.52
3049 4136 9.885934 GAAGAAAATCTTTGGAGAAGTACTTTC 57.114 33.333 10.02 9.05 36.73 2.62
3062 4171 8.178313 GGAGAAGTACTTTCAATATCTTGTTGC 58.822 37.037 10.02 0.00 38.31 4.17
3098 4208 6.500684 AGTCAACTTAATAGCCAACATGTG 57.499 37.500 0.00 0.00 0.00 3.21
3110 4524 3.747010 GCCAACATGTGATTGCATTCAAA 59.253 39.130 12.62 8.33 35.56 2.69
3142 4556 4.171005 CTGAAAGCGTGAGTCCGTAATTA 58.829 43.478 3.51 0.00 0.00 1.40
3161 4575 9.235087 CGTAATTACATAGATTCGCAATAAACG 57.765 33.333 15.67 0.00 0.00 3.60
3179 4593 8.491152 CAATAAACGGAGTCTCTAATTGCATAG 58.509 37.037 0.00 0.00 45.00 2.23
3180 4594 5.854010 AACGGAGTCTCTAATTGCATAGA 57.146 39.130 0.00 0.00 45.00 1.98
3181 4595 6.412362 AACGGAGTCTCTAATTGCATAGAT 57.588 37.500 0.00 0.00 45.00 1.98
3182 4596 7.526142 AACGGAGTCTCTAATTGCATAGATA 57.474 36.000 0.00 0.00 45.00 1.98
3461 4890 7.858498 AGAAGAGCTAGATAGATACTACTCCC 58.142 42.308 0.00 0.00 0.00 4.30
3462 4891 7.682890 AGAAGAGCTAGATAGATACTACTCCCT 59.317 40.741 0.00 0.00 0.00 4.20
3464 4893 6.386050 AGAGCTAGATAGATACTACTCCCTCC 59.614 46.154 0.00 0.00 0.00 4.30
3465 4894 5.129815 AGCTAGATAGATACTACTCCCTCCG 59.870 48.000 0.00 0.00 0.00 4.63
3466 4895 5.104817 GCTAGATAGATACTACTCCCTCCGT 60.105 48.000 0.00 0.00 0.00 4.69
3467 4896 5.846528 AGATAGATACTACTCCCTCCGTT 57.153 43.478 0.00 0.00 0.00 4.44
3468 4897 5.807909 AGATAGATACTACTCCCTCCGTTC 58.192 45.833 0.00 0.00 0.00 3.95
3469 4898 3.226682 AGATACTACTCCCTCCGTTCC 57.773 52.381 0.00 0.00 0.00 3.62
3470 4899 2.784682 AGATACTACTCCCTCCGTTCCT 59.215 50.000 0.00 0.00 0.00 3.36
3471 4900 3.979347 AGATACTACTCCCTCCGTTCCTA 59.021 47.826 0.00 0.00 0.00 2.94
3472 4901 4.414846 AGATACTACTCCCTCCGTTCCTAA 59.585 45.833 0.00 0.00 0.00 2.69
3473 4902 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
3474 4903 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
3475 4904 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
3476 4905 4.892345 ACTACTCCCTCCGTTCCTAAATAC 59.108 45.833 0.00 0.00 0.00 1.89
3477 4906 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
3478 4907 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
3479 4908 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
3480 4909 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
3481 4910 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
3482 4911 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
3483 4912 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
3484 4913 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
3485 4914 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
3486 4915 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
3487 4916 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
3488 4917 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
3489 4918 7.491696 CCGTTCCTAAATACTTGTCTTTCTAGG 59.508 40.741 0.00 0.00 0.00 3.02
3490 4919 7.010275 CGTTCCTAAATACTTGTCTTTCTAGGC 59.990 40.741 0.00 0.00 0.00 3.93
3491 4920 7.490657 TCCTAAATACTTGTCTTTCTAGGCA 57.509 36.000 0.00 0.00 33.22 4.75
3492 4921 8.090788 TCCTAAATACTTGTCTTTCTAGGCAT 57.909 34.615 0.00 0.00 35.56 4.40
3493 4922 8.548877 TCCTAAATACTTGTCTTTCTAGGCATT 58.451 33.333 0.00 0.00 35.56 3.56
3494 4923 9.178758 CCTAAATACTTGTCTTTCTAGGCATTT 57.821 33.333 0.00 0.00 35.56 2.32
3496 4925 8.635765 AAATACTTGTCTTTCTAGGCATTTCA 57.364 30.769 0.00 0.00 35.56 2.69
3497 4926 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
3498 4927 6.319141 ACTTGTCTTTCTAGGCATTTCAAC 57.681 37.500 0.00 0.00 35.56 3.18
3499 4928 5.827797 ACTTGTCTTTCTAGGCATTTCAACA 59.172 36.000 0.00 0.00 35.56 3.33
3500 4929 6.321181 ACTTGTCTTTCTAGGCATTTCAACAA 59.679 34.615 0.00 0.00 35.56 2.83
3501 4930 6.317789 TGTCTTTCTAGGCATTTCAACAAG 57.682 37.500 0.00 0.00 29.10 3.16
3502 4931 5.827797 TGTCTTTCTAGGCATTTCAACAAGT 59.172 36.000 0.00 0.00 29.10 3.16
3503 4932 6.145535 GTCTTTCTAGGCATTTCAACAAGTG 58.854 40.000 0.00 0.00 0.00 3.16
3504 4933 6.017109 GTCTTTCTAGGCATTTCAACAAGTGA 60.017 38.462 0.00 0.00 0.00 3.41
3505 4934 5.689383 TTCTAGGCATTTCAACAAGTGAC 57.311 39.130 0.00 0.00 35.39 3.67
3506 4935 4.973168 TCTAGGCATTTCAACAAGTGACT 58.027 39.130 0.00 0.00 40.60 3.41
3507 4936 6.109156 TCTAGGCATTTCAACAAGTGACTA 57.891 37.500 0.00 0.00 38.51 2.59
3508 4937 5.932303 TCTAGGCATTTCAACAAGTGACTAC 59.068 40.000 0.00 0.00 38.51 2.73
3509 4938 4.460263 AGGCATTTCAACAAGTGACTACA 58.540 39.130 0.00 0.00 35.84 2.74
3510 4939 5.072741 AGGCATTTCAACAAGTGACTACAT 58.927 37.500 0.00 0.00 35.84 2.29
3511 4940 6.237901 AGGCATTTCAACAAGTGACTACATA 58.762 36.000 0.00 0.00 35.84 2.29
3512 4941 6.149474 AGGCATTTCAACAAGTGACTACATAC 59.851 38.462 0.00 0.00 35.84 2.39
3513 4942 6.015504 GCATTTCAACAAGTGACTACATACG 58.984 40.000 0.00 0.00 35.39 3.06
3514 4943 6.534059 CATTTCAACAAGTGACTACATACGG 58.466 40.000 0.00 0.00 35.39 4.02
3515 4944 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
3516 4945 5.456548 TCAACAAGTGACTACATACGGAA 57.543 39.130 0.00 0.00 0.00 4.30
3517 4946 5.224888 TCAACAAGTGACTACATACGGAAC 58.775 41.667 0.00 0.00 0.00 3.62
3518 4947 4.859304 ACAAGTGACTACATACGGAACA 57.141 40.909 0.00 0.00 0.00 3.18
3519 4948 5.204409 ACAAGTGACTACATACGGAACAA 57.796 39.130 0.00 0.00 0.00 2.83
3520 4949 5.603596 ACAAGTGACTACATACGGAACAAA 58.396 37.500 0.00 0.00 0.00 2.83
3521 4950 6.050432 ACAAGTGACTACATACGGAACAAAA 58.950 36.000 0.00 0.00 0.00 2.44
3522 4951 6.708949 ACAAGTGACTACATACGGAACAAAAT 59.291 34.615 0.00 0.00 0.00 1.82
3523 4952 6.721571 AGTGACTACATACGGAACAAAATG 57.278 37.500 0.00 0.00 0.00 2.32
3524 4953 6.460781 AGTGACTACATACGGAACAAAATGA 58.539 36.000 0.00 0.00 0.00 2.57
3525 4954 6.590292 AGTGACTACATACGGAACAAAATGAG 59.410 38.462 0.00 0.00 0.00 2.90
3526 4955 6.367969 GTGACTACATACGGAACAAAATGAGT 59.632 38.462 0.00 0.00 0.00 3.41
3527 4956 6.367695 TGACTACATACGGAACAAAATGAGTG 59.632 38.462 0.00 0.00 0.00 3.51
3528 4957 6.460781 ACTACATACGGAACAAAATGAGTGA 58.539 36.000 0.00 0.00 0.00 3.41
3529 4958 6.932400 ACTACATACGGAACAAAATGAGTGAA 59.068 34.615 0.00 0.00 0.00 3.18
3530 4959 6.817765 ACATACGGAACAAAATGAGTGAAT 57.182 33.333 0.00 0.00 0.00 2.57
3531 4960 7.214467 ACATACGGAACAAAATGAGTGAATT 57.786 32.000 0.00 0.00 0.00 2.17
3532 4961 7.657336 ACATACGGAACAAAATGAGTGAATTT 58.343 30.769 0.00 0.00 0.00 1.82
3533 4962 8.788806 ACATACGGAACAAAATGAGTGAATTTA 58.211 29.630 0.00 0.00 0.00 1.40
3534 4963 9.061610 CATACGGAACAAAATGAGTGAATTTAC 57.938 33.333 0.00 0.00 0.00 2.01
3535 4964 7.033530 ACGGAACAAAATGAGTGAATTTACA 57.966 32.000 2.93 0.00 0.00 2.41
3536 4965 7.657336 ACGGAACAAAATGAGTGAATTTACAT 58.343 30.769 2.93 0.00 0.00 2.29
3537 4966 8.141268 ACGGAACAAAATGAGTGAATTTACATT 58.859 29.630 2.93 0.00 34.99 2.71
3538 4967 8.638565 CGGAACAAAATGAGTGAATTTACATTC 58.361 33.333 2.93 0.00 39.58 2.67
3539 4968 9.696917 GGAACAAAATGAGTGAATTTACATTCT 57.303 29.630 2.93 0.00 39.81 2.40
3566 4995 9.871238 AAAATATGTCTACATACATCCGTATCC 57.129 33.333 4.98 0.00 41.15 2.59
3567 4996 5.562506 ATGTCTACATACATCCGTATCCG 57.437 43.478 0.00 0.00 35.08 4.18
3568 4997 4.392047 TGTCTACATACATCCGTATCCGT 58.608 43.478 0.00 0.00 36.11 4.69
3569 4998 5.550290 TGTCTACATACATCCGTATCCGTA 58.450 41.667 0.00 0.00 36.11 4.02
3570 4999 6.175471 TGTCTACATACATCCGTATCCGTAT 58.825 40.000 0.00 0.00 36.11 3.06
3571 5000 6.093082 TGTCTACATACATCCGTATCCGTATG 59.907 42.308 0.00 0.00 44.32 2.39
3578 5007 6.432607 ACATCCGTATCCGTATGTATGTAG 57.567 41.667 0.00 0.00 41.17 2.74
3579 5008 5.942236 ACATCCGTATCCGTATGTATGTAGT 59.058 40.000 0.00 0.00 41.17 2.73
3580 5009 7.105588 ACATCCGTATCCGTATGTATGTAGTA 58.894 38.462 0.00 0.00 41.17 1.82
3581 5010 7.279536 ACATCCGTATCCGTATGTATGTAGTAG 59.720 40.741 0.00 0.00 41.17 2.57
3582 5011 6.701340 TCCGTATCCGTATGTATGTAGTAGT 58.299 40.000 0.00 0.00 0.00 2.73
3583 5012 7.161404 TCCGTATCCGTATGTATGTAGTAGTT 58.839 38.462 0.00 0.00 0.00 2.24
3584 5013 8.311109 TCCGTATCCGTATGTATGTAGTAGTTA 58.689 37.037 0.00 0.00 0.00 2.24
3585 5014 9.102757 CCGTATCCGTATGTATGTAGTAGTTAT 57.897 37.037 0.00 0.00 0.00 1.89
3616 5045 9.675464 AATGTAAGACAAATATTTAGGAACGGA 57.325 29.630 0.00 0.00 0.00 4.69
3617 5046 8.712285 TGTAAGACAAATATTTAGGAACGGAG 57.288 34.615 0.00 0.00 0.00 4.63
3618 5047 7.767198 TGTAAGACAAATATTTAGGAACGGAGG 59.233 37.037 0.00 0.00 0.00 4.30
3619 5048 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3620 5049 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3621 5050 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3622 5051 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
3623 5052 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
3628 5057 1.020437 GGAACGGAGGGAGTAGTACG 58.980 60.000 0.00 0.00 0.00 3.67
3657 5086 9.975218 ACCATTTTCTGTAACTAATAATCTGGT 57.025 29.630 0.00 0.00 0.00 4.00
3840 5655 2.036098 TCCGGCGAGACCAACCTA 59.964 61.111 9.30 0.00 39.03 3.08
3969 5784 4.148825 GTCATCGTGCTCGGGCCT 62.149 66.667 3.94 0.00 37.74 5.19
4032 5847 3.207669 CGGTACTACCTCGCCGCT 61.208 66.667 3.68 0.00 37.69 5.52
4092 5907 1.603455 CACCACCACCGCCATCTTT 60.603 57.895 0.00 0.00 0.00 2.52
4155 5988 1.374885 CCCGGCGTACAATGACACA 60.375 57.895 6.01 0.00 0.00 3.72
4335 6180 0.598065 GCATCAACAACGCCTCCTTT 59.402 50.000 0.00 0.00 0.00 3.11
4623 6468 4.521062 CTCGCTGAGGGCTTCGGG 62.521 72.222 7.62 3.73 39.13 5.14
4671 6516 1.731969 GTTCAACCTCGACGACCCG 60.732 63.158 0.00 0.00 0.00 5.28
4839 6684 0.041833 TAGGAGAGCTGCAGTCCCTT 59.958 55.000 16.64 2.41 0.00 3.95
4947 6801 4.826733 TGTACCATTCTCACATTTGTTGCT 59.173 37.500 0.00 0.00 0.00 3.91
4950 6804 3.553302 CCATTCTCACATTTGTTGCTGCA 60.553 43.478 0.00 0.00 0.00 4.41
5078 6935 4.223144 AGGGCCTGTTTGTTTCATAAGTT 58.777 39.130 4.50 0.00 0.00 2.66
5134 6991 7.119846 GTCATAAGTCTCTGCCTGTTTGTTTAT 59.880 37.037 0.00 0.00 0.00 1.40
5136 6993 6.803154 AAGTCTCTGCCTGTTTGTTTATAC 57.197 37.500 0.00 0.00 0.00 1.47
5161 7018 3.053095 ACTTATAAGTCCCGAGTCCCTGA 60.053 47.826 12.50 0.00 32.86 3.86
5253 7110 9.027129 CGAATTATAGAATAGTGACAACCGAAA 57.973 33.333 0.00 0.00 0.00 3.46
5259 7116 7.360575 AGAATAGTGACAACCGAAATAACAC 57.639 36.000 0.00 0.00 0.00 3.32
5260 7117 7.159372 AGAATAGTGACAACCGAAATAACACT 58.841 34.615 0.00 0.00 39.74 3.55
5261 7118 7.660208 AGAATAGTGACAACCGAAATAACACTT 59.340 33.333 0.00 0.00 38.01 3.16
5262 7119 5.418310 AGTGACAACCGAAATAACACTTG 57.582 39.130 0.00 0.00 34.21 3.16
5263 7120 4.879545 AGTGACAACCGAAATAACACTTGT 59.120 37.500 0.00 0.00 34.21 3.16
5264 7121 5.355910 AGTGACAACCGAAATAACACTTGTT 59.644 36.000 0.00 0.00 41.73 2.83
5265 7122 5.679792 GTGACAACCGAAATAACACTTGTTC 59.320 40.000 0.00 0.00 39.31 3.18
5266 7123 5.354513 TGACAACCGAAATAACACTTGTTCA 59.645 36.000 0.00 0.00 39.31 3.18
5267 7124 6.038825 TGACAACCGAAATAACACTTGTTCAT 59.961 34.615 0.00 0.00 39.31 2.57
5268 7125 7.226918 TGACAACCGAAATAACACTTGTTCATA 59.773 33.333 0.00 0.00 39.31 2.15
5269 7126 7.357303 ACAACCGAAATAACACTTGTTCATAC 58.643 34.615 0.00 0.00 39.31 2.39
5270 7127 7.012515 ACAACCGAAATAACACTTGTTCATACA 59.987 33.333 0.00 0.00 39.31 2.29
5271 7128 7.499321 ACCGAAATAACACTTGTTCATACAA 57.501 32.000 0.00 0.00 41.82 2.41
5272 7129 7.932335 ACCGAAATAACACTTGTTCATACAAA 58.068 30.769 0.00 0.00 43.33 2.83
5273 7130 7.858879 ACCGAAATAACACTTGTTCATACAAAC 59.141 33.333 0.00 0.00 43.33 2.93
5274 7131 7.059033 CCGAAATAACACTTGTTCATACAAACG 59.941 37.037 0.00 0.00 43.33 3.60
5275 7132 7.794810 CGAAATAACACTTGTTCATACAAACGA 59.205 33.333 0.00 0.00 43.33 3.85
5276 7133 9.607285 GAAATAACACTTGTTCATACAAACGAT 57.393 29.630 0.00 0.00 43.33 3.73
5277 7134 9.959749 AAATAACACTTGTTCATACAAACGATT 57.040 25.926 0.00 0.00 43.33 3.34
5280 7137 8.776680 AACACTTGTTCATACAAACGATTAAC 57.223 30.769 0.00 0.00 43.33 2.01
5281 7138 7.921787 ACACTTGTTCATACAAACGATTAACA 58.078 30.769 0.00 0.00 43.33 2.41
5282 7139 7.853929 ACACTTGTTCATACAAACGATTAACAC 59.146 33.333 0.00 0.00 43.33 3.32
5283 7140 8.067784 CACTTGTTCATACAAACGATTAACACT 58.932 33.333 0.00 0.00 43.33 3.55
5284 7141 8.617809 ACTTGTTCATACAAACGATTAACACTT 58.382 29.630 0.00 0.00 43.33 3.16
5285 7142 8.775220 TTGTTCATACAAACGATTAACACTTG 57.225 30.769 0.00 0.00 41.15 3.16
5286 7143 7.921787 TGTTCATACAAACGATTAACACTTGT 58.078 30.769 0.00 0.00 34.71 3.16
5287 7144 8.399425 TGTTCATACAAACGATTAACACTTGTT 58.601 29.630 0.00 0.00 35.72 2.83
5288 7145 8.678510 GTTCATACAAACGATTAACACTTGTTG 58.321 33.333 4.82 0.00 38.90 3.33
5289 7146 8.144155 TCATACAAACGATTAACACTTGTTGA 57.856 30.769 4.82 0.00 38.90 3.18
5290 7147 8.779303 TCATACAAACGATTAACACTTGTTGAT 58.221 29.630 4.82 1.98 38.90 2.57
5294 7151 8.832521 ACAAACGATTAACACTTGTTGATAAGA 58.167 29.630 4.82 0.00 38.90 2.10
5295 7152 9.658475 CAAACGATTAACACTTGTTGATAAGAA 57.342 29.630 4.82 0.00 38.90 2.52
5296 7153 9.659830 AAACGATTAACACTTGTTGATAAGAAC 57.340 29.630 4.82 0.00 38.90 3.01
5297 7154 7.803724 ACGATTAACACTTGTTGATAAGAACC 58.196 34.615 4.82 0.00 38.90 3.62
5298 7155 7.442969 ACGATTAACACTTGTTGATAAGAACCA 59.557 33.333 4.82 0.00 38.90 3.67
5299 7156 8.450964 CGATTAACACTTGTTGATAAGAACCAT 58.549 33.333 4.82 0.00 38.90 3.55
5326 7183 8.928270 ATAAGAAAGTGTAGATAACAACCGAG 57.072 34.615 0.00 0.00 40.63 4.63
5327 7184 6.585695 AGAAAGTGTAGATAACAACCGAGA 57.414 37.500 0.00 0.00 40.63 4.04
5328 7185 7.171630 AGAAAGTGTAGATAACAACCGAGAT 57.828 36.000 0.00 0.00 40.63 2.75
5329 7186 8.289939 AGAAAGTGTAGATAACAACCGAGATA 57.710 34.615 0.00 0.00 40.63 1.98
5330 7187 8.746530 AGAAAGTGTAGATAACAACCGAGATAA 58.253 33.333 0.00 0.00 40.63 1.75
5331 7188 9.362539 GAAAGTGTAGATAACAACCGAGATAAA 57.637 33.333 0.00 0.00 40.63 1.40
5332 7189 9.715121 AAAGTGTAGATAACAACCGAGATAAAA 57.285 29.630 0.00 0.00 40.63 1.52
5333 7190 9.886132 AAGTGTAGATAACAACCGAGATAAAAT 57.114 29.630 0.00 0.00 40.63 1.82
5432 7618 8.388103 CAAAATAAGAGAGTACATAACAACCGG 58.612 37.037 0.00 0.00 0.00 5.28
5505 7786 1.074775 GGACCACAACCCATCAGCA 59.925 57.895 0.00 0.00 0.00 4.41
5669 7962 6.640499 TGTCTAATAAAATTGTGCAGTGCAAC 59.360 34.615 21.67 14.51 41.47 4.17
5690 7983 1.465777 GCAAGCCACAATGATTTTGCC 59.534 47.619 1.16 0.00 35.98 4.52
5693 7986 3.323751 AGCCACAATGATTTTGCCTTC 57.676 42.857 0.00 0.00 0.00 3.46
5694 7987 2.633967 AGCCACAATGATTTTGCCTTCA 59.366 40.909 0.00 0.00 0.00 3.02
5699 7992 5.579511 CCACAATGATTTTGCCTTCATTCTC 59.420 40.000 0.00 0.00 39.84 2.87
5700 7993 6.160684 CACAATGATTTTGCCTTCATTCTCA 58.839 36.000 0.00 0.00 39.84 3.27
5702 7995 7.333423 CACAATGATTTTGCCTTCATTCTCATT 59.667 33.333 0.00 0.00 39.84 2.57
5703 7996 8.533657 ACAATGATTTTGCCTTCATTCTCATTA 58.466 29.630 0.00 0.00 39.84 1.90
5866 10535 3.197790 CCTCAACGGCAGATGCGG 61.198 66.667 10.45 10.45 45.39 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.597663 GGCATCGATGGGTTCTAAACG 59.402 52.381 26.00 0.00 0.00 3.60
1 2 1.947456 GGGCATCGATGGGTTCTAAAC 59.053 52.381 26.00 6.44 0.00 2.01
3 4 1.507140 AGGGCATCGATGGGTTCTAA 58.493 50.000 26.00 0.00 0.00 2.10
4 5 1.507140 AAGGGCATCGATGGGTTCTA 58.493 50.000 26.00 0.00 0.00 2.10
5 6 0.625849 AAAGGGCATCGATGGGTTCT 59.374 50.000 26.00 1.54 0.00 3.01
6 7 0.740737 CAAAGGGCATCGATGGGTTC 59.259 55.000 26.00 9.67 0.00 3.62
8 9 0.394352 GACAAAGGGCATCGATGGGT 60.394 55.000 26.00 0.62 0.00 4.51
9 10 0.394216 TGACAAAGGGCATCGATGGG 60.394 55.000 26.00 2.75 0.00 4.00
10 11 0.734889 GTGACAAAGGGCATCGATGG 59.265 55.000 26.00 11.11 0.00 3.51
11 12 1.742761 AGTGACAAAGGGCATCGATG 58.257 50.000 21.27 21.27 0.00 3.84
12 13 2.501723 AGTAGTGACAAAGGGCATCGAT 59.498 45.455 0.00 0.00 0.00 3.59
13 14 1.899814 AGTAGTGACAAAGGGCATCGA 59.100 47.619 0.00 0.00 0.00 3.59
14 15 2.386661 AGTAGTGACAAAGGGCATCG 57.613 50.000 0.00 0.00 0.00 3.84
15 16 4.833390 AGTAAGTAGTGACAAAGGGCATC 58.167 43.478 0.00 0.00 0.00 3.91
16 17 4.910458 AGTAAGTAGTGACAAAGGGCAT 57.090 40.909 0.00 0.00 0.00 4.40
17 18 6.368779 AATAGTAAGTAGTGACAAAGGGCA 57.631 37.500 0.00 0.00 0.00 5.36
18 19 7.606839 AGAAAATAGTAAGTAGTGACAAAGGGC 59.393 37.037 0.00 0.00 0.00 5.19
19 20 8.936864 CAGAAAATAGTAAGTAGTGACAAAGGG 58.063 37.037 0.00 0.00 0.00 3.95
20 21 9.706691 TCAGAAAATAGTAAGTAGTGACAAAGG 57.293 33.333 0.00 0.00 0.00 3.11
24 25 9.639601 CACATCAGAAAATAGTAAGTAGTGACA 57.360 33.333 0.00 0.00 0.00 3.58
25 26 8.596380 GCACATCAGAAAATAGTAAGTAGTGAC 58.404 37.037 0.00 0.00 0.00 3.67
26 27 8.311109 TGCACATCAGAAAATAGTAAGTAGTGA 58.689 33.333 0.00 0.00 0.00 3.41
27 28 8.479313 TGCACATCAGAAAATAGTAAGTAGTG 57.521 34.615 0.00 0.00 0.00 2.74
28 29 9.319143 GATGCACATCAGAAAATAGTAAGTAGT 57.681 33.333 5.76 0.00 37.74 2.73
29 30 9.317936 TGATGCACATCAGAAAATAGTAAGTAG 57.682 33.333 9.23 0.00 42.42 2.57
62 63 8.596380 GCTTGTACTACTTAGCAAAGAACATAG 58.404 37.037 0.00 0.00 36.50 2.23
63 64 8.092068 TGCTTGTACTACTTAGCAAAGAACATA 58.908 33.333 11.74 0.00 40.39 2.29
64 65 6.934645 TGCTTGTACTACTTAGCAAAGAACAT 59.065 34.615 11.74 0.00 40.39 2.71
66 67 6.780706 TGCTTGTACTACTTAGCAAAGAAC 57.219 37.500 11.74 0.00 40.39 3.01
73 74 4.865365 CCTCTGTTGCTTGTACTACTTAGC 59.135 45.833 0.00 6.84 0.00 3.09
74 75 6.268825 TCCTCTGTTGCTTGTACTACTTAG 57.731 41.667 0.00 0.00 0.00 2.18
75 76 6.492429 TCTTCCTCTGTTGCTTGTACTACTTA 59.508 38.462 0.00 0.00 0.00 2.24
95 96 7.937942 TGTACTAGTACATCTAGATGGTCTTCC 59.062 40.741 31.19 15.03 46.53 3.46
115 116 4.634004 CCATTTGTGAGGCGAAATGTACTA 59.366 41.667 0.00 0.00 37.71 1.82
116 117 3.440173 CCATTTGTGAGGCGAAATGTACT 59.560 43.478 0.00 0.00 37.71 2.73
117 118 3.758300 CCATTTGTGAGGCGAAATGTAC 58.242 45.455 0.00 0.00 37.71 2.90
119 120 1.067635 GCCATTTGTGAGGCGAAATGT 60.068 47.619 0.00 0.00 41.70 2.71
120 121 1.632422 GCCATTTGTGAGGCGAAATG 58.368 50.000 0.00 0.00 41.70 2.32
138 139 4.089923 GCAAATTCGTTACTTGACCATTGC 59.910 41.667 0.00 0.00 0.00 3.56
151 152 7.961325 AATTTTTGGATACTGCAAATTCGTT 57.039 28.000 0.00 0.00 37.52 3.85
153 154 6.737750 GCAAATTTTTGGATACTGCAAATTCG 59.262 34.615 5.28 0.00 37.52 3.34
160 161 3.371898 GCCTGCAAATTTTTGGATACTGC 59.628 43.478 5.28 0.00 37.86 4.40
174 175 0.179124 GTTCGGTTTGTGCCTGCAAA 60.179 50.000 0.00 0.00 36.17 3.68
177 178 0.869880 GTTGTTCGGTTTGTGCCTGC 60.870 55.000 0.00 0.00 0.00 4.85
178 179 0.738389 AGTTGTTCGGTTTGTGCCTG 59.262 50.000 0.00 0.00 0.00 4.85
185 186 3.564053 TTGGTAGGAGTTGTTCGGTTT 57.436 42.857 0.00 0.00 0.00 3.27
190 191 6.263344 GTCTTTTGTTTGGTAGGAGTTGTTC 58.737 40.000 0.00 0.00 0.00 3.18
201 202 6.553953 AGGTTAATTGGTCTTTTGTTTGGT 57.446 33.333 0.00 0.00 0.00 3.67
208 209 8.573885 GTTTACTGCTAGGTTAATTGGTCTTTT 58.426 33.333 0.00 0.00 0.00 2.27
233 234 3.897505 ACTTACTAGTTAACCGTGGGTGT 59.102 43.478 0.00 0.00 35.34 4.16
480 481 1.506320 GTACGTCGCGACTAATCAACG 59.494 52.381 33.94 22.19 33.47 4.10
636 655 7.323049 TCTCTGCTTTGCTAAGTAGTAGTAG 57.677 40.000 21.17 13.42 42.62 2.57
637 656 7.254829 CGATCTCTGCTTTGCTAAGTAGTAGTA 60.255 40.741 21.17 9.25 42.62 1.82
638 657 6.459024 CGATCTCTGCTTTGCTAAGTAGTAGT 60.459 42.308 21.17 10.97 42.62 2.73
713 739 6.322712 AGACCTACTCAACTCCATCATAAGAC 59.677 42.308 0.00 0.00 0.00 3.01
788 814 1.591619 GGCGCGGTTAGCTTTAGTAAG 59.408 52.381 8.83 0.00 45.59 2.34
867 896 7.084486 GCGTTGATTCTGAGGAGTAAATTTTT 58.916 34.615 0.00 0.00 0.00 1.94
872 901 4.245660 CTGCGTTGATTCTGAGGAGTAAA 58.754 43.478 0.00 0.00 0.00 2.01
878 919 2.084610 TGACTGCGTTGATTCTGAGG 57.915 50.000 0.00 0.00 0.00 3.86
882 923 3.411446 TCCAAATGACTGCGTTGATTCT 58.589 40.909 0.00 0.00 0.00 2.40
883 924 3.829886 TCCAAATGACTGCGTTGATTC 57.170 42.857 0.00 0.00 0.00 2.52
884 925 3.758023 TGATCCAAATGACTGCGTTGATT 59.242 39.130 0.00 0.00 0.00 2.57
885 926 3.346315 TGATCCAAATGACTGCGTTGAT 58.654 40.909 0.00 0.00 0.00 2.57
886 927 2.777094 TGATCCAAATGACTGCGTTGA 58.223 42.857 0.00 0.00 0.00 3.18
887 928 3.236816 GTTGATCCAAATGACTGCGTTG 58.763 45.455 0.00 0.00 0.00 4.10
888 929 2.228822 GGTTGATCCAAATGACTGCGTT 59.771 45.455 0.00 0.00 35.97 4.84
889 930 1.812571 GGTTGATCCAAATGACTGCGT 59.187 47.619 0.00 0.00 35.97 5.24
890 931 1.202065 CGGTTGATCCAAATGACTGCG 60.202 52.381 0.00 0.00 35.57 5.18
891 932 1.133025 CCGGTTGATCCAAATGACTGC 59.867 52.381 0.00 0.00 35.57 4.40
892 933 2.436417 ACCGGTTGATCCAAATGACTG 58.564 47.619 0.00 0.00 35.57 3.51
893 934 2.819608 CAACCGGTTGATCCAAATGACT 59.180 45.455 38.61 0.00 42.93 3.41
901 950 0.958822 AGCAAACAACCGGTTGATCC 59.041 50.000 45.25 29.27 42.93 3.36
914 971 3.802866 TGGTTGGAATTGGAAAGCAAAC 58.197 40.909 0.00 0.00 0.00 2.93
936 994 1.876156 CAGGCAGTCCACTTGTTTCTC 59.124 52.381 0.00 0.00 33.74 2.87
960 1034 1.783250 ATATAGGGGCACTGGCAGGC 61.783 60.000 20.34 18.17 43.71 4.85
961 1035 1.656587 TATATAGGGGCACTGGCAGG 58.343 55.000 20.34 9.00 43.71 4.85
962 1036 2.026822 CCTTATATAGGGGCACTGGCAG 60.027 54.545 14.16 14.16 40.67 4.85
963 1037 1.985159 CCTTATATAGGGGCACTGGCA 59.015 52.381 0.00 0.00 40.67 4.92
964 1038 2.789409 CCTTATATAGGGGCACTGGC 57.211 55.000 0.00 0.00 40.67 4.85
1029 1108 3.005539 GCTCCCTCCTGCTGACCA 61.006 66.667 0.00 0.00 0.00 4.02
1030 1109 3.005539 TGCTCCCTCCTGCTGACC 61.006 66.667 0.00 0.00 0.00 4.02
1074 1153 1.510383 CGACAGGGAGCAGACTGAG 59.490 63.158 6.65 0.00 38.09 3.35
1226 1305 1.607756 AGAACTCAGAGCCGCCAGA 60.608 57.895 0.00 0.00 0.00 3.86
1237 1316 1.434188 ACACCACCCATCAGAACTCA 58.566 50.000 0.00 0.00 0.00 3.41
1240 1319 1.247567 CCAACACCACCCATCAGAAC 58.752 55.000 0.00 0.00 0.00 3.01
1250 1329 1.885887 ACACATATGCACCAACACCAC 59.114 47.619 1.58 0.00 0.00 4.16
1268 1347 2.169144 CTCCTGGATCTGCATACACACA 59.831 50.000 0.00 0.00 0.00 3.72
1269 1348 2.484417 CCTCCTGGATCTGCATACACAC 60.484 54.545 0.00 0.00 34.57 3.82
1270 1349 1.764723 CCTCCTGGATCTGCATACACA 59.235 52.381 0.00 0.00 34.57 3.72
1271 1350 1.542108 GCCTCCTGGATCTGCATACAC 60.542 57.143 0.00 0.00 34.57 2.90
1315 1395 4.794439 CCGTCACGATGCTCCGCA 62.794 66.667 0.00 0.00 44.86 5.69
1453 1536 9.582431 AATATCATGCATGCTTTTTCATATAGC 57.418 29.630 22.25 0.00 35.50 2.97
1766 1864 1.407721 TAATCTGCGTGCGTGCGTAC 61.408 55.000 2.83 2.83 37.81 3.67
1818 1948 3.987868 TGTTAAGTGCAACAACGCAAAAA 59.012 34.783 0.00 0.00 45.14 1.94
1820 1950 3.217599 TGTTAAGTGCAACAACGCAAA 57.782 38.095 0.00 0.00 45.14 3.68
1852 1982 9.104965 GGGAGTATTACGCAATTGCAATATATA 57.895 33.333 28.77 15.04 42.21 0.86
1853 1983 7.829211 AGGGAGTATTACGCAATTGCAATATAT 59.171 33.333 28.77 17.11 42.21 0.86
1854 1984 7.165485 AGGGAGTATTACGCAATTGCAATATA 58.835 34.615 28.77 18.14 42.21 0.86
1855 1985 6.003950 AGGGAGTATTACGCAATTGCAATAT 58.996 36.000 28.77 19.06 42.21 1.28
1856 1986 5.373222 AGGGAGTATTACGCAATTGCAATA 58.627 37.500 28.77 21.41 42.21 1.90
1857 1987 4.207165 AGGGAGTATTACGCAATTGCAAT 58.793 39.130 28.77 22.36 42.21 3.56
1858 1988 3.616219 AGGGAGTATTACGCAATTGCAA 58.384 40.909 28.77 17.33 42.21 4.08
1859 1989 3.275617 AGGGAGTATTACGCAATTGCA 57.724 42.857 28.77 11.27 42.21 4.08
1860 1990 3.303132 CGAAGGGAGTATTACGCAATTGC 60.303 47.826 20.76 20.76 37.78 3.56
1861 1991 3.869246 ACGAAGGGAGTATTACGCAATTG 59.131 43.478 0.00 0.00 0.00 2.32
1862 1992 4.133013 ACGAAGGGAGTATTACGCAATT 57.867 40.909 0.00 0.00 0.00 2.32
1863 1993 3.814005 ACGAAGGGAGTATTACGCAAT 57.186 42.857 0.00 0.00 0.00 3.56
1864 1994 3.514645 GAACGAAGGGAGTATTACGCAA 58.485 45.455 0.00 0.00 0.00 4.85
1865 1995 2.159198 GGAACGAAGGGAGTATTACGCA 60.159 50.000 0.00 0.00 0.00 5.24
1866 1996 2.159198 TGGAACGAAGGGAGTATTACGC 60.159 50.000 0.00 0.00 0.00 4.42
1867 1997 3.788333 TGGAACGAAGGGAGTATTACG 57.212 47.619 0.00 0.00 0.00 3.18
1868 1998 6.989659 TCATATGGAACGAAGGGAGTATTAC 58.010 40.000 2.13 0.00 0.00 1.89
1869 1999 7.606135 TTCATATGGAACGAAGGGAGTATTA 57.394 36.000 2.13 0.00 0.00 0.98
1870 2000 6.494666 TTCATATGGAACGAAGGGAGTATT 57.505 37.500 2.13 0.00 0.00 1.89
1871 2001 6.289064 GTTTCATATGGAACGAAGGGAGTAT 58.711 40.000 11.13 0.00 34.56 2.12
1872 2002 5.667466 GTTTCATATGGAACGAAGGGAGTA 58.333 41.667 11.13 0.00 34.56 2.59
1873 2003 4.514401 GTTTCATATGGAACGAAGGGAGT 58.486 43.478 11.13 0.00 34.56 3.85
1874 2004 3.555956 CGTTTCATATGGAACGAAGGGAG 59.444 47.826 35.66 11.46 34.56 4.30
1875 2005 3.196039 TCGTTTCATATGGAACGAAGGGA 59.804 43.478 37.71 21.96 36.67 4.20
1876 2006 3.527533 TCGTTTCATATGGAACGAAGGG 58.472 45.455 37.71 17.78 36.67 3.95
1879 2009 3.936453 CCCTTCGTTTCATATGGAACGAA 59.064 43.478 41.22 41.22 41.81 3.85
1880 2010 3.196039 TCCCTTCGTTTCATATGGAACGA 59.804 43.478 36.73 36.73 37.31 3.85
1881 2011 3.527533 TCCCTTCGTTTCATATGGAACG 58.472 45.455 33.99 33.99 34.56 3.95
1882 2012 4.514401 ACTCCCTTCGTTTCATATGGAAC 58.486 43.478 15.88 15.88 34.56 3.62
1883 2013 4.837093 ACTCCCTTCGTTTCATATGGAA 57.163 40.909 2.13 0.00 0.00 3.53
1884 2014 4.202223 GCTACTCCCTTCGTTTCATATGGA 60.202 45.833 2.13 0.00 0.00 3.41
1971 2123 0.830648 TATGCTGTGCACTAGGTCCC 59.169 55.000 19.41 2.20 43.04 4.46
2039 2192 3.650139 GTCAACTGGAATACGACACACT 58.350 45.455 0.00 0.00 0.00 3.55
2053 2212 9.866936 GAAGTATATAGTAGTCTTCGTCAACTG 57.133 37.037 0.00 0.00 0.00 3.16
2073 2232 8.743714 GTCCTTCCAAGAAATGAAATGAAGTAT 58.256 33.333 0.00 0.00 0.00 2.12
2074 2233 7.176690 GGTCCTTCCAAGAAATGAAATGAAGTA 59.823 37.037 0.00 0.00 35.97 2.24
2075 2234 6.015095 GGTCCTTCCAAGAAATGAAATGAAGT 60.015 38.462 0.00 0.00 35.97 3.01
2076 2235 6.393171 GGTCCTTCCAAGAAATGAAATGAAG 58.607 40.000 0.00 0.00 35.97 3.02
2078 2237 4.458989 CGGTCCTTCCAAGAAATGAAATGA 59.541 41.667 0.00 0.00 35.57 2.57
2079 2238 4.380867 CCGGTCCTTCCAAGAAATGAAATG 60.381 45.833 0.00 0.00 35.57 2.32
2080 2239 3.763897 CCGGTCCTTCCAAGAAATGAAAT 59.236 43.478 0.00 0.00 35.57 2.17
2081 2240 3.153919 CCGGTCCTTCCAAGAAATGAAA 58.846 45.455 0.00 0.00 35.57 2.69
2082 2241 2.790433 CCGGTCCTTCCAAGAAATGAA 58.210 47.619 0.00 0.00 35.57 2.57
2083 2242 1.613255 GCCGGTCCTTCCAAGAAATGA 60.613 52.381 1.90 0.00 35.57 2.57
2084 2243 0.811281 GCCGGTCCTTCCAAGAAATG 59.189 55.000 1.90 0.00 35.57 2.32
2085 2244 0.698818 AGCCGGTCCTTCCAAGAAAT 59.301 50.000 1.90 0.00 35.57 2.17
2086 2245 0.476771 AAGCCGGTCCTTCCAAGAAA 59.523 50.000 1.90 0.00 35.57 2.52
2087 2246 1.354101 TAAGCCGGTCCTTCCAAGAA 58.646 50.000 1.90 0.00 35.57 2.52
2088 2247 1.354101 TTAAGCCGGTCCTTCCAAGA 58.646 50.000 1.90 0.00 35.57 3.02
2089 2248 2.017049 CATTAAGCCGGTCCTTCCAAG 58.983 52.381 1.90 0.00 35.57 3.61
2090 2249 1.953311 GCATTAAGCCGGTCCTTCCAA 60.953 52.381 1.90 0.00 37.23 3.53
2091 2250 0.393808 GCATTAAGCCGGTCCTTCCA 60.394 55.000 1.90 0.00 37.23 3.53
2092 2251 1.436983 CGCATTAAGCCGGTCCTTCC 61.437 60.000 1.90 0.00 41.38 3.46
2138 2298 2.094597 TGCTAGAATTTGCCATGTGTGC 60.095 45.455 0.00 0.00 0.00 4.57
2169 2329 6.870965 TGAACACAACAACTTTTTGCAGTAAT 59.129 30.769 0.00 0.00 36.00 1.89
2177 2337 6.423604 CCTTGAAGTGAACACAACAACTTTTT 59.576 34.615 7.68 0.00 0.00 1.94
2208 2368 5.617751 GCAACTTATGTCATCGGGAATATGC 60.618 44.000 0.00 0.00 0.00 3.14
2262 2422 4.876701 AGCAAACGTCAGCTGGAA 57.123 50.000 15.13 0.00 40.13 3.53
2291 2451 4.019792 TCACTGCCTATTTCAAGAAGCA 57.980 40.909 0.00 0.00 0.00 3.91
2316 2476 9.731819 CTATGTATGATTAGTTTCTGTGTACGT 57.268 33.333 0.00 0.00 0.00 3.57
2361 2521 9.750783 TTTCAAGATTCCACTACTACTACTACT 57.249 33.333 0.00 0.00 0.00 2.57
2428 2588 5.585047 CCCTCCTAATTTCGTTACTTTGGAG 59.415 44.000 0.00 0.00 39.84 3.86
2438 2598 2.723273 CAAAGCCCCTCCTAATTTCGT 58.277 47.619 0.00 0.00 0.00 3.85
2475 2635 1.983119 ATGGGAATGATGACGGCCGT 61.983 55.000 34.89 34.89 0.00 5.68
2508 2668 1.145156 GCCAACAACCAACCAACCC 59.855 57.895 0.00 0.00 0.00 4.11
2588 2749 6.134730 GTCTTAGACCGACGTGATAATACTG 58.865 44.000 0.00 0.00 0.00 2.74
2590 2751 5.136020 CGTCTTAGACCGACGTGATAATAC 58.864 45.833 6.80 0.00 46.56 1.89
2593 2754 3.663464 CGTCTTAGACCGACGTGATAA 57.337 47.619 6.80 0.00 46.56 1.75
2701 2863 9.152327 TCATGAGTAAAGAAGGATCTCACATAT 57.848 33.333 0.00 0.00 37.85 1.78
2745 2907 9.875691 TGAGATATATATGCACATGTTTCCTAC 57.124 33.333 0.00 0.00 0.00 3.18
2842 3929 8.508062 TCGATTTGTCCGAATATTTTTGAAAGA 58.492 29.630 0.00 0.00 32.64 2.52
2858 3945 1.943340 GCATCCTCCTTCGATTTGTCC 59.057 52.381 0.00 0.00 0.00 4.02
2915 4002 5.685728 AGGAAATAATGTACAAGAGGCTCC 58.314 41.667 11.71 2.50 0.00 4.70
3023 4110 9.885934 GAAAGTACTTCTCCAAAGATTTTCTTC 57.114 33.333 8.95 0.00 35.27 2.87
3098 4208 4.081807 AGGGAGCTCTTTTTGAATGCAATC 60.082 41.667 14.64 0.00 33.25 2.67
3110 4524 0.398318 ACGCTTTCAGGGAGCTCTTT 59.602 50.000 14.64 0.00 37.99 2.52
3142 4556 5.357257 ACTCCGTTTATTGCGAATCTATGT 58.643 37.500 0.00 0.00 0.00 2.29
3213 4627 6.292649 GCAACAACCTAAATAAACAGCCAAAC 60.293 38.462 0.00 0.00 0.00 2.93
3294 4708 2.517959 AGCATGCTGTACCACATGTTT 58.482 42.857 21.98 10.70 44.43 2.83
3408 4837 8.857694 TTTTCCTCTTAAACAATAGTAGTGGG 57.142 34.615 2.24 0.00 0.00 4.61
3436 4865 7.682890 AGGGAGTAGTATCTATCTAGCTCTTCT 59.317 40.741 0.00 0.00 0.00 2.85
3454 4883 5.139001 AGTATTTAGGAACGGAGGGAGTAG 58.861 45.833 0.00 0.00 0.00 2.57
3461 4890 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
3462 4891 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
3464 4893 7.010275 GCCTAGAAAGACAAGTATTTAGGAACG 59.990 40.741 11.40 0.00 26.70 3.95
3465 4894 7.822822 TGCCTAGAAAGACAAGTATTTAGGAAC 59.177 37.037 11.40 0.00 26.70 3.62
3466 4895 7.913789 TGCCTAGAAAGACAAGTATTTAGGAA 58.086 34.615 11.40 1.02 26.70 3.36
3467 4896 7.490657 TGCCTAGAAAGACAAGTATTTAGGA 57.509 36.000 11.40 0.00 26.70 2.94
3468 4897 8.738645 AATGCCTAGAAAGACAAGTATTTAGG 57.261 34.615 5.26 5.26 0.00 2.69
3470 4899 9.733556 TGAAATGCCTAGAAAGACAAGTATTTA 57.266 29.630 0.00 0.00 0.00 1.40
3471 4900 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
3472 4901 8.515414 GTTGAAATGCCTAGAAAGACAAGTATT 58.485 33.333 0.00 0.00 0.00 1.89
3473 4902 7.665559 TGTTGAAATGCCTAGAAAGACAAGTAT 59.334 33.333 0.00 0.00 0.00 2.12
3474 4903 6.995686 TGTTGAAATGCCTAGAAAGACAAGTA 59.004 34.615 0.00 0.00 0.00 2.24
3475 4904 5.827797 TGTTGAAATGCCTAGAAAGACAAGT 59.172 36.000 0.00 0.00 0.00 3.16
3476 4905 6.317789 TGTTGAAATGCCTAGAAAGACAAG 57.682 37.500 0.00 0.00 0.00 3.16
3477 4906 6.321181 ACTTGTTGAAATGCCTAGAAAGACAA 59.679 34.615 0.00 0.00 0.00 3.18
3478 4907 5.827797 ACTTGTTGAAATGCCTAGAAAGACA 59.172 36.000 0.00 0.00 0.00 3.41
3479 4908 6.017109 TCACTTGTTGAAATGCCTAGAAAGAC 60.017 38.462 0.00 0.00 0.00 3.01
3480 4909 6.017109 GTCACTTGTTGAAATGCCTAGAAAGA 60.017 38.462 0.00 0.00 35.39 2.52
3481 4910 6.016777 AGTCACTTGTTGAAATGCCTAGAAAG 60.017 38.462 0.00 0.00 35.39 2.62
3482 4911 5.827797 AGTCACTTGTTGAAATGCCTAGAAA 59.172 36.000 0.00 0.00 35.39 2.52
3483 4912 5.376625 AGTCACTTGTTGAAATGCCTAGAA 58.623 37.500 0.00 0.00 35.39 2.10
3484 4913 4.973168 AGTCACTTGTTGAAATGCCTAGA 58.027 39.130 0.00 0.00 35.39 2.43
3485 4914 5.700832 TGTAGTCACTTGTTGAAATGCCTAG 59.299 40.000 0.00 0.00 35.39 3.02
3486 4915 5.616270 TGTAGTCACTTGTTGAAATGCCTA 58.384 37.500 0.00 0.00 35.39 3.93
3487 4916 4.460263 TGTAGTCACTTGTTGAAATGCCT 58.540 39.130 0.00 0.00 35.39 4.75
3488 4917 4.829064 TGTAGTCACTTGTTGAAATGCC 57.171 40.909 0.00 0.00 35.39 4.40
3489 4918 6.015504 CGTATGTAGTCACTTGTTGAAATGC 58.984 40.000 0.00 0.00 35.39 3.56
3490 4919 6.367695 TCCGTATGTAGTCACTTGTTGAAATG 59.632 38.462 0.00 0.00 35.39 2.32
3491 4920 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
3492 4921 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
3493 4922 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
3494 4923 5.221283 TGTTCCGTATGTAGTCACTTGTTGA 60.221 40.000 0.00 0.00 0.00 3.18
3495 4924 4.986034 TGTTCCGTATGTAGTCACTTGTTG 59.014 41.667 0.00 0.00 0.00 3.33
3496 4925 5.204409 TGTTCCGTATGTAGTCACTTGTT 57.796 39.130 0.00 0.00 0.00 2.83
3497 4926 4.859304 TGTTCCGTATGTAGTCACTTGT 57.141 40.909 0.00 0.00 0.00 3.16
3498 4927 6.533819 TTTTGTTCCGTATGTAGTCACTTG 57.466 37.500 0.00 0.00 0.00 3.16
3499 4928 6.932400 TCATTTTGTTCCGTATGTAGTCACTT 59.068 34.615 0.00 0.00 0.00 3.16
3500 4929 6.460781 TCATTTTGTTCCGTATGTAGTCACT 58.539 36.000 0.00 0.00 0.00 3.41
3501 4930 6.367969 ACTCATTTTGTTCCGTATGTAGTCAC 59.632 38.462 0.00 0.00 0.00 3.67
3502 4931 6.367695 CACTCATTTTGTTCCGTATGTAGTCA 59.632 38.462 0.00 0.00 0.00 3.41
3503 4932 6.588756 TCACTCATTTTGTTCCGTATGTAGTC 59.411 38.462 0.00 0.00 0.00 2.59
3504 4933 6.460781 TCACTCATTTTGTTCCGTATGTAGT 58.539 36.000 0.00 0.00 0.00 2.73
3505 4934 6.961359 TCACTCATTTTGTTCCGTATGTAG 57.039 37.500 0.00 0.00 0.00 2.74
3506 4935 7.915293 ATTCACTCATTTTGTTCCGTATGTA 57.085 32.000 0.00 0.00 0.00 2.29
3507 4936 6.817765 ATTCACTCATTTTGTTCCGTATGT 57.182 33.333 0.00 0.00 0.00 2.29
3508 4937 9.061610 GTAAATTCACTCATTTTGTTCCGTATG 57.938 33.333 0.00 0.00 0.00 2.39
3509 4938 8.788806 TGTAAATTCACTCATTTTGTTCCGTAT 58.211 29.630 0.00 0.00 0.00 3.06
3510 4939 8.155821 TGTAAATTCACTCATTTTGTTCCGTA 57.844 30.769 0.00 0.00 0.00 4.02
3511 4940 7.033530 TGTAAATTCACTCATTTTGTTCCGT 57.966 32.000 0.00 0.00 0.00 4.69
3512 4941 8.519492 AATGTAAATTCACTCATTTTGTTCCG 57.481 30.769 0.00 0.00 0.00 4.30
3513 4942 9.696917 AGAATGTAAATTCACTCATTTTGTTCC 57.303 29.630 8.36 0.00 31.87 3.62
3540 4969 9.871238 GGATACGGATGTATGTAGACATATTTT 57.129 33.333 5.69 0.00 41.37 1.82
3590 5019 9.675464 TCCGTTCCTAAATATTTGTCTTACATT 57.325 29.630 11.05 0.00 0.00 2.71
3591 5020 9.326413 CTCCGTTCCTAAATATTTGTCTTACAT 57.674 33.333 11.05 0.00 0.00 2.29
3592 5021 7.767198 CCTCCGTTCCTAAATATTTGTCTTACA 59.233 37.037 11.05 0.00 0.00 2.41
3593 5022 7.226128 CCCTCCGTTCCTAAATATTTGTCTTAC 59.774 40.741 11.05 2.46 0.00 2.34
3594 5023 7.126115 TCCCTCCGTTCCTAAATATTTGTCTTA 59.874 37.037 11.05 0.00 0.00 2.10
3595 5024 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3596 5025 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3597 5026 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3598 5027 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3599 5028 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3600 5029 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3601 5030 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
3602 5031 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
3603 5032 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
3604 5033 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
3605 5034 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
3606 5035 3.682718 CGTACTACTCCCTCCGTTCCTAA 60.683 52.174 0.00 0.00 0.00 2.69
3607 5036 2.158900 CGTACTACTCCCTCCGTTCCTA 60.159 54.545 0.00 0.00 0.00 2.94
3608 5037 1.407989 CGTACTACTCCCTCCGTTCCT 60.408 57.143 0.00 0.00 0.00 3.36
3609 5038 1.020437 CGTACTACTCCCTCCGTTCC 58.980 60.000 0.00 0.00 0.00 3.62
3610 5039 1.020437 CCGTACTACTCCCTCCGTTC 58.980 60.000 0.00 0.00 0.00 3.95
3611 5040 0.329596 ACCGTACTACTCCCTCCGTT 59.670 55.000 0.00 0.00 0.00 4.44
3612 5041 1.134371 GTACCGTACTACTCCCTCCGT 60.134 57.143 1.14 0.00 0.00 4.69
3613 5042 1.587547 GTACCGTACTACTCCCTCCG 58.412 60.000 1.14 0.00 0.00 4.63
3614 5043 1.212935 TGGTACCGTACTACTCCCTCC 59.787 57.143 7.57 0.00 0.00 4.30
3615 5044 2.717639 TGGTACCGTACTACTCCCTC 57.282 55.000 7.57 0.00 0.00 4.30
3616 5045 3.677156 AATGGTACCGTACTACTCCCT 57.323 47.619 7.15 0.00 0.00 4.20
3617 5046 4.403752 AGAAAATGGTACCGTACTACTCCC 59.596 45.833 7.15 0.00 0.00 4.30
3618 5047 5.105595 ACAGAAAATGGTACCGTACTACTCC 60.106 44.000 7.15 0.00 0.00 3.85
3619 5048 5.958955 ACAGAAAATGGTACCGTACTACTC 58.041 41.667 7.15 0.35 0.00 2.59
3620 5049 5.990120 ACAGAAAATGGTACCGTACTACT 57.010 39.130 7.15 2.41 0.00 2.57
3621 5050 7.315890 AGTTACAGAAAATGGTACCGTACTAC 58.684 38.462 7.15 3.73 0.00 2.73
3622 5051 7.466746 AGTTACAGAAAATGGTACCGTACTA 57.533 36.000 7.15 2.83 0.00 1.82
3623 5052 6.350629 AGTTACAGAAAATGGTACCGTACT 57.649 37.500 7.15 1.42 0.00 2.73
3667 5096 3.626924 GTCCCACCACTCGCCTGT 61.627 66.667 0.00 0.00 0.00 4.00
4155 5988 3.802418 GAACGTGGTCACCGTGGCT 62.802 63.158 2.58 0.00 38.77 4.75
4311 6156 2.555782 GCGTTGTTGATGCTCGCA 59.444 55.556 0.00 0.00 45.01 5.10
4335 6180 4.954118 ACGGTGGAGGGGAGCACA 62.954 66.667 0.00 0.00 0.00 4.57
4623 6468 1.480219 CGGTAGCGGCATCGAAGTTC 61.480 60.000 6.39 0.00 39.00 3.01
4671 6516 1.586154 CCACCGTGTTCCTCATTGGC 61.586 60.000 0.00 0.00 35.26 4.52
5118 6975 3.998341 GTCGGTATAAACAAACAGGCAGA 59.002 43.478 0.00 0.00 0.00 4.26
5161 7018 8.215736 ACTTATAAGTCCCTGTAAACAAACAGT 58.784 33.333 12.50 0.00 39.12 3.55
5254 7111 9.866936 GTTAATCGTTTGTATGAACAAGTGTTA 57.133 29.630 0.00 0.00 45.99 2.41
5255 7112 8.399425 TGTTAATCGTTTGTATGAACAAGTGTT 58.601 29.630 0.00 0.00 45.99 3.32
5256 7113 7.853929 GTGTTAATCGTTTGTATGAACAAGTGT 59.146 33.333 0.00 0.00 45.99 3.55
5257 7114 8.067784 AGTGTTAATCGTTTGTATGAACAAGTG 58.932 33.333 0.00 0.00 45.99 3.16
5258 7115 8.149973 AGTGTTAATCGTTTGTATGAACAAGT 57.850 30.769 0.00 0.00 45.99 3.16
5259 7116 8.891928 CAAGTGTTAATCGTTTGTATGAACAAG 58.108 33.333 0.00 0.00 45.99 3.16
5260 7117 8.399425 ACAAGTGTTAATCGTTTGTATGAACAA 58.601 29.630 0.00 0.00 43.85 2.83
5261 7118 7.921787 ACAAGTGTTAATCGTTTGTATGAACA 58.078 30.769 0.00 0.00 30.79 3.18
5262 7119 8.678510 CAACAAGTGTTAATCGTTTGTATGAAC 58.321 33.333 0.00 0.00 36.32 3.18
5263 7120 8.613482 TCAACAAGTGTTAATCGTTTGTATGAA 58.387 29.630 0.00 0.00 36.32 2.57
5264 7121 8.144155 TCAACAAGTGTTAATCGTTTGTATGA 57.856 30.769 0.00 0.00 36.32 2.15
5265 7122 8.948853 ATCAACAAGTGTTAATCGTTTGTATG 57.051 30.769 0.00 0.00 36.32 2.39
5268 7125 8.832521 TCTTATCAACAAGTGTTAATCGTTTGT 58.167 29.630 0.00 0.00 36.32 2.83
5269 7126 9.658475 TTCTTATCAACAAGTGTTAATCGTTTG 57.342 29.630 0.00 0.00 36.32 2.93
5270 7127 9.659830 GTTCTTATCAACAAGTGTTAATCGTTT 57.340 29.630 0.00 0.00 36.32 3.60
5271 7128 8.287503 GGTTCTTATCAACAAGTGTTAATCGTT 58.712 33.333 0.00 0.00 36.32 3.85
5272 7129 7.442969 TGGTTCTTATCAACAAGTGTTAATCGT 59.557 33.333 0.00 0.00 36.32 3.73
5273 7130 7.802738 TGGTTCTTATCAACAAGTGTTAATCG 58.197 34.615 0.00 0.00 36.32 3.34
5300 7157 9.367444 CTCGGTTGTTATCTACACTTTCTTATT 57.633 33.333 0.00 0.00 36.21 1.40
5301 7158 8.746530 TCTCGGTTGTTATCTACACTTTCTTAT 58.253 33.333 0.00 0.00 36.21 1.73
5302 7159 8.114331 TCTCGGTTGTTATCTACACTTTCTTA 57.886 34.615 0.00 0.00 36.21 2.10
5303 7160 6.989659 TCTCGGTTGTTATCTACACTTTCTT 58.010 36.000 0.00 0.00 36.21 2.52
5304 7161 6.585695 TCTCGGTTGTTATCTACACTTTCT 57.414 37.500 0.00 0.00 36.21 2.52
5305 7162 8.922058 TTATCTCGGTTGTTATCTACACTTTC 57.078 34.615 0.00 0.00 36.21 2.62
5306 7163 9.715121 TTTTATCTCGGTTGTTATCTACACTTT 57.285 29.630 0.00 0.00 36.21 2.66
5307 7164 9.886132 ATTTTATCTCGGTTGTTATCTACACTT 57.114 29.630 0.00 0.00 36.21 3.16
5335 7192 9.769093 GAACAAGTGTTATTCGCTTATGTAATT 57.231 29.630 0.00 0.00 43.90 1.40
5336 7193 8.941977 TGAACAAGTGTTATTCGCTTATGTAAT 58.058 29.630 0.00 0.00 43.90 1.89
5337 7194 8.312896 TGAACAAGTGTTATTCGCTTATGTAA 57.687 30.769 0.00 0.00 43.90 2.41
5338 7195 7.892778 TGAACAAGTGTTATTCGCTTATGTA 57.107 32.000 0.00 0.00 43.90 2.29
5339 7196 6.795098 TGAACAAGTGTTATTCGCTTATGT 57.205 33.333 0.00 0.00 43.90 2.29
5340 7197 9.210426 GTTATGAACAAGTGTTATTCGCTTATG 57.790 33.333 0.00 0.00 43.90 1.90
5341 7198 8.941977 TGTTATGAACAAGTGTTATTCGCTTAT 58.058 29.630 0.00 0.00 43.90 1.73
5342 7199 8.225107 GTGTTATGAACAAGTGTTATTCGCTTA 58.775 33.333 0.00 0.00 43.90 3.09
5343 7200 7.041372 AGTGTTATGAACAAGTGTTATTCGCTT 60.041 33.333 0.00 0.00 46.24 4.68
5344 7201 6.426937 AGTGTTATGAACAAGTGTTATTCGCT 59.573 34.615 0.00 0.00 44.16 4.93
5345 7202 6.599437 AGTGTTATGAACAAGTGTTATTCGC 58.401 36.000 0.00 0.00 44.16 4.70
5346 7203 8.067784 ACAAGTGTTATGAACAAGTGTTATTCG 58.932 33.333 0.00 0.00 44.16 3.34
5347 7204 9.730420 AACAAGTGTTATGAACAAGTGTTATTC 57.270 29.630 15.15 0.00 43.32 1.75
5505 7786 4.410099 TGAATCAATTCAGAGCTTGGGTT 58.590 39.130 1.30 0.00 41.51 4.11
5669 7962 1.127213 GCAAAATCATTGTGGCTTGCG 59.873 47.619 0.00 0.00 30.95 4.85
5745 10414 1.078426 TAGAGGAAAAGCTGCGGGC 60.078 57.895 0.00 0.00 42.19 6.13
5819 10488 4.447342 GGTGTGGGAGGGCCATGG 62.447 72.222 7.63 7.63 35.15 3.66
5825 10494 1.686325 CGTGATAGGGTGTGGGAGGG 61.686 65.000 0.00 0.00 0.00 4.30
5834 10503 1.457831 GAGGGAGGCGTGATAGGGT 60.458 63.158 0.00 0.00 0.00 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.