Multiple sequence alignment - TraesCS5A01G151300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G151300 chr5A 100.000 3954 0 0 1 3954 328802108 328806061 0.000000e+00 7302.0
1 TraesCS5A01G151300 chr5A 88.085 235 22 3 470 704 503771650 503771422 1.400000e-69 274.0
2 TraesCS5A01G151300 chr5A 92.308 104 7 1 2592 2694 698639622 698639725 3.180000e-31 147.0
3 TraesCS5A01G151300 chr5D 93.266 2985 139 32 241 3182 244621790 244624755 0.000000e+00 4342.0
4 TraesCS5A01G151300 chr5D 92.424 264 13 5 1 257 244621517 244621780 1.740000e-98 370.0
5 TraesCS5A01G151300 chr5D 92.233 103 5 1 2597 2699 250069618 250069717 4.120000e-30 143.0
6 TraesCS5A01G151300 chr5D 94.805 77 4 0 3397 3473 244624751 244624827 1.930000e-23 121.0
7 TraesCS5A01G151300 chr5B 90.524 3208 179 51 1 3143 278009265 278012412 0.000000e+00 4124.0
8 TraesCS5A01G151300 chr5B 97.854 233 4 1 3180 3411 253187144 253187376 6.150000e-108 401.0
9 TraesCS5A01G151300 chr5B 97.854 233 4 1 3180 3411 520851323 520851555 6.150000e-108 401.0
10 TraesCS5A01G151300 chr5B 97.854 233 4 1 3180 3411 585478063 585478295 6.150000e-108 401.0
11 TraesCS5A01G151300 chr5B 94.792 96 3 2 2605 2698 461134383 461134478 8.850000e-32 148.0
12 TraesCS5A01G151300 chr2A 88.430 484 36 11 3475 3954 524950322 524950789 2.060000e-157 566.0
13 TraesCS5A01G151300 chr2A 88.773 481 22 18 3475 3941 18034130 18033668 9.600000e-156 560.0
14 TraesCS5A01G151300 chr2A 78.491 265 29 16 2041 2294 324633797 324633550 8.850000e-32 148.0
15 TraesCS5A01G151300 chr3B 86.200 500 43 16 3470 3954 545669976 545670464 5.860000e-143 518.0
16 TraesCS5A01G151300 chr3B 100.000 221 0 0 3183 3403 69370464 69370244 3.680000e-110 409.0
17 TraesCS5A01G151300 chr2B 97.521 242 4 2 3165 3406 163231029 163230790 2.840000e-111 412.0
18 TraesCS5A01G151300 chr2B 88.776 196 19 3 3473 3668 62761340 62761532 1.840000e-58 237.0
19 TraesCS5A01G151300 chr2B 91.925 161 13 0 3475 3635 784270424 784270264 3.980000e-55 226.0
20 TraesCS5A01G151300 chr2B 88.732 142 16 0 3813 3954 62761594 62761735 1.460000e-39 174.0
21 TraesCS5A01G151300 chr2B 93.204 103 6 1 2594 2696 21211470 21211571 2.460000e-32 150.0
22 TraesCS5A01G151300 chr2B 78.539 219 36 9 2031 2240 66667769 66667985 2.480000e-27 134.0
23 TraesCS5A01G151300 chr4D 99.123 228 1 1 3184 3410 428943072 428942845 3.680000e-110 409.0
24 TraesCS5A01G151300 chr7A 98.684 228 2 1 3178 3405 48484315 48484089 1.710000e-108 403.0
25 TraesCS5A01G151300 chr1B 98.684 228 2 1 3180 3407 561755676 561755450 1.710000e-108 403.0
26 TraesCS5A01G151300 chr1B 84.541 207 24 8 3473 3673 429911669 429911465 8.670000e-47 198.0
27 TraesCS5A01G151300 chrUn 96.694 242 5 3 3183 3421 311486153 311485912 2.210000e-107 399.0
28 TraesCS5A01G151300 chr4B 82.268 485 40 24 3471 3954 253778212 253777773 1.040000e-100 377.0
29 TraesCS5A01G151300 chr4B 86.000 200 22 3 3474 3673 536114250 536114057 4.000000e-50 209.0
30 TraesCS5A01G151300 chr4B 88.024 167 17 1 3791 3954 536114002 536113836 1.120000e-45 195.0
31 TraesCS5A01G151300 chr4B 79.487 273 29 15 2034 2293 565735133 565735391 6.800000e-38 169.0
32 TraesCS5A01G151300 chr7B 90.476 168 16 0 3464 3631 551062352 551062519 5.140000e-54 222.0
33 TraesCS5A01G151300 chr6B 79.130 345 47 17 3616 3954 3587584 3587259 8.610000e-52 215.0
34 TraesCS5A01G151300 chr6B 93.662 142 9 0 3813 3954 3571754 3571613 3.100000e-51 213.0
35 TraesCS5A01G151300 chr6B 76.712 219 38 11 2031 2245 710663834 710663625 4.180000e-20 110.0
36 TraesCS5A01G151300 chr6B 75.336 223 37 15 2031 2246 711317345 711317134 1.510000e-14 91.6
37 TraesCS5A01G151300 chr6B 80.392 102 18 2 500 601 47268416 47268317 4.240000e-10 76.8
38 TraesCS5A01G151300 chr4A 85.549 173 20 5 3460 3630 619765774 619765605 4.060000e-40 176.0
39 TraesCS5A01G151300 chr2D 93.939 99 5 1 2607 2704 15192879 15192977 8.850000e-32 148.0
40 TraesCS5A01G151300 chr6D 93.069 101 5 2 2610 2710 59623259 59623161 3.180000e-31 147.0
41 TraesCS5A01G151300 chr6D 76.364 220 39 11 2031 2246 466224900 466224690 5.400000e-19 106.0
42 TraesCS5A01G151300 chr1A 88.696 115 10 2 2596 2710 427520594 427520483 1.920000e-28 137.0
43 TraesCS5A01G151300 chr3D 77.533 227 38 11 2031 2246 443422349 443422573 1.490000e-24 124.0
44 TraesCS5A01G151300 chr3D 100.000 32 0 0 2031 2062 443365064 443365095 4.270000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G151300 chr5A 328802108 328806061 3953 False 7302 7302 100.000000 1 3954 1 chr5A.!!$F1 3953
1 TraesCS5A01G151300 chr5D 244621517 244624827 3310 False 1611 4342 93.498333 1 3473 3 chr5D.!!$F2 3472
2 TraesCS5A01G151300 chr5B 278009265 278012412 3147 False 4124 4124 90.524000 1 3143 1 chr5B.!!$F2 3142

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
363 400 0.108804 TTGCGGCTCTTCCTAGAACG 60.109 55.0 0.00 0.00 35.28 3.95 F
476 513 0.517316 GGTCCCGCATATCGCAAATC 59.483 55.0 0.00 0.00 42.60 2.17 F
1558 1673 0.761802 GGATGAGGAGGACCATGGTC 59.238 60.0 33.14 33.14 43.87 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1539 1654 0.761802 GACCATGGTCCTCCTCATCC 59.238 60.000 31.37 5.37 39.08 3.51 R
1697 1815 1.873591 GCAATACCAATACCTGAGGCG 59.126 52.381 0.00 0.00 0.00 5.52 R
3547 3693 0.043637 TCCCCATAAGTCCCTTCCGT 59.956 55.000 0.00 0.00 0.00 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.009675 CTCGTGGTTTGTGCTGTGC 60.010 57.895 0.00 0.00 0.00 4.57
47 48 3.044305 GTGCTGTCTCGTGGTGGC 61.044 66.667 0.00 0.00 0.00 5.01
56 57 2.738521 CGTGGTGGCGAGAAGGTG 60.739 66.667 0.00 0.00 0.00 4.00
202 203 3.497262 CGTGGTTTTTCTCTACCTTCCAC 59.503 47.826 0.00 0.00 40.13 4.02
204 205 3.460340 TGGTTTTTCTCTACCTTCCACCA 59.540 43.478 0.00 0.00 35.41 4.17
253 286 4.474651 TCATCCCATGGATCTTAACAGTGT 59.525 41.667 15.22 0.00 40.98 3.55
316 353 4.441356 GCTTAGAGCAACTCTAGCAGATGT 60.441 45.833 15.23 0.00 42.92 3.06
319 356 3.513119 AGAGCAACTCTAGCAGATGTTGA 59.487 43.478 19.64 0.00 39.28 3.18
354 391 1.111277 AAAACCAGTTTGCGGCTCTT 58.889 45.000 0.00 0.00 32.36 2.85
359 396 1.363744 CAGTTTGCGGCTCTTCCTAG 58.636 55.000 0.00 0.00 0.00 3.02
363 400 0.108804 TTGCGGCTCTTCCTAGAACG 60.109 55.000 0.00 0.00 35.28 3.95
389 426 1.400846 GCGGTATCACGAGACTTCAGA 59.599 52.381 0.00 0.00 35.47 3.27
391 428 2.418976 CGGTATCACGAGACTTCAGACA 59.581 50.000 0.00 0.00 35.47 3.41
395 432 5.163602 GGTATCACGAGACTTCAGACAGAAT 60.164 44.000 0.00 0.00 35.25 2.40
396 433 4.855715 TCACGAGACTTCAGACAGAATT 57.144 40.909 0.00 0.00 35.25 2.17
458 495 2.253758 CGGCATATGTTCCGCCTGG 61.254 63.158 8.56 0.00 43.95 4.45
468 505 3.941188 CCGCCTGGTCCCGCATAT 61.941 66.667 0.00 0.00 0.00 1.78
469 506 2.357517 CGCCTGGTCCCGCATATC 60.358 66.667 0.00 0.00 0.00 1.63
470 507 2.357517 GCCTGGTCCCGCATATCG 60.358 66.667 0.00 0.00 38.08 2.92
472 509 2.421314 CTGGTCCCGCATATCGCA 59.579 61.111 0.00 0.00 42.60 5.10
473 510 1.227527 CTGGTCCCGCATATCGCAA 60.228 57.895 0.00 0.00 42.60 4.85
474 511 0.813610 CTGGTCCCGCATATCGCAAA 60.814 55.000 0.00 0.00 42.60 3.68
476 513 0.517316 GGTCCCGCATATCGCAAATC 59.483 55.000 0.00 0.00 42.60 2.17
477 514 1.512926 GTCCCGCATATCGCAAATCT 58.487 50.000 0.00 0.00 42.60 2.40
504 580 9.237846 GTTTTAGTTAGATAGGCAAAATCATGC 57.762 33.333 0.00 0.00 45.67 4.06
517 593 7.017055 GGCAAAATCATGCTTTTGAACAATAC 58.983 34.615 29.57 14.80 44.97 1.89
518 594 7.095102 GGCAAAATCATGCTTTTGAACAATACT 60.095 33.333 29.57 0.00 44.97 2.12
519 595 8.924691 GCAAAATCATGCTTTTGAACAATACTA 58.075 29.630 29.57 0.00 44.97 1.82
868 968 1.817099 GGAATCGCCTGCCTGACTG 60.817 63.158 0.00 0.00 0.00 3.51
869 969 1.219124 GAATCGCCTGCCTGACTGA 59.781 57.895 0.00 0.00 0.00 3.41
870 970 0.809241 GAATCGCCTGCCTGACTGAG 60.809 60.000 0.00 0.00 0.00 3.35
1255 1355 3.073678 TCTGATCAATGTGGTGGTTTCG 58.926 45.455 0.00 0.00 0.00 3.46
1284 1384 1.134670 CGGCTTCAACCCTAGGAGAAG 60.135 57.143 23.39 23.39 39.43 2.85
1285 1385 2.031258 GCTTCAACCCTAGGAGAAGC 57.969 55.000 30.30 30.30 46.78 3.86
1331 1432 6.611381 TGATTCGCCTATTTCTTGTTTCTTG 58.389 36.000 0.00 0.00 0.00 3.02
1360 1461 5.700846 TCTGTCGTTGACTTAAGATCACTC 58.299 41.667 10.09 0.00 33.15 3.51
1396 1507 1.864711 TGTGCGTCTTGTCAGTTTAGC 59.135 47.619 0.00 0.00 0.00 3.09
1539 1654 7.542025 TCAATGATGATGAGTATGGATCTACG 58.458 38.462 0.00 0.00 0.00 3.51
1558 1673 0.761802 GGATGAGGAGGACCATGGTC 59.238 60.000 33.14 33.14 43.87 4.02
1570 1685 1.423921 ACCATGGTCCGTTCCTTTCTT 59.576 47.619 13.00 0.00 0.00 2.52
1586 1701 9.031537 GTTCCTTTCTTTATTATTTTCAGGGGA 57.968 33.333 0.00 0.00 0.00 4.81
1750 1874 6.090783 TCAGAGATAACACATTCACGTACAC 58.909 40.000 0.00 0.00 0.00 2.90
1844 1968 7.781324 AATCCATCTTTGTAACAACATTCCT 57.219 32.000 0.00 0.00 0.00 3.36
1893 2017 5.049198 CGTGTGCCTCTAATGCATTTGATAT 60.049 40.000 21.19 0.00 41.46 1.63
1905 2031 6.839124 TGCATTTGATATGAACAAGAACCT 57.161 33.333 0.00 0.00 0.00 3.50
1916 2042 7.944729 ATGAACAAGAACCTAAGTTATGCAT 57.055 32.000 3.79 3.79 35.94 3.96
1958 2090 3.243301 CCTGTCATGCCATGTTAGATTGC 60.243 47.826 4.31 0.00 0.00 3.56
1970 2102 6.543465 CCATGTTAGATTGCCTCACTATTGAA 59.457 38.462 0.00 0.00 0.00 2.69
1971 2103 7.255035 CCATGTTAGATTGCCTCACTATTGAAG 60.255 40.741 0.00 0.00 0.00 3.02
2375 2515 2.417933 GAGACAGTGCATGCGAAAAGAT 59.582 45.455 14.09 0.00 0.00 2.40
2507 2649 3.553715 GGCAAGGAAAAGCTTTGGAGAAG 60.554 47.826 13.54 3.14 34.42 2.85
2722 2865 8.669055 TTCTTGATGGTAACTAGGGTACTTAA 57.331 34.615 0.00 0.00 37.61 1.85
2739 2882 7.093640 GGGTACTTAAAAGATTTTTACCCCTGG 60.094 40.741 18.03 0.00 41.27 4.45
3033 3176 3.719268 TGTGGCACCTAATGATCTGTT 57.281 42.857 16.26 0.00 0.00 3.16
3138 3284 3.641437 TTAGAAATGTTGTGTGGCTGC 57.359 42.857 0.00 0.00 0.00 5.25
3155 3301 2.554032 GCTGCTGGTTGTGTACTTCAAT 59.446 45.455 7.17 0.00 0.00 2.57
3180 3326 5.674569 GCAGTGCAGTGGTAAATGATAGTTG 60.675 44.000 22.71 0.00 0.00 3.16
3181 3327 5.412594 CAGTGCAGTGGTAAATGATAGTTGT 59.587 40.000 14.08 0.00 0.00 3.32
3182 3328 5.412594 AGTGCAGTGGTAAATGATAGTTGTG 59.587 40.000 0.00 0.00 0.00 3.33
3183 3329 5.181245 GTGCAGTGGTAAATGATAGTTGTGT 59.819 40.000 0.00 0.00 0.00 3.72
3184 3330 6.370442 GTGCAGTGGTAAATGATAGTTGTGTA 59.630 38.462 0.00 0.00 0.00 2.90
3185 3331 6.370442 TGCAGTGGTAAATGATAGTTGTGTAC 59.630 38.462 0.00 0.00 0.00 2.90
3186 3332 6.594159 GCAGTGGTAAATGATAGTTGTGTACT 59.406 38.462 0.00 0.00 41.04 2.73
3187 3333 7.201530 GCAGTGGTAAATGATAGTTGTGTACTC 60.202 40.741 0.00 0.00 38.33 2.59
3188 3334 7.277981 CAGTGGTAAATGATAGTTGTGTACTCC 59.722 40.741 0.00 0.00 38.33 3.85
3189 3335 6.537660 GTGGTAAATGATAGTTGTGTACTCCC 59.462 42.308 0.00 0.00 38.33 4.30
3190 3336 6.442564 TGGTAAATGATAGTTGTGTACTCCCT 59.557 38.462 0.00 0.00 38.33 4.20
3191 3337 6.985059 GGTAAATGATAGTTGTGTACTCCCTC 59.015 42.308 0.00 0.00 38.33 4.30
3192 3338 5.615925 AATGATAGTTGTGTACTCCCTCC 57.384 43.478 0.00 0.00 38.33 4.30
3193 3339 3.021695 TGATAGTTGTGTACTCCCTCCG 58.978 50.000 0.00 0.00 38.33 4.63
3194 3340 2.592102 TAGTTGTGTACTCCCTCCGT 57.408 50.000 0.00 0.00 38.33 4.69
3195 3341 1.254954 AGTTGTGTACTCCCTCCGTC 58.745 55.000 0.00 0.00 28.23 4.79
3196 3342 0.245813 GTTGTGTACTCCCTCCGTCC 59.754 60.000 0.00 0.00 0.00 4.79
3197 3343 1.246056 TTGTGTACTCCCTCCGTCCG 61.246 60.000 0.00 0.00 0.00 4.79
3198 3344 2.044650 TGTACTCCCTCCGTCCGG 60.045 66.667 0.00 0.00 0.00 5.14
3199 3345 2.832201 GTACTCCCTCCGTCCGGG 60.832 72.222 0.00 0.00 43.38 5.73
3200 3346 3.341629 TACTCCCTCCGTCCGGGT 61.342 66.667 0.00 0.00 42.56 5.28
3201 3347 3.650298 TACTCCCTCCGTCCGGGTG 62.650 68.421 0.00 0.00 42.56 4.61
3203 3349 3.650298 CTCCCTCCGTCCGGGTGTA 62.650 68.421 0.00 0.00 42.56 2.90
3204 3350 2.443390 CCCTCCGTCCGGGTGTAT 60.443 66.667 0.00 0.00 36.91 2.29
3205 3351 1.152694 CCCTCCGTCCGGGTGTATA 60.153 63.158 0.00 0.00 36.91 1.47
3206 3352 0.756442 CCCTCCGTCCGGGTGTATAA 60.756 60.000 0.00 0.00 36.91 0.98
3207 3353 0.672342 CCTCCGTCCGGGTGTATAAG 59.328 60.000 0.00 0.00 37.00 1.73
3208 3354 1.396653 CTCCGTCCGGGTGTATAAGT 58.603 55.000 0.00 0.00 37.00 2.24
3209 3355 1.336125 CTCCGTCCGGGTGTATAAGTC 59.664 57.143 0.00 0.00 37.00 3.01
3210 3356 1.105457 CCGTCCGGGTGTATAAGTCA 58.895 55.000 0.00 0.00 0.00 3.41
3211 3357 1.684983 CCGTCCGGGTGTATAAGTCAT 59.315 52.381 0.00 0.00 0.00 3.06
3212 3358 2.101917 CCGTCCGGGTGTATAAGTCATT 59.898 50.000 0.00 0.00 0.00 2.57
3213 3359 3.378339 CGTCCGGGTGTATAAGTCATTC 58.622 50.000 0.00 0.00 0.00 2.67
3214 3360 3.378339 GTCCGGGTGTATAAGTCATTCG 58.622 50.000 0.00 0.00 0.00 3.34
3215 3361 2.132762 CCGGGTGTATAAGTCATTCGC 58.867 52.381 0.00 0.00 0.00 4.70
3216 3362 1.784856 CGGGTGTATAAGTCATTCGCG 59.215 52.381 0.00 0.00 0.00 5.87
3217 3363 2.797087 CGGGTGTATAAGTCATTCGCGT 60.797 50.000 5.77 0.00 0.00 6.01
3218 3364 3.548616 CGGGTGTATAAGTCATTCGCGTA 60.549 47.826 5.77 0.00 0.00 4.42
3219 3365 3.979495 GGGTGTATAAGTCATTCGCGTAG 59.021 47.826 5.77 0.00 0.00 3.51
3220 3366 4.498682 GGGTGTATAAGTCATTCGCGTAGT 60.499 45.833 5.77 0.00 0.00 2.73
3221 3367 5.039333 GGTGTATAAGTCATTCGCGTAGTT 58.961 41.667 5.77 2.59 0.00 2.24
3222 3368 5.172771 GGTGTATAAGTCATTCGCGTAGTTC 59.827 44.000 5.77 0.00 0.00 3.01
3223 3369 5.970023 GTGTATAAGTCATTCGCGTAGTTCT 59.030 40.000 5.77 0.00 0.00 3.01
3224 3370 7.128331 GTGTATAAGTCATTCGCGTAGTTCTA 58.872 38.462 5.77 0.00 0.00 2.10
3225 3371 7.320797 GTGTATAAGTCATTCGCGTAGTTCTAG 59.679 40.741 5.77 0.00 0.00 2.43
3226 3372 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
3227 3373 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
3228 3374 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
3229 3375 3.011818 TCATTCGCGTAGTTCTAGGTCA 58.988 45.455 5.77 0.00 0.00 4.02
3230 3376 3.630769 TCATTCGCGTAGTTCTAGGTCAT 59.369 43.478 5.77 0.00 0.00 3.06
3231 3377 3.687572 TTCGCGTAGTTCTAGGTCATC 57.312 47.619 5.77 0.00 0.00 2.92
3232 3378 1.596260 TCGCGTAGTTCTAGGTCATCG 59.404 52.381 5.77 0.00 0.00 3.84
3233 3379 1.596260 CGCGTAGTTCTAGGTCATCGA 59.404 52.381 0.00 0.00 0.00 3.59
3234 3380 2.223611 CGCGTAGTTCTAGGTCATCGAT 59.776 50.000 0.00 0.00 0.00 3.59
3235 3381 3.303857 CGCGTAGTTCTAGGTCATCGATT 60.304 47.826 0.00 0.00 0.00 3.34
3236 3382 4.608951 GCGTAGTTCTAGGTCATCGATTT 58.391 43.478 0.00 0.00 0.00 2.17
3237 3383 4.441415 GCGTAGTTCTAGGTCATCGATTTG 59.559 45.833 0.00 0.00 0.00 2.32
3238 3384 5.732528 GCGTAGTTCTAGGTCATCGATTTGA 60.733 44.000 0.00 0.00 0.00 2.69
3239 3385 5.910166 CGTAGTTCTAGGTCATCGATTTGAG 59.090 44.000 0.00 0.00 0.00 3.02
3240 3386 5.269505 AGTTCTAGGTCATCGATTTGAGG 57.730 43.478 0.00 0.00 0.00 3.86
3241 3387 4.956700 AGTTCTAGGTCATCGATTTGAGGA 59.043 41.667 0.00 0.00 34.44 3.71
3242 3388 5.422331 AGTTCTAGGTCATCGATTTGAGGAA 59.578 40.000 0.00 0.00 39.46 3.36
3243 3389 6.098982 AGTTCTAGGTCATCGATTTGAGGAAT 59.901 38.462 0.00 0.00 39.46 3.01
3244 3390 6.485830 TCTAGGTCATCGATTTGAGGAATT 57.514 37.500 0.00 0.00 39.46 2.17
3245 3391 7.597288 TCTAGGTCATCGATTTGAGGAATTA 57.403 36.000 0.00 0.00 39.46 1.40
3246 3392 8.018537 TCTAGGTCATCGATTTGAGGAATTAA 57.981 34.615 0.00 0.00 39.46 1.40
3247 3393 8.482943 TCTAGGTCATCGATTTGAGGAATTAAA 58.517 33.333 0.00 0.00 39.46 1.52
3248 3394 9.277783 CTAGGTCATCGATTTGAGGAATTAAAT 57.722 33.333 0.00 0.00 39.46 1.40
3250 3396 9.799106 AGGTCATCGATTTGAGGAATTAAATAT 57.201 29.630 0.00 0.00 39.46 1.28
3251 3397 9.831737 GGTCATCGATTTGAGGAATTAAATATG 57.168 33.333 0.00 0.00 39.46 1.78
3287 3433 9.832445 TCATGAAAAGTATACCACTAGATTTCC 57.168 33.333 0.00 0.00 36.04 3.13
3288 3434 9.613428 CATGAAAAGTATACCACTAGATTTCCA 57.387 33.333 0.00 0.00 36.04 3.53
3289 3435 9.614792 ATGAAAAGTATACCACTAGATTTCCAC 57.385 33.333 0.00 0.00 36.04 4.02
3290 3436 8.598916 TGAAAAGTATACCACTAGATTTCCACA 58.401 33.333 0.00 0.00 36.04 4.17
3291 3437 8.788325 AAAAGTATACCACTAGATTTCCACAC 57.212 34.615 0.00 0.00 36.04 3.82
3292 3438 6.145338 AGTATACCACTAGATTTCCACACG 57.855 41.667 0.00 0.00 34.98 4.49
3293 3439 2.762535 ACCACTAGATTTCCACACGG 57.237 50.000 0.00 0.00 0.00 4.94
3294 3440 2.253610 ACCACTAGATTTCCACACGGA 58.746 47.619 0.00 0.00 40.60 4.69
3295 3441 2.838202 ACCACTAGATTTCCACACGGAT 59.162 45.455 0.00 0.00 42.41 4.18
3296 3442 3.198068 CCACTAGATTTCCACACGGATG 58.802 50.000 0.00 0.00 42.41 3.51
3297 3443 3.369471 CCACTAGATTTCCACACGGATGT 60.369 47.826 0.00 0.00 42.41 3.06
3298 3444 4.142026 CCACTAGATTTCCACACGGATGTA 60.142 45.833 0.00 0.00 42.41 2.29
3299 3445 5.043903 CACTAGATTTCCACACGGATGTAG 58.956 45.833 0.00 0.00 42.41 2.74
3300 3446 4.710375 ACTAGATTTCCACACGGATGTAGT 59.290 41.667 0.00 0.00 42.41 2.73
3301 3447 4.553330 AGATTTCCACACGGATGTAGTT 57.447 40.909 0.00 0.00 42.41 2.24
3302 3448 4.906618 AGATTTCCACACGGATGTAGTTT 58.093 39.130 0.00 0.00 42.41 2.66
3303 3449 4.695455 AGATTTCCACACGGATGTAGTTTG 59.305 41.667 0.00 0.00 42.41 2.93
3304 3450 3.478857 TTCCACACGGATGTAGTTTGT 57.521 42.857 0.00 0.00 42.41 2.83
3305 3451 4.603989 TTCCACACGGATGTAGTTTGTA 57.396 40.909 0.00 0.00 42.41 2.41
3306 3452 4.603989 TCCACACGGATGTAGTTTGTAA 57.396 40.909 0.00 0.00 36.72 2.41
3307 3453 4.958509 TCCACACGGATGTAGTTTGTAAA 58.041 39.130 0.00 0.00 36.72 2.01
3308 3454 5.553123 TCCACACGGATGTAGTTTGTAAAT 58.447 37.500 0.00 0.00 36.72 1.40
3309 3455 6.699366 TCCACACGGATGTAGTTTGTAAATA 58.301 36.000 0.00 0.00 36.72 1.40
3310 3456 7.332557 TCCACACGGATGTAGTTTGTAAATAT 58.667 34.615 0.00 0.00 36.72 1.28
3311 3457 8.476447 TCCACACGGATGTAGTTTGTAAATATA 58.524 33.333 0.00 0.00 36.72 0.86
3312 3458 9.268268 CCACACGGATGTAGTTTGTAAATATAT 57.732 33.333 0.00 0.00 36.72 0.86
3370 3516 7.859875 AGTTAAATTATCGACCTAGAACTACGC 59.140 37.037 0.00 0.00 0.00 4.42
3371 3517 3.867055 TTATCGACCTAGAACTACGCG 57.133 47.619 3.53 3.53 0.00 6.01
3372 3518 1.945387 ATCGACCTAGAACTACGCGA 58.055 50.000 15.93 0.00 0.00 5.87
3373 3519 1.725641 TCGACCTAGAACTACGCGAA 58.274 50.000 15.93 0.00 0.00 4.70
3374 3520 2.283298 TCGACCTAGAACTACGCGAAT 58.717 47.619 15.93 0.00 0.00 3.34
3375 3521 2.031314 TCGACCTAGAACTACGCGAATG 59.969 50.000 15.93 4.47 0.00 2.67
3376 3522 2.031314 CGACCTAGAACTACGCGAATGA 59.969 50.000 15.93 0.00 0.00 2.57
3377 3523 3.361414 GACCTAGAACTACGCGAATGAC 58.639 50.000 15.93 0.66 0.00 3.06
3378 3524 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
3379 3525 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
3380 3526 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
3381 3527 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
3382 3528 6.484643 ACCTAGAACTACGCGAATGACTTATA 59.515 38.462 15.93 0.00 0.00 0.98
3383 3529 6.796072 CCTAGAACTACGCGAATGACTTATAC 59.204 42.308 15.93 0.00 0.00 1.47
3384 3530 6.127810 AGAACTACGCGAATGACTTATACA 57.872 37.500 15.93 0.00 0.00 2.29
3385 3531 5.970023 AGAACTACGCGAATGACTTATACAC 59.030 40.000 15.93 0.00 0.00 2.90
3386 3532 4.604976 ACTACGCGAATGACTTATACACC 58.395 43.478 15.93 0.00 0.00 4.16
3387 3533 2.456989 ACGCGAATGACTTATACACCG 58.543 47.619 15.93 0.00 0.00 4.94
3388 3534 1.784856 CGCGAATGACTTATACACCGG 59.215 52.381 0.00 0.00 0.00 5.28
3389 3535 2.132762 GCGAATGACTTATACACCGGG 58.867 52.381 6.32 0.00 0.00 5.73
3390 3536 2.223876 GCGAATGACTTATACACCGGGA 60.224 50.000 6.32 0.00 0.00 5.14
3391 3537 3.378339 CGAATGACTTATACACCGGGAC 58.622 50.000 6.32 0.00 0.00 4.46
3437 3583 7.667283 CACTAAGATTGATTTCAGTGTACGAC 58.333 38.462 0.00 0.00 31.06 4.34
3464 3610 5.469421 GGTCTCATGATGCAGGAAATTCTAG 59.531 44.000 0.00 0.00 0.00 2.43
3473 3619 3.941483 GCAGGAAATTCTAGCTGCAAGTA 59.059 43.478 14.77 0.00 37.71 2.24
3474 3620 4.396166 GCAGGAAATTCTAGCTGCAAGTAA 59.604 41.667 14.77 0.00 37.71 2.24
3475 3621 5.448360 GCAGGAAATTCTAGCTGCAAGTAAG 60.448 44.000 14.77 0.00 37.71 2.34
3476 3622 5.877012 CAGGAAATTCTAGCTGCAAGTAAGA 59.123 40.000 1.02 0.00 35.30 2.10
3477 3623 6.036953 CAGGAAATTCTAGCTGCAAGTAAGAG 59.963 42.308 1.02 0.00 35.30 2.85
3478 3624 5.295540 GGAAATTCTAGCTGCAAGTAAGAGG 59.704 44.000 1.02 0.00 35.30 3.69
3479 3625 3.895232 TTCTAGCTGCAAGTAAGAGGG 57.105 47.619 1.02 0.00 35.30 4.30
3480 3626 2.821437 TCTAGCTGCAAGTAAGAGGGT 58.179 47.619 1.02 0.00 35.30 4.34
3481 3627 2.497675 TCTAGCTGCAAGTAAGAGGGTG 59.502 50.000 1.02 0.00 35.30 4.61
3482 3628 1.059913 AGCTGCAAGTAAGAGGGTGT 58.940 50.000 1.02 0.00 35.30 4.16
3483 3629 1.421646 AGCTGCAAGTAAGAGGGTGTT 59.578 47.619 1.02 0.00 35.30 3.32
3484 3630 2.158608 AGCTGCAAGTAAGAGGGTGTTT 60.159 45.455 1.02 0.00 35.30 2.83
3485 3631 2.030805 GCTGCAAGTAAGAGGGTGTTTG 60.031 50.000 0.00 0.00 35.30 2.93
3486 3632 3.214328 CTGCAAGTAAGAGGGTGTTTGT 58.786 45.455 0.00 0.00 0.00 2.83
3487 3633 3.626930 TGCAAGTAAGAGGGTGTTTGTT 58.373 40.909 0.00 0.00 0.00 2.83
3488 3634 4.020543 TGCAAGTAAGAGGGTGTTTGTTT 58.979 39.130 0.00 0.00 0.00 2.83
3489 3635 4.097286 TGCAAGTAAGAGGGTGTTTGTTTC 59.903 41.667 0.00 0.00 0.00 2.78
3490 3636 4.499188 GCAAGTAAGAGGGTGTTTGTTTCC 60.499 45.833 0.00 0.00 0.00 3.13
3491 3637 4.513406 AGTAAGAGGGTGTTTGTTTCCA 57.487 40.909 0.00 0.00 0.00 3.53
3492 3638 4.461198 AGTAAGAGGGTGTTTGTTTCCAG 58.539 43.478 0.00 0.00 0.00 3.86
3493 3639 2.364972 AGAGGGTGTTTGTTTCCAGG 57.635 50.000 0.00 0.00 0.00 4.45
3494 3640 1.133482 AGAGGGTGTTTGTTTCCAGGG 60.133 52.381 0.00 0.00 0.00 4.45
3495 3641 0.930726 AGGGTGTTTGTTTCCAGGGA 59.069 50.000 0.00 0.00 0.00 4.20
3496 3642 1.037493 GGGTGTTTGTTTCCAGGGAC 58.963 55.000 0.00 0.00 0.00 4.46
3497 3643 1.411074 GGGTGTTTGTTTCCAGGGACT 60.411 52.381 0.00 0.00 43.88 3.85
3498 3644 2.384828 GGTGTTTGTTTCCAGGGACTT 58.615 47.619 0.00 0.00 34.60 3.01
3499 3645 3.558033 GGTGTTTGTTTCCAGGGACTTA 58.442 45.455 0.00 0.00 34.60 2.24
3500 3646 4.149598 GGTGTTTGTTTCCAGGGACTTAT 58.850 43.478 0.00 0.00 34.60 1.73
3501 3647 4.022329 GGTGTTTGTTTCCAGGGACTTATG 60.022 45.833 0.00 0.00 34.60 1.90
3502 3648 4.022329 GTGTTTGTTTCCAGGGACTTATGG 60.022 45.833 0.00 0.00 34.60 2.74
3503 3649 3.449746 TTGTTTCCAGGGACTTATGGG 57.550 47.619 0.00 0.00 34.60 4.00
3504 3650 2.354328 TGTTTCCAGGGACTTATGGGT 58.646 47.619 0.00 0.00 34.60 4.51
3505 3651 2.307686 TGTTTCCAGGGACTTATGGGTC 59.692 50.000 0.00 0.00 34.60 4.46
3506 3652 2.576648 GTTTCCAGGGACTTATGGGTCT 59.423 50.000 0.00 0.00 34.60 3.85
3507 3653 3.778629 GTTTCCAGGGACTTATGGGTCTA 59.221 47.826 0.00 0.00 34.60 2.59
3508 3654 3.330126 TCCAGGGACTTATGGGTCTAG 57.670 52.381 0.00 0.00 34.60 2.43
3509 3655 2.090719 TCCAGGGACTTATGGGTCTAGG 60.091 54.545 0.00 0.00 34.60 3.02
3510 3656 2.330216 CAGGGACTTATGGGTCTAGGG 58.670 57.143 0.00 0.00 34.60 3.53
3511 3657 2.090719 CAGGGACTTATGGGTCTAGGGA 60.091 54.545 0.00 0.00 34.60 4.20
3512 3658 2.090663 AGGGACTTATGGGTCTAGGGAC 60.091 54.545 0.00 0.00 37.22 4.46
3513 3659 2.090663 GGGACTTATGGGTCTAGGGACT 60.091 54.545 0.00 0.00 41.82 3.85
3514 3660 3.632906 GGGACTTATGGGTCTAGGGACTT 60.633 52.174 0.00 0.00 41.82 3.01
3515 3661 4.388346 GGGACTTATGGGTCTAGGGACTTA 60.388 50.000 0.00 0.00 41.82 2.24
3516 3662 5.214293 GGACTTATGGGTCTAGGGACTTAA 58.786 45.833 0.00 0.00 41.82 1.85
3517 3663 5.664457 GGACTTATGGGTCTAGGGACTTAAA 59.336 44.000 0.00 0.00 41.82 1.52
3518 3664 6.329460 GGACTTATGGGTCTAGGGACTTAAAT 59.671 42.308 0.00 0.00 41.82 1.40
3519 3665 7.511714 GGACTTATGGGTCTAGGGACTTAAATA 59.488 40.741 0.00 0.00 41.82 1.40
3520 3666 8.865244 ACTTATGGGTCTAGGGACTTAAATAA 57.135 34.615 0.00 0.00 41.75 1.40
3521 3667 8.935741 ACTTATGGGTCTAGGGACTTAAATAAG 58.064 37.037 0.00 0.00 41.75 1.73
3536 3682 7.935405 ACTTAAATAAGTCCCAATAAGTCCCA 58.065 34.615 0.00 0.00 42.52 4.37
3537 3683 7.832685 ACTTAAATAAGTCCCAATAAGTCCCAC 59.167 37.037 0.00 0.00 42.52 4.61
3538 3684 4.790718 ATAAGTCCCAATAAGTCCCACC 57.209 45.455 0.00 0.00 0.00 4.61
3539 3685 2.361085 AGTCCCAATAAGTCCCACCT 57.639 50.000 0.00 0.00 0.00 4.00
3540 3686 3.502051 AGTCCCAATAAGTCCCACCTA 57.498 47.619 0.00 0.00 0.00 3.08
3541 3687 3.810623 AGTCCCAATAAGTCCCACCTAA 58.189 45.455 0.00 0.00 0.00 2.69
3542 3688 4.180723 AGTCCCAATAAGTCCCACCTAAA 58.819 43.478 0.00 0.00 0.00 1.85
3543 3689 4.018688 AGTCCCAATAAGTCCCACCTAAAC 60.019 45.833 0.00 0.00 0.00 2.01
3544 3690 3.267551 TCCCAATAAGTCCCACCTAAACC 59.732 47.826 0.00 0.00 0.00 3.27
3545 3691 3.010808 CCCAATAAGTCCCACCTAAACCA 59.989 47.826 0.00 0.00 0.00 3.67
3546 3692 4.509482 CCCAATAAGTCCCACCTAAACCAA 60.509 45.833 0.00 0.00 0.00 3.67
3547 3693 5.081032 CCAATAAGTCCCACCTAAACCAAA 58.919 41.667 0.00 0.00 0.00 3.28
3548 3694 5.047590 CCAATAAGTCCCACCTAAACCAAAC 60.048 44.000 0.00 0.00 0.00 2.93
3549 3695 2.265589 AGTCCCACCTAAACCAAACG 57.734 50.000 0.00 0.00 0.00 3.60
3550 3696 1.202842 AGTCCCACCTAAACCAAACGG 60.203 52.381 0.00 0.00 0.00 4.44
3551 3697 1.138568 TCCCACCTAAACCAAACGGA 58.861 50.000 0.00 0.00 0.00 4.69
3552 3698 1.493871 TCCCACCTAAACCAAACGGAA 59.506 47.619 0.00 0.00 0.00 4.30
3553 3699 1.883926 CCCACCTAAACCAAACGGAAG 59.116 52.381 0.00 0.00 0.00 3.46
3554 3700 1.883926 CCACCTAAACCAAACGGAAGG 59.116 52.381 0.00 0.00 0.00 3.46
3555 3701 1.883926 CACCTAAACCAAACGGAAGGG 59.116 52.381 0.00 0.00 0.00 3.95
3556 3702 1.776063 ACCTAAACCAAACGGAAGGGA 59.224 47.619 0.00 0.00 0.00 4.20
3557 3703 2.156917 CCTAAACCAAACGGAAGGGAC 58.843 52.381 0.00 0.00 0.00 4.46
3574 3720 4.380791 AGGGACTTATGGGGACTTATTGT 58.619 43.478 0.00 0.00 27.25 2.71
3575 3721 4.166144 AGGGACTTATGGGGACTTATTGTG 59.834 45.833 0.00 0.00 27.25 3.33
3576 3722 4.461198 GGACTTATGGGGACTTATTGTGG 58.539 47.826 0.00 0.00 0.00 4.17
3577 3723 4.079958 GGACTTATGGGGACTTATTGTGGT 60.080 45.833 0.00 0.00 0.00 4.16
3578 3724 4.855340 ACTTATGGGGACTTATTGTGGTG 58.145 43.478 0.00 0.00 0.00 4.17
3579 3725 4.538490 ACTTATGGGGACTTATTGTGGTGA 59.462 41.667 0.00 0.00 0.00 4.02
3580 3726 5.193728 ACTTATGGGGACTTATTGTGGTGAT 59.806 40.000 0.00 0.00 0.00 3.06
3581 3727 4.608170 ATGGGGACTTATTGTGGTGATT 57.392 40.909 0.00 0.00 0.00 2.57
3582 3728 4.396357 TGGGGACTTATTGTGGTGATTT 57.604 40.909 0.00 0.00 0.00 2.17
3583 3729 4.085733 TGGGGACTTATTGTGGTGATTTG 58.914 43.478 0.00 0.00 0.00 2.32
3584 3730 3.447229 GGGGACTTATTGTGGTGATTTGG 59.553 47.826 0.00 0.00 0.00 3.28
3585 3731 3.447229 GGGACTTATTGTGGTGATTTGGG 59.553 47.826 0.00 0.00 0.00 4.12
3586 3732 4.340617 GGACTTATTGTGGTGATTTGGGA 58.659 43.478 0.00 0.00 0.00 4.37
3587 3733 4.157840 GGACTTATTGTGGTGATTTGGGAC 59.842 45.833 0.00 0.00 0.00 4.46
3588 3734 4.998051 ACTTATTGTGGTGATTTGGGACT 58.002 39.130 0.00 0.00 0.00 3.85
3589 3735 5.393866 ACTTATTGTGGTGATTTGGGACTT 58.606 37.500 0.00 0.00 0.00 3.01
3590 3736 6.548321 ACTTATTGTGGTGATTTGGGACTTA 58.452 36.000 0.00 0.00 0.00 2.24
3591 3737 7.182060 ACTTATTGTGGTGATTTGGGACTTAT 58.818 34.615 0.00 0.00 0.00 1.73
3592 3738 7.673926 ACTTATTGTGGTGATTTGGGACTTATT 59.326 33.333 0.00 0.00 0.00 1.40
3593 3739 5.720371 TTGTGGTGATTTGGGACTTATTG 57.280 39.130 0.00 0.00 0.00 1.90
3594 3740 4.991776 TGTGGTGATTTGGGACTTATTGA 58.008 39.130 0.00 0.00 0.00 2.57
3595 3741 5.389520 TGTGGTGATTTGGGACTTATTGAA 58.610 37.500 0.00 0.00 0.00 2.69
3596 3742 5.835819 TGTGGTGATTTGGGACTTATTGAAA 59.164 36.000 0.00 0.00 0.00 2.69
3597 3743 6.325028 TGTGGTGATTTGGGACTTATTGAAAA 59.675 34.615 0.00 0.00 0.00 2.29
3598 3744 7.147655 TGTGGTGATTTGGGACTTATTGAAAAA 60.148 33.333 0.00 0.00 0.00 1.94
3599 3745 7.384932 GTGGTGATTTGGGACTTATTGAAAAAG 59.615 37.037 0.00 0.00 0.00 2.27
3600 3746 7.288852 TGGTGATTTGGGACTTATTGAAAAAGA 59.711 33.333 0.00 0.00 0.00 2.52
3601 3747 7.598869 GGTGATTTGGGACTTATTGAAAAAGAC 59.401 37.037 0.00 0.00 0.00 3.01
3602 3748 8.360390 GTGATTTGGGACTTATTGAAAAAGACT 58.640 33.333 0.00 0.00 0.00 3.24
3603 3749 8.576442 TGATTTGGGACTTATTGAAAAAGACTC 58.424 33.333 0.00 0.00 0.00 3.36
3604 3750 8.712228 ATTTGGGACTTATTGAAAAAGACTCT 57.288 30.769 0.00 0.00 0.00 3.24
3605 3751 7.745620 TTGGGACTTATTGAAAAAGACTCTC 57.254 36.000 0.00 0.00 0.00 3.20
3606 3752 6.238648 TGGGACTTATTGAAAAAGACTCTCC 58.761 40.000 0.00 0.00 0.00 3.71
3607 3753 5.648526 GGGACTTATTGAAAAAGACTCTCCC 59.351 44.000 0.00 0.00 31.91 4.30
3608 3754 6.238648 GGACTTATTGAAAAAGACTCTCCCA 58.761 40.000 0.00 0.00 0.00 4.37
3609 3755 6.372937 GGACTTATTGAAAAAGACTCTCCCAG 59.627 42.308 0.00 0.00 0.00 4.45
3610 3756 7.079451 ACTTATTGAAAAAGACTCTCCCAGA 57.921 36.000 0.00 0.00 0.00 3.86
3612 3758 4.357918 TTGAAAAAGACTCTCCCAGAGG 57.642 45.455 5.54 0.00 46.45 3.69
3613 3759 3.587498 TGAAAAAGACTCTCCCAGAGGA 58.413 45.455 5.54 0.00 46.45 3.71
3625 3771 2.629336 CCAGAGGAGCTTATTGGGAC 57.371 55.000 0.00 0.00 0.00 4.46
3626 3772 2.122768 CCAGAGGAGCTTATTGGGACT 58.877 52.381 0.00 0.00 0.00 3.85
3627 3773 2.507471 CCAGAGGAGCTTATTGGGACTT 59.493 50.000 0.00 0.00 0.00 3.01
3628 3774 3.711704 CCAGAGGAGCTTATTGGGACTTA 59.288 47.826 0.00 0.00 0.00 2.24
3629 3775 4.349342 CCAGAGGAGCTTATTGGGACTTAT 59.651 45.833 0.00 0.00 0.00 1.73
3630 3776 5.512232 CCAGAGGAGCTTATTGGGACTTATC 60.512 48.000 0.00 0.00 0.00 1.75
3631 3777 4.282195 AGAGGAGCTTATTGGGACTTATCG 59.718 45.833 0.00 0.00 0.00 2.92
3632 3778 4.223953 AGGAGCTTATTGGGACTTATCGA 58.776 43.478 0.00 0.00 0.00 3.59
3633 3779 4.841246 AGGAGCTTATTGGGACTTATCGAT 59.159 41.667 2.16 2.16 0.00 3.59
3634 3780 5.046950 AGGAGCTTATTGGGACTTATCGATC 60.047 44.000 0.00 0.00 0.00 3.69
3635 3781 4.810790 AGCTTATTGGGACTTATCGATCG 58.189 43.478 9.36 9.36 0.00 3.69
3636 3782 3.368236 GCTTATTGGGACTTATCGATCGC 59.632 47.826 11.09 0.00 0.00 4.58
3637 3783 4.556233 CTTATTGGGACTTATCGATCGCA 58.444 43.478 11.09 0.00 36.14 5.10
3638 3784 2.218953 TTGGGACTTATCGATCGCAC 57.781 50.000 11.09 0.00 37.49 5.34
3639 3785 0.387929 TGGGACTTATCGATCGCACC 59.612 55.000 11.09 6.85 33.30 5.01
3640 3786 0.674534 GGGACTTATCGATCGCACCT 59.325 55.000 11.09 0.00 0.00 4.00
3641 3787 1.603172 GGGACTTATCGATCGCACCTG 60.603 57.143 11.09 1.96 0.00 4.00
3642 3788 1.603172 GGACTTATCGATCGCACCTGG 60.603 57.143 11.09 0.00 0.00 4.45
3643 3789 0.389391 ACTTATCGATCGCACCTGGG 59.611 55.000 11.09 0.00 0.00 4.45
3644 3790 0.946221 CTTATCGATCGCACCTGGGC 60.946 60.000 11.09 0.00 0.00 5.36
3645 3791 2.377628 TTATCGATCGCACCTGGGCC 62.378 60.000 11.09 0.00 0.00 5.80
3709 3855 4.841617 TCTCCTCCCGCCTCGCAT 62.842 66.667 0.00 0.00 0.00 4.73
3710 3856 4.292178 CTCCTCCCGCCTCGCATC 62.292 72.222 0.00 0.00 0.00 3.91
3713 3859 3.983494 CTCCCGCCTCGCATCGAT 61.983 66.667 0.00 0.00 34.61 3.59
3714 3860 3.905705 CTCCCGCCTCGCATCGATC 62.906 68.421 0.00 0.00 34.61 3.69
3715 3861 3.983494 CCCGCCTCGCATCGATCT 61.983 66.667 0.00 0.00 34.61 2.75
3716 3862 2.429907 CCGCCTCGCATCGATCTC 60.430 66.667 0.00 0.00 34.61 2.75
3717 3863 2.429907 CGCCTCGCATCGATCTCC 60.430 66.667 0.00 0.00 34.61 3.71
3718 3864 2.913765 CGCCTCGCATCGATCTCCT 61.914 63.158 0.00 0.00 34.61 3.69
3719 3865 1.365633 GCCTCGCATCGATCTCCTT 59.634 57.895 0.00 0.00 34.61 3.36
3720 3866 0.665972 GCCTCGCATCGATCTCCTTC 60.666 60.000 0.00 0.00 34.61 3.46
3721 3867 0.038709 CCTCGCATCGATCTCCTTCC 60.039 60.000 0.00 0.00 34.61 3.46
3722 3868 0.038709 CTCGCATCGATCTCCTTCCC 60.039 60.000 0.00 0.00 34.61 3.97
3723 3869 1.005630 CGCATCGATCTCCTTCCCC 60.006 63.158 0.00 0.00 0.00 4.81
3724 3870 1.373059 GCATCGATCTCCTTCCCCC 59.627 63.158 0.00 0.00 0.00 5.40
3725 3871 1.124477 GCATCGATCTCCTTCCCCCT 61.124 60.000 0.00 0.00 0.00 4.79
3726 3872 0.683973 CATCGATCTCCTTCCCCCTG 59.316 60.000 0.00 0.00 0.00 4.45
3727 3873 0.266152 ATCGATCTCCTTCCCCCTGT 59.734 55.000 0.00 0.00 0.00 4.00
3728 3874 0.397254 TCGATCTCCTTCCCCCTGTC 60.397 60.000 0.00 0.00 0.00 3.51
3729 3875 1.403687 CGATCTCCTTCCCCCTGTCC 61.404 65.000 0.00 0.00 0.00 4.02
3730 3876 1.004891 ATCTCCTTCCCCCTGTCCC 59.995 63.158 0.00 0.00 0.00 4.46
3731 3877 2.898472 ATCTCCTTCCCCCTGTCCCG 62.898 65.000 0.00 0.00 0.00 5.14
3734 3880 4.410400 CTTCCCCCTGTCCCGCAC 62.410 72.222 0.00 0.00 0.00 5.34
3738 3884 4.410400 CCCCTGTCCCGCACCTTC 62.410 72.222 0.00 0.00 0.00 3.46
3739 3885 3.322466 CCCTGTCCCGCACCTTCT 61.322 66.667 0.00 0.00 0.00 2.85
3740 3886 2.266055 CCTGTCCCGCACCTTCTC 59.734 66.667 0.00 0.00 0.00 2.87
3741 3887 2.266055 CTGTCCCGCACCTTCTCC 59.734 66.667 0.00 0.00 0.00 3.71
3742 3888 3.649277 CTGTCCCGCACCTTCTCCG 62.649 68.421 0.00 0.00 0.00 4.63
3745 3891 4.821589 CCCGCACCTTCTCCGCTC 62.822 72.222 0.00 0.00 0.00 5.03
3746 3892 4.821589 CCGCACCTTCTCCGCTCC 62.822 72.222 0.00 0.00 0.00 4.70
3747 3893 3.764466 CGCACCTTCTCCGCTCCT 61.764 66.667 0.00 0.00 0.00 3.69
3748 3894 2.665603 GCACCTTCTCCGCTCCTT 59.334 61.111 0.00 0.00 0.00 3.36
3749 3895 1.448717 GCACCTTCTCCGCTCCTTC 60.449 63.158 0.00 0.00 0.00 3.46
3750 3896 1.219393 CACCTTCTCCGCTCCTTCC 59.781 63.158 0.00 0.00 0.00 3.46
3751 3897 1.990614 ACCTTCTCCGCTCCTTCCC 60.991 63.158 0.00 0.00 0.00 3.97
3752 3898 2.736826 CCTTCTCCGCTCCTTCCCC 61.737 68.421 0.00 0.00 0.00 4.81
3753 3899 1.687493 CTTCTCCGCTCCTTCCCCT 60.687 63.158 0.00 0.00 0.00 4.79
3754 3900 1.229529 TTCTCCGCTCCTTCCCCTT 60.230 57.895 0.00 0.00 0.00 3.95
3755 3901 1.265454 TTCTCCGCTCCTTCCCCTTC 61.265 60.000 0.00 0.00 0.00 3.46
3756 3902 1.687493 CTCCGCTCCTTCCCCTTCT 60.687 63.158 0.00 0.00 0.00 2.85
3757 3903 1.965754 CTCCGCTCCTTCCCCTTCTG 61.966 65.000 0.00 0.00 0.00 3.02
3758 3904 2.124942 CGCTCCTTCCCCTTCTGC 60.125 66.667 0.00 0.00 0.00 4.26
3759 3905 2.124942 GCTCCTTCCCCTTCTGCG 60.125 66.667 0.00 0.00 0.00 5.18
3760 3906 2.124942 CTCCTTCCCCTTCTGCGC 60.125 66.667 0.00 0.00 0.00 6.09
3761 3907 3.689002 CTCCTTCCCCTTCTGCGCC 62.689 68.421 4.18 0.00 0.00 6.53
3762 3908 4.803908 CCTTCCCCTTCTGCGCCC 62.804 72.222 4.18 0.00 0.00 6.13
3784 3930 2.511373 CAAGATGCGCCGCCAGTA 60.511 61.111 6.63 0.00 0.00 2.74
3785 3931 2.202932 AAGATGCGCCGCCAGTAG 60.203 61.111 6.63 0.00 0.00 2.57
3786 3932 4.899239 AGATGCGCCGCCAGTAGC 62.899 66.667 6.63 0.00 38.52 3.58
3862 4008 4.838152 CCATGGCCGACGGTGAGG 62.838 72.222 16.73 8.94 0.00 3.86
3863 4009 3.770040 CATGGCCGACGGTGAGGA 61.770 66.667 16.73 0.00 0.00 3.71
3864 4010 3.461773 ATGGCCGACGGTGAGGAG 61.462 66.667 16.73 0.00 0.00 3.69
3867 4013 4.131088 GCCGACGGTGAGGAGGAC 62.131 72.222 16.73 0.00 0.00 3.85
3868 4014 3.812019 CCGACGGTGAGGAGGACG 61.812 72.222 5.48 0.00 0.00 4.79
3869 4015 3.812019 CGACGGTGAGGAGGACGG 61.812 72.222 0.00 0.00 0.00 4.79
3870 4016 3.450115 GACGGTGAGGAGGACGGG 61.450 72.222 0.00 0.00 0.00 5.28
3871 4017 3.933048 GACGGTGAGGAGGACGGGA 62.933 68.421 0.00 0.00 0.00 5.14
3872 4018 2.678934 CGGTGAGGAGGACGGGAA 60.679 66.667 0.00 0.00 0.00 3.97
3873 4019 2.979649 GGTGAGGAGGACGGGAAC 59.020 66.667 0.00 0.00 0.00 3.62
3889 4035 3.493767 GGAACCCTTTCTTGTCTCAGT 57.506 47.619 0.00 0.00 31.71 3.41
3890 4036 3.821748 GGAACCCTTTCTTGTCTCAGTT 58.178 45.455 0.00 0.00 31.71 3.16
3891 4037 3.815962 GGAACCCTTTCTTGTCTCAGTTC 59.184 47.826 0.00 0.00 33.34 3.01
3892 4038 3.493767 ACCCTTTCTTGTCTCAGTTCC 57.506 47.619 0.00 0.00 0.00 3.62
3893 4039 2.777692 ACCCTTTCTTGTCTCAGTTCCA 59.222 45.455 0.00 0.00 0.00 3.53
3894 4040 3.142174 CCCTTTCTTGTCTCAGTTCCAC 58.858 50.000 0.00 0.00 0.00 4.02
3895 4041 2.802816 CCTTTCTTGTCTCAGTTCCACG 59.197 50.000 0.00 0.00 0.00 4.94
3896 4042 1.865865 TTCTTGTCTCAGTTCCACGC 58.134 50.000 0.00 0.00 0.00 5.34
3897 4043 0.318699 TCTTGTCTCAGTTCCACGCG 60.319 55.000 3.53 3.53 0.00 6.01
3898 4044 0.318699 CTTGTCTCAGTTCCACGCGA 60.319 55.000 15.93 0.00 0.00 5.87
3899 4045 0.596600 TTGTCTCAGTTCCACGCGAC 60.597 55.000 15.93 0.00 0.00 5.19
3900 4046 1.286260 GTCTCAGTTCCACGCGACT 59.714 57.895 15.93 1.68 0.00 4.18
3901 4047 0.729816 GTCTCAGTTCCACGCGACTC 60.730 60.000 15.93 0.00 0.00 3.36
3902 4048 1.170290 TCTCAGTTCCACGCGACTCA 61.170 55.000 15.93 0.00 0.00 3.41
3903 4049 0.109086 CTCAGTTCCACGCGACTCAT 60.109 55.000 15.93 0.00 0.00 2.90
3904 4050 0.109272 TCAGTTCCACGCGACTCATC 60.109 55.000 15.93 0.00 0.00 2.92
3905 4051 0.388520 CAGTTCCACGCGACTCATCA 60.389 55.000 15.93 0.00 0.00 3.07
3906 4052 0.109086 AGTTCCACGCGACTCATCAG 60.109 55.000 15.93 0.00 0.00 2.90
3907 4053 1.078759 GTTCCACGCGACTCATCAGG 61.079 60.000 15.93 1.09 0.00 3.86
3908 4054 2.835701 TTCCACGCGACTCATCAGGC 62.836 60.000 15.93 0.00 0.00 4.85
3909 4055 2.125952 CACGCGACTCATCAGGCA 60.126 61.111 15.93 0.00 0.00 4.75
3910 4056 1.520120 CACGCGACTCATCAGGCAT 60.520 57.895 15.93 0.00 0.00 4.40
3911 4057 1.227089 ACGCGACTCATCAGGCATC 60.227 57.895 15.93 0.00 0.00 3.91
3912 4058 2.298629 CGCGACTCATCAGGCATCG 61.299 63.158 0.00 0.00 35.91 3.84
3913 4059 3.622756 CGACTCATCAGGCATCGC 58.377 61.111 0.00 0.00 0.00 4.58
3914 4060 1.227060 CGACTCATCAGGCATCGCA 60.227 57.895 0.00 0.00 0.00 5.10
3915 4061 1.213733 CGACTCATCAGGCATCGCAG 61.214 60.000 0.00 0.00 0.00 5.18
3916 4062 0.879400 GACTCATCAGGCATCGCAGG 60.879 60.000 0.00 0.00 0.00 4.85
3917 4063 1.597302 CTCATCAGGCATCGCAGGG 60.597 63.158 0.00 0.00 0.00 4.45
3918 4064 3.285215 CATCAGGCATCGCAGGGC 61.285 66.667 0.00 0.00 0.00 5.19
3919 4065 3.486685 ATCAGGCATCGCAGGGCT 61.487 61.111 0.00 0.00 42.53 5.19
3920 4066 3.472943 ATCAGGCATCGCAGGGCTC 62.473 63.158 0.00 0.00 39.39 4.70
3921 4067 4.478371 CAGGCATCGCAGGGCTCA 62.478 66.667 0.00 0.00 39.39 4.26
3922 4068 3.486685 AGGCATCGCAGGGCTCAT 61.487 61.111 0.00 0.00 36.23 2.90
3923 4069 2.976903 GGCATCGCAGGGCTCATC 60.977 66.667 0.00 0.00 0.00 2.92
3924 4070 2.976903 GCATCGCAGGGCTCATCC 60.977 66.667 0.00 0.00 0.00 3.51
3925 4071 2.664185 CATCGCAGGGCTCATCCG 60.664 66.667 0.00 0.00 34.94 4.18
3926 4072 4.615815 ATCGCAGGGCTCATCCGC 62.616 66.667 0.00 0.00 34.94 5.54
3935 4081 3.792736 CTCATCCGCCGGGGGAAA 61.793 66.667 40.23 29.32 40.09 3.13
3936 4082 3.093835 TCATCCGCCGGGGGAAAT 61.094 61.111 40.23 24.83 40.09 2.17
3937 4083 2.594592 CATCCGCCGGGGGAAATC 60.595 66.667 40.23 3.29 40.09 2.17
3938 4084 2.772622 ATCCGCCGGGGGAAATCT 60.773 61.111 40.23 23.70 40.09 2.40
3939 4085 2.819284 ATCCGCCGGGGGAAATCTC 61.819 63.158 40.23 1.62 40.09 2.75
3940 4086 4.910585 CCGCCGGGGGAAATCTCG 62.911 72.222 33.13 8.65 0.00 4.04
3941 4087 4.910585 CGCCGGGGGAAATCTCGG 62.911 72.222 11.42 0.00 44.70 4.63
3942 4088 4.564110 GCCGGGGGAAATCTCGGG 62.564 72.222 2.18 0.00 42.43 5.14
3943 4089 2.766651 CCGGGGGAAATCTCGGGA 60.767 66.667 0.00 0.00 38.93 5.14
3944 4090 2.808206 CCGGGGGAAATCTCGGGAG 61.808 68.421 0.00 0.00 38.93 4.30
3945 4091 2.808206 CGGGGGAAATCTCGGGAGG 61.808 68.421 0.00 0.00 0.00 4.30
3946 4092 2.452937 GGGGGAAATCTCGGGAGGG 61.453 68.421 0.00 0.00 0.00 4.30
3947 4093 2.452937 GGGGAAATCTCGGGAGGGG 61.453 68.421 0.00 0.00 0.00 4.79
3948 4094 1.384082 GGGAAATCTCGGGAGGGGA 60.384 63.158 0.00 0.00 0.00 4.81
3949 4095 0.986550 GGGAAATCTCGGGAGGGGAA 60.987 60.000 0.00 0.00 0.00 3.97
3950 4096 1.141185 GGAAATCTCGGGAGGGGAAT 58.859 55.000 0.00 0.00 0.00 3.01
3951 4097 1.202818 GGAAATCTCGGGAGGGGAATG 60.203 57.143 0.00 0.00 0.00 2.67
3952 4098 0.846693 AAATCTCGGGAGGGGAATGG 59.153 55.000 0.00 0.00 0.00 3.16
3953 4099 1.062488 AATCTCGGGAGGGGAATGGG 61.062 60.000 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 2.266055 GCCTCCACCACCTTCTCG 59.734 66.667 0.00 0.00 0.00 4.04
56 57 2.574399 GACGTCTCAGCCTCCACC 59.426 66.667 8.70 0.00 0.00 4.61
202 203 1.065854 ACTAGCTAGCAACAGCCTTGG 60.066 52.381 20.91 0.00 42.84 3.61
204 205 1.065854 CCACTAGCTAGCAACAGCCTT 60.066 52.381 20.91 0.00 42.84 4.35
354 391 0.899720 ACCGCAAATCCGTTCTAGGA 59.100 50.000 0.00 0.00 45.54 2.94
359 396 1.005347 CGTGATACCGCAAATCCGTTC 60.005 52.381 0.00 0.00 0.00 3.95
363 400 1.859080 GTCTCGTGATACCGCAAATCC 59.141 52.381 0.00 0.00 0.00 3.01
389 426 1.067635 GGTTTGCGGCATCAATTCTGT 60.068 47.619 2.28 0.00 0.00 3.41
391 428 1.203052 CAGGTTTGCGGCATCAATTCT 59.797 47.619 2.28 0.00 0.00 2.40
395 432 0.878416 GTACAGGTTTGCGGCATCAA 59.122 50.000 2.28 0.00 0.00 2.57
396 433 0.036164 AGTACAGGTTTGCGGCATCA 59.964 50.000 2.28 0.00 0.00 3.07
467 504 9.046296 CCTATCTAACTAAAACAGATTTGCGAT 57.954 33.333 0.00 0.00 31.60 4.58
468 505 7.011109 GCCTATCTAACTAAAACAGATTTGCGA 59.989 37.037 0.00 0.00 31.60 5.10
469 506 7.126398 GCCTATCTAACTAAAACAGATTTGCG 58.874 38.462 0.00 0.00 31.60 4.85
470 507 7.985476 TGCCTATCTAACTAAAACAGATTTGC 58.015 34.615 0.00 0.00 31.60 3.68
573 649 9.748708 TTGCAATTAAGAGGATTATTGTATTGC 57.251 29.630 0.00 0.00 43.24 3.56
708 785 1.737793 GTTCCTGCCAGGTTTATGTCG 59.262 52.381 11.27 0.00 36.53 4.35
868 968 1.330655 TTCGTGATCCAGCCCTCCTC 61.331 60.000 0.00 0.00 0.00 3.71
869 969 1.306141 TTCGTGATCCAGCCCTCCT 60.306 57.895 0.00 0.00 0.00 3.69
870 970 1.153349 GTTCGTGATCCAGCCCTCC 60.153 63.158 0.00 0.00 0.00 4.30
901 1001 1.531748 GGATCGATTTGGGCCCTGA 59.468 57.895 25.70 12.16 0.00 3.86
1255 1355 1.001706 GGGTTGAAGCCGTTTGAAGTC 60.002 52.381 0.00 0.00 0.00 3.01
1317 1417 3.636764 AGAACGCCCAAGAAACAAGAAAT 59.363 39.130 0.00 0.00 0.00 2.17
1331 1432 0.878961 AAGTCAACGACAGAACGCCC 60.879 55.000 0.00 0.00 34.60 6.13
1360 1461 2.584791 GCACAGTAATTTGCAGGAACG 58.415 47.619 0.00 0.00 38.68 3.95
1518 1633 5.570320 TCCGTAGATCCATACTCATCATCA 58.430 41.667 0.00 0.00 0.00 3.07
1539 1654 0.761802 GACCATGGTCCTCCTCATCC 59.238 60.000 31.37 5.37 39.08 3.51
1558 1673 7.973944 CCCTGAAAATAATAAAGAAAGGAACGG 59.026 37.037 0.00 0.00 0.00 4.44
1559 1674 7.973944 CCCCTGAAAATAATAAAGAAAGGAACG 59.026 37.037 0.00 0.00 0.00 3.95
1586 1701 8.463930 TCAGAAAACCACACAAGAGAATAATT 57.536 30.769 0.00 0.00 0.00 1.40
1598 1714 5.102313 CCTTGAAACTTCAGAAAACCACAC 58.898 41.667 0.00 0.00 38.61 3.82
1697 1815 1.873591 GCAATACCAATACCTGAGGCG 59.126 52.381 0.00 0.00 0.00 5.52
1750 1874 9.533253 AATGTGTTTCCTCTTCTGTAAAATTTG 57.467 29.630 0.00 0.00 0.00 2.32
1791 1915 9.941664 ATGATCTAGTTAATCATTTTCTTTGCG 57.058 29.630 0.00 0.00 40.16 4.85
1853 1977 7.336931 AGAGGCACACGACTTCAATAAATAAAT 59.663 33.333 0.00 0.00 0.00 1.40
1857 1981 4.579869 AGAGGCACACGACTTCAATAAAT 58.420 39.130 0.00 0.00 0.00 1.40
1861 1985 3.678056 TTAGAGGCACACGACTTCAAT 57.322 42.857 0.00 0.00 0.00 2.57
1870 1994 4.644103 ATCAAATGCATTAGAGGCACAC 57.356 40.909 13.39 0.00 45.23 3.82
1893 2017 6.150976 CCATGCATAACTTAGGTTCTTGTTCA 59.849 38.462 0.00 0.00 36.92 3.18
1905 2031 8.954834 ATAATTCAATCCCCATGCATAACTTA 57.045 30.769 0.00 0.00 0.00 2.24
1946 2074 7.496920 TCTTCAATAGTGAGGCAATCTAACATG 59.503 37.037 0.00 0.00 34.49 3.21
1947 2075 7.568349 TCTTCAATAGTGAGGCAATCTAACAT 58.432 34.615 0.00 0.00 34.49 2.71
1958 2090 6.825213 TCAAACCATGATCTTCAATAGTGAGG 59.175 38.462 0.00 0.00 31.40 3.86
1970 2102 6.839124 TGCTTTACATTCAAACCATGATCT 57.161 33.333 0.00 0.00 38.03 2.75
1971 2103 9.023967 GTAATGCTTTACATTCAAACCATGATC 57.976 33.333 15.56 0.00 46.28 2.92
2337 2477 4.774124 TGTCTCAAAAGCTAGCAGCATAT 58.226 39.130 18.83 0.00 45.56 1.78
2507 2649 2.981859 TGAAAGATCTTACCGCCCTC 57.018 50.000 8.75 1.17 0.00 4.30
2722 2865 5.074746 ACAGTCCAGGGGTAAAAATCTTT 57.925 39.130 0.00 0.00 0.00 2.52
2739 2882 3.674997 TCCAGATTTGCCTGTAACAGTC 58.325 45.455 0.00 0.00 32.43 3.51
3138 3284 3.565482 ACTGCATTGAAGTACACAACCAG 59.435 43.478 20.26 20.26 36.70 4.00
3155 3301 2.268762 TCATTTACCACTGCACTGCA 57.731 45.000 3.11 3.11 36.92 4.41
3180 3326 2.413142 CCGGACGGAGGGAGTACAC 61.413 68.421 4.40 0.00 37.50 2.90
3181 3327 2.044650 CCGGACGGAGGGAGTACA 60.045 66.667 4.40 0.00 37.50 2.90
3188 3334 0.672342 CTTATACACCCGGACGGAGG 59.328 60.000 13.13 6.21 37.50 4.30
3189 3335 1.336125 GACTTATACACCCGGACGGAG 59.664 57.143 13.13 6.96 37.50 4.63
3190 3336 1.340893 TGACTTATACACCCGGACGGA 60.341 52.381 13.13 0.00 37.50 4.69
3191 3337 1.105457 TGACTTATACACCCGGACGG 58.895 55.000 0.73 3.25 37.81 4.79
3192 3338 3.378339 GAATGACTTATACACCCGGACG 58.622 50.000 0.73 0.00 0.00 4.79
3193 3339 3.378339 CGAATGACTTATACACCCGGAC 58.622 50.000 0.73 0.00 0.00 4.79
3194 3340 2.223876 GCGAATGACTTATACACCCGGA 60.224 50.000 0.73 0.00 0.00 5.14
3195 3341 2.132762 GCGAATGACTTATACACCCGG 58.867 52.381 0.00 0.00 0.00 5.73
3196 3342 1.784856 CGCGAATGACTTATACACCCG 59.215 52.381 0.00 0.00 0.00 5.28
3197 3343 2.817901 ACGCGAATGACTTATACACCC 58.182 47.619 15.93 0.00 0.00 4.61
3198 3344 4.604976 ACTACGCGAATGACTTATACACC 58.395 43.478 15.93 0.00 0.00 4.16
3199 3345 5.970023 AGAACTACGCGAATGACTTATACAC 59.030 40.000 15.93 0.00 0.00 2.90
3200 3346 6.127810 AGAACTACGCGAATGACTTATACA 57.872 37.500 15.93 0.00 0.00 2.29
3201 3347 6.796072 CCTAGAACTACGCGAATGACTTATAC 59.204 42.308 15.93 0.00 0.00 1.47
3202 3348 6.484643 ACCTAGAACTACGCGAATGACTTATA 59.515 38.462 15.93 0.00 0.00 0.98
3203 3349 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
3204 3350 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
3205 3351 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
3206 3352 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
3207 3353 3.181503 TGACCTAGAACTACGCGAATGAC 60.182 47.826 15.93 0.66 0.00 3.06
3208 3354 3.011818 TGACCTAGAACTACGCGAATGA 58.988 45.455 15.93 0.00 0.00 2.57
3209 3355 3.416119 TGACCTAGAACTACGCGAATG 57.584 47.619 15.93 4.47 0.00 2.67
3210 3356 3.303857 CGATGACCTAGAACTACGCGAAT 60.304 47.826 15.93 0.00 0.00 3.34
3211 3357 2.031314 CGATGACCTAGAACTACGCGAA 59.969 50.000 15.93 0.00 0.00 4.70
3212 3358 1.596260 CGATGACCTAGAACTACGCGA 59.404 52.381 15.93 0.00 0.00 5.87
3213 3359 1.596260 TCGATGACCTAGAACTACGCG 59.404 52.381 3.53 3.53 0.00 6.01
3214 3360 3.900388 ATCGATGACCTAGAACTACGC 57.100 47.619 0.00 0.00 0.00 4.42
3215 3361 5.817988 TCAAATCGATGACCTAGAACTACG 58.182 41.667 0.00 0.00 0.00 3.51
3216 3362 6.039493 TCCTCAAATCGATGACCTAGAACTAC 59.961 42.308 0.00 0.00 0.00 2.73
3217 3363 6.127101 TCCTCAAATCGATGACCTAGAACTA 58.873 40.000 0.00 0.00 0.00 2.24
3218 3364 4.956700 TCCTCAAATCGATGACCTAGAACT 59.043 41.667 0.00 0.00 0.00 3.01
3219 3365 5.263968 TCCTCAAATCGATGACCTAGAAC 57.736 43.478 0.00 0.00 0.00 3.01
3220 3366 5.932619 TTCCTCAAATCGATGACCTAGAA 57.067 39.130 0.00 0.00 0.00 2.10
3221 3367 6.485830 AATTCCTCAAATCGATGACCTAGA 57.514 37.500 0.00 0.00 0.00 2.43
3222 3368 8.662781 TTTAATTCCTCAAATCGATGACCTAG 57.337 34.615 0.00 0.00 0.00 3.02
3224 3370 9.799106 ATATTTAATTCCTCAAATCGATGACCT 57.201 29.630 0.00 0.00 0.00 3.85
3225 3371 9.831737 CATATTTAATTCCTCAAATCGATGACC 57.168 33.333 0.00 0.00 0.00 4.02
3261 3407 9.832445 GGAAATCTAGTGGTATACTTTTCATGA 57.168 33.333 2.25 0.00 40.89 3.07
3262 3408 9.613428 TGGAAATCTAGTGGTATACTTTTCATG 57.387 33.333 2.25 0.00 40.89 3.07
3263 3409 9.614792 GTGGAAATCTAGTGGTATACTTTTCAT 57.385 33.333 2.25 0.00 40.89 2.57
3264 3410 8.598916 TGTGGAAATCTAGTGGTATACTTTTCA 58.401 33.333 2.25 0.00 40.89 2.69
3265 3411 8.880750 GTGTGGAAATCTAGTGGTATACTTTTC 58.119 37.037 2.25 0.00 40.89 2.29
3266 3412 7.548075 CGTGTGGAAATCTAGTGGTATACTTTT 59.452 37.037 2.25 0.00 40.89 2.27
3267 3413 7.039882 CGTGTGGAAATCTAGTGGTATACTTT 58.960 38.462 2.25 0.00 40.89 2.66
3268 3414 6.406624 CCGTGTGGAAATCTAGTGGTATACTT 60.407 42.308 2.25 0.00 37.99 2.24
3269 3415 5.068723 CCGTGTGGAAATCTAGTGGTATACT 59.931 44.000 2.25 0.00 39.66 2.12
3270 3416 5.068198 TCCGTGTGGAAATCTAGTGGTATAC 59.932 44.000 0.00 0.00 42.85 1.47
3271 3417 5.202765 TCCGTGTGGAAATCTAGTGGTATA 58.797 41.667 0.00 0.00 42.85 1.47
3272 3418 4.028131 TCCGTGTGGAAATCTAGTGGTAT 58.972 43.478 0.00 0.00 42.85 2.73
3273 3419 3.433343 TCCGTGTGGAAATCTAGTGGTA 58.567 45.455 0.00 0.00 42.85 3.25
3274 3420 2.253610 TCCGTGTGGAAATCTAGTGGT 58.746 47.619 0.00 0.00 42.85 4.16
3286 3432 5.873179 ATTTACAAACTACATCCGTGTGG 57.127 39.130 0.00 0.00 42.04 4.17
3344 3490 7.859875 GCGTAGTTCTAGGTCGATAATTTAACT 59.140 37.037 0.00 0.00 0.00 2.24
3345 3491 7.149224 CGCGTAGTTCTAGGTCGATAATTTAAC 60.149 40.741 0.00 0.00 0.00 2.01
3346 3492 6.852853 CGCGTAGTTCTAGGTCGATAATTTAA 59.147 38.462 0.00 0.00 0.00 1.52
3347 3493 6.202762 TCGCGTAGTTCTAGGTCGATAATTTA 59.797 38.462 5.77 0.00 0.00 1.40
3348 3494 5.008019 TCGCGTAGTTCTAGGTCGATAATTT 59.992 40.000 5.77 0.00 0.00 1.82
3349 3495 4.512944 TCGCGTAGTTCTAGGTCGATAATT 59.487 41.667 5.77 0.00 0.00 1.40
3350 3496 4.060900 TCGCGTAGTTCTAGGTCGATAAT 58.939 43.478 5.77 0.00 0.00 1.28
3351 3497 3.457234 TCGCGTAGTTCTAGGTCGATAA 58.543 45.455 5.77 0.00 0.00 1.75
3352 3498 3.097877 TCGCGTAGTTCTAGGTCGATA 57.902 47.619 5.77 0.00 0.00 2.92
3353 3499 1.945387 TCGCGTAGTTCTAGGTCGAT 58.055 50.000 5.77 0.00 0.00 3.59
3354 3500 1.725641 TTCGCGTAGTTCTAGGTCGA 58.274 50.000 5.77 11.56 0.00 4.20
3355 3501 2.031314 TCATTCGCGTAGTTCTAGGTCG 59.969 50.000 5.77 5.99 0.00 4.79
3356 3502 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
3357 3503 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
3358 3504 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
3359 3505 7.320797 GTGTATAAGTCATTCGCGTAGTTCTAG 59.679 40.741 5.77 0.00 0.00 2.43
3360 3506 7.128331 GTGTATAAGTCATTCGCGTAGTTCTA 58.872 38.462 5.77 0.00 0.00 2.10
3361 3507 5.970023 GTGTATAAGTCATTCGCGTAGTTCT 59.030 40.000 5.77 0.00 0.00 3.01
3362 3508 5.172771 GGTGTATAAGTCATTCGCGTAGTTC 59.827 44.000 5.77 0.00 0.00 3.01
3363 3509 5.039333 GGTGTATAAGTCATTCGCGTAGTT 58.961 41.667 5.77 2.59 0.00 2.24
3364 3510 4.604976 GGTGTATAAGTCATTCGCGTAGT 58.395 43.478 5.77 0.00 0.00 2.73
3365 3511 3.662645 CGGTGTATAAGTCATTCGCGTAG 59.337 47.826 5.77 0.00 0.00 3.51
3366 3512 3.548616 CCGGTGTATAAGTCATTCGCGTA 60.549 47.826 5.77 0.00 0.00 4.42
3367 3513 2.456989 CGGTGTATAAGTCATTCGCGT 58.543 47.619 5.77 0.00 0.00 6.01
3368 3514 1.784856 CCGGTGTATAAGTCATTCGCG 59.215 52.381 0.00 0.00 0.00 5.87
3369 3515 2.132762 CCCGGTGTATAAGTCATTCGC 58.867 52.381 0.00 0.00 0.00 4.70
3370 3516 3.378339 GTCCCGGTGTATAAGTCATTCG 58.622 50.000 0.00 0.00 0.00 3.34
3371 3517 3.378339 CGTCCCGGTGTATAAGTCATTC 58.622 50.000 0.00 0.00 0.00 2.67
3372 3518 2.101917 CCGTCCCGGTGTATAAGTCATT 59.898 50.000 0.00 0.00 42.73 2.57
3373 3519 1.684983 CCGTCCCGGTGTATAAGTCAT 59.315 52.381 0.00 0.00 42.73 3.06
3374 3520 1.105457 CCGTCCCGGTGTATAAGTCA 58.895 55.000 0.00 0.00 42.73 3.41
3375 3521 3.953201 CCGTCCCGGTGTATAAGTC 57.047 57.895 0.00 0.00 42.73 3.01
3386 3532 1.467920 AAAGTACTACCTCCGTCCCG 58.532 55.000 0.00 0.00 0.00 5.14
3387 3533 5.354767 CAAATAAAGTACTACCTCCGTCCC 58.645 45.833 0.00 0.00 0.00 4.46
3388 3534 5.354767 CCAAATAAAGTACTACCTCCGTCC 58.645 45.833 0.00 0.00 0.00 4.79
3389 3535 4.807834 GCCAAATAAAGTACTACCTCCGTC 59.192 45.833 0.00 0.00 0.00 4.79
3390 3536 4.223477 TGCCAAATAAAGTACTACCTCCGT 59.777 41.667 0.00 0.00 0.00 4.69
3391 3537 4.569564 GTGCCAAATAAAGTACTACCTCCG 59.430 45.833 0.00 0.00 0.00 4.63
3392 3538 5.742063 AGTGCCAAATAAAGTACTACCTCC 58.258 41.667 0.00 0.00 0.00 4.30
3393 3539 8.255905 TCTTAGTGCCAAATAAAGTACTACCTC 58.744 37.037 0.00 0.00 31.99 3.85
3394 3540 8.142485 TCTTAGTGCCAAATAAAGTACTACCT 57.858 34.615 0.00 0.00 31.99 3.08
3395 3541 8.959705 ATCTTAGTGCCAAATAAAGTACTACC 57.040 34.615 0.00 0.00 31.99 3.18
3398 3544 9.686683 ATCAATCTTAGTGCCAAATAAAGTACT 57.313 29.630 0.00 0.00 33.31 2.73
3437 3583 0.835276 TCCTGCATCATGAGACCCAG 59.165 55.000 0.09 4.82 0.00 4.45
3441 3587 5.049543 GCTAGAATTTCCTGCATCATGAGAC 60.050 44.000 0.09 0.00 0.00 3.36
3464 3610 1.897560 AACACCCTCTTACTTGCAGC 58.102 50.000 0.00 0.00 0.00 5.25
3473 3619 2.666317 CCTGGAAACAAACACCCTCTT 58.334 47.619 0.00 0.00 42.06 2.85
3474 3620 1.133482 CCCTGGAAACAAACACCCTCT 60.133 52.381 0.00 0.00 42.06 3.69
3475 3621 1.133606 TCCCTGGAAACAAACACCCTC 60.134 52.381 0.00 0.00 42.06 4.30
3476 3622 0.930726 TCCCTGGAAACAAACACCCT 59.069 50.000 0.00 0.00 42.06 4.34
3477 3623 1.037493 GTCCCTGGAAACAAACACCC 58.963 55.000 0.00 0.00 42.06 4.61
3478 3624 2.067365 AGTCCCTGGAAACAAACACC 57.933 50.000 0.00 0.00 42.06 4.16
3479 3625 4.022329 CCATAAGTCCCTGGAAACAAACAC 60.022 45.833 0.00 0.00 42.06 3.32
3480 3626 4.148838 CCATAAGTCCCTGGAAACAAACA 58.851 43.478 0.00 0.00 42.06 2.83
3481 3627 3.509967 CCCATAAGTCCCTGGAAACAAAC 59.490 47.826 0.00 0.00 42.06 2.93
3482 3628 3.141272 ACCCATAAGTCCCTGGAAACAAA 59.859 43.478 0.00 0.00 42.06 2.83
3483 3629 2.719705 ACCCATAAGTCCCTGGAAACAA 59.280 45.455 0.00 0.00 42.06 2.83
3484 3630 2.307686 GACCCATAAGTCCCTGGAAACA 59.692 50.000 0.00 0.00 34.24 2.83
3485 3631 2.576648 AGACCCATAAGTCCCTGGAAAC 59.423 50.000 0.00 0.00 37.49 2.78
3486 3632 2.929301 AGACCCATAAGTCCCTGGAAA 58.071 47.619 0.00 0.00 37.49 3.13
3487 3633 2.661176 AGACCCATAAGTCCCTGGAA 57.339 50.000 0.00 0.00 37.49 3.53
3488 3634 2.090719 CCTAGACCCATAAGTCCCTGGA 60.091 54.545 0.00 0.00 37.49 3.86
3489 3635 2.330216 CCTAGACCCATAAGTCCCTGG 58.670 57.143 0.00 0.00 37.49 4.45
3490 3636 2.090719 TCCCTAGACCCATAAGTCCCTG 60.091 54.545 0.00 0.00 37.49 4.45
3491 3637 2.090663 GTCCCTAGACCCATAAGTCCCT 60.091 54.545 0.00 0.00 37.49 4.20
3492 3638 2.090663 AGTCCCTAGACCCATAAGTCCC 60.091 54.545 0.00 0.00 44.72 4.46
3493 3639 3.331718 AGTCCCTAGACCCATAAGTCC 57.668 52.381 0.00 0.00 44.72 3.85
3494 3640 6.803366 TTTAAGTCCCTAGACCCATAAGTC 57.197 41.667 0.00 0.00 44.72 3.01
3495 3641 8.865244 TTATTTAAGTCCCTAGACCCATAAGT 57.135 34.615 0.00 0.00 44.72 2.24
3496 3642 8.935741 ACTTATTTAAGTCCCTAGACCCATAAG 58.064 37.037 0.00 0.00 42.52 1.73
3497 3643 8.865244 ACTTATTTAAGTCCCTAGACCCATAA 57.135 34.615 0.00 0.00 42.52 1.90
3512 3658 7.284716 GGTGGGACTTATTGGGACTTATTTAAG 59.715 40.741 0.00 0.00 39.18 1.85
3513 3659 7.036425 AGGTGGGACTTATTGGGACTTATTTAA 60.036 37.037 0.00 0.00 0.00 1.52
3514 3660 6.449041 AGGTGGGACTTATTGGGACTTATTTA 59.551 38.462 0.00 0.00 0.00 1.40
3515 3661 5.255443 AGGTGGGACTTATTGGGACTTATTT 59.745 40.000 0.00 0.00 0.00 1.40
3516 3662 4.794067 AGGTGGGACTTATTGGGACTTATT 59.206 41.667 0.00 0.00 0.00 1.40
3517 3663 4.380791 AGGTGGGACTTATTGGGACTTAT 58.619 43.478 0.00 0.00 0.00 1.73
3518 3664 3.810623 AGGTGGGACTTATTGGGACTTA 58.189 45.455 0.00 0.00 0.00 2.24
3519 3665 2.644151 AGGTGGGACTTATTGGGACTT 58.356 47.619 0.00 0.00 0.00 3.01
3520 3666 2.361085 AGGTGGGACTTATTGGGACT 57.639 50.000 0.00 0.00 0.00 3.85
3521 3667 4.267536 GTTTAGGTGGGACTTATTGGGAC 58.732 47.826 0.00 0.00 0.00 4.46
3522 3668 3.267551 GGTTTAGGTGGGACTTATTGGGA 59.732 47.826 0.00 0.00 0.00 4.37
3523 3669 3.010808 TGGTTTAGGTGGGACTTATTGGG 59.989 47.826 0.00 0.00 0.00 4.12
3524 3670 4.310022 TGGTTTAGGTGGGACTTATTGG 57.690 45.455 0.00 0.00 0.00 3.16
3525 3671 5.335348 CGTTTGGTTTAGGTGGGACTTATTG 60.335 44.000 0.00 0.00 0.00 1.90
3526 3672 4.763279 CGTTTGGTTTAGGTGGGACTTATT 59.237 41.667 0.00 0.00 0.00 1.40
3527 3673 4.329392 CGTTTGGTTTAGGTGGGACTTAT 58.671 43.478 0.00 0.00 0.00 1.73
3528 3674 3.496515 CCGTTTGGTTTAGGTGGGACTTA 60.497 47.826 0.00 0.00 0.00 2.24
3529 3675 2.578786 CGTTTGGTTTAGGTGGGACTT 58.421 47.619 0.00 0.00 0.00 3.01
3530 3676 1.202842 CCGTTTGGTTTAGGTGGGACT 60.203 52.381 0.00 0.00 0.00 3.85
3531 3677 1.202794 TCCGTTTGGTTTAGGTGGGAC 60.203 52.381 0.00 0.00 36.30 4.46
3532 3678 1.138568 TCCGTTTGGTTTAGGTGGGA 58.861 50.000 0.00 0.00 36.30 4.37
3533 3679 1.883926 CTTCCGTTTGGTTTAGGTGGG 59.116 52.381 0.00 0.00 36.30 4.61
3534 3680 1.883926 CCTTCCGTTTGGTTTAGGTGG 59.116 52.381 0.00 0.00 36.30 4.61
3535 3681 1.883926 CCCTTCCGTTTGGTTTAGGTG 59.116 52.381 0.00 0.00 36.30 4.00
3536 3682 1.776063 TCCCTTCCGTTTGGTTTAGGT 59.224 47.619 0.00 0.00 36.30 3.08
3537 3683 2.156917 GTCCCTTCCGTTTGGTTTAGG 58.843 52.381 0.00 0.00 36.30 2.69
3538 3684 3.136009 AGTCCCTTCCGTTTGGTTTAG 57.864 47.619 0.00 0.00 36.30 1.85
3539 3685 3.581265 AAGTCCCTTCCGTTTGGTTTA 57.419 42.857 0.00 0.00 36.30 2.01
3540 3686 2.447408 AAGTCCCTTCCGTTTGGTTT 57.553 45.000 0.00 0.00 36.30 3.27
3541 3687 3.418047 CATAAGTCCCTTCCGTTTGGTT 58.582 45.455 0.00 0.00 36.30 3.67
3542 3688 2.290705 CCATAAGTCCCTTCCGTTTGGT 60.291 50.000 0.00 0.00 36.30 3.67
3543 3689 2.365582 CCATAAGTCCCTTCCGTTTGG 58.634 52.381 0.00 0.00 0.00 3.28
3544 3690 2.365582 CCCATAAGTCCCTTCCGTTTG 58.634 52.381 0.00 0.00 0.00 2.93
3545 3691 1.283905 CCCCATAAGTCCCTTCCGTTT 59.716 52.381 0.00 0.00 0.00 3.60
3546 3692 0.916809 CCCCATAAGTCCCTTCCGTT 59.083 55.000 0.00 0.00 0.00 4.44
3547 3693 0.043637 TCCCCATAAGTCCCTTCCGT 59.956 55.000 0.00 0.00 0.00 4.69
3548 3694 0.468648 GTCCCCATAAGTCCCTTCCG 59.531 60.000 0.00 0.00 0.00 4.30
3549 3695 1.894699 AGTCCCCATAAGTCCCTTCC 58.105 55.000 0.00 0.00 0.00 3.46
3550 3696 5.104067 ACAATAAGTCCCCATAAGTCCCTTC 60.104 44.000 0.00 0.00 0.00 3.46
3551 3697 4.794067 ACAATAAGTCCCCATAAGTCCCTT 59.206 41.667 0.00 0.00 0.00 3.95
3552 3698 4.166144 CACAATAAGTCCCCATAAGTCCCT 59.834 45.833 0.00 0.00 0.00 4.20
3553 3699 4.461198 CACAATAAGTCCCCATAAGTCCC 58.539 47.826 0.00 0.00 0.00 4.46
3554 3700 4.079958 ACCACAATAAGTCCCCATAAGTCC 60.080 45.833 0.00 0.00 0.00 3.85
3555 3701 4.881850 CACCACAATAAGTCCCCATAAGTC 59.118 45.833 0.00 0.00 0.00 3.01
3556 3702 4.538490 TCACCACAATAAGTCCCCATAAGT 59.462 41.667 0.00 0.00 0.00 2.24
3557 3703 5.110814 TCACCACAATAAGTCCCCATAAG 57.889 43.478 0.00 0.00 0.00 1.73
3558 3704 5.725551 ATCACCACAATAAGTCCCCATAA 57.274 39.130 0.00 0.00 0.00 1.90
3559 3705 5.725551 AATCACCACAATAAGTCCCCATA 57.274 39.130 0.00 0.00 0.00 2.74
3560 3706 4.608170 AATCACCACAATAAGTCCCCAT 57.392 40.909 0.00 0.00 0.00 4.00
3561 3707 4.085733 CAAATCACCACAATAAGTCCCCA 58.914 43.478 0.00 0.00 0.00 4.96
3562 3708 3.447229 CCAAATCACCACAATAAGTCCCC 59.553 47.826 0.00 0.00 0.00 4.81
3563 3709 3.447229 CCCAAATCACCACAATAAGTCCC 59.553 47.826 0.00 0.00 0.00 4.46
3564 3710 4.157840 GTCCCAAATCACCACAATAAGTCC 59.842 45.833 0.00 0.00 0.00 3.85
3565 3711 5.010282 AGTCCCAAATCACCACAATAAGTC 58.990 41.667 0.00 0.00 0.00 3.01
3566 3712 4.998051 AGTCCCAAATCACCACAATAAGT 58.002 39.130 0.00 0.00 0.00 2.24
3567 3713 5.982890 AAGTCCCAAATCACCACAATAAG 57.017 39.130 0.00 0.00 0.00 1.73
3568 3714 7.671819 TCAATAAGTCCCAAATCACCACAATAA 59.328 33.333 0.00 0.00 0.00 1.40
3569 3715 7.178573 TCAATAAGTCCCAAATCACCACAATA 58.821 34.615 0.00 0.00 0.00 1.90
3570 3716 6.015918 TCAATAAGTCCCAAATCACCACAAT 58.984 36.000 0.00 0.00 0.00 2.71
3571 3717 5.389520 TCAATAAGTCCCAAATCACCACAA 58.610 37.500 0.00 0.00 0.00 3.33
3572 3718 4.991776 TCAATAAGTCCCAAATCACCACA 58.008 39.130 0.00 0.00 0.00 4.17
3573 3719 5.975693 TTCAATAAGTCCCAAATCACCAC 57.024 39.130 0.00 0.00 0.00 4.16
3574 3720 6.985653 TTTTCAATAAGTCCCAAATCACCA 57.014 33.333 0.00 0.00 0.00 4.17
3575 3721 7.598869 GTCTTTTTCAATAAGTCCCAAATCACC 59.401 37.037 0.00 0.00 0.00 4.02
3576 3722 8.360390 AGTCTTTTTCAATAAGTCCCAAATCAC 58.640 33.333 0.00 0.00 0.00 3.06
3577 3723 8.477419 AGTCTTTTTCAATAAGTCCCAAATCA 57.523 30.769 0.00 0.00 0.00 2.57
3578 3724 8.797438 AGAGTCTTTTTCAATAAGTCCCAAATC 58.203 33.333 0.00 0.00 0.00 2.17
3579 3725 8.712228 AGAGTCTTTTTCAATAAGTCCCAAAT 57.288 30.769 0.00 0.00 0.00 2.32
3580 3726 7.230712 GGAGAGTCTTTTTCAATAAGTCCCAAA 59.769 37.037 0.00 0.00 0.00 3.28
3581 3727 6.715264 GGAGAGTCTTTTTCAATAAGTCCCAA 59.285 38.462 0.00 0.00 0.00 4.12
3582 3728 6.238648 GGAGAGTCTTTTTCAATAAGTCCCA 58.761 40.000 0.00 0.00 0.00 4.37
3583 3729 5.648526 GGGAGAGTCTTTTTCAATAAGTCCC 59.351 44.000 0.00 0.17 31.21 4.46
3584 3730 6.238648 TGGGAGAGTCTTTTTCAATAAGTCC 58.761 40.000 0.00 0.00 0.00 3.85
3585 3731 7.162082 TCTGGGAGAGTCTTTTTCAATAAGTC 58.838 38.462 0.00 0.00 0.00 3.01
3586 3732 7.079451 TCTGGGAGAGTCTTTTTCAATAAGT 57.921 36.000 0.00 0.00 0.00 2.24
3587 3733 6.597280 CCTCTGGGAGAGTCTTTTTCAATAAG 59.403 42.308 0.00 0.00 40.72 1.73
3588 3734 6.272324 TCCTCTGGGAGAGTCTTTTTCAATAA 59.728 38.462 0.00 0.00 40.72 1.40
3589 3735 5.785423 TCCTCTGGGAGAGTCTTTTTCAATA 59.215 40.000 0.00 0.00 40.72 1.90
3590 3736 4.599241 TCCTCTGGGAGAGTCTTTTTCAAT 59.401 41.667 0.00 0.00 40.72 2.57
3591 3737 3.973973 TCCTCTGGGAGAGTCTTTTTCAA 59.026 43.478 0.00 0.00 40.72 2.69
3592 3738 3.587498 TCCTCTGGGAGAGTCTTTTTCA 58.413 45.455 0.00 0.00 40.72 2.69
3605 3751 1.141858 GTCCCAATAAGCTCCTCTGGG 59.858 57.143 14.21 14.21 46.99 4.45
3606 3752 2.122768 AGTCCCAATAAGCTCCTCTGG 58.877 52.381 0.00 0.00 0.00 3.86
3607 3753 3.922171 AAGTCCCAATAAGCTCCTCTG 57.078 47.619 0.00 0.00 0.00 3.35
3608 3754 4.282195 CGATAAGTCCCAATAAGCTCCTCT 59.718 45.833 0.00 0.00 0.00 3.69
3609 3755 4.281182 TCGATAAGTCCCAATAAGCTCCTC 59.719 45.833 0.00 0.00 0.00 3.71
3610 3756 4.223953 TCGATAAGTCCCAATAAGCTCCT 58.776 43.478 0.00 0.00 0.00 3.69
3611 3757 4.602340 TCGATAAGTCCCAATAAGCTCC 57.398 45.455 0.00 0.00 0.00 4.70
3612 3758 4.859798 CGATCGATAAGTCCCAATAAGCTC 59.140 45.833 10.26 0.00 0.00 4.09
3613 3759 4.810790 CGATCGATAAGTCCCAATAAGCT 58.189 43.478 10.26 0.00 0.00 3.74
3614 3760 3.368236 GCGATCGATAAGTCCCAATAAGC 59.632 47.826 21.57 0.00 0.00 3.09
3615 3761 4.386049 GTGCGATCGATAAGTCCCAATAAG 59.614 45.833 21.57 0.00 0.00 1.73
3616 3762 4.304110 GTGCGATCGATAAGTCCCAATAA 58.696 43.478 21.57 0.00 0.00 1.40
3617 3763 3.305813 GGTGCGATCGATAAGTCCCAATA 60.306 47.826 21.57 0.00 0.00 1.90
3618 3764 2.548067 GGTGCGATCGATAAGTCCCAAT 60.548 50.000 21.57 0.00 0.00 3.16
3619 3765 1.202486 GGTGCGATCGATAAGTCCCAA 60.202 52.381 21.57 0.00 0.00 4.12
3620 3766 0.387929 GGTGCGATCGATAAGTCCCA 59.612 55.000 21.57 0.92 0.00 4.37
3621 3767 0.674534 AGGTGCGATCGATAAGTCCC 59.325 55.000 21.57 6.64 0.00 4.46
3622 3768 1.603172 CCAGGTGCGATCGATAAGTCC 60.603 57.143 21.57 10.45 0.00 3.85
3623 3769 1.603172 CCCAGGTGCGATCGATAAGTC 60.603 57.143 21.57 0.00 0.00 3.01
3624 3770 0.389391 CCCAGGTGCGATCGATAAGT 59.611 55.000 21.57 0.00 0.00 2.24
3625 3771 0.946221 GCCCAGGTGCGATCGATAAG 60.946 60.000 21.57 3.64 0.00 1.73
3626 3772 1.069090 GCCCAGGTGCGATCGATAA 59.931 57.895 21.57 0.00 0.00 1.75
3627 3773 2.734591 GCCCAGGTGCGATCGATA 59.265 61.111 21.57 3.49 0.00 2.92
3628 3774 4.241555 GGCCCAGGTGCGATCGAT 62.242 66.667 21.57 0.00 0.00 3.59
3692 3838 4.841617 ATGCGAGGCGGGAGGAGA 62.842 66.667 0.00 0.00 0.00 3.71
3693 3839 4.292178 GATGCGAGGCGGGAGGAG 62.292 72.222 0.00 0.00 0.00 3.69
3696 3842 3.905705 GATCGATGCGAGGCGGGAG 62.906 68.421 0.54 0.00 39.91 4.30
3697 3843 3.978491 GATCGATGCGAGGCGGGA 61.978 66.667 0.54 0.00 39.91 5.14
3698 3844 3.905705 GAGATCGATGCGAGGCGGG 62.906 68.421 0.54 0.00 39.91 6.13
3699 3845 2.429907 GAGATCGATGCGAGGCGG 60.430 66.667 0.54 0.00 39.91 6.13
3700 3846 2.413437 AAGGAGATCGATGCGAGGCG 62.413 60.000 0.54 0.00 39.91 5.52
3701 3847 0.665972 GAAGGAGATCGATGCGAGGC 60.666 60.000 0.54 0.00 39.91 4.70
3702 3848 0.038709 GGAAGGAGATCGATGCGAGG 60.039 60.000 0.54 0.00 39.91 4.63
3703 3849 0.038709 GGGAAGGAGATCGATGCGAG 60.039 60.000 0.54 0.00 39.91 5.03
3704 3850 1.464376 GGGGAAGGAGATCGATGCGA 61.464 60.000 0.54 0.00 41.13 5.10
3705 3851 1.005630 GGGGAAGGAGATCGATGCG 60.006 63.158 0.54 0.00 0.00 4.73
3706 3852 1.124477 AGGGGGAAGGAGATCGATGC 61.124 60.000 0.54 0.00 0.00 3.91
3707 3853 0.683973 CAGGGGGAAGGAGATCGATG 59.316 60.000 0.54 0.00 0.00 3.84
3708 3854 0.266152 ACAGGGGGAAGGAGATCGAT 59.734 55.000 0.00 0.00 0.00 3.59
3709 3855 0.397254 GACAGGGGGAAGGAGATCGA 60.397 60.000 0.00 0.00 0.00 3.59
3710 3856 1.403687 GGACAGGGGGAAGGAGATCG 61.404 65.000 0.00 0.00 0.00 3.69
3711 3857 1.057275 GGGACAGGGGGAAGGAGATC 61.057 65.000 0.00 0.00 0.00 2.75
3712 3858 1.004891 GGGACAGGGGGAAGGAGAT 59.995 63.158 0.00 0.00 0.00 2.75
3713 3859 2.454941 GGGACAGGGGGAAGGAGA 59.545 66.667 0.00 0.00 0.00 3.71
3714 3860 3.083997 CGGGACAGGGGGAAGGAG 61.084 72.222 0.00 0.00 0.00 3.69
3717 3863 4.410400 GTGCGGGACAGGGGGAAG 62.410 72.222 0.00 0.00 0.00 3.46
3721 3867 4.410400 GAAGGTGCGGGACAGGGG 62.410 72.222 1.14 0.00 0.00 4.79
3722 3868 3.316573 GAGAAGGTGCGGGACAGGG 62.317 68.421 1.14 0.00 0.00 4.45
3723 3869 2.266055 GAGAAGGTGCGGGACAGG 59.734 66.667 1.14 0.00 0.00 4.00
3724 3870 2.266055 GGAGAAGGTGCGGGACAG 59.734 66.667 1.14 0.00 0.00 3.51
3725 3871 3.691342 CGGAGAAGGTGCGGGACA 61.691 66.667 1.14 0.00 36.11 4.02
3728 3874 4.821589 GAGCGGAGAAGGTGCGGG 62.822 72.222 0.00 0.00 41.06 6.13
3729 3875 4.821589 GGAGCGGAGAAGGTGCGG 62.822 72.222 0.00 0.00 41.06 5.69
3730 3876 3.302347 AAGGAGCGGAGAAGGTGCG 62.302 63.158 0.00 0.00 44.19 5.34
3731 3877 1.448717 GAAGGAGCGGAGAAGGTGC 60.449 63.158 0.00 0.00 0.00 5.01
3732 3878 1.219393 GGAAGGAGCGGAGAAGGTG 59.781 63.158 0.00 0.00 0.00 4.00
3733 3879 1.990614 GGGAAGGAGCGGAGAAGGT 60.991 63.158 0.00 0.00 0.00 3.50
3734 3880 2.736826 GGGGAAGGAGCGGAGAAGG 61.737 68.421 0.00 0.00 0.00 3.46
3735 3881 1.268283 AAGGGGAAGGAGCGGAGAAG 61.268 60.000 0.00 0.00 0.00 2.85
3736 3882 1.229529 AAGGGGAAGGAGCGGAGAA 60.230 57.895 0.00 0.00 0.00 2.87
3737 3883 1.686110 GAAGGGGAAGGAGCGGAGA 60.686 63.158 0.00 0.00 0.00 3.71
3738 3884 1.687493 AGAAGGGGAAGGAGCGGAG 60.687 63.158 0.00 0.00 0.00 4.63
3739 3885 1.990060 CAGAAGGGGAAGGAGCGGA 60.990 63.158 0.00 0.00 0.00 5.54
3740 3886 2.586792 CAGAAGGGGAAGGAGCGG 59.413 66.667 0.00 0.00 0.00 5.52
3741 3887 2.124942 GCAGAAGGGGAAGGAGCG 60.125 66.667 0.00 0.00 0.00 5.03
3742 3888 2.124942 CGCAGAAGGGGAAGGAGC 60.125 66.667 0.00 0.00 0.00 4.70
3743 3889 2.124942 GCGCAGAAGGGGAAGGAG 60.125 66.667 0.30 0.00 0.00 3.69
3744 3890 3.717294 GGCGCAGAAGGGGAAGGA 61.717 66.667 10.83 0.00 0.00 3.36
3745 3891 4.803908 GGGCGCAGAAGGGGAAGG 62.804 72.222 10.83 0.00 0.00 3.46
3767 3913 2.511373 TACTGGCGGCGCATCTTG 60.511 61.111 34.36 18.99 0.00 3.02
3768 3914 2.202932 CTACTGGCGGCGCATCTT 60.203 61.111 34.36 16.47 0.00 2.40
3769 3915 4.899239 GCTACTGGCGGCGCATCT 62.899 66.667 34.36 16.54 0.00 2.90
3845 3991 4.838152 CCTCACCGTCGGCCATGG 62.838 72.222 12.28 7.63 37.17 3.66
3846 3992 3.723235 CTCCTCACCGTCGGCCATG 62.723 68.421 12.28 2.14 0.00 3.66
3847 3993 3.461773 CTCCTCACCGTCGGCCAT 61.462 66.667 12.28 0.00 0.00 4.40
3850 3996 4.131088 GTCCTCCTCACCGTCGGC 62.131 72.222 12.28 0.00 0.00 5.54
3851 3997 3.812019 CGTCCTCCTCACCGTCGG 61.812 72.222 10.48 10.48 0.00 4.79
3852 3998 3.812019 CCGTCCTCCTCACCGTCG 61.812 72.222 0.00 0.00 0.00 5.12
3853 3999 3.450115 CCCGTCCTCCTCACCGTC 61.450 72.222 0.00 0.00 0.00 4.79
3854 4000 3.518552 TTCCCGTCCTCCTCACCGT 62.519 63.158 0.00 0.00 0.00 4.83
3855 4001 2.678934 TTCCCGTCCTCCTCACCG 60.679 66.667 0.00 0.00 0.00 4.94
3856 4002 2.657066 GGTTCCCGTCCTCCTCACC 61.657 68.421 0.00 0.00 0.00 4.02
3857 4003 2.657066 GGGTTCCCGTCCTCCTCAC 61.657 68.421 0.00 0.00 0.00 3.51
3858 4004 2.284405 GGGTTCCCGTCCTCCTCA 60.284 66.667 0.00 0.00 0.00 3.86
3859 4005 1.199425 AAAGGGTTCCCGTCCTCCTC 61.199 60.000 1.91 0.00 32.02 3.71
3860 4006 1.151877 AAAGGGTTCCCGTCCTCCT 60.152 57.895 1.91 0.00 32.02 3.69
3861 4007 1.199425 AGAAAGGGTTCCCGTCCTCC 61.199 60.000 1.91 0.00 33.92 4.30
3862 4008 0.691332 AAGAAAGGGTTCCCGTCCTC 59.309 55.000 1.91 0.00 33.92 3.71
3863 4009 0.400594 CAAGAAAGGGTTCCCGTCCT 59.599 55.000 1.91 0.00 33.92 3.85
3864 4010 0.109913 ACAAGAAAGGGTTCCCGTCC 59.890 55.000 1.91 0.00 33.92 4.79
3865 4011 1.071857 AGACAAGAAAGGGTTCCCGTC 59.928 52.381 1.91 4.61 36.42 4.79
3866 4012 1.071857 GAGACAAGAAAGGGTTCCCGT 59.928 52.381 1.91 0.00 33.92 5.28
3867 4013 1.071699 TGAGACAAGAAAGGGTTCCCG 59.928 52.381 1.91 0.00 33.92 5.14
3868 4014 2.106684 ACTGAGACAAGAAAGGGTTCCC 59.893 50.000 0.00 0.00 33.92 3.97
3869 4015 3.493767 ACTGAGACAAGAAAGGGTTCC 57.506 47.619 0.00 0.00 33.92 3.62
3870 4016 3.815962 GGAACTGAGACAAGAAAGGGTTC 59.184 47.826 0.00 0.00 33.41 3.62
3871 4017 3.202151 TGGAACTGAGACAAGAAAGGGTT 59.798 43.478 0.00 0.00 0.00 4.11
3872 4018 2.777692 TGGAACTGAGACAAGAAAGGGT 59.222 45.455 0.00 0.00 0.00 4.34
3873 4019 3.142174 GTGGAACTGAGACAAGAAAGGG 58.858 50.000 0.00 0.00 0.00 3.95
3874 4020 2.802816 CGTGGAACTGAGACAAGAAAGG 59.197 50.000 0.00 0.00 31.75 3.11
3875 4021 2.221981 GCGTGGAACTGAGACAAGAAAG 59.778 50.000 0.00 0.00 31.75 2.62
3876 4022 2.210116 GCGTGGAACTGAGACAAGAAA 58.790 47.619 0.00 0.00 31.75 2.52
3877 4023 1.865865 GCGTGGAACTGAGACAAGAA 58.134 50.000 0.00 0.00 31.75 2.52
3878 4024 0.318699 CGCGTGGAACTGAGACAAGA 60.319 55.000 0.00 0.00 31.75 3.02
3879 4025 0.318699 TCGCGTGGAACTGAGACAAG 60.319 55.000 5.77 0.00 31.75 3.16
3880 4026 0.596600 GTCGCGTGGAACTGAGACAA 60.597 55.000 5.77 0.00 38.88 3.18
3881 4027 1.007734 GTCGCGTGGAACTGAGACA 60.008 57.895 5.77 0.00 38.88 3.41
3882 4028 0.729816 GAGTCGCGTGGAACTGAGAC 60.730 60.000 5.77 0.00 39.14 3.36
3883 4029 1.170290 TGAGTCGCGTGGAACTGAGA 61.170 55.000 5.77 0.00 31.75 3.27
3884 4030 0.109086 ATGAGTCGCGTGGAACTGAG 60.109 55.000 5.77 0.00 31.75 3.35
3885 4031 0.109272 GATGAGTCGCGTGGAACTGA 60.109 55.000 5.77 0.00 31.75 3.41
3886 4032 0.388520 TGATGAGTCGCGTGGAACTG 60.389 55.000 5.77 0.00 31.75 3.16
3887 4033 0.109086 CTGATGAGTCGCGTGGAACT 60.109 55.000 5.77 0.82 31.75 3.01
3888 4034 1.078759 CCTGATGAGTCGCGTGGAAC 61.079 60.000 5.77 0.00 0.00 3.62
3889 4035 1.215382 CCTGATGAGTCGCGTGGAA 59.785 57.895 5.77 0.00 0.00 3.53
3890 4036 2.885113 CCTGATGAGTCGCGTGGA 59.115 61.111 5.77 0.00 0.00 4.02
3891 4037 2.887568 GCCTGATGAGTCGCGTGG 60.888 66.667 5.77 0.00 0.00 4.94
3892 4038 1.485838 GATGCCTGATGAGTCGCGTG 61.486 60.000 5.77 0.00 0.00 5.34
3893 4039 1.227089 GATGCCTGATGAGTCGCGT 60.227 57.895 5.77 0.00 0.00 6.01
3894 4040 2.298629 CGATGCCTGATGAGTCGCG 61.299 63.158 0.00 0.00 0.00 5.87
3895 4041 3.622756 CGATGCCTGATGAGTCGC 58.377 61.111 0.00 0.00 0.00 5.19
3896 4042 1.213733 CTGCGATGCCTGATGAGTCG 61.214 60.000 0.00 0.00 35.56 4.18
3897 4043 0.879400 CCTGCGATGCCTGATGAGTC 60.879 60.000 0.00 0.00 0.00 3.36
3898 4044 1.145598 CCTGCGATGCCTGATGAGT 59.854 57.895 0.00 0.00 0.00 3.41
3899 4045 1.597302 CCCTGCGATGCCTGATGAG 60.597 63.158 0.00 0.00 0.00 2.90
3900 4046 2.507452 CCCTGCGATGCCTGATGA 59.493 61.111 0.00 0.00 0.00 2.92
3901 4047 3.285215 GCCCTGCGATGCCTGATG 61.285 66.667 0.00 0.00 0.00 3.07
3902 4048 3.472943 GAGCCCTGCGATGCCTGAT 62.473 63.158 0.00 0.00 0.00 2.90
3903 4049 4.166888 GAGCCCTGCGATGCCTGA 62.167 66.667 0.00 0.00 0.00 3.86
3904 4050 3.769369 ATGAGCCCTGCGATGCCTG 62.769 63.158 0.00 0.00 0.00 4.85
3905 4051 3.472943 GATGAGCCCTGCGATGCCT 62.473 63.158 0.00 0.00 0.00 4.75
3906 4052 2.976903 GATGAGCCCTGCGATGCC 60.977 66.667 0.00 0.00 0.00 4.40
3907 4053 2.976903 GGATGAGCCCTGCGATGC 60.977 66.667 0.00 0.00 0.00 3.91
3908 4054 2.664185 CGGATGAGCCCTGCGATG 60.664 66.667 0.00 0.00 0.00 3.84
3909 4055 4.615815 GCGGATGAGCCCTGCGAT 62.616 66.667 0.00 0.00 0.00 4.58
3918 4064 3.120086 ATTTCCCCCGGCGGATGAG 62.120 63.158 30.79 10.65 0.00 2.90
3919 4065 3.093835 ATTTCCCCCGGCGGATGA 61.094 61.111 30.79 20.30 0.00 2.92
3920 4066 2.594592 GATTTCCCCCGGCGGATG 60.595 66.667 30.79 18.09 0.00 3.51
3921 4067 2.772622 AGATTTCCCCCGGCGGAT 60.773 61.111 30.79 12.89 0.00 4.18
3922 4068 3.476419 GAGATTTCCCCCGGCGGA 61.476 66.667 30.79 2.90 0.00 5.54
3923 4069 4.910585 CGAGATTTCCCCCGGCGG 62.911 72.222 21.46 21.46 0.00 6.13
3924 4070 4.910585 CCGAGATTTCCCCCGGCG 62.911 72.222 0.00 0.00 35.29 6.46
3925 4071 4.564110 CCCGAGATTTCCCCCGGC 62.564 72.222 0.00 0.00 40.56 6.13
3926 4072 2.766651 TCCCGAGATTTCCCCCGG 60.767 66.667 0.00 0.00 41.47 5.73
3927 4073 2.808206 CCTCCCGAGATTTCCCCCG 61.808 68.421 0.00 0.00 0.00 5.73
3928 4074 2.452937 CCCTCCCGAGATTTCCCCC 61.453 68.421 0.00 0.00 0.00 5.40
3929 4075 2.452937 CCCCTCCCGAGATTTCCCC 61.453 68.421 0.00 0.00 0.00 4.81
3930 4076 0.986550 TTCCCCTCCCGAGATTTCCC 60.987 60.000 0.00 0.00 0.00 3.97
3931 4077 1.141185 ATTCCCCTCCCGAGATTTCC 58.859 55.000 0.00 0.00 0.00 3.13
3932 4078 1.202818 CCATTCCCCTCCCGAGATTTC 60.203 57.143 0.00 0.00 0.00 2.17
3933 4079 0.846693 CCATTCCCCTCCCGAGATTT 59.153 55.000 0.00 0.00 0.00 2.17
3934 4080 1.062488 CCCATTCCCCTCCCGAGATT 61.062 60.000 0.00 0.00 0.00 2.40
3935 4081 1.462238 CCCATTCCCCTCCCGAGAT 60.462 63.158 0.00 0.00 0.00 2.75
3936 4082 2.040884 CCCATTCCCCTCCCGAGA 60.041 66.667 0.00 0.00 0.00 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.