Multiple sequence alignment - TraesCS5A01G149100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G149100 chr5A 100.000 4442 0 0 1 4442 326722396 326717955 0.000000e+00 8203.0
1 TraesCS5A01G149100 chr5A 95.745 94 4 0 2685 2778 326719613 326719706 7.700000e-33 152.0
2 TraesCS5A01G149100 chr5A 82.500 120 17 4 2519 2637 311968045 311967929 7.860000e-18 102.0
3 TraesCS5A01G149100 chr5A 92.453 53 4 0 1442 1494 313883887 313883939 4.760000e-10 76.8
4 TraesCS5A01G149100 chr5D 94.044 2233 90 16 482 2700 230016113 230018316 0.000000e+00 3347.0
5 TraesCS5A01G149100 chr5D 93.776 964 32 5 2738 3674 230018325 230019287 0.000000e+00 1423.0
6 TraesCS5A01G149100 chr5D 89.749 439 28 13 3 438 230015685 230016109 3.020000e-151 545.0
7 TraesCS5A01G149100 chr5D 90.580 138 13 0 4305 4442 230019610 230019747 2.730000e-42 183.0
8 TraesCS5A01G149100 chr5D 86.250 160 14 3 3704 3863 230019390 230019541 2.750000e-37 167.0
9 TraesCS5A01G149100 chr1D 81.838 1360 176 39 992 2300 106324171 106322832 0.000000e+00 1077.0
10 TraesCS5A01G149100 chr1D 81.829 831 86 32 2777 3548 106322719 106321895 4.850000e-179 638.0
11 TraesCS5A01G149100 chr1A 81.003 1416 193 45 940 2298 107093958 107095354 0.000000e+00 1055.0
12 TraesCS5A01G149100 chr1A 82.080 798 79 25 2774 3511 107095466 107096259 1.360000e-174 623.0
13 TraesCS5A01G149100 chr1B 81.186 776 101 17 940 1686 160664488 160665247 2.300000e-162 582.0
14 TraesCS5A01G149100 chr1B 89.234 418 44 1 3891 4307 375862557 375862140 5.090000e-144 521.0
15 TraesCS5A01G149100 chr1B 88.863 422 45 2 3888 4308 37268438 37268018 6.590000e-143 518.0
16 TraesCS5A01G149100 chr1B 81.591 641 82 15 1688 2300 160665368 160666000 8.580000e-137 497.0
17 TraesCS5A01G149100 chr1B 80.583 515 45 23 2774 3235 160666109 160666621 3.290000e-91 346.0
18 TraesCS5A01G149100 chr1B 87.129 202 16 8 3335 3529 160666964 160667162 2.080000e-53 220.0
19 TraesCS5A01G149100 chr1B 76.824 233 33 12 2450 2677 563313764 563313548 1.310000e-20 111.0
20 TraesCS5A01G149100 chr1B 75.556 225 44 7 2450 2671 563439730 563439514 2.830000e-17 100.0
21 TraesCS5A01G149100 chr1B 85.714 63 9 0 2519 2581 149158891 149158829 2.870000e-07 67.6
22 TraesCS5A01G149100 chr6A 89.362 423 41 4 3884 4304 503384229 503384649 3.040000e-146 529.0
23 TraesCS5A01G149100 chr6A 89.048 420 41 5 3887 4304 47887539 47887123 2.370000e-142 516.0
24 TraesCS5A01G149100 chr6A 91.837 98 4 2 2682 2779 190660342 190660435 2.790000e-27 134.0
25 TraesCS5A01G149100 chr2A 88.626 422 45 3 3885 4305 207579597 207580016 1.100000e-140 510.0
26 TraesCS5A01G149100 chr2A 77.947 263 42 13 2350 2604 39252498 39252752 2.770000e-32 150.0
27 TraesCS5A01G149100 chr2A 93.684 95 2 2 2688 2781 632952905 632952996 5.990000e-29 139.0
28 TraesCS5A01G149100 chr2A 76.442 208 32 10 70 268 141276862 141277061 3.660000e-16 97.1
29 TraesCS5A01G149100 chr7D 88.626 422 40 6 3885 4304 69009755 69009340 1.430000e-139 507.0
30 TraesCS5A01G149100 chr7D 88.389 422 44 4 3887 4304 435434789 435435209 1.840000e-138 503.0
31 TraesCS5A01G149100 chr7D 90.291 103 7 3 2677 2778 232932513 232932413 1.000000e-26 132.0
32 TraesCS5A01G149100 chr7B 88.263 426 44 6 3885 4306 720818276 720817853 5.130000e-139 505.0
33 TraesCS5A01G149100 chr7B 94.737 95 2 3 2691 2782 115287 115193 1.290000e-30 145.0
34 TraesCS5A01G149100 chr7B 93.750 96 3 3 2688 2780 115194 115289 1.670000e-29 141.0
35 TraesCS5A01G149100 chr3A 87.731 432 50 3 3878 4307 111818655 111819085 6.630000e-138 501.0
36 TraesCS5A01G149100 chr3A 93.478 92 3 1 2690 2781 710277969 710277881 2.790000e-27 134.0
37 TraesCS5A01G149100 chr3B 95.652 92 3 1 2688 2778 795334320 795334411 3.580000e-31 147.0
38 TraesCS5A01G149100 chr2D 93.617 94 2 1 2688 2781 435047482 435047571 2.150000e-28 137.0
39 TraesCS5A01G149100 chr2D 73.770 427 62 26 74 459 133263780 133264197 6.030000e-24 122.0
40 TraesCS5A01G149100 chr3D 76.632 291 33 19 2303 2575 41777809 41778082 1.300000e-25 128.0
41 TraesCS5A01G149100 chr3D 86.364 66 9 0 2509 2574 189557756 189557691 6.160000e-09 73.1
42 TraesCS5A01G149100 chr5B 94.340 53 2 1 1442 1494 263525553 263525604 3.680000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G149100 chr5A 326717955 326722396 4441 True 8203.00 8203 100.00000 1 4442 1 chr5A.!!$R2 4441
1 TraesCS5A01G149100 chr5D 230015685 230019747 4062 False 1133.00 3347 90.87980 3 4442 5 chr5D.!!$F1 4439
2 TraesCS5A01G149100 chr1D 106321895 106324171 2276 True 857.50 1077 81.83350 992 3548 2 chr1D.!!$R1 2556
3 TraesCS5A01G149100 chr1A 107093958 107096259 2301 False 839.00 1055 81.54150 940 3511 2 chr1A.!!$F1 2571
4 TraesCS5A01G149100 chr1B 160664488 160667162 2674 False 411.25 582 82.62225 940 3529 4 chr1B.!!$F1 2589

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
459 461 0.034186 TGTGGGGCATCATCCAGTTC 60.034 55.0 0.00 0.00 33.13 3.01 F
461 463 0.703488 TGGGGCATCATCCAGTTCAA 59.297 50.0 0.00 0.00 0.00 2.69 F
2323 2619 0.890542 GCATCTGCACCTTGGTGTGA 60.891 55.0 19.47 17.22 41.59 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2291 2587 0.167470 CAGATGCACTCGCCAAACAG 59.833 55.0 0.0 0.0 37.32 3.16 R
2413 2712 5.395103 CCACAAACTCCTTGAATGTCCAAAA 60.395 40.0 0.0 0.0 38.50 2.44 R
4318 5085 0.035176 CACAAAAATGTGGCCCCAGG 59.965 55.0 0.0 0.0 36.24 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 111 5.204409 TCTTTGCATTAATCCATCCATGC 57.796 39.130 0.00 0.00 42.07 4.06
114 115 4.695396 TGCATTAATCCATCCATGCAAAC 58.305 39.130 3.24 0.00 46.95 2.93
118 119 9.992241 TGCATTAATCCATCCATGCAAACCATG 62.992 40.741 3.24 0.00 46.95 3.66
130 131 1.066716 CAAACCATGCCACCCAATCAG 60.067 52.381 0.00 0.00 0.00 2.90
133 134 0.615544 CCATGCCACCCAATCAGGTT 60.616 55.000 0.00 0.00 38.39 3.50
147 148 5.123186 CCAATCAGGTTACGCATGTCTTTTA 59.877 40.000 0.00 0.00 0.00 1.52
148 149 6.183360 CCAATCAGGTTACGCATGTCTTTTAT 60.183 38.462 0.00 0.00 0.00 1.40
149 150 7.011950 CCAATCAGGTTACGCATGTCTTTTATA 59.988 37.037 0.00 0.00 0.00 0.98
232 233 3.144657 TGGTCATGGATGGCATATGTC 57.855 47.619 0.00 0.00 33.08 3.06
233 234 2.442502 TGGTCATGGATGGCATATGTCA 59.557 45.455 13.32 13.32 33.08 3.58
240 241 4.146564 TGGATGGCATATGTCATGGAAAG 58.853 43.478 26.91 0.00 40.99 2.62
255 256 7.395772 TGTCATGGAAAGTTGGAGCAAAATATA 59.604 33.333 0.00 0.00 0.00 0.86
280 281 3.853831 TCATGCTTGCCATTGTGTTAG 57.146 42.857 0.00 0.00 29.71 2.34
291 292 7.055667 TGCCATTGTGTTAGGTTCAATTAAA 57.944 32.000 0.00 0.00 30.74 1.52
292 293 7.500992 TGCCATTGTGTTAGGTTCAATTAAAA 58.499 30.769 0.00 0.00 30.74 1.52
293 294 7.987458 TGCCATTGTGTTAGGTTCAATTAAAAA 59.013 29.630 0.00 0.00 30.74 1.94
359 360 8.451748 GTTTTAAAAATGTAAAGCCCAAACACA 58.548 29.630 1.31 0.00 0.00 3.72
381 383 5.466393 ACACTTGCATTTGTTTTCCATTAGC 59.534 36.000 0.00 0.00 0.00 3.09
405 407 8.471609 AGCTTTAGTTGTTTTAAGCACCTTTTA 58.528 29.630 0.00 0.00 44.08 1.52
412 414 8.341903 GTTGTTTTAAGCACCTTTTAATGCATT 58.658 29.630 17.56 17.56 44.59 3.56
413 415 8.443953 TGTTTTAAGCACCTTTTAATGCATTT 57.556 26.923 18.75 1.81 44.59 2.32
414 416 8.555361 TGTTTTAAGCACCTTTTAATGCATTTC 58.445 29.630 18.75 0.00 44.59 2.17
438 440 0.899717 AATGTGGTTCCTGCGGCAAT 60.900 50.000 3.44 0.00 0.00 3.56
439 441 0.034574 ATGTGGTTCCTGCGGCAATA 60.035 50.000 3.44 0.00 0.00 1.90
441 443 0.381801 GTGGTTCCTGCGGCAATATG 59.618 55.000 3.44 0.00 0.00 1.78
442 444 0.034574 TGGTTCCTGCGGCAATATGT 60.035 50.000 3.44 0.00 0.00 2.29
443 445 0.381801 GGTTCCTGCGGCAATATGTG 59.618 55.000 3.44 0.00 0.00 3.21
444 446 0.381801 GTTCCTGCGGCAATATGTGG 59.618 55.000 3.44 0.13 0.00 4.17
445 447 0.751277 TTCCTGCGGCAATATGTGGG 60.751 55.000 3.44 0.00 0.00 4.61
446 448 2.195567 CCTGCGGCAATATGTGGGG 61.196 63.158 3.44 0.00 0.00 4.96
447 449 2.832661 TGCGGCAATATGTGGGGC 60.833 61.111 0.00 0.00 0.00 5.80
448 450 2.832661 GCGGCAATATGTGGGGCA 60.833 61.111 0.00 0.00 0.00 5.36
449 451 2.202395 GCGGCAATATGTGGGGCAT 61.202 57.895 0.00 0.00 41.42 4.40
450 452 1.959085 CGGCAATATGTGGGGCATC 59.041 57.895 0.00 0.00 38.94 3.91
451 453 0.822944 CGGCAATATGTGGGGCATCA 60.823 55.000 0.00 0.00 38.94 3.07
452 454 1.636148 GGCAATATGTGGGGCATCAT 58.364 50.000 0.00 0.00 38.94 2.45
453 455 1.547372 GGCAATATGTGGGGCATCATC 59.453 52.381 0.00 0.00 38.94 2.92
454 456 1.547372 GCAATATGTGGGGCATCATCC 59.453 52.381 0.00 0.00 38.94 3.51
455 457 2.879154 CAATATGTGGGGCATCATCCA 58.121 47.619 0.00 0.00 38.94 3.41
456 458 2.823747 CAATATGTGGGGCATCATCCAG 59.176 50.000 0.00 0.00 38.94 3.86
457 459 1.521764 TATGTGGGGCATCATCCAGT 58.478 50.000 0.00 0.00 38.94 4.00
458 460 0.632835 ATGTGGGGCATCATCCAGTT 59.367 50.000 0.00 0.00 33.13 3.16
459 461 0.034186 TGTGGGGCATCATCCAGTTC 60.034 55.000 0.00 0.00 33.13 3.01
460 462 0.034186 GTGGGGCATCATCCAGTTCA 60.034 55.000 0.00 0.00 33.13 3.18
461 463 0.703488 TGGGGCATCATCCAGTTCAA 59.297 50.000 0.00 0.00 0.00 2.69
462 464 1.076841 TGGGGCATCATCCAGTTCAAA 59.923 47.619 0.00 0.00 0.00 2.69
463 465 1.753073 GGGGCATCATCCAGTTCAAAG 59.247 52.381 0.00 0.00 0.00 2.77
464 466 2.621407 GGGGCATCATCCAGTTCAAAGA 60.621 50.000 0.00 0.00 0.00 2.52
465 467 3.091545 GGGCATCATCCAGTTCAAAGAA 58.908 45.455 0.00 0.00 0.00 2.52
466 468 3.511146 GGGCATCATCCAGTTCAAAGAAA 59.489 43.478 0.00 0.00 0.00 2.52
467 469 4.161001 GGGCATCATCCAGTTCAAAGAAAT 59.839 41.667 0.00 0.00 0.00 2.17
468 470 5.360714 GGGCATCATCCAGTTCAAAGAAATA 59.639 40.000 0.00 0.00 0.00 1.40
469 471 6.041296 GGGCATCATCCAGTTCAAAGAAATAT 59.959 38.462 0.00 0.00 0.00 1.28
470 472 7.418254 GGGCATCATCCAGTTCAAAGAAATATT 60.418 37.037 0.00 0.00 0.00 1.28
471 473 7.437267 GGCATCATCCAGTTCAAAGAAATATTG 59.563 37.037 0.00 0.00 0.00 1.90
472 474 7.437267 GCATCATCCAGTTCAAAGAAATATTGG 59.563 37.037 0.00 0.00 0.00 3.16
473 475 7.408756 TCATCCAGTTCAAAGAAATATTGGG 57.591 36.000 0.00 0.00 0.00 4.12
474 476 6.380846 TCATCCAGTTCAAAGAAATATTGGGG 59.619 38.462 0.00 0.00 0.00 4.96
475 477 5.022787 TCCAGTTCAAAGAAATATTGGGGG 58.977 41.667 0.00 0.00 0.00 5.40
476 478 4.383010 CCAGTTCAAAGAAATATTGGGGGC 60.383 45.833 0.00 0.00 0.00 5.80
477 479 4.467438 CAGTTCAAAGAAATATTGGGGGCT 59.533 41.667 0.00 0.00 0.00 5.19
478 480 5.046376 CAGTTCAAAGAAATATTGGGGGCTT 60.046 40.000 0.00 0.00 0.00 4.35
479 481 5.046376 AGTTCAAAGAAATATTGGGGGCTTG 60.046 40.000 0.00 0.00 0.00 4.01
480 482 3.774216 TCAAAGAAATATTGGGGGCTTGG 59.226 43.478 0.00 0.00 0.00 3.61
500 502 6.519043 GCTTGGGTAGTGATATGAGCTCATTA 60.519 42.308 32.94 16.71 37.76 1.90
505 507 8.725148 GGGTAGTGATATGAGCTCATTATTTTG 58.275 37.037 32.94 0.00 37.76 2.44
570 572 1.941294 CTGCAGATTGCTGATCTCCAC 59.059 52.381 8.42 0.00 43.32 4.02
591 593 9.751542 CTCCACTTGTTAGTTCTTATTCGATAT 57.248 33.333 0.00 0.00 30.26 1.63
677 679 1.421410 GGTGCGCTGGATTAGTGTCG 61.421 60.000 9.73 0.00 39.16 4.35
691 693 1.001974 AGTGTCGCACCTCTAATTGCA 59.998 47.619 6.39 0.00 38.76 4.08
825 827 2.257691 ATTCTGCCTATCTGCTGCTG 57.742 50.000 0.00 0.00 0.00 4.41
831 833 2.009042 GCCTATCTGCTGCTGTCGTTT 61.009 52.381 0.00 0.00 0.00 3.60
862 864 2.949177 TCAGGTTGCACCATACAACT 57.051 45.000 6.59 0.00 45.34 3.16
896 898 2.479560 GCCACCATAAAAATCGCTGACC 60.480 50.000 0.00 0.00 0.00 4.02
910 912 3.056328 GACCCGCAAACCTCCTGC 61.056 66.667 0.00 0.00 36.41 4.85
918 920 0.961753 CAAACCTCCTGCCTTGTTCC 59.038 55.000 0.00 0.00 0.00 3.62
928 930 1.026718 GCCTTGTTCCCTGTGATCCG 61.027 60.000 0.00 0.00 0.00 4.18
931 933 2.511600 GTTCCCTGTGATCCGCCG 60.512 66.667 0.00 0.00 0.00 6.46
954 956 1.678101 GCAAGAGCCAGCCGAAATAAT 59.322 47.619 0.00 0.00 33.58 1.28
966 968 3.432326 GCCGAAATAATCTCTGTCCCTGT 60.432 47.826 0.00 0.00 0.00 4.00
970 972 5.874810 CGAAATAATCTCTGTCCCTGTTTCA 59.125 40.000 0.00 0.00 0.00 2.69
977 979 2.029020 TCTGTCCCTGTTTCATCACTCG 60.029 50.000 0.00 0.00 0.00 4.18
980 982 1.697432 TCCCTGTTTCATCACTCGGTT 59.303 47.619 0.00 0.00 0.00 4.44
983 985 2.549992 CCTGTTTCATCACTCGGTTCCA 60.550 50.000 0.00 0.00 0.00 3.53
1062 1064 2.742372 CCGGGCAAGTCCAAGTCG 60.742 66.667 0.00 0.00 36.21 4.18
1150 1152 1.841556 AAGTCCAAGTCCTCGGCCA 60.842 57.895 2.24 0.00 0.00 5.36
1270 1272 2.174639 TCCATTTCTCACCAACCACACT 59.825 45.455 0.00 0.00 0.00 3.55
1276 1278 1.145156 CACCAACCACACTCCGTCA 59.855 57.895 0.00 0.00 0.00 4.35
1473 1487 4.881850 GGGACGATCCAAATGTAAGTTGAT 59.118 41.667 6.41 0.00 46.37 2.57
1563 1590 7.334421 TGTCTACTTAGAAATTCAGGATGCAAC 59.666 37.037 0.00 0.00 32.09 4.17
1579 1606 1.463444 GCAACGGGTGATAACTGACAC 59.537 52.381 0.00 0.00 36.44 3.67
1809 1969 3.817647 GGGATAGTGGTCTCATGCAAATC 59.182 47.826 0.00 0.00 0.00 2.17
1905 2065 3.101643 TGGTCATGAGTAGCTACTGGT 57.898 47.619 30.70 15.57 36.50 4.00
1998 2178 6.437094 GCATCTATTGCCTCTCATTTCTTTC 58.563 40.000 0.00 0.00 46.15 2.62
2003 2184 1.950484 GCCTCTCATTTCTTTCCGGCA 60.950 52.381 0.00 0.00 36.37 5.69
2130 2311 6.046593 AGACAGTAAAATGAACACGTTCTCA 58.953 36.000 11.01 0.00 40.14 3.27
2145 2335 4.870991 ACGTTCTCATTCTAAAGCTTAGGC 59.129 41.667 0.00 0.00 39.06 3.93
2263 2459 9.148104 GAATATGTTACTGACCTCGTAAGTTTT 57.852 33.333 0.00 0.00 39.48 2.43
2279 2475 7.968956 TCGTAAGTTTTTCTTGCATTTGTACAA 59.031 29.630 3.59 3.59 38.39 2.41
2285 2581 7.636259 TTTTCTTGCATTTGTACAACTATGC 57.364 32.000 27.31 27.31 42.75 3.14
2300 2596 3.836949 ACTATGCAATTTCTGTTTGGCG 58.163 40.909 0.00 0.00 0.00 5.69
2323 2619 0.890542 GCATCTGCACCTTGGTGTGA 60.891 55.000 19.47 17.22 41.59 3.58
2396 2695 1.061411 CTCCATTGCGCGATGTGTG 59.939 57.895 30.79 20.08 0.00 3.82
2407 2706 2.218302 CGCGATGTGTGTGCAAAAATTT 59.782 40.909 0.00 0.00 0.00 1.82
2413 2712 6.509837 CGATGTGTGTGCAAAAATTTGTGATT 60.510 34.615 12.75 0.00 40.24 2.57
2433 2732 6.986231 GTGATTTTTGGACATTCAAGGAGTTT 59.014 34.615 0.00 0.00 0.00 2.66
2439 2738 2.622942 GACATTCAAGGAGTTTGTGGCA 59.377 45.455 0.00 0.00 38.01 4.92
2440 2739 3.030291 ACATTCAAGGAGTTTGTGGCAA 58.970 40.909 0.00 0.00 38.01 4.52
2485 2784 6.645003 ACTTTGAAAAAGAACACTGTTTGGAC 59.355 34.615 6.73 0.00 0.00 4.02
2495 2794 3.067601 ACACTGTTTGGACCCGATTTTTC 59.932 43.478 0.00 0.00 0.00 2.29
2497 2796 1.964933 TGTTTGGACCCGATTTTTCCC 59.035 47.619 0.00 0.00 0.00 3.97
2535 2834 3.235750 TGGAATGTCCAAACACCATGA 57.764 42.857 0.00 0.00 45.00 3.07
2543 2842 4.574013 TGTCCAAACACCATGAAAATTTGC 59.426 37.500 0.00 0.00 0.00 3.68
2554 2853 4.734398 TGAAAATTTGCACACTCCTTGT 57.266 36.364 0.00 0.00 39.97 3.16
2633 2939 8.741101 TCCTTTTGTGAATTTATTGTTCATCG 57.259 30.769 0.00 0.00 37.84 3.84
2652 2958 4.101448 GTGCAGATGACCCGGGCT 62.101 66.667 24.08 6.44 0.00 5.19
2653 2959 3.785859 TGCAGATGACCCGGGCTC 61.786 66.667 24.08 17.99 0.00 4.70
2654 2960 3.785859 GCAGATGACCCGGGCTCA 61.786 66.667 24.08 23.19 0.00 4.26
2655 2961 2.503061 CAGATGACCCGGGCTCAG 59.497 66.667 24.08 8.41 0.00 3.35
2656 2962 2.060383 CAGATGACCCGGGCTCAGA 61.060 63.158 24.08 2.92 0.00 3.27
2657 2963 2.060980 AGATGACCCGGGCTCAGAC 61.061 63.158 24.08 19.17 0.00 3.51
2658 2964 3.432051 GATGACCCGGGCTCAGACG 62.432 68.421 24.08 0.00 0.00 4.18
2694 3001 6.055588 TGTTTGGCCTGCTAAGATTATACTC 58.944 40.000 3.32 0.00 0.00 2.59
2700 3007 5.952947 GCCTGCTAAGATTATACTCCCTCTA 59.047 44.000 0.00 0.00 0.00 2.43
2703 3010 9.702253 CCTGCTAAGATTATACTCCCTCTATAA 57.298 37.037 0.00 0.00 0.00 0.98
2718 3025 9.796120 CTCCCTCTATAAAGAAATATAAGAGCG 57.204 37.037 0.00 0.00 0.00 5.03
2719 3026 9.310449 TCCCTCTATAAAGAAATATAAGAGCGT 57.690 33.333 0.00 0.00 0.00 5.07
2720 3027 9.930693 CCCTCTATAAAGAAATATAAGAGCGTT 57.069 33.333 0.00 0.00 0.00 4.84
2734 3041 4.539509 AGAGCGTTTAGATCACTACTCG 57.460 45.455 0.00 0.00 37.82 4.18
2735 3042 4.190001 AGAGCGTTTAGATCACTACTCGA 58.810 43.478 0.00 0.00 37.82 4.04
2736 3043 4.271533 AGAGCGTTTAGATCACTACTCGAG 59.728 45.833 11.84 11.84 37.82 4.04
2802 3109 6.430000 ACAAACTATTCGCACATAGAAAGGTT 59.570 34.615 6.22 0.00 31.92 3.50
2807 3114 4.481930 TCGCACATAGAAAGGTTTTGTG 57.518 40.909 0.00 0.00 40.42 3.33
2817 3124 1.106944 AGGTTTTGTGGAGGGTTGCG 61.107 55.000 0.00 0.00 0.00 4.85
2900 3213 3.457234 TGGCTAGATGCAAACAGATACG 58.543 45.455 0.00 0.00 45.15 3.06
3004 3338 3.264193 ACAAATGAGCACCATCTACCTGA 59.736 43.478 0.00 0.00 33.53 3.86
3034 3369 7.274447 ACTTTCAACACAATCCATTCATGTTT 58.726 30.769 0.00 0.00 31.25 2.83
3057 3392 2.289694 ACCAAGAAATCCAGAGTCACGG 60.290 50.000 0.00 0.00 0.00 4.94
3318 3683 5.679734 ACTAAGCATTCACACTTCACTTG 57.320 39.130 0.00 0.00 0.00 3.16
3399 4040 1.338973 CTCAAGCAAGCAAGGAAAGCA 59.661 47.619 0.00 0.00 0.00 3.91
3511 4159 6.646653 CACTAACTTGGTCATACGATGCATAT 59.353 38.462 0.00 0.00 0.00 1.78
3592 4240 0.320421 TTGGCGTCAGGTAGCACTTC 60.320 55.000 0.00 0.00 34.54 3.01
3618 4266 7.939039 CCCACTGTACTTAATGGATGATTGTAT 59.061 37.037 0.00 0.00 33.80 2.29
3622 4270 8.607441 TGTACTTAATGGATGATTGTATGCTC 57.393 34.615 0.00 0.00 0.00 4.26
3639 4287 2.222886 GCTCCGCTCAGTCATACTAGA 58.777 52.381 0.00 0.00 0.00 2.43
3645 4293 4.757657 CCGCTCAGTCATACTAGACACTAT 59.242 45.833 0.00 0.00 40.98 2.12
3661 4309 3.198068 CACTATAACATGAAGCGCACCT 58.802 45.455 11.47 0.00 0.00 4.00
3662 4310 4.142026 ACACTATAACATGAAGCGCACCTA 60.142 41.667 11.47 0.00 0.00 3.08
3674 4322 5.522460 TGAAGCGCACCTATTAATCTTGTAC 59.478 40.000 11.47 0.00 0.00 2.90
3675 4323 5.277857 AGCGCACCTATTAATCTTGTACT 57.722 39.130 11.47 0.00 0.00 2.73
3676 4324 5.290386 AGCGCACCTATTAATCTTGTACTC 58.710 41.667 11.47 0.00 0.00 2.59
3677 4325 5.069251 AGCGCACCTATTAATCTTGTACTCT 59.931 40.000 11.47 0.00 0.00 3.24
3678 4326 5.402867 GCGCACCTATTAATCTTGTACTCTC 59.597 44.000 0.30 0.00 0.00 3.20
3680 4328 6.858993 CGCACCTATTAATCTTGTACTCTCTC 59.141 42.308 0.00 0.00 0.00 3.20
3681 4329 7.149307 GCACCTATTAATCTTGTACTCTCTCC 58.851 42.308 0.00 0.00 0.00 3.71
3682 4330 7.364200 CACCTATTAATCTTGTACTCTCTCCG 58.636 42.308 0.00 0.00 0.00 4.63
3683 4331 7.013464 CACCTATTAATCTTGTACTCTCTCCGT 59.987 40.741 0.00 0.00 0.00 4.69
3684 4332 7.229106 ACCTATTAATCTTGTACTCTCTCCGTC 59.771 40.741 0.00 0.00 0.00 4.79
3685 4333 5.831702 TTAATCTTGTACTCTCTCCGTCC 57.168 43.478 0.00 0.00 0.00 4.79
3686 4334 2.125773 TCTTGTACTCTCTCCGTCCC 57.874 55.000 0.00 0.00 0.00 4.46
3687 4335 0.733729 CTTGTACTCTCTCCGTCCCG 59.266 60.000 0.00 0.00 0.00 5.14
3688 4336 0.037303 TTGTACTCTCTCCGTCCCGT 59.963 55.000 0.00 0.00 0.00 5.28
3690 4338 1.278985 TGTACTCTCTCCGTCCCGTAA 59.721 52.381 0.00 0.00 0.00 3.18
3692 4340 1.390565 ACTCTCTCCGTCCCGTAATG 58.609 55.000 0.00 0.00 0.00 1.90
3694 4342 1.065701 CTCTCTCCGTCCCGTAATGTG 59.934 57.143 0.00 0.00 0.00 3.21
3695 4343 1.100510 CTCTCCGTCCCGTAATGTGA 58.899 55.000 0.00 0.00 0.00 3.58
3698 4346 0.813184 TCCGTCCCGTAATGTGAGAC 59.187 55.000 0.00 0.00 0.00 3.36
3699 4347 2.939782 CGTCCCGTAATGTGAGACG 58.060 57.895 0.00 0.00 43.52 4.18
3700 4348 1.138047 CGTCCCGTAATGTGAGACGC 61.138 60.000 0.00 0.00 43.07 5.19
3701 4349 0.172803 GTCCCGTAATGTGAGACGCT 59.827 55.000 0.00 0.00 37.75 5.07
3702 4350 0.892755 TCCCGTAATGTGAGACGCTT 59.107 50.000 0.00 0.00 37.75 4.68
3715 4436 6.927416 TGTGAGACGCTTTACTCCTATAAAA 58.073 36.000 0.00 0.00 32.84 1.52
3737 4458 2.211250 TGTTGTAGTACTCGCCTCCT 57.789 50.000 0.00 0.00 0.00 3.69
3758 4479 2.105128 GGCATCCTCGGTCGTGAG 59.895 66.667 0.00 0.00 35.70 3.51
3764 4485 2.567049 CTCGGTCGTGAGTGTCCC 59.433 66.667 0.00 0.00 0.00 4.46
3765 4486 2.987547 TCGGTCGTGAGTGTCCCC 60.988 66.667 0.00 0.00 0.00 4.81
3771 4492 4.008933 GTGAGTGTCCCCTGCGCT 62.009 66.667 9.73 0.00 0.00 5.92
3775 4496 3.050275 GTGTCCCCTGCGCTGTTC 61.050 66.667 9.73 0.00 0.00 3.18
3837 4604 1.143838 CGTCCGATCTTCATGGGCA 59.856 57.895 0.00 0.00 0.00 5.36
3845 4612 2.479566 TCTTCATGGGCACTTCTCAC 57.520 50.000 0.00 0.00 0.00 3.51
3853 4620 3.059982 CACTTCTCACCCAGCCGA 58.940 61.111 0.00 0.00 0.00 5.54
3857 4624 2.436087 CTTCTCACCCAGCCGACGTT 62.436 60.000 0.00 0.00 0.00 3.99
3860 4627 2.030562 CACCCAGCCGACGTTCTT 59.969 61.111 0.00 0.00 0.00 2.52
3873 4640 1.019278 CGTTCTTGGGGTCCATGACG 61.019 60.000 0.00 6.34 37.41 4.35
3881 4648 3.717294 GTCCATGACGGGTGGGCT 61.717 66.667 0.00 0.00 38.32 5.19
3891 4658 4.299796 GGTGGGCTGCAGGGGAAA 62.300 66.667 17.12 0.00 0.00 3.13
3893 4660 4.659172 TGGGCTGCAGGGGAAACG 62.659 66.667 17.12 0.00 0.00 3.60
3894 4661 4.660938 GGGCTGCAGGGGAAACGT 62.661 66.667 17.12 0.00 0.00 3.99
3896 4663 1.077716 GGCTGCAGGGGAAACGTAT 60.078 57.895 17.12 0.00 0.00 3.06
3897 4664 1.095807 GGCTGCAGGGGAAACGTATC 61.096 60.000 17.12 0.00 0.00 2.24
3898 4665 1.095807 GCTGCAGGGGAAACGTATCC 61.096 60.000 17.12 0.00 38.86 2.59
3899 4666 0.810031 CTGCAGGGGAAACGTATCCG 60.810 60.000 5.57 0.00 40.62 4.18
3900 4667 1.523032 GCAGGGGAAACGTATCCGG 60.523 63.158 0.00 0.00 40.62 5.14
3901 4668 1.902556 CAGGGGAAACGTATCCGGT 59.097 57.895 0.00 0.00 40.62 5.28
3902 4669 0.461339 CAGGGGAAACGTATCCGGTG 60.461 60.000 0.00 0.00 40.62 4.94
3903 4670 1.816679 GGGGAAACGTATCCGGTGC 60.817 63.158 0.00 0.00 40.62 5.01
3904 4671 1.078988 GGGAAACGTATCCGGTGCA 60.079 57.895 0.00 0.00 40.62 4.57
3905 4672 1.363885 GGGAAACGTATCCGGTGCAC 61.364 60.000 8.80 8.80 40.62 4.57
3906 4673 1.363885 GGAAACGTATCCGGTGCACC 61.364 60.000 26.78 26.78 38.78 5.01
3907 4674 1.363885 GAAACGTATCCGGTGCACCC 61.364 60.000 29.95 14.41 38.78 4.61
3908 4675 2.114488 AAACGTATCCGGTGCACCCA 62.114 55.000 29.95 17.32 38.78 4.51
3909 4676 2.510691 CGTATCCGGTGCACCCAC 60.511 66.667 29.95 19.80 41.32 4.61
3910 4677 2.666207 GTATCCGGTGCACCCACA 59.334 61.111 29.95 14.22 43.88 4.17
3911 4678 1.743995 GTATCCGGTGCACCCACAC 60.744 63.158 29.95 17.89 43.88 3.82
3912 4679 1.916273 TATCCGGTGCACCCACACT 60.916 57.895 29.95 12.63 43.88 3.55
3913 4680 1.485294 TATCCGGTGCACCCACACTT 61.485 55.000 29.95 11.40 43.88 3.16
3914 4681 1.485294 ATCCGGTGCACCCACACTTA 61.485 55.000 29.95 7.99 43.88 2.24
3915 4682 1.002624 CCGGTGCACCCACACTTAT 60.003 57.895 29.95 0.00 43.88 1.73
3916 4683 1.305219 CCGGTGCACCCACACTTATG 61.305 60.000 29.95 12.22 43.88 1.90
3917 4684 1.305219 CGGTGCACCCACACTTATGG 61.305 60.000 29.95 8.00 43.88 2.74
3918 4685 0.251165 GGTGCACCCACACTTATGGT 60.251 55.000 26.31 0.00 43.88 3.55
3928 4695 1.651987 CACTTATGGTGCTACCGGTG 58.348 55.000 19.93 8.61 42.58 4.94
3929 4696 0.107848 ACTTATGGTGCTACCGGTGC 60.108 55.000 19.93 19.04 42.58 5.01
3930 4697 0.107897 CTTATGGTGCTACCGGTGCA 60.108 55.000 19.93 21.51 42.58 4.57
3943 4710 2.690326 GGTGCACCGGATGTCATAC 58.310 57.895 22.49 0.00 0.00 2.39
3944 4711 0.107897 GGTGCACCGGATGTCATACA 60.108 55.000 22.49 0.00 0.00 2.29
3945 4712 1.475034 GGTGCACCGGATGTCATACAT 60.475 52.381 22.49 0.00 42.43 2.29
3988 4755 8.715191 AAAAATTCTAGCACATTGACAAAACA 57.285 26.923 0.00 0.00 0.00 2.83
3989 4756 7.698836 AAATTCTAGCACATTGACAAAACAC 57.301 32.000 0.00 0.00 0.00 3.32
3990 4757 4.829064 TCTAGCACATTGACAAAACACC 57.171 40.909 0.00 0.00 0.00 4.16
3991 4758 4.203226 TCTAGCACATTGACAAAACACCA 58.797 39.130 0.00 0.00 0.00 4.17
3992 4759 3.883830 AGCACATTGACAAAACACCAA 57.116 38.095 0.00 0.00 0.00 3.67
3993 4760 4.405116 AGCACATTGACAAAACACCAAT 57.595 36.364 0.00 0.00 0.00 3.16
4001 4768 8.326599 CATTGACAAAACACCAATGTATATCG 57.673 34.615 0.00 0.00 41.09 2.92
4002 4769 7.441890 TTGACAAAACACCAATGTATATCGT 57.558 32.000 0.00 0.00 38.45 3.73
4003 4770 7.067532 TGACAAAACACCAATGTATATCGTC 57.932 36.000 0.00 0.00 38.45 4.20
4004 4771 6.651225 TGACAAAACACCAATGTATATCGTCA 59.349 34.615 0.00 0.00 38.45 4.35
4005 4772 6.837992 ACAAAACACCAATGTATATCGTCAC 58.162 36.000 0.00 0.00 38.45 3.67
4006 4773 6.428465 ACAAAACACCAATGTATATCGTCACA 59.572 34.615 0.00 0.00 38.45 3.58
4007 4774 7.041030 ACAAAACACCAATGTATATCGTCACAA 60.041 33.333 0.00 0.00 38.45 3.33
4008 4775 7.441890 AAACACCAATGTATATCGTCACAAA 57.558 32.000 0.00 0.00 38.45 2.83
4009 4776 7.441890 AACACCAATGTATATCGTCACAAAA 57.558 32.000 0.00 0.00 38.45 2.44
4010 4777 7.624360 ACACCAATGTATATCGTCACAAAAT 57.376 32.000 0.00 0.00 37.26 1.82
4011 4778 8.050778 ACACCAATGTATATCGTCACAAAATT 57.949 30.769 0.00 0.00 37.26 1.82
4012 4779 8.519526 ACACCAATGTATATCGTCACAAAATTT 58.480 29.630 0.00 0.00 37.26 1.82
4013 4780 9.009327 CACCAATGTATATCGTCACAAAATTTC 57.991 33.333 0.00 0.00 0.00 2.17
4014 4781 7.908082 ACCAATGTATATCGTCACAAAATTTCG 59.092 33.333 0.00 0.00 0.00 3.46
4015 4782 7.908082 CCAATGTATATCGTCACAAAATTTCGT 59.092 33.333 0.00 0.00 0.00 3.85
4016 4783 9.909043 CAATGTATATCGTCACAAAATTTCGTA 57.091 29.630 0.00 0.00 0.00 3.43
4026 4793 9.638359 CGTCACAAAATTTCGTATAAAAATTCG 57.362 29.630 7.27 5.58 35.75 3.34
4082 4849 9.860650 AATTGACATTAGTGTAATAATAGGCCA 57.139 29.630 5.01 0.00 39.09 5.36
4083 4850 9.860650 ATTGACATTAGTGTAATAATAGGCCAA 57.139 29.630 5.01 0.00 39.09 4.52
4084 4851 9.688091 TTGACATTAGTGTAATAATAGGCCAAA 57.312 29.630 5.01 0.00 39.09 3.28
4085 4852 9.860650 TGACATTAGTGTAATAATAGGCCAAAT 57.139 29.630 5.01 0.00 39.09 2.32
4092 4859 9.067986 AGTGTAATAATAGGCCAAATCTAAAGC 57.932 33.333 5.01 0.00 0.00 3.51
4093 4860 8.297426 GTGTAATAATAGGCCAAATCTAAAGCC 58.703 37.037 5.01 0.00 46.13 4.35
4097 4864 2.672961 GGCCAAATCTAAAGCCCAAC 57.327 50.000 0.00 0.00 39.60 3.77
4098 4865 2.179427 GGCCAAATCTAAAGCCCAACT 58.821 47.619 0.00 0.00 39.60 3.16
4099 4866 2.567169 GGCCAAATCTAAAGCCCAACTT 59.433 45.455 0.00 0.00 41.70 2.66
4100 4867 3.767131 GGCCAAATCTAAAGCCCAACTTA 59.233 43.478 0.00 0.00 37.75 2.24
4101 4868 4.405680 GGCCAAATCTAAAGCCCAACTTAT 59.594 41.667 0.00 0.00 37.75 1.73
4102 4869 5.351458 GCCAAATCTAAAGCCCAACTTATG 58.649 41.667 0.00 0.00 37.75 1.90
4103 4870 5.105351 GCCAAATCTAAAGCCCAACTTATGT 60.105 40.000 0.00 0.00 37.75 2.29
4104 4871 6.574269 GCCAAATCTAAAGCCCAACTTATGTT 60.574 38.462 0.00 0.00 37.75 2.71
4105 4872 7.363443 GCCAAATCTAAAGCCCAACTTATGTTA 60.363 37.037 0.00 0.00 37.75 2.41
4106 4873 8.695456 CCAAATCTAAAGCCCAACTTATGTTAT 58.305 33.333 0.00 0.00 37.75 1.89
4107 4874 9.520204 CAAATCTAAAGCCCAACTTATGTTATG 57.480 33.333 0.00 0.00 37.75 1.90
4108 4875 8.823220 AATCTAAAGCCCAACTTATGTTATGT 57.177 30.769 0.00 0.00 37.75 2.29
4109 4876 9.914834 AATCTAAAGCCCAACTTATGTTATGTA 57.085 29.630 0.00 0.00 37.75 2.29
4110 4877 8.726870 TCTAAAGCCCAACTTATGTTATGTAC 57.273 34.615 0.00 0.00 37.75 2.90
4111 4878 8.545472 TCTAAAGCCCAACTTATGTTATGTACT 58.455 33.333 0.00 0.00 37.75 2.73
4112 4879 9.826574 CTAAAGCCCAACTTATGTTATGTACTA 57.173 33.333 0.00 0.00 37.75 1.82
4114 4881 9.695155 AAAGCCCAACTTATGTTATGTACTATT 57.305 29.630 0.00 0.00 37.75 1.73
4115 4882 8.904099 AGCCCAACTTATGTTATGTACTATTC 57.096 34.615 0.00 0.00 34.60 1.75
4116 4883 8.491134 AGCCCAACTTATGTTATGTACTATTCA 58.509 33.333 0.00 0.00 34.60 2.57
4117 4884 8.774586 GCCCAACTTATGTTATGTACTATTCAG 58.225 37.037 0.00 0.00 34.60 3.02
4118 4885 9.832445 CCCAACTTATGTTATGTACTATTCAGT 57.168 33.333 0.00 0.00 35.38 3.41
4139 4906 9.545105 TTCAGTATTGAATTTGTCATTTTTGCT 57.455 25.926 0.00 0.00 38.37 3.91
4140 4907 9.545105 TCAGTATTGAATTTGTCATTTTTGCTT 57.455 25.926 0.00 0.00 35.70 3.91
4161 4928 7.930513 GCTTTAGTAGCTGTGTTTTGATTTT 57.069 32.000 0.00 0.00 46.77 1.82
4162 4929 7.997071 GCTTTAGTAGCTGTGTTTTGATTTTC 58.003 34.615 0.00 0.00 46.77 2.29
4163 4930 7.114953 GCTTTAGTAGCTGTGTTTTGATTTTCC 59.885 37.037 0.00 0.00 46.77 3.13
4164 4931 7.575414 TTAGTAGCTGTGTTTTGATTTTCCA 57.425 32.000 0.00 0.00 0.00 3.53
4165 4932 5.831997 AGTAGCTGTGTTTTGATTTTCCAC 58.168 37.500 0.00 0.00 0.00 4.02
4166 4933 5.594317 AGTAGCTGTGTTTTGATTTTCCACT 59.406 36.000 0.00 0.00 0.00 4.00
4167 4934 5.343307 AGCTGTGTTTTGATTTTCCACTT 57.657 34.783 0.00 0.00 0.00 3.16
4168 4935 5.111293 AGCTGTGTTTTGATTTTCCACTTG 58.889 37.500 0.00 0.00 0.00 3.16
4169 4936 5.105392 AGCTGTGTTTTGATTTTCCACTTGA 60.105 36.000 0.00 0.00 0.00 3.02
4170 4937 5.580297 GCTGTGTTTTGATTTTCCACTTGAA 59.420 36.000 0.00 0.00 0.00 2.69
4171 4938 6.091986 GCTGTGTTTTGATTTTCCACTTGAAA 59.908 34.615 0.00 0.00 41.18 2.69
4172 4939 7.201635 GCTGTGTTTTGATTTTCCACTTGAAAT 60.202 33.333 0.00 0.00 42.38 2.17
4173 4940 8.558973 TGTGTTTTGATTTTCCACTTGAAATT 57.441 26.923 0.00 0.00 42.38 1.82
4174 4941 9.007901 TGTGTTTTGATTTTCCACTTGAAATTT 57.992 25.926 0.00 0.00 42.38 1.82
4175 4942 9.838975 GTGTTTTGATTTTCCACTTGAAATTTT 57.161 25.926 0.00 0.00 42.38 1.82
4176 4943 9.837525 TGTTTTGATTTTCCACTTGAAATTTTG 57.162 25.926 0.00 0.00 42.38 2.44
4177 4944 9.838975 GTTTTGATTTTCCACTTGAAATTTTGT 57.161 25.926 0.00 0.00 42.38 2.83
4178 4945 9.837525 TTTTGATTTTCCACTTGAAATTTTGTG 57.162 25.926 10.83 10.83 42.38 3.33
4179 4946 8.783833 TTGATTTTCCACTTGAAATTTTGTGA 57.216 26.923 16.31 5.42 42.38 3.58
4180 4947 8.783833 TGATTTTCCACTTGAAATTTTGTGAA 57.216 26.923 16.31 7.64 42.38 3.18
4181 4948 9.224267 TGATTTTCCACTTGAAATTTTGTGAAA 57.776 25.926 16.31 11.84 42.38 2.69
4184 4951 9.447157 TTTTCCACTTGAAATTTTGTGAAATCT 57.553 25.926 16.31 0.00 42.38 2.40
4186 4953 9.528018 TTCCACTTGAAATTTTGTGAAATCTAC 57.472 29.630 16.31 0.00 34.44 2.59
4187 4954 8.690884 TCCACTTGAAATTTTGTGAAATCTACA 58.309 29.630 16.31 0.00 34.44 2.74
4188 4955 9.480053 CCACTTGAAATTTTGTGAAATCTACAT 57.520 29.630 16.31 0.00 34.44 2.29
4208 4975 9.836864 TCTACATTAATATTGTCTGAATGTGCT 57.163 29.630 17.85 1.47 40.14 4.40
4211 4978 9.394767 ACATTAATATTGTCTGAATGTGCTACA 57.605 29.630 11.12 0.00 38.85 2.74
4252 5019 9.552114 TTTCAAACATTTAAAATGTGCAACTTG 57.448 25.926 0.00 0.00 38.04 3.16
4253 5020 8.484641 TCAAACATTTAAAATGTGCAACTTGA 57.515 26.923 0.00 0.00 38.04 3.02
4254 5021 8.602328 TCAAACATTTAAAATGTGCAACTTGAG 58.398 29.630 0.00 0.00 38.04 3.02
4255 5022 8.389603 CAAACATTTAAAATGTGCAACTTGAGT 58.610 29.630 0.00 0.00 38.04 3.41
4256 5023 8.491331 AACATTTAAAATGTGCAACTTGAGTT 57.509 26.923 0.00 0.00 38.04 3.01
4257 5024 8.130307 ACATTTAAAATGTGCAACTTGAGTTC 57.870 30.769 0.00 0.00 38.04 3.01
4258 5025 6.804534 TTTAAAATGTGCAACTTGAGTTCG 57.195 33.333 0.00 0.00 38.04 3.95
4259 5026 3.354089 AAATGTGCAACTTGAGTTCGG 57.646 42.857 0.00 0.00 38.04 4.30
4260 5027 1.967319 ATGTGCAACTTGAGTTCGGT 58.033 45.000 0.00 0.00 38.04 4.69
4261 5028 1.013596 TGTGCAACTTGAGTTCGGTG 58.986 50.000 0.00 0.00 38.04 4.94
4262 5029 0.317020 GTGCAACTTGAGTTCGGTGC 60.317 55.000 0.00 0.00 35.83 5.01
4263 5030 0.746204 TGCAACTTGAGTTCGGTGCA 60.746 50.000 0.00 0.00 35.83 4.57
4264 5031 0.317020 GCAACTTGAGTTCGGTGCAC 60.317 55.000 8.80 8.80 35.83 4.57
4265 5032 0.307760 CAACTTGAGTTCGGTGCACC 59.692 55.000 26.78 26.78 35.83 5.01
4277 5044 3.551407 TGCACCGGTAGCACCACA 61.551 61.111 22.47 5.12 38.47 4.17
4278 5045 2.281208 GCACCGGTAGCACCACAA 60.281 61.111 19.85 0.00 38.47 3.33
4279 5046 2.325082 GCACCGGTAGCACCACAAG 61.325 63.158 19.85 0.99 38.47 3.16
4280 5047 2.032071 ACCGGTAGCACCACAAGC 59.968 61.111 4.49 0.00 38.47 4.01
4281 5048 2.031919 CCGGTAGCACCACAAGCA 59.968 61.111 0.00 0.00 38.47 3.91
4282 5049 2.325082 CCGGTAGCACCACAAGCAC 61.325 63.158 0.00 0.00 38.47 4.40
4283 5050 2.325082 CGGTAGCACCACAAGCACC 61.325 63.158 6.21 0.00 38.47 5.01
4284 5051 1.228124 GGTAGCACCACAAGCACCA 60.228 57.895 1.01 0.00 38.42 4.17
4285 5052 1.237285 GGTAGCACCACAAGCACCAG 61.237 60.000 1.01 0.00 38.42 4.00
4286 5053 0.535102 GTAGCACCACAAGCACCAGT 60.535 55.000 0.00 0.00 0.00 4.00
4287 5054 0.534877 TAGCACCACAAGCACCAGTG 60.535 55.000 0.00 0.00 35.56 3.66
4300 5067 3.272574 CACCAGTGCACCAGATATTCT 57.727 47.619 14.63 0.00 0.00 2.40
4301 5068 3.201290 CACCAGTGCACCAGATATTCTC 58.799 50.000 14.63 0.00 0.00 2.87
4302 5069 2.171448 ACCAGTGCACCAGATATTCTCC 59.829 50.000 14.63 0.00 0.00 3.71
4303 5070 2.486191 CCAGTGCACCAGATATTCTCCC 60.486 54.545 14.63 0.00 0.00 4.30
4304 5071 1.414181 AGTGCACCAGATATTCTCCCG 59.586 52.381 14.63 0.00 0.00 5.14
4305 5072 0.758734 TGCACCAGATATTCTCCCGG 59.241 55.000 0.00 0.00 0.00 5.73
4306 5073 0.035458 GCACCAGATATTCTCCCGGG 59.965 60.000 16.85 16.85 0.00 5.73
4307 5074 0.035458 CACCAGATATTCTCCCGGGC 59.965 60.000 18.49 0.00 0.00 6.13
4308 5075 0.104934 ACCAGATATTCTCCCGGGCT 60.105 55.000 18.49 1.17 0.00 5.19
4309 5076 0.322975 CCAGATATTCTCCCGGGCTG 59.677 60.000 18.49 15.34 0.00 4.85
4310 5077 0.321122 CAGATATTCTCCCGGGCTGC 60.321 60.000 18.49 0.00 0.00 5.25
4311 5078 0.764369 AGATATTCTCCCGGGCTGCA 60.764 55.000 18.49 1.10 0.00 4.41
4312 5079 0.321122 GATATTCTCCCGGGCTGCAG 60.321 60.000 18.49 10.11 0.00 4.41
4313 5080 1.772819 ATATTCTCCCGGGCTGCAGG 61.773 60.000 18.49 4.04 0.00 4.85
4364 5131 0.674895 ATGTCTTTCCTCTGCGTGGC 60.675 55.000 0.00 0.00 0.00 5.01
4395 5162 1.483415 GTTGGGTAAGAGCGGGTATCA 59.517 52.381 0.00 0.00 0.00 2.15
4403 5170 1.689273 AGAGCGGGTATCATTCTGTCC 59.311 52.381 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.011125 TGCAGAGAAATATACTAGTGGAGGC 59.989 44.000 5.39 0.00 0.00 4.70
1 2 6.040955 TGTGCAGAGAAATATACTAGTGGAGG 59.959 42.308 5.39 0.00 0.00 4.30
14 15 4.025040 TGAGGTGAATGTGCAGAGAAAT 57.975 40.909 0.00 0.00 0.00 2.17
110 111 0.975135 TGATTGGGTGGCATGGTTTG 59.025 50.000 0.00 0.00 0.00 2.93
114 115 0.615544 AACCTGATTGGGTGGCATGG 60.616 55.000 0.00 0.00 39.85 3.66
118 119 1.654023 GCGTAACCTGATTGGGTGGC 61.654 60.000 0.00 0.00 39.85 5.01
124 125 4.685169 AAAGACATGCGTAACCTGATTG 57.315 40.909 0.00 0.00 0.00 2.67
126 127 6.706270 CCTATAAAAGACATGCGTAACCTGAT 59.294 38.462 0.00 0.00 0.00 2.90
130 131 4.514066 CCCCTATAAAAGACATGCGTAACC 59.486 45.833 0.00 0.00 0.00 2.85
133 134 3.968649 TCCCCCTATAAAAGACATGCGTA 59.031 43.478 0.00 0.00 0.00 4.42
147 148 5.638133 CATTCATGACTTGATTCCCCCTAT 58.362 41.667 0.00 0.00 33.34 2.57
148 149 4.689705 GCATTCATGACTTGATTCCCCCTA 60.690 45.833 8.65 0.00 33.34 3.53
149 150 3.907221 CATTCATGACTTGATTCCCCCT 58.093 45.455 0.00 0.00 33.34 4.79
224 225 4.498682 GCTCCAACTTTCCATGACATATGC 60.499 45.833 1.58 0.00 0.00 3.14
225 226 4.641541 TGCTCCAACTTTCCATGACATATG 59.358 41.667 0.00 0.00 0.00 1.78
240 241 9.918630 AGCATGAATTATATATTTTGCTCCAAC 57.081 29.630 0.00 0.00 34.27 3.77
255 256 5.347620 ACACAATGGCAAGCATGAATTAT 57.652 34.783 0.00 0.00 0.00 1.28
258 259 3.688694 AACACAATGGCAAGCATGAAT 57.311 38.095 0.00 0.00 0.00 2.57
331 332 9.010029 TGTTTGGGCTTTACATTTTTAAAACAA 57.990 25.926 0.00 0.00 32.59 2.83
332 333 8.451748 GTGTTTGGGCTTTACATTTTTAAAACA 58.548 29.630 0.00 0.00 32.96 2.83
333 334 8.451748 TGTGTTTGGGCTTTACATTTTTAAAAC 58.548 29.630 0.00 0.00 0.00 2.43
334 335 8.451748 GTGTGTTTGGGCTTTACATTTTTAAAA 58.548 29.630 0.00 0.00 0.00 1.52
338 339 5.739959 AGTGTGTTTGGGCTTTACATTTTT 58.260 33.333 0.00 0.00 0.00 1.94
339 340 5.351948 AGTGTGTTTGGGCTTTACATTTT 57.648 34.783 0.00 0.00 0.00 1.82
349 350 1.598601 CAAATGCAAGTGTGTTTGGGC 59.401 47.619 0.00 0.00 0.00 5.36
352 353 5.106791 TGGAAAACAAATGCAAGTGTGTTTG 60.107 36.000 16.32 12.03 41.94 2.93
353 354 4.999950 TGGAAAACAAATGCAAGTGTGTTT 59.000 33.333 9.29 10.80 44.01 2.83
359 360 5.857268 AGCTAATGGAAAACAAATGCAAGT 58.143 33.333 0.00 0.00 0.00 3.16
405 407 7.388500 CAGGAACCACATTAAAAGAAATGCATT 59.612 33.333 5.99 5.99 39.93 3.56
412 414 4.497473 CGCAGGAACCACATTAAAAGAA 57.503 40.909 0.00 0.00 0.00 2.52
438 440 1.521764 ACTGGATGATGCCCCACATA 58.478 50.000 0.00 0.00 39.84 2.29
439 441 0.632835 AACTGGATGATGCCCCACAT 59.367 50.000 0.00 0.00 43.54 3.21
441 443 0.034186 TGAACTGGATGATGCCCCAC 60.034 55.000 0.00 0.00 0.00 4.61
442 444 0.703488 TTGAACTGGATGATGCCCCA 59.297 50.000 0.00 0.00 0.00 4.96
443 445 1.753073 CTTTGAACTGGATGATGCCCC 59.247 52.381 0.00 0.00 0.00 5.80
444 446 2.726821 TCTTTGAACTGGATGATGCCC 58.273 47.619 0.00 0.00 0.00 5.36
445 447 4.789012 TTTCTTTGAACTGGATGATGCC 57.211 40.909 0.00 0.00 0.00 4.40
446 448 7.437267 CCAATATTTCTTTGAACTGGATGATGC 59.563 37.037 0.00 0.00 0.00 3.91
447 449 7.924412 CCCAATATTTCTTTGAACTGGATGATG 59.076 37.037 0.00 0.00 0.00 3.07
448 450 7.070322 CCCCAATATTTCTTTGAACTGGATGAT 59.930 37.037 0.00 0.00 0.00 2.45
449 451 6.380846 CCCCAATATTTCTTTGAACTGGATGA 59.619 38.462 0.00 0.00 0.00 2.92
450 452 6.407299 CCCCCAATATTTCTTTGAACTGGATG 60.407 42.308 0.00 0.00 0.00 3.51
451 453 5.662657 CCCCCAATATTTCTTTGAACTGGAT 59.337 40.000 0.00 0.00 0.00 3.41
452 454 5.022787 CCCCCAATATTTCTTTGAACTGGA 58.977 41.667 0.00 0.00 0.00 3.86
453 455 4.383010 GCCCCCAATATTTCTTTGAACTGG 60.383 45.833 0.00 0.00 0.00 4.00
454 456 4.467438 AGCCCCCAATATTTCTTTGAACTG 59.533 41.667 0.00 0.00 0.00 3.16
455 457 4.687976 AGCCCCCAATATTTCTTTGAACT 58.312 39.130 0.00 0.00 0.00 3.01
456 458 5.178061 CAAGCCCCCAATATTTCTTTGAAC 58.822 41.667 0.00 0.00 0.00 3.18
457 459 4.224818 CCAAGCCCCCAATATTTCTTTGAA 59.775 41.667 0.00 0.00 0.00 2.69
458 460 3.774216 CCAAGCCCCCAATATTTCTTTGA 59.226 43.478 0.00 0.00 0.00 2.69
459 461 3.118298 CCCAAGCCCCCAATATTTCTTTG 60.118 47.826 0.00 0.00 0.00 2.77
460 462 3.114606 CCCAAGCCCCCAATATTTCTTT 58.885 45.455 0.00 0.00 0.00 2.52
461 463 2.045745 ACCCAAGCCCCCAATATTTCTT 59.954 45.455 0.00 0.00 0.00 2.52
462 464 1.651235 ACCCAAGCCCCCAATATTTCT 59.349 47.619 0.00 0.00 0.00 2.52
463 465 2.174685 ACCCAAGCCCCCAATATTTC 57.825 50.000 0.00 0.00 0.00 2.17
464 466 2.590137 ACTACCCAAGCCCCCAATATTT 59.410 45.455 0.00 0.00 0.00 1.40
465 467 2.091333 CACTACCCAAGCCCCCAATATT 60.091 50.000 0.00 0.00 0.00 1.28
466 468 1.499007 CACTACCCAAGCCCCCAATAT 59.501 52.381 0.00 0.00 0.00 1.28
467 469 0.923358 CACTACCCAAGCCCCCAATA 59.077 55.000 0.00 0.00 0.00 1.90
468 470 0.849094 TCACTACCCAAGCCCCCAAT 60.849 55.000 0.00 0.00 0.00 3.16
469 471 0.849094 ATCACTACCCAAGCCCCCAA 60.849 55.000 0.00 0.00 0.00 4.12
470 472 0.045008 TATCACTACCCAAGCCCCCA 59.955 55.000 0.00 0.00 0.00 4.96
471 473 1.073923 CATATCACTACCCAAGCCCCC 59.926 57.143 0.00 0.00 0.00 5.40
472 474 2.039084 CTCATATCACTACCCAAGCCCC 59.961 54.545 0.00 0.00 0.00 5.80
473 475 2.551071 GCTCATATCACTACCCAAGCCC 60.551 54.545 0.00 0.00 0.00 5.19
474 476 2.370189 AGCTCATATCACTACCCAAGCC 59.630 50.000 0.00 0.00 0.00 4.35
475 477 3.070159 TGAGCTCATATCACTACCCAAGC 59.930 47.826 13.74 0.00 0.00 4.01
476 478 4.944619 TGAGCTCATATCACTACCCAAG 57.055 45.455 13.74 0.00 0.00 3.61
477 479 5.894298 AATGAGCTCATATCACTACCCAA 57.106 39.130 28.92 0.00 35.10 4.12
478 480 7.559335 AATAATGAGCTCATATCACTACCCA 57.441 36.000 28.92 5.51 35.10 4.51
479 481 8.725148 CAAAATAATGAGCTCATATCACTACCC 58.275 37.037 28.92 0.00 35.10 3.69
480 482 8.725148 CCAAAATAATGAGCTCATATCACTACC 58.275 37.037 28.92 0.00 35.10 3.18
500 502 8.203485 TGAGAGAAAAATAAGCACAACCAAAAT 58.797 29.630 0.00 0.00 0.00 1.82
505 507 5.631096 GCTTGAGAGAAAAATAAGCACAACC 59.369 40.000 0.00 0.00 42.35 3.77
677 679 2.754552 TGAACCATGCAATTAGAGGTGC 59.245 45.455 0.00 0.00 41.29 5.01
691 693 2.838202 ACCTAACACTCGGATGAACCAT 59.162 45.455 0.00 0.00 38.90 3.55
746 748 9.618890 CCCATATAGACCACATTTTATCTATGG 57.381 37.037 0.00 0.00 35.61 2.74
759 761 7.817418 TTTTTATCTTGCCCATATAGACCAC 57.183 36.000 0.00 0.00 0.00 4.16
825 827 3.730715 CCTGAAATCAGTTTGCAAACGAC 59.269 43.478 30.90 19.91 43.51 4.34
896 898 2.282462 AAGGCAGGAGGTTTGCGG 60.282 61.111 0.00 0.00 42.42 5.69
910 912 1.026718 GCGGATCACAGGGAACAAGG 61.027 60.000 0.00 0.00 0.00 3.61
918 920 2.892425 GCTTCGGCGGATCACAGG 60.892 66.667 7.21 0.00 0.00 4.00
928 930 3.808656 GCTGGCTCTTGCTTCGGC 61.809 66.667 0.00 0.00 39.59 5.54
931 933 1.237285 TTTCGGCTGGCTCTTGCTTC 61.237 55.000 0.00 0.00 39.59 3.86
954 956 3.242867 AGTGATGAAACAGGGACAGAGA 58.757 45.455 0.00 0.00 0.00 3.10
1045 1047 2.742372 CGACTTGGACTTGCCCGG 60.742 66.667 0.00 0.00 34.97 5.73
1096 1098 4.765970 TGGGGAGGGCTGATGGCT 62.766 66.667 0.00 0.00 41.46 4.75
1210 1212 4.809496 ATGCGCTGAGGGCTTGGG 62.809 66.667 22.14 0.00 42.10 4.12
1253 1255 1.474320 CGGAGTGTGGTTGGTGAGAAA 60.474 52.381 0.00 0.00 0.00 2.52
1344 1346 8.230472 ACAGAAAAGAACTCACAATTCAGAAT 57.770 30.769 0.00 0.00 0.00 2.40
1473 1487 8.884124 AAAATAAAGAGAGAATTGGTCATGGA 57.116 30.769 0.00 0.00 0.00 3.41
1563 1590 2.159627 GCAAAGTGTCAGTTATCACCCG 59.840 50.000 0.00 0.00 35.45 5.28
1579 1606 5.403466 GTTTGCTACAATCCTTCTTGCAAAG 59.597 40.000 9.92 0.00 45.35 2.77
1809 1969 6.038161 TGCATAATTTATGAGGTTCCTTGTCG 59.962 38.462 18.46 0.00 38.45 4.35
1905 2065 2.021723 GCATCCGGTTAGGCCAAATGA 61.022 52.381 5.01 0.00 40.77 2.57
2130 2311 3.623510 GCAGAACGCCTAAGCTTTAGAAT 59.376 43.478 3.20 0.00 36.60 2.40
2279 2475 3.505680 TCGCCAAACAGAAATTGCATAGT 59.494 39.130 0.00 0.00 0.00 2.12
2285 2581 2.053627 GCACTCGCCAAACAGAAATTG 58.946 47.619 0.00 0.00 0.00 2.32
2291 2587 0.167470 CAGATGCACTCGCCAAACAG 59.833 55.000 0.00 0.00 37.32 3.16
2352 2649 7.683704 GCATCTTGGATGCTAAAAACATCAGAT 60.684 37.037 20.86 4.08 44.68 2.90
2353 2650 6.405065 GCATCTTGGATGCTAAAAACATCAGA 60.405 38.462 20.86 2.09 44.68 3.27
2354 2651 5.747197 GCATCTTGGATGCTAAAAACATCAG 59.253 40.000 20.86 0.00 44.68 2.90
2355 2652 5.653507 GCATCTTGGATGCTAAAAACATCA 58.346 37.500 20.86 0.00 44.68 3.07
2407 2706 5.598005 ACTCCTTGAATGTCCAAAAATCACA 59.402 36.000 0.00 0.00 0.00 3.58
2413 2712 5.395103 CCACAAACTCCTTGAATGTCCAAAA 60.395 40.000 0.00 0.00 38.50 2.44
2485 2784 2.038426 AGGCAAAAAGGGAAAAATCGGG 59.962 45.455 0.00 0.00 0.00 5.14
2495 2794 1.636003 AGGACCTCTAGGCAAAAAGGG 59.364 52.381 0.00 0.00 39.32 3.95
2497 2796 2.305927 TCCAGGACCTCTAGGCAAAAAG 59.694 50.000 0.00 0.00 39.32 2.27
2607 2913 9.190858 CGATGAACAATAAATTCACAAAAGGAA 57.809 29.630 0.00 0.00 38.84 3.36
2608 2914 7.812191 CCGATGAACAATAAATTCACAAAAGGA 59.188 33.333 0.00 0.00 38.84 3.36
2609 2915 7.063308 CCCGATGAACAATAAATTCACAAAAGG 59.937 37.037 0.00 0.00 38.84 3.11
2610 2916 7.598493 ACCCGATGAACAATAAATTCACAAAAG 59.402 33.333 0.00 0.00 38.84 2.27
2611 2917 7.383572 CACCCGATGAACAATAAATTCACAAAA 59.616 33.333 0.00 0.00 38.84 2.44
2612 2918 6.865726 CACCCGATGAACAATAAATTCACAAA 59.134 34.615 0.00 0.00 38.84 2.83
2613 2919 6.385843 CACCCGATGAACAATAAATTCACAA 58.614 36.000 0.00 0.00 38.84 3.33
2614 2920 5.621104 GCACCCGATGAACAATAAATTCACA 60.621 40.000 0.00 0.00 38.84 3.58
2615 2921 4.798387 GCACCCGATGAACAATAAATTCAC 59.202 41.667 0.00 0.00 38.84 3.18
2616 2922 4.460731 TGCACCCGATGAACAATAAATTCA 59.539 37.500 0.00 0.00 40.25 2.57
2617 2923 4.992688 TGCACCCGATGAACAATAAATTC 58.007 39.130 0.00 0.00 0.00 2.17
2618 2924 4.704540 TCTGCACCCGATGAACAATAAATT 59.295 37.500 0.00 0.00 0.00 1.82
2619 2925 4.269183 TCTGCACCCGATGAACAATAAAT 58.731 39.130 0.00 0.00 0.00 1.40
2620 2926 3.680490 TCTGCACCCGATGAACAATAAA 58.320 40.909 0.00 0.00 0.00 1.40
2624 2930 1.003003 TCATCTGCACCCGATGAACAA 59.997 47.619 13.16 0.00 42.97 2.83
2645 2951 2.311688 AATTAGCGTCTGAGCCCGGG 62.312 60.000 19.09 19.09 38.01 5.73
2648 2954 2.017752 GCAATTAGCGTCTGAGCCC 58.982 57.895 0.00 0.00 38.01 5.19
2694 3001 9.930693 AACGCTCTTATATTTCTTTATAGAGGG 57.069 33.333 0.00 0.00 38.95 4.30
2708 3015 8.444715 CGAGTAGTGATCTAAACGCTCTTATAT 58.555 37.037 0.00 0.00 0.00 0.86
2709 3016 7.654923 TCGAGTAGTGATCTAAACGCTCTTATA 59.345 37.037 0.00 0.00 32.00 0.98
2710 3017 6.482641 TCGAGTAGTGATCTAAACGCTCTTAT 59.517 38.462 0.00 0.00 32.00 1.73
2711 3018 5.814188 TCGAGTAGTGATCTAAACGCTCTTA 59.186 40.000 0.00 0.00 32.00 2.10
2712 3019 4.634883 TCGAGTAGTGATCTAAACGCTCTT 59.365 41.667 0.00 0.00 32.00 2.85
2713 3020 4.190001 TCGAGTAGTGATCTAAACGCTCT 58.810 43.478 0.00 0.00 32.00 4.09
2714 3021 4.034279 ACTCGAGTAGTGATCTAAACGCTC 59.966 45.833 18.46 0.00 36.93 5.03
2715 3022 3.940221 ACTCGAGTAGTGATCTAAACGCT 59.060 43.478 18.46 0.00 36.93 5.07
2716 3023 4.275838 ACTCGAGTAGTGATCTAAACGC 57.724 45.455 18.46 0.00 36.93 4.84
2728 3035 8.630180 AGAGCGTTTAGATCACTACTCGAGTAG 61.630 44.444 38.75 38.75 42.10 2.57
2729 3036 5.114780 AGCGTTTAGATCACTACTCGAGTA 58.885 41.667 23.34 23.34 35.64 2.59
2730 3037 3.940221 AGCGTTTAGATCACTACTCGAGT 59.060 43.478 23.66 23.66 39.82 4.18
2731 3038 4.271533 AGAGCGTTTAGATCACTACTCGAG 59.728 45.833 11.84 11.84 37.82 4.04
2732 3039 4.190001 AGAGCGTTTAGATCACTACTCGA 58.810 43.478 0.00 0.00 37.82 4.04
2733 3040 4.539509 AGAGCGTTTAGATCACTACTCG 57.460 45.455 0.00 0.00 37.82 4.18
2802 3109 0.179004 ATCACGCAACCCTCCACAAA 60.179 50.000 0.00 0.00 0.00 2.83
2807 3114 0.321653 AACAGATCACGCAACCCTCC 60.322 55.000 0.00 0.00 0.00 4.30
2817 3124 8.273780 AGAAGAATAATGGTTCAACAGATCAC 57.726 34.615 0.00 0.00 0.00 3.06
2964 3296 8.710835 TCATTTGTCTACGCTACATTTATTCA 57.289 30.769 0.00 0.00 0.00 2.57
3004 3338 5.596836 ATGGATTGTGTTGAAAGTTGTGT 57.403 34.783 0.00 0.00 0.00 3.72
3034 3369 4.562757 CCGTGACTCTGGATTTCTTGGTTA 60.563 45.833 0.00 0.00 0.00 2.85
3057 3392 6.076981 ACTTGCATAACTGGCTAAATATGC 57.923 37.500 15.60 15.60 46.75 3.14
3117 3472 4.574674 TTCACTCAGCTATGGAACCATT 57.425 40.909 11.68 0.00 37.82 3.16
3318 3683 6.801862 GCAATTTCCGCATATCCTACATAAAC 59.198 38.462 0.00 0.00 0.00 2.01
3399 4040 9.071276 ACTAGTGTTTCTTCATTCACATCAAAT 57.929 29.630 0.00 0.00 33.84 2.32
3484 4132 3.880047 TCGTATGACCAAGTTAGTGGG 57.120 47.619 0.00 0.00 43.56 4.61
3511 4159 1.614903 CTGGCATCCAACTGAAGCAAA 59.385 47.619 0.00 0.00 39.44 3.68
3592 4240 6.122277 ACAATCATCCATTAAGTACAGTGGG 58.878 40.000 0.00 0.00 32.58 4.61
3618 4266 4.545820 GTCTAGTATGACTGAGCGGAGCA 61.546 52.174 0.00 0.00 44.69 4.26
3622 4270 2.946329 AGTGTCTAGTATGACTGAGCGG 59.054 50.000 0.00 0.00 37.79 5.52
3639 4287 2.936498 GGTGCGCTTCATGTTATAGTGT 59.064 45.455 9.73 0.00 0.00 3.55
3645 4293 6.288294 AGATTAATAGGTGCGCTTCATGTTA 58.712 36.000 9.73 5.99 0.00 2.41
3661 4309 6.489361 GGGACGGAGAGAGTACAAGATTAATA 59.511 42.308 0.00 0.00 0.00 0.98
3662 4310 5.302313 GGGACGGAGAGAGTACAAGATTAAT 59.698 44.000 0.00 0.00 0.00 1.40
3682 4330 0.172803 AGCGTCTCACATTACGGGAC 59.827 55.000 0.00 0.00 39.46 4.46
3683 4331 0.892755 AAGCGTCTCACATTACGGGA 59.107 50.000 0.00 0.00 39.46 5.14
3684 4332 1.722011 AAAGCGTCTCACATTACGGG 58.278 50.000 0.00 0.00 39.46 5.28
3685 4333 3.508762 AGTAAAGCGTCTCACATTACGG 58.491 45.455 0.00 0.00 39.46 4.02
3686 4334 3.546670 GGAGTAAAGCGTCTCACATTACG 59.453 47.826 0.00 0.00 41.92 3.18
3687 4335 4.745649 AGGAGTAAAGCGTCTCACATTAC 58.254 43.478 0.00 0.00 32.93 1.89
3688 4336 6.710597 ATAGGAGTAAAGCGTCTCACATTA 57.289 37.500 0.00 0.00 32.93 1.90
3690 4338 6.710597 TTATAGGAGTAAAGCGTCTCACAT 57.289 37.500 0.00 0.00 32.93 3.21
3692 4340 7.256286 TCTTTTATAGGAGTAAAGCGTCTCAC 58.744 38.462 0.00 0.00 32.93 3.51
3694 4342 7.921745 ACATCTTTTATAGGAGTAAAGCGTCTC 59.078 37.037 0.00 0.00 0.00 3.36
3695 4343 7.783042 ACATCTTTTATAGGAGTAAAGCGTCT 58.217 34.615 0.00 0.00 0.00 4.18
3698 4346 8.197988 ACAACATCTTTTATAGGAGTAAAGCG 57.802 34.615 0.00 0.00 0.00 4.68
3715 4436 2.688958 GGAGGCGAGTACTACAACATCT 59.311 50.000 0.00 0.00 0.00 2.90
3751 4472 2.048127 GCAGGGGACACTCACGAC 60.048 66.667 0.00 0.00 0.00 4.34
3758 4479 3.050275 GAACAGCGCAGGGGACAC 61.050 66.667 11.47 0.00 0.00 3.67
3764 4485 2.125552 TGGATCGAACAGCGCAGG 60.126 61.111 11.47 3.29 40.61 4.85
3765 4486 2.792290 CGTGGATCGAACAGCGCAG 61.792 63.158 11.47 3.33 42.86 5.18
3771 4492 1.731613 GACACGCGTGGATCGAACA 60.732 57.895 39.21 0.00 42.86 3.18
3775 4496 3.071459 GCAAGACACGCGTGGATCG 62.071 63.158 39.21 25.90 43.12 3.69
3818 4585 1.144057 GCCCATGAAGATCGGACGT 59.856 57.895 0.00 0.00 0.00 4.34
3823 4590 2.208431 GAGAAGTGCCCATGAAGATCG 58.792 52.381 0.00 0.00 0.00 3.69
3837 4604 2.932234 CGTCGGCTGGGTGAGAAGT 61.932 63.158 0.00 0.00 0.00 3.01
3845 4612 2.742372 CCAAGAACGTCGGCTGGG 60.742 66.667 0.00 0.00 0.00 4.45
3849 4616 2.741211 GACCCCAAGAACGTCGGC 60.741 66.667 0.00 0.00 0.00 5.54
3853 4620 0.036306 GTCATGGACCCCAAGAACGT 59.964 55.000 0.00 0.00 36.95 3.99
3857 4624 2.297895 CCCGTCATGGACCCCAAGA 61.298 63.158 0.00 0.00 42.00 3.02
3860 4627 3.326578 CACCCGTCATGGACCCCA 61.327 66.667 0.00 0.00 42.00 4.96
3893 4660 1.743995 GTGTGGGTGCACCGGATAC 60.744 63.158 29.08 22.91 44.64 2.24
3894 4661 1.485294 AAGTGTGGGTGCACCGGATA 61.485 55.000 29.08 13.90 44.64 2.59
3896 4663 1.485294 ATAAGTGTGGGTGCACCGGA 61.485 55.000 29.08 15.83 44.64 5.14
3897 4664 1.002624 ATAAGTGTGGGTGCACCGG 60.003 57.895 29.08 0.00 44.64 5.28
3898 4665 1.305219 CCATAAGTGTGGGTGCACCG 61.305 60.000 29.08 11.94 44.64 4.94
3899 4666 0.251165 ACCATAAGTGTGGGTGCACC 60.251 55.000 28.57 28.57 43.77 5.01
3900 4667 0.881118 CACCATAAGTGTGGGTGCAC 59.119 55.000 8.80 8.80 44.84 4.57
3901 4668 3.337834 CACCATAAGTGTGGGTGCA 57.662 52.632 0.00 0.00 44.84 4.57
3910 4677 0.107848 GCACCGGTAGCACCATAAGT 60.108 55.000 19.85 0.00 38.47 2.24
3911 4678 0.107897 TGCACCGGTAGCACCATAAG 60.108 55.000 22.47 2.59 38.47 1.73
3912 4679 1.984020 TGCACCGGTAGCACCATAA 59.016 52.632 22.47 4.51 38.47 1.90
3913 4680 3.715015 TGCACCGGTAGCACCATA 58.285 55.556 22.47 5.12 38.47 2.74
3924 4691 4.994317 ATGTATGACATCCGGTGCACCG 62.994 54.545 44.04 44.04 43.80 4.94
3925 4692 0.107897 TGTATGACATCCGGTGCACC 60.108 55.000 26.78 26.78 0.00 5.01
3926 4693 1.867233 GATGTATGACATCCGGTGCAC 59.133 52.381 8.80 8.80 46.99 4.57
3927 4694 2.238942 GATGTATGACATCCGGTGCA 57.761 50.000 0.00 2.80 46.99 4.57
3963 4730 8.603181 GTGTTTTGTCAATGTGCTAGAATTTTT 58.397 29.630 0.00 0.00 0.00 1.94
3964 4731 7.224557 GGTGTTTTGTCAATGTGCTAGAATTTT 59.775 33.333 0.00 0.00 0.00 1.82
3965 4732 6.701400 GGTGTTTTGTCAATGTGCTAGAATTT 59.299 34.615 0.00 0.00 0.00 1.82
3966 4733 6.183360 TGGTGTTTTGTCAATGTGCTAGAATT 60.183 34.615 0.00 0.00 0.00 2.17
3967 4734 5.301551 TGGTGTTTTGTCAATGTGCTAGAAT 59.698 36.000 0.00 0.00 0.00 2.40
3968 4735 4.642437 TGGTGTTTTGTCAATGTGCTAGAA 59.358 37.500 0.00 0.00 0.00 2.10
3969 4736 4.203226 TGGTGTTTTGTCAATGTGCTAGA 58.797 39.130 0.00 0.00 0.00 2.43
3970 4737 4.566545 TGGTGTTTTGTCAATGTGCTAG 57.433 40.909 0.00 0.00 0.00 3.42
3971 4738 4.991153 TTGGTGTTTTGTCAATGTGCTA 57.009 36.364 0.00 0.00 0.00 3.49
3972 4739 3.883830 TTGGTGTTTTGTCAATGTGCT 57.116 38.095 0.00 0.00 0.00 4.40
3973 4740 4.455917 CATTGGTGTTTTGTCAATGTGC 57.544 40.909 0.00 0.00 41.39 4.57
3977 4744 8.050778 ACGATATACATTGGTGTTTTGTCAAT 57.949 30.769 0.00 0.00 39.77 2.57
3978 4745 7.173390 TGACGATATACATTGGTGTTTTGTCAA 59.827 33.333 0.00 0.00 39.77 3.18
3979 4746 6.651225 TGACGATATACATTGGTGTTTTGTCA 59.349 34.615 0.00 0.00 39.77 3.58
3980 4747 6.959311 GTGACGATATACATTGGTGTTTTGTC 59.041 38.462 0.00 0.00 39.77 3.18
3981 4748 6.428465 TGTGACGATATACATTGGTGTTTTGT 59.572 34.615 0.00 0.00 39.77 2.83
3982 4749 6.836953 TGTGACGATATACATTGGTGTTTTG 58.163 36.000 0.00 0.00 39.77 2.44
3983 4750 7.441890 TTGTGACGATATACATTGGTGTTTT 57.558 32.000 0.00 0.00 39.77 2.43
3984 4751 7.441890 TTTGTGACGATATACATTGGTGTTT 57.558 32.000 0.00 0.00 39.77 2.83
3985 4752 7.441890 TTTTGTGACGATATACATTGGTGTT 57.558 32.000 0.00 0.00 39.77 3.32
3986 4753 7.624360 ATTTTGTGACGATATACATTGGTGT 57.376 32.000 0.00 0.00 42.39 4.16
3987 4754 8.909708 AAATTTTGTGACGATATACATTGGTG 57.090 30.769 0.00 0.00 0.00 4.17
3988 4755 7.908082 CGAAATTTTGTGACGATATACATTGGT 59.092 33.333 0.00 0.00 0.00 3.67
3989 4756 7.908082 ACGAAATTTTGTGACGATATACATTGG 59.092 33.333 10.38 0.00 0.00 3.16
3990 4757 8.820628 ACGAAATTTTGTGACGATATACATTG 57.179 30.769 10.38 0.00 0.00 2.82
4000 4767 9.638359 CGAATTTTTATACGAAATTTTGTGACG 57.362 29.630 19.51 7.87 36.96 4.35
4056 4823 9.860650 TGGCCTATTATTACACTAATGTCAATT 57.139 29.630 3.32 0.00 40.48 2.32
4057 4824 9.860650 TTGGCCTATTATTACACTAATGTCAAT 57.139 29.630 3.32 0.00 40.48 2.57
4058 4825 9.688091 TTTGGCCTATTATTACACTAATGTCAA 57.312 29.630 3.32 0.00 40.48 3.18
4059 4826 9.860650 ATTTGGCCTATTATTACACTAATGTCA 57.139 29.630 3.32 0.00 40.48 3.58
4066 4833 9.067986 GCTTTAGATTTGGCCTATTATTACACT 57.932 33.333 3.32 0.00 0.00 3.55
4067 4834 8.297426 GGCTTTAGATTTGGCCTATTATTACAC 58.703 37.037 3.32 0.00 41.20 2.90
4068 4835 7.450323 GGGCTTTAGATTTGGCCTATTATTACA 59.550 37.037 3.32 0.00 43.62 2.41
4069 4836 7.450323 TGGGCTTTAGATTTGGCCTATTATTAC 59.550 37.037 3.32 0.00 45.25 1.89
4070 4837 7.531317 TGGGCTTTAGATTTGGCCTATTATTA 58.469 34.615 3.32 0.00 45.25 0.98
4071 4838 6.381250 TGGGCTTTAGATTTGGCCTATTATT 58.619 36.000 3.32 0.00 45.25 1.40
4072 4839 5.964288 TGGGCTTTAGATTTGGCCTATTAT 58.036 37.500 3.32 0.00 45.25 1.28
4073 4840 5.396057 TGGGCTTTAGATTTGGCCTATTA 57.604 39.130 3.32 0.00 45.25 0.98
4074 4841 4.264373 TGGGCTTTAGATTTGGCCTATT 57.736 40.909 3.32 0.00 45.25 1.73
4075 4842 3.960755 GTTGGGCTTTAGATTTGGCCTAT 59.039 43.478 3.32 0.00 45.25 2.57
4076 4843 3.011257 AGTTGGGCTTTAGATTTGGCCTA 59.989 43.478 3.32 0.00 45.25 3.93
4077 4844 2.179427 GTTGGGCTTTAGATTTGGCCT 58.821 47.619 3.32 0.00 45.25 5.19
4078 4845 2.179427 AGTTGGGCTTTAGATTTGGCC 58.821 47.619 0.00 0.00 45.24 5.36
4079 4846 3.961480 AAGTTGGGCTTTAGATTTGGC 57.039 42.857 0.00 0.00 32.57 4.52
4080 4847 6.530019 ACATAAGTTGGGCTTTAGATTTGG 57.470 37.500 0.00 0.00 38.57 3.28
4081 4848 9.520204 CATAACATAAGTTGGGCTTTAGATTTG 57.480 33.333 0.00 0.00 38.69 2.32
4082 4849 9.255029 ACATAACATAAGTTGGGCTTTAGATTT 57.745 29.630 0.00 0.00 38.69 2.17
4083 4850 8.823220 ACATAACATAAGTTGGGCTTTAGATT 57.177 30.769 0.00 0.00 38.69 2.40
4084 4851 9.338622 GTACATAACATAAGTTGGGCTTTAGAT 57.661 33.333 0.00 0.00 38.69 1.98
4085 4852 8.545472 AGTACATAACATAAGTTGGGCTTTAGA 58.455 33.333 0.00 0.00 38.69 2.10
4086 4853 8.732746 AGTACATAACATAAGTTGGGCTTTAG 57.267 34.615 0.00 0.00 38.69 1.85
4088 4855 9.695155 AATAGTACATAACATAAGTTGGGCTTT 57.305 29.630 0.00 0.00 38.69 3.51
4089 4856 9.338622 GAATAGTACATAACATAAGTTGGGCTT 57.661 33.333 0.00 0.00 38.69 4.35
4090 4857 8.491134 TGAATAGTACATAACATAAGTTGGGCT 58.509 33.333 0.00 0.00 38.69 5.19
4091 4858 8.671384 TGAATAGTACATAACATAAGTTGGGC 57.329 34.615 0.00 0.00 38.69 5.36
4092 4859 9.832445 ACTGAATAGTACATAACATAAGTTGGG 57.168 33.333 0.00 0.00 35.32 4.12
4113 4880 9.545105 AGCAAAAATGACAAATTCAATACTGAA 57.455 25.926 0.00 0.00 45.53 3.02
4114 4881 9.545105 AAGCAAAAATGACAAATTCAATACTGA 57.455 25.926 0.00 0.00 37.92 3.41
4138 4905 8.134895 TGGAAAATCAAAACACAGCTACTAAAG 58.865 33.333 0.00 0.00 0.00 1.85
4139 4906 7.918562 GTGGAAAATCAAAACACAGCTACTAAA 59.081 33.333 0.00 0.00 32.58 1.85
4140 4907 7.284489 AGTGGAAAATCAAAACACAGCTACTAA 59.716 33.333 0.00 0.00 34.65 2.24
4141 4908 6.770785 AGTGGAAAATCAAAACACAGCTACTA 59.229 34.615 0.00 0.00 34.65 1.82
4142 4909 5.594317 AGTGGAAAATCAAAACACAGCTACT 59.406 36.000 0.00 0.00 34.65 2.57
4143 4910 5.831997 AGTGGAAAATCAAAACACAGCTAC 58.168 37.500 0.00 0.00 34.65 3.58
4144 4911 6.096141 TCAAGTGGAAAATCAAAACACAGCTA 59.904 34.615 0.00 0.00 34.65 3.32
4145 4912 5.105392 TCAAGTGGAAAATCAAAACACAGCT 60.105 36.000 0.00 0.00 34.65 4.24
4146 4913 5.108517 TCAAGTGGAAAATCAAAACACAGC 58.891 37.500 0.00 0.00 34.65 4.40
4147 4914 7.593875 TTTCAAGTGGAAAATCAAAACACAG 57.406 32.000 0.00 0.00 42.37 3.66
4160 4927 9.528018 GTAGATTTCACAAAATTTCAAGTGGAA 57.472 29.630 11.98 11.98 35.21 3.53
4161 4928 8.690884 TGTAGATTTCACAAAATTTCAAGTGGA 58.309 29.630 14.53 6.82 35.21 4.02
4162 4929 8.870160 TGTAGATTTCACAAAATTTCAAGTGG 57.130 30.769 14.53 2.24 35.21 4.00
4182 4949 9.836864 AGCACATTCAGACAATATTAATGTAGA 57.163 29.630 11.40 0.00 38.39 2.59
4185 4952 9.394767 TGTAGCACATTCAGACAATATTAATGT 57.605 29.630 7.44 7.44 40.44 2.71
4226 4993 9.552114 CAAGTTGCACATTTTAAATGTTTGAAA 57.448 25.926 19.27 8.70 31.57 2.69
4227 4994 8.939929 TCAAGTTGCACATTTTAAATGTTTGAA 58.060 25.926 22.08 13.36 0.00 2.69
4228 4995 8.484641 TCAAGTTGCACATTTTAAATGTTTGA 57.515 26.923 21.19 21.19 0.00 2.69
4229 4996 8.389603 ACTCAAGTTGCACATTTTAAATGTTTG 58.610 29.630 19.27 18.82 0.00 2.93
4230 4997 8.491331 ACTCAAGTTGCACATTTTAAATGTTT 57.509 26.923 19.27 9.24 0.00 2.83
4231 4998 8.491331 AACTCAAGTTGCACATTTTAAATGTT 57.509 26.923 19.27 3.62 36.80 2.71
4232 4999 7.043458 CGAACTCAAGTTGCACATTTTAAATGT 60.043 33.333 16.57 16.57 38.56 2.71
4233 5000 7.275785 CGAACTCAAGTTGCACATTTTAAATG 58.724 34.615 15.25 15.25 38.56 2.32
4234 5001 6.420604 CCGAACTCAAGTTGCACATTTTAAAT 59.579 34.615 0.00 0.00 38.56 1.40
4235 5002 5.746245 CCGAACTCAAGTTGCACATTTTAAA 59.254 36.000 0.00 0.00 38.56 1.52
4236 5003 5.163602 ACCGAACTCAAGTTGCACATTTTAA 60.164 36.000 0.00 0.00 38.56 1.52
4237 5004 4.336993 ACCGAACTCAAGTTGCACATTTTA 59.663 37.500 0.00 0.00 38.56 1.52
4238 5005 3.130340 ACCGAACTCAAGTTGCACATTTT 59.870 39.130 0.00 0.00 38.56 1.82
4239 5006 2.687935 ACCGAACTCAAGTTGCACATTT 59.312 40.909 0.00 0.00 38.56 2.32
4240 5007 2.033299 CACCGAACTCAAGTTGCACATT 59.967 45.455 0.00 0.00 38.56 2.71
4241 5008 1.603802 CACCGAACTCAAGTTGCACAT 59.396 47.619 0.00 0.00 38.56 3.21
4242 5009 1.013596 CACCGAACTCAAGTTGCACA 58.986 50.000 0.00 0.00 38.56 4.57
4243 5010 0.317020 GCACCGAACTCAAGTTGCAC 60.317 55.000 0.00 0.00 38.56 4.57
4244 5011 0.746204 TGCACCGAACTCAAGTTGCA 60.746 50.000 0.00 1.73 38.56 4.08
4245 5012 0.317020 GTGCACCGAACTCAAGTTGC 60.317 55.000 5.22 0.00 38.56 4.17
4246 5013 0.307760 GGTGCACCGAACTCAAGTTG 59.692 55.000 22.49 0.00 38.56 3.16
4247 5014 2.702847 GGTGCACCGAACTCAAGTT 58.297 52.632 22.49 0.00 41.64 2.66
4248 5015 4.456806 GGTGCACCGAACTCAAGT 57.543 55.556 22.49 0.00 0.00 3.16
4260 5027 3.108288 TTGTGGTGCTACCGGTGCA 62.108 57.895 19.93 21.51 42.58 4.57
4261 5028 2.281208 TTGTGGTGCTACCGGTGC 60.281 61.111 19.93 19.04 42.58 5.01
4262 5029 2.325082 GCTTGTGGTGCTACCGGTG 61.325 63.158 19.93 8.61 42.58 4.94
4263 5030 2.032071 GCTTGTGGTGCTACCGGT 59.968 61.111 13.98 13.98 42.58 5.28
4264 5031 2.031919 TGCTTGTGGTGCTACCGG 59.968 61.111 0.00 0.00 42.58 5.28
4265 5032 2.325082 GGTGCTTGTGGTGCTACCG 61.325 63.158 0.00 0.00 42.58 4.02
4266 5033 1.228124 TGGTGCTTGTGGTGCTACC 60.228 57.895 0.00 0.00 39.22 3.18
4267 5034 0.535102 ACTGGTGCTTGTGGTGCTAC 60.535 55.000 0.00 0.00 0.00 3.58
4268 5035 0.534877 CACTGGTGCTTGTGGTGCTA 60.535 55.000 0.00 0.00 0.00 3.49
4269 5036 1.825191 CACTGGTGCTTGTGGTGCT 60.825 57.895 0.00 0.00 0.00 4.40
4270 5037 2.723746 CACTGGTGCTTGTGGTGC 59.276 61.111 0.00 0.00 0.00 5.01
4280 5047 3.201290 GAGAATATCTGGTGCACTGGTG 58.799 50.000 17.98 4.79 0.00 4.17
4281 5048 2.171448 GGAGAATATCTGGTGCACTGGT 59.829 50.000 17.98 9.01 0.00 4.00
4282 5049 2.486191 GGGAGAATATCTGGTGCACTGG 60.486 54.545 17.98 9.89 0.00 4.00
4283 5050 2.804572 CGGGAGAATATCTGGTGCACTG 60.805 54.545 17.98 10.30 0.00 3.66
4284 5051 1.414181 CGGGAGAATATCTGGTGCACT 59.586 52.381 17.98 0.00 0.00 4.40
4285 5052 1.541233 CCGGGAGAATATCTGGTGCAC 60.541 57.143 8.80 8.80 0.00 4.57
4286 5053 0.758734 CCGGGAGAATATCTGGTGCA 59.241 55.000 0.00 0.00 0.00 4.57
4287 5054 0.035458 CCCGGGAGAATATCTGGTGC 59.965 60.000 18.48 0.00 0.00 5.01
4288 5055 0.035458 GCCCGGGAGAATATCTGGTG 59.965 60.000 29.31 0.00 0.00 4.17
4289 5056 0.104934 AGCCCGGGAGAATATCTGGT 60.105 55.000 29.31 0.00 0.00 4.00
4290 5057 0.322975 CAGCCCGGGAGAATATCTGG 59.677 60.000 29.31 0.98 0.00 3.86
4291 5058 0.321122 GCAGCCCGGGAGAATATCTG 60.321 60.000 29.31 20.84 0.00 2.90
4292 5059 0.764369 TGCAGCCCGGGAGAATATCT 60.764 55.000 29.31 6.71 0.00 1.98
4293 5060 0.321122 CTGCAGCCCGGGAGAATATC 60.321 60.000 29.31 3.77 0.00 1.63
4294 5061 1.757306 CTGCAGCCCGGGAGAATAT 59.243 57.895 29.31 0.00 0.00 1.28
4295 5062 2.443394 CCTGCAGCCCGGGAGAATA 61.443 63.158 29.31 4.51 43.17 1.75
4296 5063 3.801997 CCTGCAGCCCGGGAGAAT 61.802 66.667 29.31 2.75 43.17 2.40
4318 5085 0.035176 CACAAAAATGTGGCCCCAGG 59.965 55.000 0.00 0.00 36.24 4.45
4319 5086 3.610637 CACAAAAATGTGGCCCCAG 57.389 52.632 0.00 0.00 36.24 4.45
4338 5105 5.403766 CACGCAGAGGAAAGACATGATATAC 59.596 44.000 0.00 0.00 0.00 1.47
4344 5111 1.081892 CCACGCAGAGGAAAGACATG 58.918 55.000 0.00 0.00 42.26 3.21
4364 5131 3.758554 CTCTTACCCAACACAGGAAATGG 59.241 47.826 0.00 0.00 0.00 3.16
4395 5162 2.045926 GCCCACGCAGGACAGAAT 60.046 61.111 0.00 0.00 41.22 2.40
4415 5182 1.208293 CCTAGTGGTGGAAAGAGGCTC 59.792 57.143 6.34 6.34 0.00 4.70
4417 5184 0.393132 GCCTAGTGGTGGAAAGAGGC 60.393 60.000 0.00 0.00 42.45 4.70
4420 5187 1.351017 CCAAGCCTAGTGGTGGAAAGA 59.649 52.381 0.00 0.00 32.79 2.52
4424 5191 4.989458 TCCAAGCCTAGTGGTGGA 57.011 55.556 2.25 2.25 36.50 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.