Multiple sequence alignment - TraesCS5A01G148700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G148700 chr5A 100.000 6734 0 0 1 6734 326283267 326290000 0.000000e+00 12436.0
1 TraesCS5A01G148700 chr5A 100.000 546 0 0 7089 7634 326290355 326290900 0.000000e+00 1009.0
2 TraesCS5A01G148700 chr5A 95.185 270 12 1 171 440 258038314 258038582 7.080000e-115 425.0
3 TraesCS5A01G148700 chr5A 96.471 170 5 1 2 171 258038444 258038276 5.830000e-71 279.0
4 TraesCS5A01G148700 chr5A 96.471 170 5 1 2 171 683122677 683122509 5.830000e-71 279.0
5 TraesCS5A01G148700 chr5B 96.235 3931 123 13 2812 6734 275359247 275363160 0.000000e+00 6416.0
6 TraesCS5A01G148700 chr5B 93.540 1517 62 13 1320 2813 275357671 275359174 0.000000e+00 2226.0
7 TraesCS5A01G148700 chr5B 88.249 834 34 22 449 1272 275356889 275357668 0.000000e+00 939.0
8 TraesCS5A01G148700 chr5B 93.607 219 11 1 7089 7304 275363456 275363674 2.660000e-84 324.0
9 TraesCS5A01G148700 chr5B 82.988 241 18 9 7385 7622 572401403 572401623 6.040000e-46 196.0
10 TraesCS5A01G148700 chr5D 95.955 3412 94 16 3356 6734 230416832 230413432 0.000000e+00 5496.0
11 TraesCS5A01G148700 chr5D 92.440 1164 48 21 443 1587 230421928 230420786 0.000000e+00 1626.0
12 TraesCS5A01G148700 chr5D 91.633 741 42 5 1573 2295 230419113 230418375 0.000000e+00 1007.0
13 TraesCS5A01G148700 chr5D 97.064 545 14 2 2813 3357 230417533 230416991 0.000000e+00 917.0
14 TraesCS5A01G148700 chr5D 94.516 547 25 4 2270 2813 230418151 230417607 0.000000e+00 839.0
15 TraesCS5A01G148700 chr5D 89.048 210 16 4 7171 7377 230413266 230413061 3.540000e-63 254.0
16 TraesCS5A01G148700 chr5D 86.192 239 20 5 7385 7622 371873688 371873462 5.920000e-61 246.0
17 TraesCS5A01G148700 chr5D 85.774 239 21 3 7385 7622 548401893 548402119 2.750000e-59 241.0
18 TraesCS5A01G148700 chr5D 84.255 235 24 4 7392 7625 534010966 534010744 4.640000e-52 217.0
19 TraesCS5A01G148700 chr5D 80.800 250 32 6 7385 7632 324595588 324595353 1.690000e-41 182.0
20 TraesCS5A01G148700 chr6B 93.993 283 15 2 171 452 638449425 638449144 1.970000e-115 427.0
21 TraesCS5A01G148700 chr6B 96.471 170 5 1 2 171 547713820 547713652 5.830000e-71 279.0
22 TraesCS5A01G148700 chr7A 95.149 268 13 0 171 438 616469957 616469690 2.550000e-114 424.0
23 TraesCS5A01G148700 chr7A 86.638 232 18 5 7392 7622 171578110 171577891 2.130000e-60 244.0
24 TraesCS5A01G148700 chr7A 81.600 125 23 0 6369 6493 74155834 74155958 3.770000e-18 104.0
25 TraesCS5A01G148700 chr6A 94.545 275 14 1 171 445 65071110 65071383 2.550000e-114 424.0
26 TraesCS5A01G148700 chr2A 95.167 269 12 1 171 439 18596955 18596688 2.550000e-114 424.0
27 TraesCS5A01G148700 chr2A 95.472 265 12 0 171 435 597847855 597848119 2.550000e-114 424.0
28 TraesCS5A01G148700 chr2A 94.485 272 15 0 171 442 771545665 771545936 3.290000e-113 420.0
29 TraesCS5A01G148700 chr1B 95.149 268 13 0 171 438 480414159 480413892 2.550000e-114 424.0
30 TraesCS5A01G148700 chr1B 96.471 170 5 1 2 171 480414029 480414197 5.830000e-71 279.0
31 TraesCS5A01G148700 chr1B 78.175 252 40 10 3216 3454 565664559 565664808 6.170000e-31 147.0
32 TraesCS5A01G148700 chr1A 95.167 269 12 1 171 439 382255964 382256231 2.550000e-114 424.0
33 TraesCS5A01G148700 chr1A 96.471 170 5 1 2 171 52706229 52706397 5.830000e-71 279.0
34 TraesCS5A01G148700 chr3A 97.059 170 4 1 2 171 676854237 676854069 1.250000e-72 285.0
35 TraesCS5A01G148700 chr3A 96.471 170 5 1 2 171 697523236 697523068 5.830000e-71 279.0
36 TraesCS5A01G148700 chr4B 96.471 170 5 1 2 171 484585648 484585480 5.830000e-71 279.0
37 TraesCS5A01G148700 chr4A 96.471 170 5 1 2 171 441499107 441499275 5.830000e-71 279.0
38 TraesCS5A01G148700 chrUn 86.638 232 18 5 7392 7622 248281224 248281443 2.130000e-60 244.0
39 TraesCS5A01G148700 chrUn 79.012 243 37 8 7391 7632 34366371 34366142 3.690000e-33 154.0
40 TraesCS5A01G148700 chrUn 78.400 250 38 7 7385 7632 38748391 38748156 1.720000e-31 148.0
41 TraesCS5A01G148700 chrUn 80.000 195 26 7 7385 7578 472632599 472632417 1.730000e-26 132.0
42 TraesCS5A01G148700 chr4D 84.519 239 24 3 7385 7622 505165578 505165804 2.770000e-54 224.0
43 TraesCS5A01G148700 chr4D 83.264 239 26 4 7385 7622 461556688 461556913 2.790000e-49 207.0
44 TraesCS5A01G148700 chr4D 80.672 238 32 4 7384 7621 44431063 44430840 1.020000e-38 172.0
45 TraesCS5A01G148700 chr1D 84.519 239 23 4 7385 7622 41866537 41866312 2.770000e-54 224.0
46 TraesCS5A01G148700 chr1D 82.083 240 28 7 7385 7622 336359926 336360152 2.810000e-44 191.0
47 TraesCS5A01G148700 chr1D 81.974 233 30 4 7385 7617 435803837 435804057 3.640000e-43 187.0
48 TraesCS5A01G148700 chr1D 80.769 234 32 5 7385 7617 315642480 315642259 3.660000e-38 171.0
49 TraesCS5A01G148700 chr3D 84.549 233 17 9 7385 7617 14198214 14198427 6.000000e-51 213.0
50 TraesCS5A01G148700 chr3D 82.041 245 31 5 7385 7627 25967509 25967276 6.040000e-46 196.0
51 TraesCS5A01G148700 chr3D 81.590 239 30 4 7385 7622 580987380 580987605 1.310000e-42 185.0
52 TraesCS5A01G148700 chr6D 82.083 240 28 7 7385 7622 276402874 276403100 2.810000e-44 191.0
53 TraesCS5A01G148700 chr2D 82.051 234 28 6 7385 7617 477398305 477398525 3.640000e-43 187.0
54 TraesCS5A01G148700 chr2D 81.590 239 30 8 7385 7622 560188875 560189100 1.310000e-42 185.0
55 TraesCS5A01G148700 chr2D 80.870 230 32 4 7384 7613 476954866 476954649 3.660000e-38 171.0
56 TraesCS5A01G148700 chr3B 87.333 150 13 2 7478 7625 777006774 777006919 4.740000e-37 167.0
57 TraesCS5A01G148700 chr2B 78.512 242 42 6 7385 7625 172838081 172838313 4.770000e-32 150.0
58 TraesCS5A01G148700 chr7D 84.000 125 20 0 6369 6493 66701155 66701031 3.740000e-23 121.0
59 TraesCS5A01G148700 chr7B 86.905 84 11 0 7385 7468 162921870 162921953 2.270000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G148700 chr5A 326283267 326290900 7633 False 6722.500000 12436 100.000000 1 7634 2 chr5A.!!$F2 7633
1 TraesCS5A01G148700 chr5B 275356889 275363674 6785 False 2476.250000 6416 92.907750 449 7304 4 chr5B.!!$F2 6855
2 TraesCS5A01G148700 chr5D 230413061 230421928 8867 True 1689.833333 5496 93.442667 443 7377 6 chr5D.!!$R4 6934

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
434 435 0.322906 CCTCTGAACCAAAGGAGGCC 60.323 60.000 0.00 0.0 38.82 5.19 F
435 436 0.322906 CTCTGAACCAAAGGAGGCCC 60.323 60.000 0.00 0.0 0.00 5.80 F
1211 1227 0.790814 CGTTTCGTTTCTGCCTCTCC 59.209 55.000 0.00 0.0 0.00 3.71 F
1509 1530 1.070289 ACGTCTTGTGGTTTCCTCCTC 59.930 52.381 0.00 0.0 0.00 3.71 F
2247 3983 1.027357 GCGATCAGGGCATTTGATGT 58.973 50.000 3.56 0.0 35.50 3.06 F
3169 5232 1.597742 CTCCACTGGAACACCAACTG 58.402 55.000 0.00 0.0 32.95 3.16 F
3929 6153 0.911769 TGGTAAGGTCAGCCCTGATG 59.088 55.000 0.77 0.0 45.47 3.07 F
4331 6555 1.980765 AGCAGTGGATGAGTTCCTTCA 59.019 47.619 0.00 0.0 45.68 3.02 F
5509 7734 2.183679 GAGTCTGTTCCTGAGATGGGT 58.816 52.381 0.00 0.0 0.00 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1608 3325 0.663153 ACGACAGAGCAAAACAAGGC 59.337 50.000 0.00 0.0 0.00 4.35 R
2063 3799 1.002468 CCGCCACAACAAAACTGAGAG 60.002 52.381 0.00 0.0 0.00 3.20 R
2202 3938 1.818060 GCACATACCTTGTTGATGCCA 59.182 47.619 0.00 0.0 36.00 4.92 R
2760 4747 2.634940 AGTGCAGAGGAATACACACAGT 59.365 45.455 0.00 0.0 35.47 3.55 R
3883 6107 3.005684 TCACGATGGCTTGAAGCAAAATT 59.994 39.130 19.89 0.0 44.75 1.82 R
5164 7388 1.752683 ACTCGCACTCTACCACCTAG 58.247 55.000 0.00 0.0 0.00 3.02 R
5787 8014 1.060698 GTAAGATGTGGAAACGAGCGC 59.939 52.381 0.00 0.0 0.00 5.92 R
5986 8213 1.523938 GCTGTGGAATACTCGGGGC 60.524 63.158 0.00 0.0 0.00 5.80 R
7439 9703 0.251354 GGGAGCTGCTCAGATGTTCA 59.749 55.000 28.95 0.0 31.08 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 7.929941 AGTCTAGACTCAATGGAAAAATTCC 57.070 36.000 20.00 2.12 43.52 3.01
48 49 7.694093 AGTCTAGACTCAATGGAAAAATTCCT 58.306 34.615 20.00 0.00 43.58 3.36
49 50 8.166726 AGTCTAGACTCAATGGAAAAATTCCTT 58.833 33.333 20.00 1.58 43.58 3.36
59 60 5.984233 GGAAAAATTCCTTTGGTGTCAAC 57.016 39.130 1.86 0.00 46.57 3.18
60 61 4.814234 GGAAAAATTCCTTTGGTGTCAACC 59.186 41.667 1.86 0.00 46.57 3.77
81 82 9.699410 TCAACCAAATGACATCTAATTTCCTAT 57.301 29.630 0.00 0.00 0.00 2.57
84 85 9.136323 ACCAAATGACATCTAATTTCCTATTCC 57.864 33.333 0.00 0.00 0.00 3.01
85 86 9.359653 CCAAATGACATCTAATTTCCTATTCCT 57.640 33.333 0.00 0.00 0.00 3.36
90 91 9.434275 TGACATCTAATTTCCTATTCCTACTCA 57.566 33.333 0.00 0.00 0.00 3.41
101 102 8.207350 TCCTATTCCTACTCATAAGATTTGGG 57.793 38.462 0.00 0.00 0.00 4.12
102 103 8.016652 TCCTATTCCTACTCATAAGATTTGGGA 58.983 37.037 0.00 0.00 0.00 4.37
103 104 8.830741 CCTATTCCTACTCATAAGATTTGGGAT 58.169 37.037 0.00 0.00 0.00 3.85
106 107 8.561536 TTCCTACTCATAAGATTTGGGATACA 57.438 34.615 0.00 0.00 39.74 2.29
107 108 8.742125 TCCTACTCATAAGATTTGGGATACAT 57.258 34.615 0.00 0.00 39.74 2.29
108 109 8.597167 TCCTACTCATAAGATTTGGGATACATG 58.403 37.037 0.00 0.00 39.74 3.21
109 110 8.378565 CCTACTCATAAGATTTGGGATACATGT 58.621 37.037 2.69 2.69 39.74 3.21
110 111 9.429359 CTACTCATAAGATTTGGGATACATGTC 57.571 37.037 0.00 0.00 39.74 3.06
111 112 7.805163 ACTCATAAGATTTGGGATACATGTCA 58.195 34.615 0.00 0.00 39.74 3.58
112 113 8.443176 ACTCATAAGATTTGGGATACATGTCAT 58.557 33.333 0.00 0.00 39.74 3.06
113 114 8.853077 TCATAAGATTTGGGATACATGTCATC 57.147 34.615 0.00 4.27 39.74 2.92
114 115 8.663167 TCATAAGATTTGGGATACATGTCATCT 58.337 33.333 0.00 0.00 39.74 2.90
115 116 8.944029 CATAAGATTTGGGATACATGTCATCTC 58.056 37.037 0.00 4.99 39.74 2.75
116 117 6.505048 AGATTTGGGATACATGTCATCTCA 57.495 37.500 0.00 7.65 39.74 3.27
117 118 7.087895 AGATTTGGGATACATGTCATCTCAT 57.912 36.000 0.00 0.00 32.99 2.90
118 119 7.524290 AGATTTGGGATACATGTCATCTCATT 58.476 34.615 0.00 1.98 32.99 2.57
119 120 8.003044 AGATTTGGGATACATGTCATCTCATTT 58.997 33.333 0.00 1.66 32.99 2.32
120 121 7.572523 TTTGGGATACATGTCATCTCATTTC 57.427 36.000 0.00 0.00 32.99 2.17
121 122 5.624159 TGGGATACATGTCATCTCATTTCC 58.376 41.667 0.00 1.31 39.74 3.13
122 123 5.370584 TGGGATACATGTCATCTCATTTCCT 59.629 40.000 0.00 0.00 39.74 3.36
123 124 6.558394 TGGGATACATGTCATCTCATTTCCTA 59.442 38.462 0.00 0.00 39.74 2.94
124 125 6.876257 GGGATACATGTCATCTCATTTCCTAC 59.124 42.308 0.00 0.00 39.74 3.18
125 126 7.445121 GGATACATGTCATCTCATTTCCTACA 58.555 38.462 0.00 0.00 0.00 2.74
126 127 7.933577 GGATACATGTCATCTCATTTCCTACAA 59.066 37.037 0.00 0.00 0.00 2.41
127 128 8.899427 ATACATGTCATCTCATTTCCTACAAG 57.101 34.615 0.00 0.00 0.00 3.16
128 129 6.950842 ACATGTCATCTCATTTCCTACAAGA 58.049 36.000 0.00 0.00 0.00 3.02
129 130 7.571919 ACATGTCATCTCATTTCCTACAAGAT 58.428 34.615 0.00 0.00 0.00 2.40
130 131 8.051535 ACATGTCATCTCATTTCCTACAAGATT 58.948 33.333 0.00 0.00 0.00 2.40
131 132 8.557864 CATGTCATCTCATTTCCTACAAGATTC 58.442 37.037 0.00 0.00 0.00 2.52
132 133 7.050377 TGTCATCTCATTTCCTACAAGATTCC 58.950 38.462 0.00 0.00 0.00 3.01
133 134 7.092712 TGTCATCTCATTTCCTACAAGATTCCT 60.093 37.037 0.00 0.00 0.00 3.36
134 135 8.424918 GTCATCTCATTTCCTACAAGATTCCTA 58.575 37.037 0.00 0.00 0.00 2.94
135 136 9.163894 TCATCTCATTTCCTACAAGATTCCTAT 57.836 33.333 0.00 0.00 0.00 2.57
136 137 9.790344 CATCTCATTTCCTACAAGATTCCTATT 57.210 33.333 0.00 0.00 0.00 1.73
138 139 8.432805 TCTCATTTCCTACAAGATTCCTATTCC 58.567 37.037 0.00 0.00 0.00 3.01
139 140 8.337118 TCATTTCCTACAAGATTCCTATTCCT 57.663 34.615 0.00 0.00 0.00 3.36
140 141 9.447279 TCATTTCCTACAAGATTCCTATTCCTA 57.553 33.333 0.00 0.00 0.00 2.94
143 144 9.447279 TTTCCTACAAGATTCCTATTCCTATGA 57.553 33.333 0.00 0.00 0.00 2.15
144 145 9.621239 TTCCTACAAGATTCCTATTCCTATGAT 57.379 33.333 0.00 0.00 0.00 2.45
162 163 9.661954 TCCTATGATAATCCTATCCTATGAACC 57.338 37.037 0.00 0.00 34.10 3.62
163 164 9.439461 CCTATGATAATCCTATCCTATGAACCA 57.561 37.037 0.00 0.00 34.10 3.67
170 171 6.500589 TCCTATCCTATGAACCAAAAGAGG 57.499 41.667 0.00 0.00 0.00 3.69
171 172 5.369699 TCCTATCCTATGAACCAAAAGAGGG 59.630 44.000 0.00 0.00 0.00 4.30
172 173 5.369699 CCTATCCTATGAACCAAAAGAGGGA 59.630 44.000 0.00 0.00 0.00 4.20
173 174 5.796502 ATCCTATGAACCAAAAGAGGGAA 57.203 39.130 0.00 0.00 0.00 3.97
174 175 5.796502 TCCTATGAACCAAAAGAGGGAAT 57.203 39.130 0.00 0.00 0.00 3.01
175 176 5.755849 TCCTATGAACCAAAAGAGGGAATC 58.244 41.667 0.00 0.00 0.00 2.52
176 177 5.492524 TCCTATGAACCAAAAGAGGGAATCT 59.507 40.000 0.00 0.00 41.27 2.40
188 189 6.642733 AAGAGGGAATCTTGTAGGAAATGA 57.357 37.500 0.00 0.00 46.80 2.57
189 190 6.245890 AGAGGGAATCTTGTAGGAAATGAG 57.754 41.667 0.00 0.00 32.99 2.90
190 191 5.966935 AGAGGGAATCTTGTAGGAAATGAGA 59.033 40.000 0.00 0.00 32.99 3.27
191 192 6.619023 AGAGGGAATCTTGTAGGAAATGAGAT 59.381 38.462 0.00 0.00 32.99 2.75
192 193 6.599445 AGGGAATCTTGTAGGAAATGAGATG 58.401 40.000 0.00 0.00 0.00 2.90
193 194 6.388100 AGGGAATCTTGTAGGAAATGAGATGA 59.612 38.462 0.00 0.00 0.00 2.92
194 195 6.484977 GGGAATCTTGTAGGAAATGAGATGAC 59.515 42.308 0.00 0.00 0.00 3.06
195 196 7.050377 GGAATCTTGTAGGAAATGAGATGACA 58.950 38.462 0.00 0.00 0.00 3.58
196 197 7.718753 GGAATCTTGTAGGAAATGAGATGACAT 59.281 37.037 0.00 0.00 0.00 3.06
197 198 8.447924 AATCTTGTAGGAAATGAGATGACATG 57.552 34.615 0.00 0.00 0.00 3.21
198 199 6.950842 TCTTGTAGGAAATGAGATGACATGT 58.049 36.000 0.00 0.00 0.00 3.21
199 200 8.078060 TCTTGTAGGAAATGAGATGACATGTA 57.922 34.615 0.00 0.00 0.00 2.29
200 201 8.708378 TCTTGTAGGAAATGAGATGACATGTAT 58.292 33.333 0.00 0.00 0.00 2.29
201 202 8.893219 TTGTAGGAAATGAGATGACATGTATC 57.107 34.615 0.00 2.87 0.00 2.24
202 203 8.255111 TGTAGGAAATGAGATGACATGTATCT 57.745 34.615 14.05 14.05 37.59 1.98
203 204 8.363390 TGTAGGAAATGAGATGACATGTATCTC 58.637 37.037 24.04 24.04 46.82 2.75
226 227 9.883293 TCTCAAATTCTATGAGTAGGAATAGGA 57.117 33.333 5.71 0.00 43.77 2.94
233 234 9.488762 TTCTATGAGTAGGAATAGGAAACAAGA 57.511 33.333 0.00 0.00 0.00 3.02
234 235 9.661954 TCTATGAGTAGGAATAGGAAACAAGAT 57.338 33.333 0.00 0.00 0.00 2.40
235 236 9.703892 CTATGAGTAGGAATAGGAAACAAGATG 57.296 37.037 0.00 0.00 0.00 2.90
236 237 7.496346 TGAGTAGGAATAGGAAACAAGATGT 57.504 36.000 0.00 0.00 0.00 3.06
237 238 7.556844 TGAGTAGGAATAGGAAACAAGATGTC 58.443 38.462 0.00 0.00 0.00 3.06
238 239 7.180229 TGAGTAGGAATAGGAAACAAGATGTCA 59.820 37.037 0.00 0.00 0.00 3.58
239 240 8.095452 AGTAGGAATAGGAAACAAGATGTCAT 57.905 34.615 0.00 0.00 0.00 3.06
240 241 8.552296 AGTAGGAATAGGAAACAAGATGTCATT 58.448 33.333 0.00 0.00 0.00 2.57
241 242 9.178758 GTAGGAATAGGAAACAAGATGTCATTT 57.821 33.333 0.00 0.00 0.00 2.32
242 243 8.059798 AGGAATAGGAAACAAGATGTCATTTG 57.940 34.615 0.00 0.00 0.00 2.32
243 244 7.123247 AGGAATAGGAAACAAGATGTCATTTGG 59.877 37.037 10.50 0.00 0.00 3.28
244 245 7.093771 GGAATAGGAAACAAGATGTCATTTGGT 60.094 37.037 10.50 3.75 0.00 3.67
245 246 7.781324 ATAGGAAACAAGATGTCATTTGGTT 57.219 32.000 9.41 9.41 36.95 3.67
246 247 5.846203 AGGAAACAAGATGTCATTTGGTTG 58.154 37.500 12.70 6.32 34.55 3.77
247 248 5.598005 AGGAAACAAGATGTCATTTGGTTGA 59.402 36.000 12.70 0.00 34.55 3.18
248 249 5.691754 GGAAACAAGATGTCATTTGGTTGAC 59.308 40.000 12.70 0.00 45.05 3.18
259 260 7.951530 GTCATTTGGTTGACATCAAAAGAAT 57.048 32.000 9.65 0.00 44.38 2.40
260 261 8.369218 GTCATTTGGTTGACATCAAAAGAATT 57.631 30.769 9.65 0.00 44.38 2.17
261 262 8.829612 GTCATTTGGTTGACATCAAAAGAATTT 58.170 29.630 9.65 0.00 44.38 1.82
278 279 6.765915 AGAATTTTTCCATTGAGTCTAGGC 57.234 37.500 0.00 0.00 0.00 3.93
279 280 6.488715 AGAATTTTTCCATTGAGTCTAGGCT 58.511 36.000 0.00 0.00 0.00 4.58
280 281 6.601217 AGAATTTTTCCATTGAGTCTAGGCTC 59.399 38.462 17.74 17.74 36.12 4.70
281 282 5.505181 TTTTTCCATTGAGTCTAGGCTCT 57.495 39.130 24.20 2.95 36.51 4.09
282 283 5.505181 TTTTCCATTGAGTCTAGGCTCTT 57.495 39.130 24.20 9.92 36.51 2.85
283 284 5.505181 TTTCCATTGAGTCTAGGCTCTTT 57.495 39.130 24.20 9.56 36.51 2.52
284 285 5.505181 TTCCATTGAGTCTAGGCTCTTTT 57.495 39.130 24.20 7.12 36.51 2.27
285 286 5.505181 TCCATTGAGTCTAGGCTCTTTTT 57.495 39.130 24.20 4.72 36.51 1.94
313 314 6.439636 TCCCTATGAAATGTGAAGGATAGG 57.560 41.667 0.00 0.00 34.56 2.57
314 315 6.150332 TCCCTATGAAATGTGAAGGATAGGA 58.850 40.000 0.00 0.00 36.16 2.94
315 316 6.619437 TCCCTATGAAATGTGAAGGATAGGAA 59.381 38.462 0.00 0.00 36.16 3.36
316 317 6.712547 CCCTATGAAATGTGAAGGATAGGAAC 59.287 42.308 0.00 0.00 36.16 3.62
317 318 6.712547 CCTATGAAATGTGAAGGATAGGAACC 59.287 42.308 0.00 0.00 36.16 3.62
318 319 5.512942 TGAAATGTGAAGGATAGGAACCA 57.487 39.130 0.00 0.00 0.00 3.67
319 320 5.886609 TGAAATGTGAAGGATAGGAACCAA 58.113 37.500 0.00 0.00 0.00 3.67
320 321 6.493166 TGAAATGTGAAGGATAGGAACCAAT 58.507 36.000 0.00 0.00 0.00 3.16
321 322 6.603201 TGAAATGTGAAGGATAGGAACCAATC 59.397 38.462 0.00 0.00 0.00 2.67
358 359 6.901081 GGAATCCATCCCTATAAACCAAAG 57.099 41.667 0.00 0.00 43.00 2.77
359 360 5.775195 GGAATCCATCCCTATAAACCAAAGG 59.225 44.000 0.00 0.00 43.00 3.11
360 361 4.178956 TCCATCCCTATAAACCAAAGGC 57.821 45.455 0.00 0.00 0.00 4.35
361 362 3.117284 TCCATCCCTATAAACCAAAGGCC 60.117 47.826 0.00 0.00 0.00 5.19
362 363 3.117131 CCATCCCTATAAACCAAAGGCCT 60.117 47.826 0.00 0.00 0.00 5.19
363 364 3.945640 TCCCTATAAACCAAAGGCCTC 57.054 47.619 5.23 0.00 0.00 4.70
364 365 3.470868 TCCCTATAAACCAAAGGCCTCT 58.529 45.455 5.23 0.00 0.00 3.69
365 366 4.637600 TCCCTATAAACCAAAGGCCTCTA 58.362 43.478 5.23 0.00 0.00 2.43
366 367 5.041015 TCCCTATAAACCAAAGGCCTCTAA 58.959 41.667 5.23 0.00 0.00 2.10
367 368 5.493250 TCCCTATAAACCAAAGGCCTCTAAA 59.507 40.000 5.23 0.00 0.00 1.85
368 369 5.828328 CCCTATAAACCAAAGGCCTCTAAAG 59.172 44.000 5.23 0.00 0.00 1.85
369 370 5.828328 CCTATAAACCAAAGGCCTCTAAAGG 59.172 44.000 5.23 6.53 46.44 3.11
370 371 3.895704 AAACCAAAGGCCTCTAAAGGA 57.104 42.857 5.23 0.00 46.67 3.36
371 372 3.895704 AACCAAAGGCCTCTAAAGGAA 57.104 42.857 5.23 0.00 46.67 3.36
372 373 3.895704 ACCAAAGGCCTCTAAAGGAAA 57.104 42.857 5.23 0.00 46.67 3.13
373 374 4.193240 ACCAAAGGCCTCTAAAGGAAAA 57.807 40.909 5.23 0.00 46.67 2.29
374 375 4.552674 ACCAAAGGCCTCTAAAGGAAAAA 58.447 39.130 5.23 0.00 46.67 1.94
424 425 9.183368 AGAATTTCTATGAAATTCCTCTGAACC 57.817 33.333 27.79 11.72 43.88 3.62
425 426 8.884124 AATTTCTATGAAATTCCTCTGAACCA 57.116 30.769 11.18 0.00 32.13 3.67
426 427 8.884124 ATTTCTATGAAATTCCTCTGAACCAA 57.116 30.769 0.25 0.00 32.13 3.67
427 428 8.704849 TTTCTATGAAATTCCTCTGAACCAAA 57.295 30.769 0.00 0.00 32.13 3.28
428 429 7.928307 TCTATGAAATTCCTCTGAACCAAAG 57.072 36.000 0.00 0.00 32.13 2.77
429 430 5.990120 ATGAAATTCCTCTGAACCAAAGG 57.010 39.130 0.00 0.00 32.13 3.11
430 431 5.060427 TGAAATTCCTCTGAACCAAAGGA 57.940 39.130 0.00 0.00 37.42 3.36
431 432 5.072741 TGAAATTCCTCTGAACCAAAGGAG 58.927 41.667 0.00 0.00 40.21 3.69
432 433 3.728385 ATTCCTCTGAACCAAAGGAGG 57.272 47.619 0.00 0.00 44.69 4.30
433 434 0.693049 TCCTCTGAACCAAAGGAGGC 59.307 55.000 0.00 0.00 43.46 4.70
434 435 0.322906 CCTCTGAACCAAAGGAGGCC 60.323 60.000 0.00 0.00 38.82 5.19
435 436 0.322906 CTCTGAACCAAAGGAGGCCC 60.323 60.000 0.00 0.00 0.00 5.80
437 438 0.991920 CTGAACCAAAGGAGGCCCTA 59.008 55.000 0.00 0.00 43.48 3.53
438 439 1.354368 CTGAACCAAAGGAGGCCCTAA 59.646 52.381 0.00 0.00 43.48 2.69
439 440 2.000048 TGAACCAAAGGAGGCCCTAAT 59.000 47.619 0.00 0.00 43.48 1.73
440 441 2.291540 TGAACCAAAGGAGGCCCTAATG 60.292 50.000 0.00 0.00 43.48 1.90
441 442 1.681229 ACCAAAGGAGGCCCTAATGA 58.319 50.000 0.00 0.00 43.48 2.57
447 448 2.706350 AGGAGGCCCTAATGATTAGCA 58.294 47.619 6.69 0.00 42.15 3.49
461 462 3.382227 TGATTAGCATTGAACATGCCCTG 59.618 43.478 3.17 0.00 45.59 4.45
504 505 1.099295 TTCTAGAAGGCGGCGATCGA 61.099 55.000 21.57 0.40 42.43 3.59
617 618 6.090129 TGTTCATAGTTATTGCCGCTTTTTC 58.910 36.000 0.00 0.00 0.00 2.29
646 649 7.204243 TGACCAACTACTACTCCTACATCTA 57.796 40.000 0.00 0.00 0.00 1.98
704 709 6.429791 TCTGAATCTCTTTCTCTGTCTACG 57.570 41.667 0.00 0.00 35.23 3.51
719 724 2.028385 GTCTACGGAAGCAAGAAAGGGA 60.028 50.000 0.00 0.00 0.00 4.20
723 728 3.230976 ACGGAAGCAAGAAAGGGAAAAT 58.769 40.909 0.00 0.00 0.00 1.82
724 729 4.403734 ACGGAAGCAAGAAAGGGAAAATA 58.596 39.130 0.00 0.00 0.00 1.40
725 730 4.459337 ACGGAAGCAAGAAAGGGAAAATAG 59.541 41.667 0.00 0.00 0.00 1.73
888 895 3.661648 GCCTGGCCTTCCTTCCCA 61.662 66.667 7.66 0.00 0.00 4.37
989 1000 3.550233 CGTACGAGAGGAGAGAGAGAGAG 60.550 56.522 10.44 0.00 0.00 3.20
990 1001 2.747177 ACGAGAGGAGAGAGAGAGAGA 58.253 52.381 0.00 0.00 0.00 3.10
1204 1220 5.843878 TCGATTTGATTTCGTTTCGTTTCTG 59.156 36.000 0.00 0.00 37.82 3.02
1211 1227 0.790814 CGTTTCGTTTCTGCCTCTCC 59.209 55.000 0.00 0.00 0.00 3.71
1217 1233 1.136305 CGTTTCTGCCTCTCCGGAATA 59.864 52.381 5.23 0.00 33.16 1.75
1225 1241 4.703897 TGCCTCTCCGGAATAATTTACAG 58.296 43.478 5.23 0.00 33.16 2.74
1232 1248 5.357257 TCCGGAATAATTTACAGAGCTGTC 58.643 41.667 0.00 0.00 43.74 3.51
1253 1269 3.425713 CGTTCGGTCGGTCTCGGA 61.426 66.667 0.00 0.00 36.95 4.55
1254 1270 2.758089 CGTTCGGTCGGTCTCGGAT 61.758 63.158 0.00 0.00 36.95 4.18
1334 1351 2.356069 GCTGAATCCTTCGAACAATCCC 59.644 50.000 0.00 0.00 0.00 3.85
1509 1530 1.070289 ACGTCTTGTGGTTTCCTCCTC 59.930 52.381 0.00 0.00 0.00 3.71
1533 1559 7.585867 TCGTCGGAATTAGATAGAAGATTCAG 58.414 38.462 0.00 0.00 31.72 3.02
1586 3303 8.107591 TGCTACGTAGAATAATTTAACGTCAC 57.892 34.615 26.53 2.62 44.79 3.67
1630 3347 2.286418 CCTTGTTTTGCTCTGTCGTGTC 60.286 50.000 0.00 0.00 0.00 3.67
1845 3564 5.594317 AGAAAACCAAACTACAGCTGAACAT 59.406 36.000 23.35 0.00 0.00 2.71
1920 3641 9.809096 TGTATTCTCTCTACAGAAACATCATTC 57.191 33.333 0.00 0.00 35.99 2.67
2077 3813 4.037208 ACTCAATGCCTCTCAGTTTTGTTG 59.963 41.667 0.00 0.00 0.00 3.33
2181 3917 2.154854 ACGACACTGTGATCAAGGTG 57.845 50.000 15.86 20.75 35.99 4.00
2202 3938 1.078143 GGCTTCAATCCGGAGCTGT 60.078 57.895 11.34 0.00 0.00 4.40
2247 3983 1.027357 GCGATCAGGGCATTTGATGT 58.973 50.000 3.56 0.00 35.50 3.06
2255 3991 2.971330 AGGGCATTTGATGTTTGTTCCA 59.029 40.909 0.00 0.00 0.00 3.53
2265 4001 3.940209 TGTTTGTTCCATGATCTTGCC 57.060 42.857 3.07 0.00 0.00 4.52
2292 4277 8.307483 CACTCCTTTTTCTCTGAGATAACACTA 58.693 37.037 8.42 0.00 0.00 2.74
2349 4334 9.109393 AGTATTATTATGTGTGGCTAGTGTTTG 57.891 33.333 0.00 0.00 0.00 2.93
2547 4532 6.065374 ACAATGGATGTTAGTGTGTTACCAA 58.935 36.000 0.00 0.00 40.06 3.67
2575 4560 5.527582 GGTTATGTTGCCGTCTTCATTAGAT 59.472 40.000 0.00 0.00 34.79 1.98
2618 4603 3.023832 CAATTTGTGGACCCCCAGTATC 58.976 50.000 0.00 0.00 44.55 2.24
2803 4790 3.618690 GGAATCTCCTAGCTGTGTTGT 57.381 47.619 0.00 0.00 32.53 3.32
2804 4791 4.737855 GGAATCTCCTAGCTGTGTTGTA 57.262 45.455 0.00 0.00 32.53 2.41
2806 4793 5.293560 GGAATCTCCTAGCTGTGTTGTATC 58.706 45.833 0.00 0.00 32.53 2.24
2807 4794 5.163405 GGAATCTCCTAGCTGTGTTGTATCA 60.163 44.000 0.00 0.00 32.53 2.15
2808 4795 5.939764 ATCTCCTAGCTGTGTTGTATCAA 57.060 39.130 0.00 0.00 0.00 2.57
2939 5002 8.421249 TTCTTGGTTTCACTGGATATTGAAAT 57.579 30.769 4.13 0.00 42.24 2.17
3042 5105 2.495155 AACAGTGGCATGCTGACATA 57.505 45.000 18.92 0.00 37.93 2.29
3049 5112 2.158430 TGGCATGCTGACATATCCCATT 60.158 45.455 18.92 0.00 33.67 3.16
3050 5113 2.230508 GGCATGCTGACATATCCCATTG 59.769 50.000 18.92 0.00 33.67 2.82
3169 5232 1.597742 CTCCACTGGAACACCAACTG 58.402 55.000 0.00 0.00 32.95 3.16
3211 5274 8.818057 CCAATACTAGAAAGCATGTTGTAGTAC 58.182 37.037 12.50 0.00 40.57 2.73
3408 5631 7.985476 TGGTCAAAACTTAAGAGAAGTTTGAG 58.015 34.615 10.09 10.96 46.33 3.02
3578 5801 3.118702 TCCGTGCTAATTCGGTAATTCCA 60.119 43.478 3.53 0.00 45.88 3.53
3581 5804 5.204833 CGTGCTAATTCGGTAATTCCATTG 58.795 41.667 0.00 0.00 36.67 2.82
3703 5926 2.095567 CACAGTGCATGTAGAAGTTGGC 60.096 50.000 0.00 0.00 41.41 4.52
3729 5952 8.353684 CGACTCTATTACATGTGATCTACCTTT 58.646 37.037 9.11 0.00 0.00 3.11
3761 5984 9.646427 TTAGTGTTTCAAATATATTTTGTGGGC 57.354 29.630 8.01 0.00 0.00 5.36
3929 6153 0.911769 TGGTAAGGTCAGCCCTGATG 59.088 55.000 0.77 0.00 45.47 3.07
4051 6275 9.109393 TGAAAATGGAGCTACTAATATGTCAAC 57.891 33.333 0.00 0.00 0.00 3.18
4067 6291 5.092554 TGTCAACCACACTCTTTCTTGTA 57.907 39.130 0.00 0.00 0.00 2.41
4079 6303 9.726438 ACACTCTTTCTTGTATATGCTTTAACT 57.274 29.630 0.00 0.00 0.00 2.24
4331 6555 1.980765 AGCAGTGGATGAGTTCCTTCA 59.019 47.619 0.00 0.00 45.68 3.02
4389 6613 3.066760 ACTGCAGTTTTCAGTACCTTTGC 59.933 43.478 15.25 0.00 42.45 3.68
4405 6629 9.561069 AGTACCTTTGCGATATATTCTCATTTT 57.439 29.630 0.00 0.00 0.00 1.82
4451 6675 4.633126 ACAGATTCGTGAGGATGATGTTTG 59.367 41.667 0.00 0.00 0.00 2.93
4588 6812 6.572519 TGTTTATTGCTTGTTGCTTTCTTCT 58.427 32.000 0.00 0.00 43.37 2.85
4669 6893 5.299279 GGTTGAAGACATTGGAGAACTCAAA 59.701 40.000 4.23 0.00 0.00 2.69
4928 7152 7.589958 TTCTAGTCAAGTCTTTTCTCTGACT 57.410 36.000 8.01 8.01 44.40 3.41
4942 7166 8.690203 TTTTCTCTGACTTGGTGATGAAATTA 57.310 30.769 0.00 0.00 0.00 1.40
5112 7336 8.655092 CAGTTCTGATCTAAACTCTGATGTTTC 58.345 37.037 9.49 0.00 40.23 2.78
5164 7388 3.075866 CCGTATAGGTGAAACGAGGAC 57.924 52.381 0.00 0.00 38.89 3.85
5375 7600 7.687941 ACCTGACTAACTTGATTGTAATTGG 57.312 36.000 0.00 0.00 0.00 3.16
5509 7734 2.183679 GAGTCTGTTCCTGAGATGGGT 58.816 52.381 0.00 0.00 0.00 4.51
5734 7961 6.476706 GCTCATCATAAAACAGCCATTTAACC 59.523 38.462 0.00 0.00 0.00 2.85
5753 7980 9.930158 ATTTAACCTGCCATTATAAGGTCTTTA 57.070 29.630 0.00 0.00 43.62 1.85
5759 7986 8.784043 CCTGCCATTATAAGGTCTTTAACATAC 58.216 37.037 0.00 0.00 0.00 2.39
5787 8014 4.767478 TCTCTGAATGCTTCTTCTGGATG 58.233 43.478 0.00 0.00 0.00 3.51
5946 8173 6.543831 ACATATTTGGTCAAGCTCCTAATGTC 59.456 38.462 9.04 0.00 33.83 3.06
5986 8213 0.518636 CAACCTCCACGCACTCATTG 59.481 55.000 0.00 0.00 0.00 2.82
6245 8476 2.157738 CTGGCAAAGAGAAGAAGGTGG 58.842 52.381 0.00 0.00 0.00 4.61
6448 8705 4.873129 CGCGACCTCATCACCCCG 62.873 72.222 0.00 0.00 0.00 5.73
6542 8799 6.925610 ACATATGTATTTTGCATCGTGTCT 57.074 33.333 6.56 0.00 0.00 3.41
7117 9375 7.651304 TCGATGTTAAAATTTTGTGATTGCACT 59.349 29.630 13.76 0.00 45.36 4.40
7182 9440 2.341846 AGTCCTTGCAGTCCGAAAAA 57.658 45.000 0.00 0.00 0.00 1.94
7189 9447 4.215399 CCTTGCAGTCCGAAAAATAACAGA 59.785 41.667 0.00 0.00 0.00 3.41
7292 9556 5.698741 TGACCATCACTCCTTCAATACAT 57.301 39.130 0.00 0.00 0.00 2.29
7304 9568 9.251440 ACTCCTTCAATACATTGTACAGTACTA 57.749 33.333 12.07 4.78 38.84 1.82
7305 9569 9.517609 CTCCTTCAATACATTGTACAGTACTAC 57.482 37.037 12.07 0.00 38.84 2.73
7325 9589 3.993920 ACCTTTTTGCATCCATTGTGAC 58.006 40.909 0.00 0.00 0.00 3.67
7340 9604 3.285816 TGTGACGCTATTGTACGTGAA 57.714 42.857 0.00 0.00 43.71 3.18
7347 9611 3.242284 CGCTATTGTACGTGAAATGGTGG 60.242 47.826 0.00 0.00 0.00 4.61
7363 9627 2.769893 GGTGGTGTACCTTCGCTTTAA 58.230 47.619 2.32 0.00 46.51 1.52
7377 9641 2.679639 CGCTTTAATGTGCACTCCCCTA 60.680 50.000 19.41 0.00 0.00 3.53
7378 9642 2.945668 GCTTTAATGTGCACTCCCCTAG 59.054 50.000 19.41 9.37 0.00 3.02
7379 9643 3.622455 GCTTTAATGTGCACTCCCCTAGT 60.622 47.826 19.41 0.00 39.81 2.57
7380 9644 3.906720 TTAATGTGCACTCCCCTAGTC 57.093 47.619 19.41 0.00 35.76 2.59
7381 9645 0.912486 AATGTGCACTCCCCTAGTCC 59.088 55.000 19.41 0.00 35.76 3.85
7382 9646 0.983378 ATGTGCACTCCCCTAGTCCC 60.983 60.000 19.41 0.00 35.76 4.46
7383 9647 2.040606 TGCACTCCCCTAGTCCCC 59.959 66.667 0.00 0.00 35.76 4.81
7384 9648 2.369001 GCACTCCCCTAGTCCCCT 59.631 66.667 0.00 0.00 35.76 4.79
7385 9649 1.307084 GCACTCCCCTAGTCCCCTT 60.307 63.158 0.00 0.00 35.76 3.95
7386 9650 0.914902 GCACTCCCCTAGTCCCCTTT 60.915 60.000 0.00 0.00 35.76 3.11
7387 9651 1.670059 CACTCCCCTAGTCCCCTTTT 58.330 55.000 0.00 0.00 35.76 2.27
7388 9652 1.993301 CACTCCCCTAGTCCCCTTTTT 59.007 52.381 0.00 0.00 35.76 1.94
7389 9653 1.993301 ACTCCCCTAGTCCCCTTTTTG 59.007 52.381 0.00 0.00 30.33 2.44
7390 9654 1.285078 CTCCCCTAGTCCCCTTTTTGG 59.715 57.143 0.00 0.00 0.00 3.28
7405 9669 6.267496 CCTTTTTGGGTGGTAGATAACTTG 57.733 41.667 0.00 0.00 0.00 3.16
7406 9670 6.007703 CCTTTTTGGGTGGTAGATAACTTGA 58.992 40.000 0.00 0.00 0.00 3.02
7407 9671 6.663523 CCTTTTTGGGTGGTAGATAACTTGAT 59.336 38.462 0.00 0.00 0.00 2.57
7408 9672 7.362920 CCTTTTTGGGTGGTAGATAACTTGATG 60.363 40.741 0.00 0.00 0.00 3.07
7409 9673 4.150897 TGGGTGGTAGATAACTTGATGC 57.849 45.455 0.00 0.00 0.00 3.91
7410 9674 3.131396 GGGTGGTAGATAACTTGATGCG 58.869 50.000 0.00 0.00 0.00 4.73
7411 9675 3.431766 GGGTGGTAGATAACTTGATGCGT 60.432 47.826 0.00 0.00 0.00 5.24
7412 9676 3.555956 GGTGGTAGATAACTTGATGCGTG 59.444 47.826 0.00 0.00 0.00 5.34
7413 9677 4.430007 GTGGTAGATAACTTGATGCGTGA 58.570 43.478 0.00 0.00 0.00 4.35
7414 9678 4.504461 GTGGTAGATAACTTGATGCGTGAG 59.496 45.833 0.00 0.00 0.00 3.51
7415 9679 4.051922 GGTAGATAACTTGATGCGTGAGG 58.948 47.826 0.00 0.00 0.00 3.86
7416 9680 3.895232 AGATAACTTGATGCGTGAGGT 57.105 42.857 0.00 0.00 0.00 3.85
7417 9681 4.207891 AGATAACTTGATGCGTGAGGTT 57.792 40.909 0.00 0.00 0.00 3.50
7418 9682 4.184629 AGATAACTTGATGCGTGAGGTTC 58.815 43.478 0.00 0.00 0.00 3.62
7419 9683 1.148310 AACTTGATGCGTGAGGTTCG 58.852 50.000 0.00 0.00 0.00 3.95
7426 9690 4.598257 CGTGAGGTTCGCTCCATT 57.402 55.556 0.00 0.00 0.00 3.16
7427 9691 2.840974 CGTGAGGTTCGCTCCATTT 58.159 52.632 0.00 0.00 0.00 2.32
7428 9692 1.156736 CGTGAGGTTCGCTCCATTTT 58.843 50.000 0.00 0.00 0.00 1.82
7429 9693 1.535462 CGTGAGGTTCGCTCCATTTTT 59.465 47.619 0.00 0.00 0.00 1.94
7452 9716 7.926674 TTTAGATCATTTGAACATCTGAGCA 57.073 32.000 0.00 0.00 0.00 4.26
7453 9717 7.549615 TTAGATCATTTGAACATCTGAGCAG 57.450 36.000 0.00 0.00 0.00 4.24
7454 9718 4.335874 AGATCATTTGAACATCTGAGCAGC 59.664 41.667 0.00 0.00 0.00 5.25
7455 9719 3.682696 TCATTTGAACATCTGAGCAGCT 58.317 40.909 0.00 0.00 0.00 4.24
7456 9720 3.688185 TCATTTGAACATCTGAGCAGCTC 59.312 43.478 16.21 16.21 0.00 4.09
7457 9721 2.105006 TTGAACATCTGAGCAGCTCC 57.895 50.000 20.16 2.82 0.00 4.70
7458 9722 0.251354 TGAACATCTGAGCAGCTCCC 59.749 55.000 20.16 0.00 0.00 4.30
7459 9723 0.251354 GAACATCTGAGCAGCTCCCA 59.749 55.000 20.16 6.40 0.00 4.37
7460 9724 0.252479 AACATCTGAGCAGCTCCCAG 59.748 55.000 20.16 12.10 0.00 4.45
7461 9725 1.524165 CATCTGAGCAGCTCCCAGC 60.524 63.158 20.16 0.00 42.84 4.85
7462 9726 1.993948 ATCTGAGCAGCTCCCAGCA 60.994 57.895 20.16 0.00 45.56 4.41
7463 9727 1.559965 ATCTGAGCAGCTCCCAGCAA 61.560 55.000 20.16 0.00 45.56 3.91
7464 9728 1.303074 CTGAGCAGCTCCCAGCAAA 60.303 57.895 20.16 0.00 45.56 3.68
7465 9729 0.892358 CTGAGCAGCTCCCAGCAAAA 60.892 55.000 20.16 0.00 45.56 2.44
7466 9730 0.467844 TGAGCAGCTCCCAGCAAAAA 60.468 50.000 20.16 0.00 45.56 1.94
7494 9758 9.945904 AAAAACAAAACAAATAGGGTTAGAACA 57.054 25.926 0.00 0.00 0.00 3.18
7495 9759 9.594478 AAAACAAAACAAATAGGGTTAGAACAG 57.406 29.630 0.00 0.00 0.00 3.16
7496 9760 7.891498 ACAAAACAAATAGGGTTAGAACAGT 57.109 32.000 0.00 0.00 0.00 3.55
7497 9761 7.712797 ACAAAACAAATAGGGTTAGAACAGTG 58.287 34.615 0.00 0.00 0.00 3.66
7498 9762 5.959618 AACAAATAGGGTTAGAACAGTGC 57.040 39.130 0.00 0.00 0.00 4.40
7499 9763 4.000988 ACAAATAGGGTTAGAACAGTGCG 58.999 43.478 0.00 0.00 0.00 5.34
7500 9764 3.975168 AATAGGGTTAGAACAGTGCGT 57.025 42.857 0.00 0.00 0.00 5.24
7501 9765 2.736144 TAGGGTTAGAACAGTGCGTG 57.264 50.000 0.00 0.00 0.00 5.34
7502 9766 1.045407 AGGGTTAGAACAGTGCGTGA 58.955 50.000 0.00 0.00 0.00 4.35
7503 9767 1.414919 AGGGTTAGAACAGTGCGTGAA 59.585 47.619 0.00 0.00 0.00 3.18
7504 9768 1.529865 GGGTTAGAACAGTGCGTGAAC 59.470 52.381 0.00 0.00 0.00 3.18
7505 9769 2.206750 GGTTAGAACAGTGCGTGAACA 58.793 47.619 0.00 0.00 0.00 3.18
7506 9770 2.221055 GGTTAGAACAGTGCGTGAACAG 59.779 50.000 0.00 0.00 0.00 3.16
7507 9771 2.864343 GTTAGAACAGTGCGTGAACAGT 59.136 45.455 0.00 0.00 0.00 3.55
7508 9772 2.882927 AGAACAGTGCGTGAACAGTA 57.117 45.000 0.00 0.00 0.00 2.74
7509 9773 3.173668 AGAACAGTGCGTGAACAGTAA 57.826 42.857 0.00 0.00 0.00 2.24
7510 9774 3.527533 AGAACAGTGCGTGAACAGTAAA 58.472 40.909 0.00 0.00 0.00 2.01
7511 9775 3.308866 AGAACAGTGCGTGAACAGTAAAC 59.691 43.478 0.00 0.00 0.00 2.01
7512 9776 2.623535 ACAGTGCGTGAACAGTAAACA 58.376 42.857 0.00 0.00 0.00 2.83
7513 9777 3.202906 ACAGTGCGTGAACAGTAAACAT 58.797 40.909 0.00 0.00 0.00 2.71
7514 9778 3.625764 ACAGTGCGTGAACAGTAAACATT 59.374 39.130 0.00 0.00 0.00 2.71
7515 9779 4.095782 ACAGTGCGTGAACAGTAAACATTT 59.904 37.500 0.00 0.00 0.00 2.32
7516 9780 5.034152 CAGTGCGTGAACAGTAAACATTTT 58.966 37.500 0.00 0.00 0.00 1.82
7517 9781 5.514914 CAGTGCGTGAACAGTAAACATTTTT 59.485 36.000 0.00 0.00 0.00 1.94
7518 9782 6.689241 CAGTGCGTGAACAGTAAACATTTTTA 59.311 34.615 0.00 0.00 0.00 1.52
7519 9783 7.378461 CAGTGCGTGAACAGTAAACATTTTTAT 59.622 33.333 0.00 0.00 29.82 1.40
7520 9784 8.561212 AGTGCGTGAACAGTAAACATTTTTATA 58.439 29.630 0.00 0.00 29.82 0.98
7521 9785 8.837059 GTGCGTGAACAGTAAACATTTTTATAG 58.163 33.333 0.00 0.00 29.82 1.31
7522 9786 8.775527 TGCGTGAACAGTAAACATTTTTATAGA 58.224 29.630 0.00 0.00 29.82 1.98
7523 9787 9.047871 GCGTGAACAGTAAACATTTTTATAGAC 57.952 33.333 0.00 0.00 29.82 2.59
7524 9788 9.537848 CGTGAACAGTAAACATTTTTATAGACC 57.462 33.333 0.00 0.00 29.82 3.85
7525 9789 9.836076 GTGAACAGTAAACATTTTTATAGACCC 57.164 33.333 0.00 0.00 29.82 4.46
7526 9790 9.016438 TGAACAGTAAACATTTTTATAGACCCC 57.984 33.333 0.00 0.00 29.82 4.95
7527 9791 8.943594 AACAGTAAACATTTTTATAGACCCCA 57.056 30.769 0.00 0.00 29.82 4.96
7528 9792 8.943594 ACAGTAAACATTTTTATAGACCCCAA 57.056 30.769 0.00 0.00 29.82 4.12
7529 9793 9.369672 ACAGTAAACATTTTTATAGACCCCAAA 57.630 29.630 0.00 0.00 29.82 3.28
7558 9822 4.481195 TTTTTGCCGAGAGCTGCT 57.519 50.000 0.00 0.00 44.23 4.24
7559 9823 2.247790 TTTTTGCCGAGAGCTGCTC 58.752 52.632 21.72 21.72 44.23 4.26
7560 9824 0.534877 TTTTTGCCGAGAGCTGCTCA 60.535 50.000 29.49 8.15 44.15 4.26
7561 9825 0.952497 TTTTGCCGAGAGCTGCTCAG 60.952 55.000 29.49 21.79 44.15 3.35
7562 9826 1.820010 TTTGCCGAGAGCTGCTCAGA 61.820 55.000 29.49 7.15 44.15 3.27
7563 9827 1.611474 TTGCCGAGAGCTGCTCAGAT 61.611 55.000 29.49 10.97 44.15 2.90
7564 9828 1.592131 GCCGAGAGCTGCTCAGATG 60.592 63.158 29.49 16.14 44.15 2.90
7565 9829 1.815196 CCGAGAGCTGCTCAGATGT 59.185 57.895 29.49 10.20 44.15 3.06
7566 9830 0.175302 CCGAGAGCTGCTCAGATGTT 59.825 55.000 29.49 9.44 44.15 2.71
7567 9831 1.558741 CGAGAGCTGCTCAGATGTTC 58.441 55.000 29.49 16.52 44.15 3.18
7568 9832 1.135170 CGAGAGCTGCTCAGATGTTCA 60.135 52.381 29.49 0.00 44.15 3.18
7569 9833 2.673326 CGAGAGCTGCTCAGATGTTCAA 60.673 50.000 29.49 0.00 44.15 2.69
7570 9834 3.332919 GAGAGCTGCTCAGATGTTCAAA 58.667 45.455 29.49 0.00 43.38 2.69
7571 9835 3.940221 GAGAGCTGCTCAGATGTTCAAAT 59.060 43.478 29.49 5.90 43.38 2.32
7572 9836 3.690139 AGAGCTGCTCAGATGTTCAAATG 59.310 43.478 29.49 0.00 32.06 2.32
7573 9837 3.682696 AGCTGCTCAGATGTTCAAATGA 58.317 40.909 0.00 0.00 0.00 2.57
7574 9838 4.270834 AGCTGCTCAGATGTTCAAATGAT 58.729 39.130 0.00 0.00 0.00 2.45
7575 9839 4.705507 AGCTGCTCAGATGTTCAAATGATT 59.294 37.500 0.00 0.00 0.00 2.57
7576 9840 5.185249 AGCTGCTCAGATGTTCAAATGATTT 59.815 36.000 0.00 0.00 0.00 2.17
7577 9841 5.288712 GCTGCTCAGATGTTCAAATGATTTG 59.711 40.000 11.54 11.54 41.96 2.32
7592 9856 9.913451 TCAAATGATTTGAAAATTGAAACGAAC 57.087 25.926 17.50 0.00 45.94 3.95
7593 9857 9.157259 CAAATGATTTGAAAATTGAAACGAACC 57.843 29.630 12.37 0.00 43.26 3.62
7594 9858 8.661352 AATGATTTGAAAATTGAAACGAACCT 57.339 26.923 0.00 0.00 0.00 3.50
7595 9859 7.692908 TGATTTGAAAATTGAAACGAACCTC 57.307 32.000 0.00 0.00 0.00 3.85
7596 9860 7.261325 TGATTTGAAAATTGAAACGAACCTCA 58.739 30.769 0.00 0.00 0.00 3.86
7597 9861 6.879188 TTTGAAAATTGAAACGAACCTCAC 57.121 33.333 0.00 0.00 0.00 3.51
7598 9862 4.593157 TGAAAATTGAAACGAACCTCACG 58.407 39.130 0.00 0.00 0.00 4.35
7599 9863 2.681152 AATTGAAACGAACCTCACGC 57.319 45.000 0.00 0.00 0.00 5.34
7600 9864 1.588674 ATTGAAACGAACCTCACGCA 58.411 45.000 0.00 0.00 0.00 5.24
7601 9865 1.588674 TTGAAACGAACCTCACGCAT 58.411 45.000 0.00 0.00 0.00 4.73
7602 9866 1.144969 TGAAACGAACCTCACGCATC 58.855 50.000 0.00 0.00 0.00 3.91
7603 9867 1.144969 GAAACGAACCTCACGCATCA 58.855 50.000 0.00 0.00 0.00 3.07
7604 9868 1.529438 GAAACGAACCTCACGCATCAA 59.471 47.619 0.00 0.00 0.00 2.57
7605 9869 1.588674 AACGAACCTCACGCATCAAA 58.411 45.000 0.00 0.00 0.00 2.69
7606 9870 1.808411 ACGAACCTCACGCATCAAAT 58.192 45.000 0.00 0.00 0.00 2.32
7607 9871 2.151202 ACGAACCTCACGCATCAAATT 58.849 42.857 0.00 0.00 0.00 1.82
7608 9872 3.331150 ACGAACCTCACGCATCAAATTA 58.669 40.909 0.00 0.00 0.00 1.40
7609 9873 3.938963 ACGAACCTCACGCATCAAATTAT 59.061 39.130 0.00 0.00 0.00 1.28
7610 9874 4.034048 ACGAACCTCACGCATCAAATTATC 59.966 41.667 0.00 0.00 0.00 1.75
7611 9875 4.271049 CGAACCTCACGCATCAAATTATCT 59.729 41.667 0.00 0.00 0.00 1.98
7612 9876 5.462068 CGAACCTCACGCATCAAATTATCTA 59.538 40.000 0.00 0.00 0.00 1.98
7613 9877 6.146184 CGAACCTCACGCATCAAATTATCTAT 59.854 38.462 0.00 0.00 0.00 1.98
7614 9878 7.426929 AACCTCACGCATCAAATTATCTATC 57.573 36.000 0.00 0.00 0.00 2.08
7615 9879 6.524734 ACCTCACGCATCAAATTATCTATCA 58.475 36.000 0.00 0.00 0.00 2.15
7616 9880 6.425114 ACCTCACGCATCAAATTATCTATCAC 59.575 38.462 0.00 0.00 0.00 3.06
7617 9881 6.424812 CCTCACGCATCAAATTATCTATCACA 59.575 38.462 0.00 0.00 0.00 3.58
7618 9882 7.041848 CCTCACGCATCAAATTATCTATCACAA 60.042 37.037 0.00 0.00 0.00 3.33
7619 9883 8.207521 TCACGCATCAAATTATCTATCACAAA 57.792 30.769 0.00 0.00 0.00 2.83
7620 9884 8.672815 TCACGCATCAAATTATCTATCACAAAA 58.327 29.630 0.00 0.00 0.00 2.44
7621 9885 9.288124 CACGCATCAAATTATCTATCACAAAAA 57.712 29.630 0.00 0.00 0.00 1.94
7622 9886 9.507280 ACGCATCAAATTATCTATCACAAAAAG 57.493 29.630 0.00 0.00 0.00 2.27
7623 9887 9.720667 CGCATCAAATTATCTATCACAAAAAGA 57.279 29.630 0.00 0.00 0.00 2.52
7632 9896 6.633500 TCTATCACAAAAAGAACTGTTGGG 57.367 37.500 0.00 0.00 0.00 4.12
7633 9897 3.518634 TCACAAAAAGAACTGTTGGGC 57.481 42.857 0.00 0.00 0.00 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 8.334633 GGTTGACACCAAAGGAATTTTTCCATT 61.335 37.037 8.87 0.31 46.88 3.16
35 36 6.911529 GGTTGACACCAAAGGAATTTTTCCAT 60.912 38.462 8.87 0.00 46.88 3.41
36 37 5.627968 GGTTGACACCAAAGGAATTTTTCCA 60.628 40.000 8.87 0.00 46.88 3.53
37 38 4.814234 GGTTGACACCAAAGGAATTTTTCC 59.186 41.667 0.00 0.00 45.80 3.13
38 39 5.984233 GGTTGACACCAAAGGAATTTTTC 57.016 39.130 0.00 0.00 43.61 2.29
54 55 7.830739 AGGAAATTAGATGTCATTTGGTTGAC 58.169 34.615 0.00 0.00 45.05 3.18
55 56 9.699410 ATAGGAAATTAGATGTCATTTGGTTGA 57.301 29.630 0.00 0.00 0.00 3.18
58 59 9.136323 GGAATAGGAAATTAGATGTCATTTGGT 57.864 33.333 0.00 0.00 0.00 3.67
59 60 9.359653 AGGAATAGGAAATTAGATGTCATTTGG 57.640 33.333 0.00 0.00 0.00 3.28
64 65 9.434275 TGAGTAGGAATAGGAAATTAGATGTCA 57.566 33.333 0.00 0.00 0.00 3.58
75 76 8.660435 CCCAAATCTTATGAGTAGGAATAGGAA 58.340 37.037 0.00 0.00 0.00 3.36
76 77 8.016652 TCCCAAATCTTATGAGTAGGAATAGGA 58.983 37.037 0.00 0.00 0.00 2.94
77 78 8.207350 TCCCAAATCTTATGAGTAGGAATAGG 57.793 38.462 0.00 0.00 0.00 2.57
80 81 9.170890 TGTATCCCAAATCTTATGAGTAGGAAT 57.829 33.333 3.02 0.00 30.33 3.01
81 82 8.561536 TGTATCCCAAATCTTATGAGTAGGAA 57.438 34.615 3.02 0.00 30.33 3.36
82 83 8.597167 CATGTATCCCAAATCTTATGAGTAGGA 58.403 37.037 1.76 1.76 30.83 2.94
83 84 8.378565 ACATGTATCCCAAATCTTATGAGTAGG 58.621 37.037 0.00 0.00 0.00 3.18
84 85 9.429359 GACATGTATCCCAAATCTTATGAGTAG 57.571 37.037 0.00 0.00 0.00 2.57
85 86 8.933653 TGACATGTATCCCAAATCTTATGAGTA 58.066 33.333 0.00 0.00 0.00 2.59
86 87 7.805163 TGACATGTATCCCAAATCTTATGAGT 58.195 34.615 0.00 0.00 0.00 3.41
87 88 8.859236 ATGACATGTATCCCAAATCTTATGAG 57.141 34.615 0.00 0.00 0.00 2.90
88 89 8.663167 AGATGACATGTATCCCAAATCTTATGA 58.337 33.333 0.00 0.00 0.00 2.15
89 90 8.859236 AGATGACATGTATCCCAAATCTTATG 57.141 34.615 0.00 0.00 0.00 1.90
90 91 8.663167 TGAGATGACATGTATCCCAAATCTTAT 58.337 33.333 0.00 0.00 0.00 1.73
91 92 8.033178 TGAGATGACATGTATCCCAAATCTTA 57.967 34.615 0.00 0.00 0.00 2.10
92 93 6.903516 TGAGATGACATGTATCCCAAATCTT 58.096 36.000 0.00 0.00 0.00 2.40
93 94 6.505048 TGAGATGACATGTATCCCAAATCT 57.495 37.500 0.00 0.00 0.00 2.40
94 95 7.756395 AATGAGATGACATGTATCCCAAATC 57.244 36.000 0.00 0.00 0.00 2.17
95 96 7.232127 GGAAATGAGATGACATGTATCCCAAAT 59.768 37.037 0.00 0.00 0.00 2.32
96 97 6.547141 GGAAATGAGATGACATGTATCCCAAA 59.453 38.462 0.00 0.00 0.00 3.28
97 98 6.064060 GGAAATGAGATGACATGTATCCCAA 58.936 40.000 0.00 0.00 0.00 4.12
98 99 5.370584 AGGAAATGAGATGACATGTATCCCA 59.629 40.000 0.00 0.35 33.12 4.37
99 100 5.874093 AGGAAATGAGATGACATGTATCCC 58.126 41.667 0.00 0.00 33.12 3.85
100 101 7.445121 TGTAGGAAATGAGATGACATGTATCC 58.555 38.462 0.00 0.00 32.98 2.59
101 102 8.893219 TTGTAGGAAATGAGATGACATGTATC 57.107 34.615 0.00 2.87 0.00 2.24
102 103 8.708378 TCTTGTAGGAAATGAGATGACATGTAT 58.292 33.333 0.00 0.00 0.00 2.29
103 104 8.078060 TCTTGTAGGAAATGAGATGACATGTA 57.922 34.615 0.00 0.00 0.00 2.29
104 105 6.950842 TCTTGTAGGAAATGAGATGACATGT 58.049 36.000 0.00 0.00 0.00 3.21
105 106 8.447924 AATCTTGTAGGAAATGAGATGACATG 57.552 34.615 0.00 0.00 0.00 3.21
106 107 7.718753 GGAATCTTGTAGGAAATGAGATGACAT 59.281 37.037 0.00 0.00 0.00 3.06
107 108 7.050377 GGAATCTTGTAGGAAATGAGATGACA 58.950 38.462 0.00 0.00 0.00 3.58
108 109 7.278875 AGGAATCTTGTAGGAAATGAGATGAC 58.721 38.462 0.00 0.00 0.00 3.06
109 110 7.443302 AGGAATCTTGTAGGAAATGAGATGA 57.557 36.000 0.00 0.00 0.00 2.92
110 111 9.790344 AATAGGAATCTTGTAGGAAATGAGATG 57.210 33.333 0.00 0.00 0.00 2.90
112 113 8.432805 GGAATAGGAATCTTGTAGGAAATGAGA 58.567 37.037 0.00 0.00 0.00 3.27
113 114 8.435982 AGGAATAGGAATCTTGTAGGAAATGAG 58.564 37.037 0.00 0.00 0.00 2.90
114 115 8.337118 AGGAATAGGAATCTTGTAGGAAATGA 57.663 34.615 0.00 0.00 0.00 2.57
117 118 9.447279 TCATAGGAATAGGAATCTTGTAGGAAA 57.553 33.333 0.00 0.00 0.00 3.13
118 119 9.621239 ATCATAGGAATAGGAATCTTGTAGGAA 57.379 33.333 0.00 0.00 0.00 3.36
136 137 9.661954 GGTTCATAGGATAGGATTATCATAGGA 57.338 37.037 0.00 1.09 39.88 2.94
137 138 9.439461 TGGTTCATAGGATAGGATTATCATAGG 57.561 37.037 0.00 0.00 36.37 2.57
144 145 8.660435 CCTCTTTTGGTTCATAGGATAGGATTA 58.340 37.037 0.00 0.00 28.27 1.75
145 146 7.421853 CCCTCTTTTGGTTCATAGGATAGGATT 60.422 40.741 0.00 0.00 28.27 3.01
146 147 6.044871 CCCTCTTTTGGTTCATAGGATAGGAT 59.955 42.308 0.00 0.00 28.27 3.24
147 148 5.369699 CCCTCTTTTGGTTCATAGGATAGGA 59.630 44.000 0.00 0.00 0.00 2.94
148 149 5.369699 TCCCTCTTTTGGTTCATAGGATAGG 59.630 44.000 0.00 0.00 0.00 2.57
149 150 6.500589 TCCCTCTTTTGGTTCATAGGATAG 57.499 41.667 0.00 0.00 0.00 2.08
150 151 6.901615 TTCCCTCTTTTGGTTCATAGGATA 57.098 37.500 0.00 0.00 0.00 2.59
151 152 5.796502 TTCCCTCTTTTGGTTCATAGGAT 57.203 39.130 0.00 0.00 0.00 3.24
152 153 5.492524 AGATTCCCTCTTTTGGTTCATAGGA 59.507 40.000 0.00 0.00 0.00 2.94
153 154 5.760131 AGATTCCCTCTTTTGGTTCATAGG 58.240 41.667 0.00 0.00 0.00 2.57
154 155 6.660949 ACAAGATTCCCTCTTTTGGTTCATAG 59.339 38.462 0.00 0.00 41.60 2.23
155 156 6.552008 ACAAGATTCCCTCTTTTGGTTCATA 58.448 36.000 0.00 0.00 41.60 2.15
156 157 5.397360 ACAAGATTCCCTCTTTTGGTTCAT 58.603 37.500 0.00 0.00 41.60 2.57
157 158 4.803452 ACAAGATTCCCTCTTTTGGTTCA 58.197 39.130 0.00 0.00 41.60 3.18
158 159 5.416013 CCTACAAGATTCCCTCTTTTGGTTC 59.584 44.000 0.00 0.00 41.60 3.62
159 160 5.074515 TCCTACAAGATTCCCTCTTTTGGTT 59.925 40.000 0.00 0.00 41.60 3.67
160 161 4.601857 TCCTACAAGATTCCCTCTTTTGGT 59.398 41.667 0.00 0.00 41.60 3.67
161 162 5.179452 TCCTACAAGATTCCCTCTTTTGG 57.821 43.478 0.00 0.00 41.60 3.28
162 163 7.394359 TCATTTCCTACAAGATTCCCTCTTTTG 59.606 37.037 0.00 0.00 41.60 2.44
163 164 7.470192 TCATTTCCTACAAGATTCCCTCTTTT 58.530 34.615 0.00 0.00 41.60 2.27
164 165 7.032598 TCATTTCCTACAAGATTCCCTCTTT 57.967 36.000 0.00 0.00 41.60 2.52
165 166 6.445139 TCTCATTTCCTACAAGATTCCCTCTT 59.555 38.462 0.00 0.00 45.34 2.85
166 167 5.966935 TCTCATTTCCTACAAGATTCCCTCT 59.033 40.000 0.00 0.00 34.96 3.69
167 168 6.240549 TCTCATTTCCTACAAGATTCCCTC 57.759 41.667 0.00 0.00 0.00 4.30
168 169 6.388100 TCATCTCATTTCCTACAAGATTCCCT 59.612 38.462 0.00 0.00 0.00 4.20
169 170 6.484977 GTCATCTCATTTCCTACAAGATTCCC 59.515 42.308 0.00 0.00 0.00 3.97
170 171 7.050377 TGTCATCTCATTTCCTACAAGATTCC 58.950 38.462 0.00 0.00 0.00 3.01
171 172 8.557864 CATGTCATCTCATTTCCTACAAGATTC 58.442 37.037 0.00 0.00 0.00 2.52
172 173 8.051535 ACATGTCATCTCATTTCCTACAAGATT 58.948 33.333 0.00 0.00 0.00 2.40
173 174 7.571919 ACATGTCATCTCATTTCCTACAAGAT 58.428 34.615 0.00 0.00 0.00 2.40
174 175 6.950842 ACATGTCATCTCATTTCCTACAAGA 58.049 36.000 0.00 0.00 0.00 3.02
175 176 8.899427 ATACATGTCATCTCATTTCCTACAAG 57.101 34.615 0.00 0.00 0.00 3.16
176 177 8.708378 AGATACATGTCATCTCATTTCCTACAA 58.292 33.333 0.00 0.00 0.00 2.41
177 178 8.255111 AGATACATGTCATCTCATTTCCTACA 57.745 34.615 0.00 0.00 0.00 2.74
178 179 8.755696 GAGATACATGTCATCTCATTTCCTAC 57.244 38.462 24.95 8.46 45.17 3.18
200 201 9.883293 TCCTATTCCTACTCATAGAATTTGAGA 57.117 33.333 11.68 0.00 42.63 3.27
207 208 9.488762 TCTTGTTTCCTATTCCTACTCATAGAA 57.511 33.333 0.00 0.00 0.00 2.10
208 209 9.661954 ATCTTGTTTCCTATTCCTACTCATAGA 57.338 33.333 0.00 0.00 0.00 1.98
209 210 9.703892 CATCTTGTTTCCTATTCCTACTCATAG 57.296 37.037 0.00 0.00 0.00 2.23
210 211 9.213777 ACATCTTGTTTCCTATTCCTACTCATA 57.786 33.333 0.00 0.00 0.00 2.15
211 212 8.095452 ACATCTTGTTTCCTATTCCTACTCAT 57.905 34.615 0.00 0.00 0.00 2.90
212 213 7.180229 TGACATCTTGTTTCCTATTCCTACTCA 59.820 37.037 0.00 0.00 0.00 3.41
213 214 7.556844 TGACATCTTGTTTCCTATTCCTACTC 58.443 38.462 0.00 0.00 0.00 2.59
214 215 7.496346 TGACATCTTGTTTCCTATTCCTACT 57.504 36.000 0.00 0.00 0.00 2.57
215 216 8.738645 AATGACATCTTGTTTCCTATTCCTAC 57.261 34.615 0.00 0.00 0.00 3.18
216 217 9.177608 CAAATGACATCTTGTTTCCTATTCCTA 57.822 33.333 0.00 0.00 0.00 2.94
217 218 7.123247 CCAAATGACATCTTGTTTCCTATTCCT 59.877 37.037 0.00 0.00 0.00 3.36
218 219 7.093771 ACCAAATGACATCTTGTTTCCTATTCC 60.094 37.037 0.00 0.00 0.00 3.01
219 220 7.830739 ACCAAATGACATCTTGTTTCCTATTC 58.169 34.615 0.00 0.00 0.00 1.75
220 221 7.781324 ACCAAATGACATCTTGTTTCCTATT 57.219 32.000 0.00 0.00 0.00 1.73
221 222 7.451255 TCAACCAAATGACATCTTGTTTCCTAT 59.549 33.333 0.00 0.00 0.00 2.57
222 223 6.775142 TCAACCAAATGACATCTTGTTTCCTA 59.225 34.615 0.00 0.00 0.00 2.94
223 224 5.598005 TCAACCAAATGACATCTTGTTTCCT 59.402 36.000 0.00 0.00 0.00 3.36
224 225 5.841810 TCAACCAAATGACATCTTGTTTCC 58.158 37.500 0.00 0.00 0.00 3.13
236 237 8.961294 AAATTCTTTTGATGTCAACCAAATGA 57.039 26.923 11.92 11.92 35.81 2.57
239 240 8.672815 GGAAAAATTCTTTTGATGTCAACCAAA 58.327 29.630 0.00 0.00 34.83 3.28
240 241 7.826252 TGGAAAAATTCTTTTGATGTCAACCAA 59.174 29.630 0.00 0.00 34.83 3.67
241 242 7.334090 TGGAAAAATTCTTTTGATGTCAACCA 58.666 30.769 0.00 0.00 34.83 3.67
242 243 7.784633 TGGAAAAATTCTTTTGATGTCAACC 57.215 32.000 0.00 0.00 34.83 3.77
243 244 9.654417 CAATGGAAAAATTCTTTTGATGTCAAC 57.346 29.630 0.00 0.00 34.83 3.18
244 245 9.610705 TCAATGGAAAAATTCTTTTGATGTCAA 57.389 25.926 0.00 0.00 34.83 3.18
245 246 9.263538 CTCAATGGAAAAATTCTTTTGATGTCA 57.736 29.630 7.93 0.00 34.83 3.58
246 247 9.264719 ACTCAATGGAAAAATTCTTTTGATGTC 57.735 29.630 7.93 0.00 34.83 3.06
247 248 9.264719 GACTCAATGGAAAAATTCTTTTGATGT 57.735 29.630 7.93 8.22 34.83 3.06
248 249 9.485206 AGACTCAATGGAAAAATTCTTTTGATG 57.515 29.630 7.93 6.32 34.83 3.07
251 252 9.415544 CCTAGACTCAATGGAAAAATTCTTTTG 57.584 33.333 0.00 0.00 34.83 2.44
252 253 8.090831 GCCTAGACTCAATGGAAAAATTCTTTT 58.909 33.333 0.00 0.00 37.46 2.27
253 254 7.452813 AGCCTAGACTCAATGGAAAAATTCTTT 59.547 33.333 0.00 0.00 0.00 2.52
254 255 6.950619 AGCCTAGACTCAATGGAAAAATTCTT 59.049 34.615 0.00 0.00 0.00 2.52
255 256 6.488715 AGCCTAGACTCAATGGAAAAATTCT 58.511 36.000 0.00 0.00 0.00 2.40
256 257 6.601217 AGAGCCTAGACTCAATGGAAAAATTC 59.399 38.462 8.89 0.00 39.26 2.17
257 258 6.488715 AGAGCCTAGACTCAATGGAAAAATT 58.511 36.000 8.89 0.00 39.26 1.82
258 259 6.072199 AGAGCCTAGACTCAATGGAAAAAT 57.928 37.500 8.89 0.00 39.26 1.82
259 260 5.505181 AGAGCCTAGACTCAATGGAAAAA 57.495 39.130 8.89 0.00 39.26 1.94
260 261 5.505181 AAGAGCCTAGACTCAATGGAAAA 57.495 39.130 8.89 0.00 39.26 2.29
261 262 5.505181 AAAGAGCCTAGACTCAATGGAAA 57.495 39.130 8.89 0.00 39.26 3.13
262 263 5.505181 AAAAGAGCCTAGACTCAATGGAA 57.495 39.130 8.89 0.00 39.26 3.53
263 264 5.505181 AAAAAGAGCCTAGACTCAATGGA 57.495 39.130 8.89 0.00 39.26 3.41
289 290 6.619437 TCCTATCCTTCACATTTCATAGGGAA 59.381 38.462 0.00 0.00 35.50 3.97
290 291 6.150332 TCCTATCCTTCACATTTCATAGGGA 58.850 40.000 0.00 0.00 35.50 4.20
291 292 6.439636 TCCTATCCTTCACATTTCATAGGG 57.560 41.667 0.00 0.00 35.50 3.53
292 293 6.712547 GGTTCCTATCCTTCACATTTCATAGG 59.287 42.308 0.00 0.00 35.93 2.57
293 294 7.282585 TGGTTCCTATCCTTCACATTTCATAG 58.717 38.462 0.00 0.00 0.00 2.23
294 295 7.206789 TGGTTCCTATCCTTCACATTTCATA 57.793 36.000 0.00 0.00 0.00 2.15
295 296 6.078456 TGGTTCCTATCCTTCACATTTCAT 57.922 37.500 0.00 0.00 0.00 2.57
296 297 5.512942 TGGTTCCTATCCTTCACATTTCA 57.487 39.130 0.00 0.00 0.00 2.69
297 298 6.039829 GGATTGGTTCCTATCCTTCACATTTC 59.960 42.308 19.71 0.00 41.78 2.17
298 299 5.893824 GGATTGGTTCCTATCCTTCACATTT 59.106 40.000 19.71 0.00 41.78 2.32
299 300 5.449553 GGATTGGTTCCTATCCTTCACATT 58.550 41.667 19.71 0.00 41.78 2.71
300 301 5.053978 GGATTGGTTCCTATCCTTCACAT 57.946 43.478 19.71 0.00 41.78 3.21
301 302 4.503714 GGATTGGTTCCTATCCTTCACA 57.496 45.455 19.71 0.00 41.78 3.58
321 322 6.100424 GGGATGGATTCCTATTCCTACATAGG 59.900 46.154 15.18 0.00 45.32 2.57
322 323 6.905776 AGGGATGGATTCCTATTCCTACATAG 59.094 42.308 11.33 0.00 44.75 2.23
323 324 6.826727 AGGGATGGATTCCTATTCCTACATA 58.173 40.000 11.33 0.00 44.75 2.29
324 325 5.680327 AGGGATGGATTCCTATTCCTACAT 58.320 41.667 11.33 0.00 44.75 2.29
325 326 5.106631 AGGGATGGATTCCTATTCCTACA 57.893 43.478 11.33 0.00 44.75 2.74
326 327 8.855804 TTATAGGGATGGATTCCTATTCCTAC 57.144 38.462 17.65 6.34 42.03 3.18
327 328 9.280456 GTTTATAGGGATGGATTCCTATTCCTA 57.720 37.037 17.62 17.62 42.03 2.94
328 329 7.184753 GGTTTATAGGGATGGATTCCTATTCCT 59.815 40.741 11.17 15.34 42.03 3.36
329 330 7.036863 TGGTTTATAGGGATGGATTCCTATTCC 60.037 40.741 11.17 11.46 42.03 3.01
330 331 7.928873 TGGTTTATAGGGATGGATTCCTATTC 58.071 38.462 11.17 4.23 42.03 1.75
331 332 7.905144 TGGTTTATAGGGATGGATTCCTATT 57.095 36.000 11.17 0.00 42.03 1.73
332 333 7.905144 TTGGTTTATAGGGATGGATTCCTAT 57.095 36.000 10.77 10.77 45.39 2.57
333 334 7.202279 CCTTTGGTTTATAGGGATGGATTCCTA 60.202 40.741 3.95 0.00 44.75 2.94
334 335 6.412024 CCTTTGGTTTATAGGGATGGATTCCT 60.412 42.308 3.95 0.00 44.75 3.36
335 336 5.775195 CCTTTGGTTTATAGGGATGGATTCC 59.225 44.000 0.00 0.00 44.62 3.01
336 337 5.243954 GCCTTTGGTTTATAGGGATGGATTC 59.756 44.000 0.00 0.00 0.00 2.52
337 338 5.147767 GCCTTTGGTTTATAGGGATGGATT 58.852 41.667 0.00 0.00 0.00 3.01
338 339 4.449229 GGCCTTTGGTTTATAGGGATGGAT 60.449 45.833 0.00 0.00 0.00 3.41
339 340 3.117284 GGCCTTTGGTTTATAGGGATGGA 60.117 47.826 0.00 0.00 0.00 3.41
340 341 3.117131 AGGCCTTTGGTTTATAGGGATGG 60.117 47.826 0.00 0.00 0.00 3.51
341 342 4.141158 AGAGGCCTTTGGTTTATAGGGATG 60.141 45.833 6.77 0.00 0.00 3.51
342 343 4.055094 AGAGGCCTTTGGTTTATAGGGAT 58.945 43.478 6.77 0.00 0.00 3.85
343 344 3.470868 AGAGGCCTTTGGTTTATAGGGA 58.529 45.455 6.77 0.00 0.00 4.20
344 345 3.953542 AGAGGCCTTTGGTTTATAGGG 57.046 47.619 6.77 0.00 0.00 3.53
345 346 5.828328 CCTTTAGAGGCCTTTGGTTTATAGG 59.172 44.000 6.77 3.96 35.94 2.57
346 347 6.659824 TCCTTTAGAGGCCTTTGGTTTATAG 58.340 40.000 6.77 0.00 43.21 1.31
347 348 6.645884 TCCTTTAGAGGCCTTTGGTTTATA 57.354 37.500 6.77 0.00 43.21 0.98
348 349 5.530176 TCCTTTAGAGGCCTTTGGTTTAT 57.470 39.130 6.77 0.00 43.21 1.40
349 350 5.327737 TTCCTTTAGAGGCCTTTGGTTTA 57.672 39.130 6.77 0.00 43.21 2.01
350 351 3.895704 TCCTTTAGAGGCCTTTGGTTT 57.104 42.857 6.77 0.00 43.21 3.27
351 352 3.895704 TTCCTTTAGAGGCCTTTGGTT 57.104 42.857 6.77 0.00 43.21 3.67
352 353 3.895704 TTTCCTTTAGAGGCCTTTGGT 57.104 42.857 6.77 0.00 43.21 3.67
398 399 9.183368 GGTTCAGAGGAATTTCATAGAAATTCT 57.817 33.333 29.32 20.87 42.94 2.40
399 400 8.960591 TGGTTCAGAGGAATTTCATAGAAATTC 58.039 33.333 25.75 25.75 42.75 2.17
400 401 8.884124 TGGTTCAGAGGAATTTCATAGAAATT 57.116 30.769 15.33 15.33 35.05 1.82
401 402 8.884124 TTGGTTCAGAGGAATTTCATAGAAAT 57.116 30.769 0.00 0.00 35.05 2.17
402 403 8.704849 TTTGGTTCAGAGGAATTTCATAGAAA 57.295 30.769 0.00 0.00 35.05 2.52
403 404 7.394359 CCTTTGGTTCAGAGGAATTTCATAGAA 59.606 37.037 0.00 0.00 37.88 2.10
404 405 6.886459 CCTTTGGTTCAGAGGAATTTCATAGA 59.114 38.462 0.00 0.00 37.88 1.98
405 406 6.886459 TCCTTTGGTTCAGAGGAATTTCATAG 59.114 38.462 4.92 0.00 40.97 2.23
406 407 6.789268 TCCTTTGGTTCAGAGGAATTTCATA 58.211 36.000 4.92 0.00 40.97 2.15
407 408 5.644188 TCCTTTGGTTCAGAGGAATTTCAT 58.356 37.500 4.92 0.00 40.97 2.57
408 409 5.060427 TCCTTTGGTTCAGAGGAATTTCA 57.940 39.130 4.92 0.00 40.97 2.69
409 410 5.635417 CTCCTTTGGTTCAGAGGAATTTC 57.365 43.478 8.26 0.00 42.82 2.17
416 417 0.322906 GGGCCTCCTTTGGTTCAGAG 60.323 60.000 0.84 0.00 0.00 3.35
417 418 0.772124 AGGGCCTCCTTTGGTTCAGA 60.772 55.000 0.00 0.00 41.56 3.27
418 419 0.991920 TAGGGCCTCCTTTGGTTCAG 59.008 55.000 10.74 0.00 41.56 3.02
419 420 1.451449 TTAGGGCCTCCTTTGGTTCA 58.549 50.000 10.74 0.00 41.56 3.18
420 421 2.025321 TCATTAGGGCCTCCTTTGGTTC 60.025 50.000 10.74 0.00 41.56 3.62
421 422 2.000048 TCATTAGGGCCTCCTTTGGTT 59.000 47.619 10.74 0.00 41.56 3.67
422 423 1.681229 TCATTAGGGCCTCCTTTGGT 58.319 50.000 10.74 0.00 41.56 3.67
423 424 3.319031 AATCATTAGGGCCTCCTTTGG 57.681 47.619 10.74 0.00 41.56 3.28
424 425 3.823304 GCTAATCATTAGGGCCTCCTTTG 59.177 47.826 10.74 3.78 41.56 2.77
425 426 3.463329 TGCTAATCATTAGGGCCTCCTTT 59.537 43.478 10.74 0.52 41.56 3.11
426 427 3.056080 TGCTAATCATTAGGGCCTCCTT 58.944 45.455 10.74 0.00 41.56 3.36
427 428 2.706350 TGCTAATCATTAGGGCCTCCT 58.294 47.619 10.74 0.00 46.96 3.69
428 429 3.728385 ATGCTAATCATTAGGGCCTCC 57.272 47.619 10.74 0.00 33.80 4.30
429 430 4.655963 TCAATGCTAATCATTAGGGCCTC 58.344 43.478 10.74 0.00 43.21 4.70
430 431 4.729552 TCAATGCTAATCATTAGGGCCT 57.270 40.909 12.58 12.58 43.21 5.19
431 432 4.584325 TGTTCAATGCTAATCATTAGGGCC 59.416 41.667 6.55 0.00 43.21 5.80
432 433 5.772825 TGTTCAATGCTAATCATTAGGGC 57.227 39.130 6.55 0.00 43.21 5.19
433 434 6.154445 GCATGTTCAATGCTAATCATTAGGG 58.846 40.000 6.55 0.00 43.21 3.53
434 435 6.154445 GGCATGTTCAATGCTAATCATTAGG 58.846 40.000 6.55 0.00 43.21 2.69
435 436 6.015688 AGGGCATGTTCAATGCTAATCATTAG 60.016 38.462 9.92 0.00 43.21 1.73
436 437 5.834742 AGGGCATGTTCAATGCTAATCATTA 59.165 36.000 9.92 0.00 43.21 1.90
437 438 4.652421 AGGGCATGTTCAATGCTAATCATT 59.348 37.500 9.92 0.00 45.82 2.57
438 439 4.038763 CAGGGCATGTTCAATGCTAATCAT 59.961 41.667 9.92 0.00 44.02 2.45
439 440 3.382227 CAGGGCATGTTCAATGCTAATCA 59.618 43.478 9.92 0.00 44.02 2.57
440 441 3.633525 TCAGGGCATGTTCAATGCTAATC 59.366 43.478 9.92 0.00 44.02 1.75
441 442 3.634504 TCAGGGCATGTTCAATGCTAAT 58.365 40.909 9.92 0.00 44.02 1.73
447 448 3.196254 GGATTGTTCAGGGCATGTTCAAT 59.804 43.478 18.04 18.04 36.66 2.57
461 462 3.316283 TGAAAAGCATTGCGGATTGTTC 58.684 40.909 2.38 0.00 0.00 3.18
504 505 3.337358 TGTTGAACGCTGACATGATCAT 58.663 40.909 1.18 1.18 36.48 2.45
617 618 2.097791 GGAGTAGTAGTTGGTCAGCGAG 59.902 54.545 0.00 0.00 0.00 5.03
661 664 7.060600 TCAGATGTACTAATTCGCAAACAAG 57.939 36.000 0.00 0.00 0.00 3.16
664 667 7.910304 AGATTCAGATGTACTAATTCGCAAAC 58.090 34.615 0.00 0.00 0.00 2.93
676 681 7.771183 AGACAGAGAAAGAGATTCAGATGTAC 58.229 38.462 0.00 0.00 40.72 2.90
704 709 5.984695 ACTATTTTCCCTTTCTTGCTTCC 57.015 39.130 0.00 0.00 0.00 3.46
719 724 3.374745 CGGCGTACGGTCATACTATTTT 58.625 45.455 18.39 0.00 39.42 1.82
723 728 1.094650 TGCGGCGTACGGTCATACTA 61.095 55.000 18.39 0.00 44.51 1.82
724 729 2.409055 TGCGGCGTACGGTCATACT 61.409 57.895 18.39 0.00 44.51 2.12
725 730 2.102749 TGCGGCGTACGGTCATAC 59.897 61.111 18.39 0.00 44.51 2.39
808 813 8.139989 GGTTGCTGCATTCAAAATAGATAGAAT 58.860 33.333 1.84 0.00 0.00 2.40
809 814 7.122501 TGGTTGCTGCATTCAAAATAGATAGAA 59.877 33.333 1.84 0.00 0.00 2.10
810 815 6.602803 TGGTTGCTGCATTCAAAATAGATAGA 59.397 34.615 1.84 0.00 0.00 1.98
811 816 6.694411 GTGGTTGCTGCATTCAAAATAGATAG 59.306 38.462 1.84 0.00 0.00 2.08
813 818 5.413499 GTGGTTGCTGCATTCAAAATAGAT 58.587 37.500 1.84 0.00 0.00 1.98
989 1000 3.237741 CCGCCATCCCTCCCTCTC 61.238 72.222 0.00 0.00 0.00 3.20
990 1001 3.767268 TCCGCCATCCCTCCCTCT 61.767 66.667 0.00 0.00 0.00 3.69
1204 1220 4.957296 TCTGTAAATTATTCCGGAGAGGC 58.043 43.478 3.34 0.00 40.77 4.70
1211 1227 6.662414 TTGACAGCTCTGTAAATTATTCCG 57.338 37.500 2.07 0.00 45.05 4.30
1217 1233 5.163953 CGAACGATTGACAGCTCTGTAAATT 60.164 40.000 12.55 0.43 43.02 1.82
1225 1241 0.992802 GACCGAACGATTGACAGCTC 59.007 55.000 0.00 0.00 0.00 4.09
1232 1248 1.132199 CGAGACCGACCGAACGATTG 61.132 60.000 0.00 0.00 38.22 2.67
1253 1269 6.166984 ACACAAACAGGATCGATGATCTAT 57.833 37.500 0.54 0.00 38.91 1.98
1254 1270 5.598416 ACACAAACAGGATCGATGATCTA 57.402 39.130 0.54 0.00 38.91 1.98
1509 1530 7.324856 CACTGAATCTTCTATCTAATTCCGACG 59.675 40.741 0.00 0.00 0.00 5.12
1545 1571 3.181471 CGTAGCATCAGGTTCCTCTGAAT 60.181 47.826 0.00 0.00 45.54 2.57
1583 3300 3.438781 ACGCTTTCAGTTTTCTTGTGTGA 59.561 39.130 0.00 0.00 0.00 3.58
1586 3303 4.014847 TGACGCTTTCAGTTTTCTTGTG 57.985 40.909 0.00 0.00 0.00 3.33
1608 3325 0.663153 ACGACAGAGCAAAACAAGGC 59.337 50.000 0.00 0.00 0.00 4.35
1750 3469 5.585500 TGTAGAAATTGTGTCAGCGTTAC 57.415 39.130 0.00 0.00 0.00 2.50
1923 3644 8.327941 TGCAAGCAATCATATTATTAGGAGAC 57.672 34.615 0.00 0.00 0.00 3.36
1939 3660 4.202141 ACAAACTGTACACATGCAAGCAAT 60.202 37.500 0.00 0.00 0.00 3.56
2063 3799 1.002468 CCGCCACAACAAAACTGAGAG 60.002 52.381 0.00 0.00 0.00 3.20
2077 3813 4.044426 GAGATTGCAAATTAATCCGCCAC 58.956 43.478 1.71 0.32 35.62 5.01
2181 3917 2.193248 CTCCGGATTGAAGCCCCC 59.807 66.667 3.57 0.00 0.00 5.40
2202 3938 1.818060 GCACATACCTTGTTGATGCCA 59.182 47.619 0.00 0.00 36.00 4.92
2234 3970 2.971330 TGGAACAAACATCAAATGCCCT 59.029 40.909 0.00 0.00 31.92 5.19
2255 3991 3.463048 AAAAGGAGTGGGCAAGATCAT 57.537 42.857 0.00 0.00 0.00 2.45
2265 4001 6.370166 GTGTTATCTCAGAGAAAAAGGAGTGG 59.630 42.308 3.63 0.00 0.00 4.00
2292 4277 3.244044 CCATGAACCGTTCCCAATTTTGT 60.244 43.478 8.80 0.00 0.00 2.83
2349 4334 9.654663 ATCAGTAAGTAGTTTCTGAACAATACC 57.345 33.333 19.66 0.00 39.75 2.73
2547 4532 3.823873 TGAAGACGGCAACATAACCAAAT 59.176 39.130 0.00 0.00 0.00 2.32
2618 4603 3.195610 GGGCCTTTCTTTTGGACATTAGG 59.804 47.826 0.84 0.00 31.61 2.69
2760 4747 2.634940 AGTGCAGAGGAATACACACAGT 59.365 45.455 0.00 0.00 35.47 3.55
2833 4896 8.495949 GGCCTAAGAAAATAAGCAAAGAAAAAC 58.504 33.333 0.00 0.00 0.00 2.43
2943 5006 5.128663 TGCTCACTGTTTCAGCTACCATATA 59.871 40.000 0.00 0.00 34.37 0.86
3042 5105 7.558604 CACCTAAAAACATCAATCAATGGGAT 58.441 34.615 0.00 0.00 38.05 3.85
3049 5112 4.220382 CCCAGCACCTAAAAACATCAATCA 59.780 41.667 0.00 0.00 0.00 2.57
3050 5113 4.381932 CCCCAGCACCTAAAAACATCAATC 60.382 45.833 0.00 0.00 0.00 2.67
3211 5274 7.385778 TCAAATAATTTGGAACGGAGGTTAG 57.614 36.000 0.00 0.00 40.98 2.34
3408 5631 5.751243 TGAAGTTCAAGCTTTGTCCTAAC 57.249 39.130 2.20 0.00 0.00 2.34
3530 5753 5.775701 TGTAGAACTCCAGGCTATTCTATCC 59.224 44.000 10.87 3.54 36.37 2.59
3703 5926 7.441890 AGGTAGATCACATGTAATAGAGTCG 57.558 40.000 0.00 0.00 0.00 4.18
3736 5959 9.030452 AGCCCACAAAATATATTTGAAACACTA 57.970 29.630 11.42 0.00 33.83 2.74
3757 5980 3.244582 TGAGTACCTGAAAAGTAGCCCA 58.755 45.455 0.00 0.00 0.00 5.36
3761 5984 9.141400 GTAATGTCTTGAGTACCTGAAAAGTAG 57.859 37.037 0.00 0.00 0.00 2.57
3883 6107 3.005684 TCACGATGGCTTGAAGCAAAATT 59.994 39.130 19.89 0.00 44.75 1.82
3929 6153 3.744660 TCTGCTCAACCTTTTCCTTCTC 58.255 45.455 0.00 0.00 0.00 2.87
4021 6245 9.113838 ACATATTAGTAGCTCCATTTTCACAAG 57.886 33.333 0.00 0.00 0.00 3.16
4051 6275 6.992063 AAGCATATACAAGAAAGAGTGTGG 57.008 37.500 0.00 0.00 0.00 4.17
4331 6555 4.624015 CTGCACCTGTTCATTTGAATTGT 58.376 39.130 0.00 0.00 36.33 2.71
4405 6629 8.758633 TGTTAAAACGAAATCAGAACCAAAAA 57.241 26.923 0.00 0.00 0.00 1.94
4412 6636 7.796660 CACGAATCTGTTAAAACGAAATCAGAA 59.203 33.333 0.00 0.00 35.94 3.02
4425 6649 5.977635 ACATCATCCTCACGAATCTGTTAA 58.022 37.500 0.00 0.00 0.00 2.01
4451 6675 3.366719 GCAAGCGGAAGATAAGAAATGC 58.633 45.455 0.00 0.00 0.00 3.56
4588 6812 8.791327 TTGATCAGAATGTGCTACTTTGATAA 57.209 30.769 0.00 0.00 37.40 1.75
4669 6893 4.218417 GGAACAGCACAGAATATTGTTGGT 59.782 41.667 0.00 0.00 32.58 3.67
4779 7003 4.116782 TGCAATATTATCACCTGCCCAT 57.883 40.909 0.00 0.00 31.92 4.00
5129 7353 9.483916 TCACCTATACGGTTGTATGATAAAATG 57.516 33.333 0.00 0.00 46.37 2.32
5140 7364 3.367703 CCTCGTTTCACCTATACGGTTGT 60.368 47.826 0.00 0.00 46.37 3.32
5164 7388 1.752683 ACTCGCACTCTACCACCTAG 58.247 55.000 0.00 0.00 0.00 3.02
5509 7734 9.970395 GGTGATTCTTTTGATAATGCATCATAA 57.030 29.630 0.00 0.00 43.26 1.90
5542 7767 2.092753 GTCCCCTCTGATGCAAATCTCA 60.093 50.000 0.00 0.00 0.00 3.27
5734 7961 8.784043 GGTATGTTAAAGACCTTATAATGGCAG 58.216 37.037 0.00 0.00 0.00 4.85
5753 7980 4.469227 AGCATTCAGAGAGACTGGTATGTT 59.531 41.667 0.00 0.00 45.76 2.71
5787 8014 1.060698 GTAAGATGTGGAAACGAGCGC 59.939 52.381 0.00 0.00 0.00 5.92
5986 8213 1.523938 GCTGTGGAATACTCGGGGC 60.524 63.158 0.00 0.00 0.00 5.80
6257 8488 8.253113 TGTTGGTATGTTTAACTACTACTAGCC 58.747 37.037 0.00 0.00 0.00 3.93
6258 8489 9.643693 TTGTTGGTATGTTTAACTACTACTAGC 57.356 33.333 0.00 0.00 0.00 3.42
6448 8705 1.732809 GGCCGCTTCTTCTTGTAAGTC 59.267 52.381 0.00 0.00 0.00 3.01
7182 9440 5.748402 TGAAGATGGAGTTGCATCTGTTAT 58.252 37.500 15.51 1.70 38.10 1.89
7189 9447 2.089980 GCACTGAAGATGGAGTTGCAT 58.910 47.619 0.00 0.00 0.00 3.96
7292 9556 6.428771 GGATGCAAAAAGGTAGTACTGTACAA 59.571 38.462 19.27 0.00 0.00 2.41
7304 9568 3.552684 CGTCACAATGGATGCAAAAAGGT 60.553 43.478 0.00 0.00 0.00 3.50
7305 9569 2.988493 CGTCACAATGGATGCAAAAAGG 59.012 45.455 0.00 0.00 0.00 3.11
7325 9589 3.242284 CCACCATTTCACGTACAATAGCG 60.242 47.826 0.00 0.00 0.00 4.26
7347 9611 3.187637 TGCACATTAAAGCGAAGGTACAC 59.812 43.478 0.00 0.00 37.06 2.90
7356 9620 0.451783 GGGGAGTGCACATTAAAGCG 59.548 55.000 21.04 0.00 0.00 4.68
7358 9622 4.192317 GACTAGGGGAGTGCACATTAAAG 58.808 47.826 21.04 11.14 39.06 1.85
7360 9624 2.504175 GGACTAGGGGAGTGCACATTAA 59.496 50.000 21.04 0.00 45.51 1.40
7363 9627 2.609046 GGACTAGGGGAGTGCACAT 58.391 57.895 21.04 3.82 45.51 3.21
7382 9646 6.007703 TCAAGTTATCTACCACCCAAAAAGG 58.992 40.000 0.00 0.00 37.03 3.11
7383 9647 7.538575 CATCAAGTTATCTACCACCCAAAAAG 58.461 38.462 0.00 0.00 0.00 2.27
7384 9648 6.071616 GCATCAAGTTATCTACCACCCAAAAA 60.072 38.462 0.00 0.00 0.00 1.94
7385 9649 5.417580 GCATCAAGTTATCTACCACCCAAAA 59.582 40.000 0.00 0.00 0.00 2.44
7386 9650 4.947388 GCATCAAGTTATCTACCACCCAAA 59.053 41.667 0.00 0.00 0.00 3.28
7387 9651 4.523083 GCATCAAGTTATCTACCACCCAA 58.477 43.478 0.00 0.00 0.00 4.12
7388 9652 3.431626 CGCATCAAGTTATCTACCACCCA 60.432 47.826 0.00 0.00 0.00 4.51
7389 9653 3.131396 CGCATCAAGTTATCTACCACCC 58.869 50.000 0.00 0.00 0.00 4.61
7390 9654 3.555956 CACGCATCAAGTTATCTACCACC 59.444 47.826 0.00 0.00 0.00 4.61
7391 9655 4.430007 TCACGCATCAAGTTATCTACCAC 58.570 43.478 0.00 0.00 0.00 4.16
7392 9656 4.441495 CCTCACGCATCAAGTTATCTACCA 60.441 45.833 0.00 0.00 0.00 3.25
7393 9657 4.051922 CCTCACGCATCAAGTTATCTACC 58.948 47.826 0.00 0.00 0.00 3.18
7394 9658 4.683832 ACCTCACGCATCAAGTTATCTAC 58.316 43.478 0.00 0.00 0.00 2.59
7395 9659 5.339008 AACCTCACGCATCAAGTTATCTA 57.661 39.130 0.00 0.00 0.00 1.98
7396 9660 3.895232 ACCTCACGCATCAAGTTATCT 57.105 42.857 0.00 0.00 0.00 1.98
7397 9661 3.000322 CGAACCTCACGCATCAAGTTATC 60.000 47.826 0.00 0.00 0.00 1.75
7398 9662 2.930040 CGAACCTCACGCATCAAGTTAT 59.070 45.455 0.00 0.00 0.00 1.89
7399 9663 2.333926 CGAACCTCACGCATCAAGTTA 58.666 47.619 0.00 0.00 0.00 2.24
7400 9664 1.148310 CGAACCTCACGCATCAAGTT 58.852 50.000 0.00 0.00 0.00 2.66
7401 9665 2.827604 CGAACCTCACGCATCAAGT 58.172 52.632 0.00 0.00 0.00 3.16
7409 9673 1.156736 AAAATGGAGCGAACCTCACG 58.843 50.000 0.00 0.00 42.62 4.35
7426 9690 8.795513 TGCTCAGATGTTCAAATGATCTAAAAA 58.204 29.630 0.00 0.00 0.00 1.94
7427 9691 8.339344 TGCTCAGATGTTCAAATGATCTAAAA 57.661 30.769 0.00 0.00 0.00 1.52
7428 9692 7.414873 GCTGCTCAGATGTTCAAATGATCTAAA 60.415 37.037 0.29 0.00 0.00 1.85
7429 9693 6.037940 GCTGCTCAGATGTTCAAATGATCTAA 59.962 38.462 0.29 0.00 0.00 2.10
7430 9694 5.526479 GCTGCTCAGATGTTCAAATGATCTA 59.474 40.000 0.29 0.00 0.00 1.98
7431 9695 4.335874 GCTGCTCAGATGTTCAAATGATCT 59.664 41.667 0.29 0.00 0.00 2.75
7432 9696 4.335874 AGCTGCTCAGATGTTCAAATGATC 59.664 41.667 0.00 0.00 0.00 2.92
7433 9697 4.270834 AGCTGCTCAGATGTTCAAATGAT 58.729 39.130 0.00 0.00 0.00 2.45
7434 9698 3.682696 AGCTGCTCAGATGTTCAAATGA 58.317 40.909 0.00 0.00 0.00 2.57
7435 9699 3.181499 GGAGCTGCTCAGATGTTCAAATG 60.181 47.826 28.95 0.00 31.08 2.32
7436 9700 3.015327 GGAGCTGCTCAGATGTTCAAAT 58.985 45.455 28.95 0.00 31.08 2.32
7437 9701 2.430465 GGAGCTGCTCAGATGTTCAAA 58.570 47.619 28.95 0.00 31.08 2.69
7438 9702 1.339438 GGGAGCTGCTCAGATGTTCAA 60.339 52.381 28.95 0.00 31.08 2.69
7439 9703 0.251354 GGGAGCTGCTCAGATGTTCA 59.749 55.000 28.95 0.00 31.08 3.18
7440 9704 0.251354 TGGGAGCTGCTCAGATGTTC 59.749 55.000 28.95 11.10 31.08 3.18
7441 9705 2.380365 TGGGAGCTGCTCAGATGTT 58.620 52.632 28.95 0.00 31.08 2.71
7442 9706 4.142045 TGGGAGCTGCTCAGATGT 57.858 55.556 28.95 0.00 31.08 3.06
7447 9711 0.467844 TTTTTGCTGGGAGCTGCTCA 60.468 50.000 28.95 11.15 42.97 4.26
7448 9712 2.344535 TTTTTGCTGGGAGCTGCTC 58.655 52.632 21.17 21.17 42.97 4.26
7449 9713 4.605064 TTTTTGCTGGGAGCTGCT 57.395 50.000 0.00 0.00 42.97 4.24
7468 9732 9.945904 TGTTCTAACCCTATTTGTTTTGTTTTT 57.054 25.926 0.00 0.00 0.00 1.94
7469 9733 9.594478 CTGTTCTAACCCTATTTGTTTTGTTTT 57.406 29.630 0.00 0.00 0.00 2.43
7470 9734 8.755028 ACTGTTCTAACCCTATTTGTTTTGTTT 58.245 29.630 0.00 0.00 0.00 2.83
7471 9735 8.194769 CACTGTTCTAACCCTATTTGTTTTGTT 58.805 33.333 0.00 0.00 0.00 2.83
7472 9736 7.683463 GCACTGTTCTAACCCTATTTGTTTTGT 60.683 37.037 0.00 0.00 0.00 2.83
7473 9737 6.640907 GCACTGTTCTAACCCTATTTGTTTTG 59.359 38.462 0.00 0.00 0.00 2.44
7474 9738 6.514376 CGCACTGTTCTAACCCTATTTGTTTT 60.514 38.462 0.00 0.00 0.00 2.43
7475 9739 5.048991 CGCACTGTTCTAACCCTATTTGTTT 60.049 40.000 0.00 0.00 0.00 2.83
7476 9740 4.454504 CGCACTGTTCTAACCCTATTTGTT 59.545 41.667 0.00 0.00 0.00 2.83
7477 9741 4.000988 CGCACTGTTCTAACCCTATTTGT 58.999 43.478 0.00 0.00 0.00 2.83
7478 9742 4.000988 ACGCACTGTTCTAACCCTATTTG 58.999 43.478 0.00 0.00 0.00 2.32
7479 9743 4.000988 CACGCACTGTTCTAACCCTATTT 58.999 43.478 0.00 0.00 0.00 1.40
7480 9744 3.259876 TCACGCACTGTTCTAACCCTATT 59.740 43.478 0.00 0.00 0.00 1.73
7481 9745 2.829720 TCACGCACTGTTCTAACCCTAT 59.170 45.455 0.00 0.00 0.00 2.57
7482 9746 2.241160 TCACGCACTGTTCTAACCCTA 58.759 47.619 0.00 0.00 0.00 3.53
7483 9747 1.045407 TCACGCACTGTTCTAACCCT 58.955 50.000 0.00 0.00 0.00 4.34
7484 9748 1.529865 GTTCACGCACTGTTCTAACCC 59.470 52.381 0.00 0.00 0.00 4.11
7485 9749 2.206750 TGTTCACGCACTGTTCTAACC 58.793 47.619 0.00 0.00 0.00 2.85
7486 9750 2.864343 ACTGTTCACGCACTGTTCTAAC 59.136 45.455 0.00 0.00 0.00 2.34
7487 9751 3.173668 ACTGTTCACGCACTGTTCTAA 57.826 42.857 0.00 0.00 0.00 2.10
7488 9752 2.882927 ACTGTTCACGCACTGTTCTA 57.117 45.000 0.00 0.00 0.00 2.10
7489 9753 2.882927 TACTGTTCACGCACTGTTCT 57.117 45.000 0.00 0.00 31.81 3.01
7490 9754 3.062909 TGTTTACTGTTCACGCACTGTTC 59.937 43.478 0.00 0.00 31.81 3.18
7491 9755 3.004171 TGTTTACTGTTCACGCACTGTT 58.996 40.909 0.00 0.00 31.81 3.16
7492 9756 2.623535 TGTTTACTGTTCACGCACTGT 58.376 42.857 0.00 0.00 33.75 3.55
7493 9757 3.878086 ATGTTTACTGTTCACGCACTG 57.122 42.857 0.00 0.00 0.00 3.66
7494 9758 4.893424 AAATGTTTACTGTTCACGCACT 57.107 36.364 0.00 0.00 0.00 4.40
7495 9759 5.942325 AAAAATGTTTACTGTTCACGCAC 57.058 34.783 0.00 0.00 0.00 5.34
7496 9760 8.775527 TCTATAAAAATGTTTACTGTTCACGCA 58.224 29.630 0.00 0.00 32.04 5.24
7497 9761 9.047871 GTCTATAAAAATGTTTACTGTTCACGC 57.952 33.333 0.00 0.00 32.04 5.34
7498 9762 9.537848 GGTCTATAAAAATGTTTACTGTTCACG 57.462 33.333 0.00 0.00 32.04 4.35
7499 9763 9.836076 GGGTCTATAAAAATGTTTACTGTTCAC 57.164 33.333 0.00 0.00 32.04 3.18
7500 9764 9.016438 GGGGTCTATAAAAATGTTTACTGTTCA 57.984 33.333 0.00 0.00 32.04 3.18
7501 9765 9.016438 TGGGGTCTATAAAAATGTTTACTGTTC 57.984 33.333 0.00 0.00 32.04 3.18
7502 9766 8.943594 TGGGGTCTATAAAAATGTTTACTGTT 57.056 30.769 0.00 0.00 32.04 3.16
7503 9767 8.943594 TTGGGGTCTATAAAAATGTTTACTGT 57.056 30.769 0.00 0.00 32.04 3.55
7541 9805 0.534877 TGAGCAGCTCTCGGCAAAAA 60.535 50.000 23.15 0.00 44.86 1.94
7542 9806 0.952497 CTGAGCAGCTCTCGGCAAAA 60.952 55.000 23.15 0.00 44.86 2.44
7543 9807 1.375140 CTGAGCAGCTCTCGGCAAA 60.375 57.895 23.15 0.00 44.86 3.68
7544 9808 1.611474 ATCTGAGCAGCTCTCGGCAA 61.611 55.000 23.15 0.68 45.76 4.52
7545 9809 2.056815 ATCTGAGCAGCTCTCGGCA 61.057 57.895 23.15 2.15 45.76 5.69
7546 9810 1.592131 CATCTGAGCAGCTCTCGGC 60.592 63.158 23.15 0.00 45.76 5.54
7548 9812 1.135170 TGAACATCTGAGCAGCTCTCG 60.135 52.381 23.15 13.93 44.86 4.04
7549 9813 2.669300 TGAACATCTGAGCAGCTCTC 57.331 50.000 23.15 11.54 42.23 3.20
7550 9814 3.413846 TTTGAACATCTGAGCAGCTCT 57.586 42.857 23.15 1.24 0.00 4.09
7551 9815 3.688185 TCATTTGAACATCTGAGCAGCTC 59.312 43.478 16.21 16.21 0.00 4.09
7552 9816 3.682696 TCATTTGAACATCTGAGCAGCT 58.317 40.909 0.00 0.00 0.00 4.24
7553 9817 4.634184 ATCATTTGAACATCTGAGCAGC 57.366 40.909 0.00 0.00 0.00 5.25
7554 9818 6.617879 TCAAATCATTTGAACATCTGAGCAG 58.382 36.000 10.55 0.00 45.94 4.24
7555 9819 6.578163 TCAAATCATTTGAACATCTGAGCA 57.422 33.333 10.55 0.00 45.94 4.26
7567 9831 9.157259 GGTTCGTTTCAATTTTCAAATCATTTG 57.843 29.630 3.46 3.46 41.96 2.32
7568 9832 9.108284 AGGTTCGTTTCAATTTTCAAATCATTT 57.892 25.926 0.00 0.00 0.00 2.32
7569 9833 8.661352 AGGTTCGTTTCAATTTTCAAATCATT 57.339 26.923 0.00 0.00 0.00 2.57
7570 9834 7.925483 TGAGGTTCGTTTCAATTTTCAAATCAT 59.075 29.630 0.00 0.00 0.00 2.45
7571 9835 7.221838 GTGAGGTTCGTTTCAATTTTCAAATCA 59.778 33.333 0.00 0.00 0.00 2.57
7572 9836 7.555582 GTGAGGTTCGTTTCAATTTTCAAATC 58.444 34.615 0.00 0.00 0.00 2.17
7573 9837 6.198216 CGTGAGGTTCGTTTCAATTTTCAAAT 59.802 34.615 0.00 0.00 0.00 2.32
7574 9838 5.513495 CGTGAGGTTCGTTTCAATTTTCAAA 59.487 36.000 0.00 0.00 0.00 2.69
7575 9839 5.031578 CGTGAGGTTCGTTTCAATTTTCAA 58.968 37.500 0.00 0.00 0.00 2.69
7576 9840 4.593157 CGTGAGGTTCGTTTCAATTTTCA 58.407 39.130 0.00 0.00 0.00 2.69
7577 9841 3.420904 GCGTGAGGTTCGTTTCAATTTTC 59.579 43.478 0.00 0.00 0.00 2.29
7578 9842 3.181495 TGCGTGAGGTTCGTTTCAATTTT 60.181 39.130 0.00 0.00 0.00 1.82
7579 9843 2.356382 TGCGTGAGGTTCGTTTCAATTT 59.644 40.909 0.00 0.00 0.00 1.82
7580 9844 1.944024 TGCGTGAGGTTCGTTTCAATT 59.056 42.857 0.00 0.00 0.00 2.32
7581 9845 1.588674 TGCGTGAGGTTCGTTTCAAT 58.411 45.000 0.00 0.00 0.00 2.57
7582 9846 1.529438 GATGCGTGAGGTTCGTTTCAA 59.471 47.619 0.00 0.00 0.00 2.69
7583 9847 1.144969 GATGCGTGAGGTTCGTTTCA 58.855 50.000 0.00 0.00 0.00 2.69
7584 9848 1.144969 TGATGCGTGAGGTTCGTTTC 58.855 50.000 0.00 0.00 0.00 2.78
7585 9849 1.588674 TTGATGCGTGAGGTTCGTTT 58.411 45.000 0.00 0.00 0.00 3.60
7586 9850 1.588674 TTTGATGCGTGAGGTTCGTT 58.411 45.000 0.00 0.00 0.00 3.85
7587 9851 1.808411 ATTTGATGCGTGAGGTTCGT 58.192 45.000 0.00 0.00 0.00 3.85
7588 9852 2.900122 AATTTGATGCGTGAGGTTCG 57.100 45.000 0.00 0.00 0.00 3.95
7589 9853 5.741388 AGATAATTTGATGCGTGAGGTTC 57.259 39.130 0.00 0.00 0.00 3.62
7590 9854 6.992123 TGATAGATAATTTGATGCGTGAGGTT 59.008 34.615 0.00 0.00 0.00 3.50
7591 9855 6.425114 GTGATAGATAATTTGATGCGTGAGGT 59.575 38.462 0.00 0.00 0.00 3.85
7592 9856 6.424812 TGTGATAGATAATTTGATGCGTGAGG 59.575 38.462 0.00 0.00 0.00 3.86
7593 9857 7.412137 TGTGATAGATAATTTGATGCGTGAG 57.588 36.000 0.00 0.00 0.00 3.51
7594 9858 7.784633 TTGTGATAGATAATTTGATGCGTGA 57.215 32.000 0.00 0.00 0.00 4.35
7595 9859 8.839947 TTTTGTGATAGATAATTTGATGCGTG 57.160 30.769 0.00 0.00 0.00 5.34
7596 9860 9.507280 CTTTTTGTGATAGATAATTTGATGCGT 57.493 29.630 0.00 0.00 0.00 5.24
7597 9861 9.720667 TCTTTTTGTGATAGATAATTTGATGCG 57.279 29.630 0.00 0.00 0.00 4.73
7606 9870 8.792633 CCCAACAGTTCTTTTTGTGATAGATAA 58.207 33.333 0.00 0.00 0.00 1.75
7607 9871 7.094377 GCCCAACAGTTCTTTTTGTGATAGATA 60.094 37.037 0.00 0.00 0.00 1.98
7608 9872 6.294731 GCCCAACAGTTCTTTTTGTGATAGAT 60.295 38.462 0.00 0.00 0.00 1.98
7609 9873 5.009610 GCCCAACAGTTCTTTTTGTGATAGA 59.990 40.000 0.00 0.00 0.00 1.98
7610 9874 5.222631 GCCCAACAGTTCTTTTTGTGATAG 58.777 41.667 0.00 0.00 0.00 2.08
7611 9875 5.195001 GCCCAACAGTTCTTTTTGTGATA 57.805 39.130 0.00 0.00 0.00 2.15
7612 9876 4.058721 GCCCAACAGTTCTTTTTGTGAT 57.941 40.909 0.00 0.00 0.00 3.06
7613 9877 3.518634 GCCCAACAGTTCTTTTTGTGA 57.481 42.857 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.