Multiple sequence alignment - TraesCS5A01G145100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G145100 chr5A 100.000 4868 0 0 1 4868 321027135 321022268 0.000000e+00 8990.0
1 TraesCS5A01G145100 chr5A 97.700 913 19 2 1898 2809 64360025 64360936 0.000000e+00 1568.0
2 TraesCS5A01G145100 chr5A 98.529 68 1 0 4484 4551 321022618 321022551 2.380000e-23 121.0
3 TraesCS5A01G145100 chr5A 98.529 68 1 0 4518 4585 321022652 321022585 2.380000e-23 121.0
4 TraesCS5A01G145100 chr5B 91.058 1219 70 18 2860 4048 271145171 271143962 0.000000e+00 1611.0
5 TraesCS5A01G145100 chr5B 88.288 666 50 17 1244 1900 271145808 271145162 0.000000e+00 773.0
6 TraesCS5A01G145100 chr5B 82.957 798 87 25 2 780 271147197 271146430 0.000000e+00 675.0
7 TraesCS5A01G145100 chr5B 95.775 355 8 6 819 1173 271146319 271145972 2.540000e-157 566.0
8 TraesCS5A01G145100 chr5B 88.916 415 30 6 4105 4517 271143962 271143562 9.410000e-137 497.0
9 TraesCS5A01G145100 chr5B 90.909 319 20 4 4553 4868 271143594 271143282 2.100000e-113 420.0
10 TraesCS5A01G145100 chr5D 89.992 1209 72 25 2854 4044 233736879 233738056 0.000000e+00 1517.0
11 TraesCS5A01G145100 chr5D 88.972 535 41 9 1 534 233724880 233725397 0.000000e+00 645.0
12 TraesCS5A01G145100 chr5D 89.918 486 38 6 4042 4517 233738102 233738586 2.490000e-172 616.0
13 TraesCS5A01G145100 chr5D 91.051 447 27 10 870 1304 233735836 233736281 4.200000e-165 592.0
14 TraesCS5A01G145100 chr5D 92.453 318 18 2 4552 4868 233738553 233738865 2.670000e-122 449.0
15 TraesCS5A01G145100 chr5D 91.827 208 14 2 1474 1679 233736427 233736633 2.220000e-73 287.0
16 TraesCS5A01G145100 chr5D 94.737 171 8 1 1731 1900 233736724 233736894 1.040000e-66 265.0
17 TraesCS5A01G145100 chr5D 91.071 112 5 2 1305 1413 233736321 233736430 3.930000e-31 147.0
18 TraesCS5A01G145100 chr5D 88.496 113 10 2 663 775 233727169 233727278 3.060000e-27 134.0
19 TraesCS5A01G145100 chr3B 92.982 513 35 1 1903 2414 236550381 236550893 0.000000e+00 747.0
20 TraesCS5A01G145100 chr3B 88.529 401 45 1 2415 2815 236616335 236616734 7.330000e-133 484.0
21 TraesCS5A01G145100 chr4D 85.903 454 61 3 1934 2387 259908560 259909010 9.480000e-132 481.0
22 TraesCS5A01G145100 chr4D 93.878 98 6 0 1015 1112 103233168 103233265 1.090000e-31 148.0
23 TraesCS5A01G145100 chr1B 95.517 290 13 0 2375 2664 24109761 24109472 9.540000e-127 464.0
24 TraesCS5A01G145100 chr1B 92.880 309 21 1 1902 2210 22927873 22928180 9.610000e-122 448.0
25 TraesCS5A01G145100 chr1B 96.053 76 3 0 2739 2814 24109891 24109966 1.840000e-24 124.0
26 TraesCS5A01G145100 chr3D 75.688 436 92 9 1898 2326 469149662 469149234 6.390000e-49 206.0
27 TraesCS5A01G145100 chr3D 75.291 429 92 10 2394 2814 469149198 469148776 4.970000e-45 193.0
28 TraesCS5A01G145100 chr3D 79.646 226 43 3 2538 2762 573075702 573075479 5.040000e-35 159.0
29 TraesCS5A01G145100 chr7A 100.000 90 0 0 1898 1987 612537873 612537962 3.010000e-37 167.0
30 TraesCS5A01G145100 chr4B 95.918 98 4 0 1015 1112 147365947 147366044 5.040000e-35 159.0
31 TraesCS5A01G145100 chr4A 95.918 98 4 0 1015 1112 471933266 471933169 5.040000e-35 159.0
32 TraesCS5A01G145100 chr1D 93.000 100 7 0 1899 1998 18711700 18711601 3.930000e-31 147.0
33 TraesCS5A01G145100 chr6B 75.897 195 38 8 2626 2815 698413859 698413669 1.870000e-14 91.6
34 TraesCS5A01G145100 chr6B 76.042 192 37 8 2626 2812 698832495 698832682 1.870000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G145100 chr5A 321022268 321027135 4867 True 8990.000000 8990 100.000000 1 4868 1 chr5A.!!$R1 4867
1 TraesCS5A01G145100 chr5A 64360025 64360936 911 False 1568.000000 1568 97.700000 1898 2809 1 chr5A.!!$F1 911
2 TraesCS5A01G145100 chr5B 271143282 271147197 3915 True 757.000000 1611 89.650500 2 4868 6 chr5B.!!$R1 4866
3 TraesCS5A01G145100 chr5D 233735836 233738865 3029 False 553.285714 1517 91.578429 870 4868 7 chr5D.!!$F2 3998
4 TraesCS5A01G145100 chr5D 233724880 233727278 2398 False 389.500000 645 88.734000 1 775 2 chr5D.!!$F1 774
5 TraesCS5A01G145100 chr3B 236550381 236550893 512 False 747.000000 747 92.982000 1903 2414 1 chr3B.!!$F1 511

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
220 226 0.119358 AACCCTAGTCCTCCCTTGCT 59.881 55.0 0.00 0.0 0.00 3.91 F
1243 3035 0.314935 GTCAATGTGGTTGCTGGTGG 59.685 55.0 0.00 0.0 37.74 4.61 F
1886 3845 0.521735 TGGACTCGTGAGTGATGACG 59.478 55.0 7.35 0.0 42.66 4.35 F
2810 4771 0.039437 GCGTTCTGTGGAGAGTTCGA 60.039 55.0 0.00 0.0 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1350 3255 0.170339 CACGTGCTACTCCGACATCA 59.830 55.0 0.82 0.0 0.00 3.07 R
2771 4732 0.739112 GAGAGGCGAACAGAAGCAGG 60.739 60.0 0.00 0.0 34.54 4.85 R
3679 5676 0.831288 TGGATGGCAAAACAGGTGGG 60.831 55.0 0.00 0.0 0.00 4.61 R
4138 6193 0.831307 AGGGATTGTAAGGCTCGGAC 59.169 55.0 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.553904 GGGTCTGGGCCATGATGAATAG 60.554 54.545 6.72 0.00 0.00 1.73
67 68 1.818674 AGGCGGTCCTTGCAAAATTAG 59.181 47.619 0.00 0.00 40.66 1.73
68 69 1.544246 GGCGGTCCTTGCAAAATTAGT 59.456 47.619 0.00 0.00 0.00 2.24
77 80 6.638468 GTCCTTGCAAAATTAGTGTCTTCAAG 59.362 38.462 0.00 0.00 0.00 3.02
96 99 6.446781 TCAAGAACACCGTTAGGATAGTAG 57.553 41.667 0.00 0.00 41.02 2.57
97 100 5.359009 TCAAGAACACCGTTAGGATAGTAGG 59.641 44.000 0.00 0.00 41.02 3.18
98 101 5.121380 AGAACACCGTTAGGATAGTAGGA 57.879 43.478 0.00 0.00 41.02 2.94
99 102 5.131784 AGAACACCGTTAGGATAGTAGGAG 58.868 45.833 0.00 0.00 41.02 3.69
100 103 4.516652 ACACCGTTAGGATAGTAGGAGT 57.483 45.455 0.00 0.00 41.02 3.85
101 104 5.636903 ACACCGTTAGGATAGTAGGAGTA 57.363 43.478 0.00 0.00 41.02 2.59
146 150 0.536687 ACGAGTCCGACCAAGTGAGA 60.537 55.000 0.00 0.00 39.50 3.27
156 160 1.202976 ACCAAGTGAGAAGCTGCCAAT 60.203 47.619 0.00 0.00 0.00 3.16
197 202 2.833794 TGGTGAAACAGAAGGAAGTCG 58.166 47.619 0.00 0.00 39.98 4.18
202 208 2.910688 AACAGAAGGAAGTCGCAGAA 57.089 45.000 0.00 0.00 39.69 3.02
220 226 0.119358 AACCCTAGTCCTCCCTTGCT 59.881 55.000 0.00 0.00 0.00 3.91
225 231 1.902508 CTAGTCCTCCCTTGCTGTTGA 59.097 52.381 0.00 0.00 0.00 3.18
231 237 0.473755 TCCCTTGCTGTTGAGCTCAA 59.526 50.000 25.16 25.16 46.39 3.02
250 256 8.038492 AGCTCAATTATCTTTTCTCAAGACAC 57.962 34.615 0.00 0.00 0.00 3.67
252 258 7.627300 GCTCAATTATCTTTTCTCAAGACACCC 60.627 40.741 0.00 0.00 0.00 4.61
285 291 9.601810 ACTTCCTTTTATATTTCTTTGAACCCT 57.398 29.630 0.00 0.00 0.00 4.34
305 312 5.046087 ACCCTACCAAAATTACGAACTAGCT 60.046 40.000 0.00 0.00 0.00 3.32
323 330 4.541973 AGCTATGACAGATCACACACAA 57.458 40.909 0.00 0.00 37.79 3.33
358 365 7.280356 ACTTGAATACACCCATAATGTAGGTC 58.720 38.462 0.00 0.00 36.04 3.85
386 393 3.184003 GCGCGACTAACCCGGTTC 61.184 66.667 12.10 0.00 0.00 3.62
404 411 4.102649 GGTTCCAACAAAAGACAAGAACG 58.897 43.478 0.00 0.00 34.40 3.95
419 426 6.018669 AGACAAGAACGTTCTTTCATGAACTC 60.019 38.462 34.94 19.79 44.70 3.01
426 433 5.530915 ACGTTCTTTCATGAACTCCAATGAA 59.469 36.000 7.89 0.00 42.82 2.57
490 497 1.289066 CTGACGAAGGCCAACGAGA 59.711 57.895 24.10 11.23 0.00 4.04
499 506 4.094294 CGAAGGCCAACGAGATTATTTTCA 59.906 41.667 14.83 0.00 0.00 2.69
519 526 4.507710 TCATGTAATCTGAGGAGCAACAC 58.492 43.478 0.00 0.00 0.00 3.32
534 541 4.401925 AGCAACACTATCCTTTCTTTGCT 58.598 39.130 0.16 0.16 42.50 3.91
556 563 4.890088 TGCTGGTTTGTCTAGTTTACGAT 58.110 39.130 0.00 0.00 0.00 3.73
562 569 6.425721 TGGTTTGTCTAGTTTACGATGAAAGG 59.574 38.462 0.00 0.00 0.00 3.11
592 2273 7.016361 GTATGAACATACAAGATGGAACACC 57.984 40.000 16.83 0.00 41.93 4.16
637 2318 9.965748 TCAAAACTTTTGAAATCAACGATTTTC 57.034 25.926 13.50 0.00 41.56 2.29
638 2319 9.971744 CAAAACTTTTGAAATCAACGATTTTCT 57.028 25.926 8.35 0.00 41.56 2.52
746 2438 1.218704 AGATGGGCTAACATGGGCAAT 59.781 47.619 0.00 0.00 0.00 3.56
748 2440 2.363306 TGGGCTAACATGGGCAATAG 57.637 50.000 0.00 0.00 0.00 1.73
776 2468 1.691434 CAGCTATCACCTTCCCCTCTC 59.309 57.143 0.00 0.00 0.00 3.20
777 2469 1.578215 AGCTATCACCTTCCCCTCTCT 59.422 52.381 0.00 0.00 0.00 3.10
778 2470 1.967779 GCTATCACCTTCCCCTCTCTC 59.032 57.143 0.00 0.00 0.00 3.20
779 2471 2.425683 GCTATCACCTTCCCCTCTCTCT 60.426 54.545 0.00 0.00 0.00 3.10
780 2472 2.470057 ATCACCTTCCCCTCTCTCTC 57.530 55.000 0.00 0.00 0.00 3.20
781 2473 1.388174 TCACCTTCCCCTCTCTCTCT 58.612 55.000 0.00 0.00 0.00 3.10
782 2474 1.719378 TCACCTTCCCCTCTCTCTCTT 59.281 52.381 0.00 0.00 0.00 2.85
783 2475 2.107366 CACCTTCCCCTCTCTCTCTTC 58.893 57.143 0.00 0.00 0.00 2.87
784 2476 2.007636 ACCTTCCCCTCTCTCTCTTCT 58.992 52.381 0.00 0.00 0.00 2.85
785 2477 2.024369 ACCTTCCCCTCTCTCTCTTCTC 60.024 54.545 0.00 0.00 0.00 2.87
786 2478 2.666317 CTTCCCCTCTCTCTCTTCTCC 58.334 57.143 0.00 0.00 0.00 3.71
787 2479 0.548989 TCCCCTCTCTCTCTTCTCCG 59.451 60.000 0.00 0.00 0.00 4.63
790 2482 1.211949 CCCTCTCTCTCTTCTCCGACT 59.788 57.143 0.00 0.00 0.00 4.18
803 2495 1.734477 CCGACTCGGTGCTCAACTG 60.734 63.158 9.51 0.00 42.73 3.16
805 2497 0.597637 CGACTCGGTGCTCAACTGTT 60.598 55.000 0.00 0.00 36.45 3.16
806 2498 0.861837 GACTCGGTGCTCAACTGTTG 59.138 55.000 14.24 14.24 36.45 3.33
807 2499 1.160329 ACTCGGTGCTCAACTGTTGC 61.160 55.000 15.52 5.81 36.45 4.17
808 2500 1.845809 CTCGGTGCTCAACTGTTGCC 61.846 60.000 15.52 9.80 36.45 4.52
809 2501 1.893808 CGGTGCTCAACTGTTGCCT 60.894 57.895 15.52 0.00 0.00 4.75
810 2502 1.656441 GGTGCTCAACTGTTGCCTG 59.344 57.895 15.52 9.13 0.00 4.85
812 2504 1.152902 TGCTCAACTGTTGCCTGCT 60.153 52.632 22.71 0.00 0.00 4.24
813 2505 1.285023 GCTCAACTGTTGCCTGCTG 59.715 57.895 15.52 3.18 0.00 4.41
868 2633 3.064987 CTGCTGATGCTGCTTGGGC 62.065 63.158 0.00 2.11 40.48 5.36
1169 2934 9.045223 GCCTAATTTCTGTTCAATTTTCACTTT 57.955 29.630 0.00 0.00 0.00 2.66
1181 2973 6.479660 TCAATTTTCACTTTCACAGGAATTGC 59.520 34.615 0.00 0.00 31.93 3.56
1186 2978 4.036734 TCACTTTCACAGGAATTGCTTGTC 59.963 41.667 0.00 0.00 34.14 3.18
1188 2980 4.037208 ACTTTCACAGGAATTGCTTGTCAG 59.963 41.667 0.00 3.63 34.14 3.51
1189 2981 3.243501 TTTCACAGGAATTGCTTGTCAGC 60.244 43.478 0.00 0.00 38.58 4.26
1190 2982 5.469763 TTTCACAGGAATTGCTTGTCAGCT 61.470 41.667 0.00 0.00 38.76 4.24
1192 2984 8.826241 TTTCACAGGAATTGCTTGTCAGCTTG 62.826 42.308 0.00 0.00 38.76 4.01
1198 2990 3.557207 GCTTGTCAGCTTGTGGTTG 57.443 52.632 0.00 0.00 43.51 3.77
1199 2991 0.740737 GCTTGTCAGCTTGTGGTTGT 59.259 50.000 0.00 0.00 43.51 3.32
1200 2992 1.946768 GCTTGTCAGCTTGTGGTTGTA 59.053 47.619 0.00 0.00 43.51 2.41
1201 2993 2.554032 GCTTGTCAGCTTGTGGTTGTAT 59.446 45.455 0.00 0.00 43.51 2.29
1225 3017 4.974368 TTTGTTTGTTTGACGGAGATGT 57.026 36.364 0.00 0.00 0.00 3.06
1237 3029 1.131126 CGGAGATGTCAATGTGGTTGC 59.869 52.381 0.00 0.00 37.74 4.17
1242 3034 1.031235 TGTCAATGTGGTTGCTGGTG 58.969 50.000 0.00 0.00 37.74 4.17
1243 3035 0.314935 GTCAATGTGGTTGCTGGTGG 59.685 55.000 0.00 0.00 37.74 4.61
1246 3112 2.040947 TCAATGTGGTTGCTGGTGGATA 59.959 45.455 0.00 0.00 37.74 2.59
1254 3120 4.578516 TGGTTGCTGGTGGATAATAAATCG 59.421 41.667 0.00 0.00 0.00 3.34
1264 3130 6.072673 GGTGGATAATAAATCGCACTTTAGGG 60.073 42.308 0.00 0.00 0.00 3.53
1290 3156 1.985684 GCGCTAGCACAATTTGTTTCC 59.014 47.619 16.45 0.00 44.35 3.13
1348 3253 4.033358 CGCAAGTCTGACTCACAATTATCC 59.967 45.833 11.31 0.00 0.00 2.59
1350 3255 5.587844 GCAAGTCTGACTCACAATTATCCAT 59.412 40.000 11.31 0.00 0.00 3.41
1367 3275 1.481240 CATGATGTCGGAGTAGCACG 58.519 55.000 0.00 0.00 0.00 5.34
1386 3294 2.952978 ACGTGCACATTTAAACCCTGAA 59.047 40.909 18.64 0.00 0.00 3.02
1463 3372 7.060748 CACAACTTTATAGATCGCGGTATACTG 59.939 40.741 6.13 7.38 0.00 2.74
1467 3376 8.786898 ACTTTATAGATCGCGGTATACTGTTTA 58.213 33.333 13.23 0.02 0.00 2.01
1530 3439 6.610075 ATCCTTTGTTTTGGCATACTCATT 57.390 33.333 0.00 0.00 0.00 2.57
1576 3485 0.678048 GGCAAGCCTGGAATCTCGTT 60.678 55.000 3.29 0.00 0.00 3.85
1641 3552 1.421268 TGAAGTGTCCAAGGTGCAGAT 59.579 47.619 0.00 0.00 0.00 2.90
1643 3554 3.264193 TGAAGTGTCCAAGGTGCAGATAT 59.736 43.478 0.00 0.00 0.00 1.63
1662 3573 8.361139 GCAGATATATACAGTAGGAAACACAGT 58.639 37.037 0.00 0.00 0.00 3.55
1674 3585 9.057089 AGTAGGAAACACAGTTTAGAATCAAAG 57.943 33.333 0.00 0.00 0.00 2.77
1722 3680 7.463961 AATCTTTCATTTTGCACAGATCTCT 57.536 32.000 0.00 0.00 0.00 3.10
1723 3681 8.571461 AATCTTTCATTTTGCACAGATCTCTA 57.429 30.769 0.00 0.00 0.00 2.43
1724 3682 7.984422 TCTTTCATTTTGCACAGATCTCTAA 57.016 32.000 0.00 0.00 0.00 2.10
1725 3683 8.394971 TCTTTCATTTTGCACAGATCTCTAAA 57.605 30.769 0.00 0.00 0.00 1.85
1726 3684 8.849168 TCTTTCATTTTGCACAGATCTCTAAAA 58.151 29.630 0.00 0.00 0.00 1.52
1727 3685 9.467258 CTTTCATTTTGCACAGATCTCTAAAAA 57.533 29.630 0.00 0.00 0.00 1.94
1859 3818 6.373774 AGTTATCTCTTGCTGGAATCTGTTTG 59.626 38.462 0.00 0.00 0.00 2.93
1886 3845 0.521735 TGGACTCGTGAGTGATGACG 59.478 55.000 7.35 0.00 42.66 4.35
1887 3846 0.522180 GGACTCGTGAGTGATGACGT 59.478 55.000 7.35 0.00 42.66 4.34
1888 3847 1.466024 GGACTCGTGAGTGATGACGTC 60.466 57.143 9.11 9.11 42.66 4.34
1889 3848 1.197036 GACTCGTGAGTGATGACGTCA 59.803 52.381 22.48 22.48 42.66 4.35
1890 3849 1.813178 ACTCGTGAGTGATGACGTCAT 59.187 47.619 30.37 30.37 40.75 3.06
2018 3978 7.065803 CACACGAAAATACAGGAAGGATACAAT 59.934 37.037 0.00 0.00 41.41 2.71
2033 3993 0.978146 ACAATCCGTAGAGCTGGCCT 60.978 55.000 3.32 0.00 0.00 5.19
2436 4397 2.031012 CGTCAGCACTGCTCCCAA 59.969 61.111 0.00 0.00 36.40 4.12
2511 4472 4.374702 CGCCGCACAGAAGCACAC 62.375 66.667 0.00 0.00 0.00 3.82
2770 4731 2.017782 CGGAAAGACAGGAGATCTCGA 58.982 52.381 16.46 0.00 0.00 4.04
2771 4732 2.223386 CGGAAAGACAGGAGATCTCGAC 60.223 54.545 16.46 3.79 0.00 4.20
2809 4770 1.337817 CGCGTTCTGTGGAGAGTTCG 61.338 60.000 0.00 0.00 0.00 3.95
2810 4771 0.039437 GCGTTCTGTGGAGAGTTCGA 60.039 55.000 0.00 0.00 0.00 3.71
2811 4772 1.970447 CGTTCTGTGGAGAGTTCGAG 58.030 55.000 0.00 0.00 0.00 4.04
2812 4773 1.535896 CGTTCTGTGGAGAGTTCGAGA 59.464 52.381 0.00 0.00 0.00 4.04
2813 4774 2.413502 CGTTCTGTGGAGAGTTCGAGAG 60.414 54.545 0.00 0.00 0.00 3.20
2814 4775 1.827681 TCTGTGGAGAGTTCGAGAGG 58.172 55.000 0.00 0.00 0.00 3.69
2815 4776 1.074084 TCTGTGGAGAGTTCGAGAGGT 59.926 52.381 0.00 0.00 0.00 3.85
2816 4777 1.201181 CTGTGGAGAGTTCGAGAGGTG 59.799 57.143 0.00 0.00 0.00 4.00
2817 4778 1.249407 GTGGAGAGTTCGAGAGGTGT 58.751 55.000 0.00 0.00 0.00 4.16
2818 4779 1.200484 GTGGAGAGTTCGAGAGGTGTC 59.800 57.143 0.00 0.00 0.00 3.67
2819 4780 1.202891 TGGAGAGTTCGAGAGGTGTCA 60.203 52.381 0.00 0.00 0.00 3.58
2820 4781 1.887198 GGAGAGTTCGAGAGGTGTCAA 59.113 52.381 0.00 0.00 0.00 3.18
2821 4782 2.296471 GGAGAGTTCGAGAGGTGTCAAA 59.704 50.000 0.00 0.00 0.00 2.69
2822 4783 3.570559 GAGAGTTCGAGAGGTGTCAAAG 58.429 50.000 0.00 0.00 0.00 2.77
2823 4784 2.297597 AGAGTTCGAGAGGTGTCAAAGG 59.702 50.000 0.00 0.00 0.00 3.11
2824 4785 2.296471 GAGTTCGAGAGGTGTCAAAGGA 59.704 50.000 0.00 0.00 0.00 3.36
2825 4786 2.900546 AGTTCGAGAGGTGTCAAAGGAT 59.099 45.455 0.00 0.00 0.00 3.24
2826 4787 4.087182 AGTTCGAGAGGTGTCAAAGGATA 58.913 43.478 0.00 0.00 0.00 2.59
2827 4788 4.158764 AGTTCGAGAGGTGTCAAAGGATAG 59.841 45.833 0.00 0.00 0.00 2.08
2828 4789 2.427453 TCGAGAGGTGTCAAAGGATAGC 59.573 50.000 0.00 0.00 33.39 2.97
2829 4790 2.428890 CGAGAGGTGTCAAAGGATAGCT 59.571 50.000 0.00 0.00 44.30 3.32
2830 4791 3.736433 CGAGAGGTGTCAAAGGATAGCTG 60.736 52.174 0.00 0.00 42.12 4.24
2831 4792 3.445008 AGAGGTGTCAAAGGATAGCTGA 58.555 45.455 0.00 0.00 42.12 4.26
2832 4793 3.196685 AGAGGTGTCAAAGGATAGCTGAC 59.803 47.826 0.00 0.00 42.12 3.51
2833 4794 2.906389 AGGTGTCAAAGGATAGCTGACA 59.094 45.455 0.00 0.00 45.39 3.58
2836 4797 4.824479 TGTCAAAGGATAGCTGACATGA 57.176 40.909 0.00 0.00 43.36 3.07
2837 4798 4.763073 TGTCAAAGGATAGCTGACATGAG 58.237 43.478 0.00 0.00 43.36 2.90
2838 4799 4.223700 TGTCAAAGGATAGCTGACATGAGT 59.776 41.667 0.00 0.00 43.36 3.41
2839 4800 5.181748 GTCAAAGGATAGCTGACATGAGTT 58.818 41.667 0.00 0.00 39.42 3.01
2840 4801 5.645497 GTCAAAGGATAGCTGACATGAGTTT 59.355 40.000 0.00 0.00 39.42 2.66
2841 4802 6.150140 GTCAAAGGATAGCTGACATGAGTTTT 59.850 38.462 0.00 0.00 39.42 2.43
2842 4803 6.716628 TCAAAGGATAGCTGACATGAGTTTTT 59.283 34.615 0.00 0.00 0.00 1.94
2843 4804 6.506500 AAGGATAGCTGACATGAGTTTTTG 57.493 37.500 0.00 0.00 0.00 2.44
2844 4805 5.809001 AGGATAGCTGACATGAGTTTTTGA 58.191 37.500 0.00 0.00 0.00 2.69
2845 4806 6.421485 AGGATAGCTGACATGAGTTTTTGAT 58.579 36.000 0.00 0.00 0.00 2.57
2846 4807 6.318144 AGGATAGCTGACATGAGTTTTTGATG 59.682 38.462 0.00 0.00 0.00 3.07
2847 4808 4.778534 AGCTGACATGAGTTTTTGATGG 57.221 40.909 0.00 0.00 0.00 3.51
2848 4809 3.508793 AGCTGACATGAGTTTTTGATGGG 59.491 43.478 0.00 0.00 0.00 4.00
2849 4810 3.256631 GCTGACATGAGTTTTTGATGGGT 59.743 43.478 0.00 0.00 0.00 4.51
2850 4811 4.262164 GCTGACATGAGTTTTTGATGGGTT 60.262 41.667 0.00 0.00 0.00 4.11
2851 4812 5.739935 GCTGACATGAGTTTTTGATGGGTTT 60.740 40.000 0.00 0.00 0.00 3.27
2852 4813 6.516527 GCTGACATGAGTTTTTGATGGGTTTA 60.517 38.462 0.00 0.00 0.00 2.01
2853 4814 7.353414 TGACATGAGTTTTTGATGGGTTTAA 57.647 32.000 0.00 0.00 0.00 1.52
2854 4815 7.206687 TGACATGAGTTTTTGATGGGTTTAAC 58.793 34.615 0.00 0.00 0.00 2.01
2855 4816 6.212955 ACATGAGTTTTTGATGGGTTTAACG 58.787 36.000 0.00 0.00 0.00 3.18
2858 4819 5.357314 TGAGTTTTTGATGGGTTTAACGTCA 59.643 36.000 0.00 0.00 32.38 4.35
2930 4893 1.339929 GCACCGACAAGTTCCCAAAAT 59.660 47.619 0.00 0.00 0.00 1.82
2945 4908 3.756434 CCCAAAATGCTTAACCTCTCGAA 59.244 43.478 0.00 0.00 0.00 3.71
2982 4945 6.978343 TGTACTCATACTGCAACATTTACC 57.022 37.500 0.00 0.00 32.00 2.85
3002 4965 4.149598 ACCGTGCTACATATACTGATGGA 58.850 43.478 0.00 0.00 0.00 3.41
3003 4966 4.218635 ACCGTGCTACATATACTGATGGAG 59.781 45.833 0.00 0.00 40.33 3.86
3005 4968 5.157067 CGTGCTACATATACTGATGGAGTG 58.843 45.833 0.00 0.00 39.63 3.51
3008 4971 6.810676 GTGCTACATATACTGATGGAGTGATG 59.189 42.308 0.00 0.00 39.63 3.07
3009 4972 6.071165 TGCTACATATACTGATGGAGTGATGG 60.071 42.308 0.00 0.00 39.63 3.51
3010 4973 6.071108 GCTACATATACTGATGGAGTGATGGT 60.071 42.308 0.00 0.00 39.63 3.55
3011 4974 7.122799 GCTACATATACTGATGGAGTGATGGTA 59.877 40.741 0.00 0.00 39.63 3.25
3012 4975 9.194972 CTACATATACTGATGGAGTGATGGTAT 57.805 37.037 0.00 0.00 35.26 2.73
3014 4977 9.547279 ACATATACTGATGGAGTGATGGTATAA 57.453 33.333 0.00 0.00 35.26 0.98
3018 4981 9.775539 ATACTGATGGAGTGATGGTATAATACT 57.224 33.333 0.00 0.00 35.96 2.12
3045 5026 0.615850 GAGGTAGCTTTGCTGTCCCT 59.384 55.000 0.00 4.89 40.10 4.20
3080 5072 7.012044 AGCTTTCATAGTTCACTGTAAAACGTT 59.988 33.333 0.00 0.00 0.00 3.99
3203 5197 7.559486 AGCACTGATGAGACAAGTGATTTATA 58.441 34.615 6.24 0.00 32.77 0.98
3258 5252 2.878406 GCAGTACCACAAAGCTTCTTCA 59.122 45.455 0.00 0.00 0.00 3.02
3288 5282 2.266554 GCGATTCAGGTCAACTCTCTG 58.733 52.381 0.00 0.00 0.00 3.35
3366 5360 3.872511 TCCAATTGAAAGCGCATGATT 57.127 38.095 11.47 0.00 0.00 2.57
3425 5419 7.155328 AGATCAGGCTAATCACCTAAATTACG 58.845 38.462 0.00 0.00 35.10 3.18
3489 5483 1.413445 ACTCCAGATCTGCTGCTGATC 59.587 52.381 30.60 30.60 43.50 2.92
3490 5484 0.757512 TCCAGATCTGCTGCTGATCC 59.242 55.000 32.57 20.78 43.50 3.36
3492 5486 0.600518 CAGATCTGCTGCTGATCCGG 60.601 60.000 32.57 24.95 38.86 5.14
3504 5498 2.614481 GCTGATCCGGTTACCTTGTTCA 60.614 50.000 0.00 1.21 0.00 3.18
3525 5522 9.198475 TGTTCACCTTTTACCTTTTAATAACCA 57.802 29.630 0.00 0.00 0.00 3.67
3577 5574 5.827797 TGATATCTTTTTGGTACAGGATGGC 59.172 40.000 3.98 0.00 43.62 4.40
3619 5616 1.695893 CGCACGTCCACATCCATGTC 61.696 60.000 0.00 0.00 39.39 3.06
3786 5789 8.654230 AAGAAAAAGAATTGAAGGAAAAGCTC 57.346 30.769 0.00 0.00 0.00 4.09
3947 5951 5.359576 ACTTTTGGACTGTTTGTTCTGCATA 59.640 36.000 0.00 0.00 0.00 3.14
3961 5967 5.177511 TGTTCTGCATAGTTTTTCGAGAGTG 59.822 40.000 0.00 0.00 0.00 3.51
3962 5968 4.883083 TCTGCATAGTTTTTCGAGAGTGT 58.117 39.130 0.00 0.00 0.00 3.55
4010 6016 1.133982 CCTGGTGATGTCGAGTCTCAG 59.866 57.143 0.00 0.62 0.00 3.35
4044 6050 4.468510 TGAGGTGGTGGGTTACTTATGTAG 59.531 45.833 0.00 0.00 0.00 2.74
4046 6052 5.592795 AGGTGGTGGGTTACTTATGTAGTA 58.407 41.667 0.00 0.00 38.33 1.82
4047 6053 6.207532 AGGTGGTGGGTTACTTATGTAGTAT 58.792 40.000 0.00 0.00 39.07 2.12
4048 6054 6.099269 AGGTGGTGGGTTACTTATGTAGTATG 59.901 42.308 0.00 0.00 39.07 2.39
4050 6056 6.759827 GTGGTGGGTTACTTATGTAGTATGTG 59.240 42.308 0.00 0.00 39.07 3.21
4053 6107 7.656137 GGTGGGTTACTTATGTAGTATGTGATG 59.344 40.741 0.00 0.00 39.07 3.07
4069 6123 1.344438 TGATGACAGTTGTTCCTCGCT 59.656 47.619 0.00 0.00 0.00 4.93
4071 6125 2.724977 TGACAGTTGTTCCTCGCTAG 57.275 50.000 0.00 0.00 0.00 3.42
4074 6128 2.731976 GACAGTTGTTCCTCGCTAGTTG 59.268 50.000 0.00 0.00 0.00 3.16
4079 6133 0.037232 GTTCCTCGCTAGTTGTGGCT 60.037 55.000 0.00 0.00 0.00 4.75
4091 6145 6.649141 CGCTAGTTGTGGCTTTATGGATATTA 59.351 38.462 0.00 0.00 0.00 0.98
4095 6149 8.766994 AGTTGTGGCTTTATGGATATTAATGT 57.233 30.769 0.00 0.00 0.00 2.71
4154 6216 2.298593 GCGTCCGAGCCTTACAATC 58.701 57.895 0.00 0.00 0.00 2.67
4180 6242 5.900425 TGCATTGTTTCTTAGTTTGCAAGA 58.100 33.333 0.00 0.00 35.85 3.02
4193 6255 9.499585 CTTAGTTTGCAAGATTCAATACATGAG 57.500 33.333 0.00 0.00 39.77 2.90
4197 6259 8.857216 GTTTGCAAGATTCAATACATGAGAAAG 58.143 33.333 0.00 0.00 39.77 2.62
4219 6281 6.769134 AGGTATTGTGGGCAAAGTATTTAC 57.231 37.500 0.00 0.00 35.03 2.01
4236 6298 8.668510 AGTATTTACTTATGAGATGCACAAGG 57.331 34.615 0.00 0.00 35.31 3.61
4312 6374 4.140423 AGGGGATGTAATAGCTTCCTAGGT 60.140 45.833 9.08 0.00 34.32 3.08
4318 6380 7.345914 GGATGTAATAGCTTCCTAGGTATGGAT 59.654 40.741 9.08 0.00 42.66 3.41
4319 6381 7.482169 TGTAATAGCTTCCTAGGTATGGATG 57.518 40.000 9.08 0.00 42.66 3.51
4336 6398 9.555727 GGTATGGATGATTAGCTGTTTTACTTA 57.444 33.333 0.00 0.00 0.00 2.24
4378 6442 8.893219 TTTGTTTTATGTTTGTGATTATGCCA 57.107 26.923 0.00 0.00 0.00 4.92
4379 6443 9.499479 TTTGTTTTATGTTTGTGATTATGCCAT 57.501 25.926 0.00 0.00 0.00 4.40
4380 6444 8.476657 TGTTTTATGTTTGTGATTATGCCATG 57.523 30.769 0.00 0.00 0.00 3.66
4381 6445 8.309656 TGTTTTATGTTTGTGATTATGCCATGA 58.690 29.630 0.00 0.00 0.00 3.07
4382 6446 9.149225 GTTTTATGTTTGTGATTATGCCATGAA 57.851 29.630 0.00 0.00 0.00 2.57
4383 6447 9.887629 TTTTATGTTTGTGATTATGCCATGAAT 57.112 25.926 0.00 0.00 0.00 2.57
4384 6448 8.874744 TTATGTTTGTGATTATGCCATGAATG 57.125 30.769 0.00 0.00 0.00 2.67
4385 6449 6.527057 TGTTTGTGATTATGCCATGAATGA 57.473 33.333 0.00 0.00 0.00 2.57
4386 6450 7.114866 TGTTTGTGATTATGCCATGAATGAT 57.885 32.000 0.00 0.00 0.00 2.45
4468 6544 9.916397 CTAACATGATCTTTTAATACGTGGAAC 57.084 33.333 0.00 0.00 0.00 3.62
4500 6576 2.573462 AGGCCTCTTGCAGATTGTTCTA 59.427 45.455 0.00 0.00 43.89 2.10
4501 6577 3.009473 AGGCCTCTTGCAGATTGTTCTAA 59.991 43.478 0.00 0.00 43.89 2.10
4502 6578 3.376546 GGCCTCTTGCAGATTGTTCTAAG 59.623 47.826 0.00 0.00 43.89 2.18
4503 6579 3.376546 GCCTCTTGCAGATTGTTCTAAGG 59.623 47.826 0.00 0.00 40.77 2.69
4504 6580 4.836825 CCTCTTGCAGATTGTTCTAAGGA 58.163 43.478 0.00 0.00 0.00 3.36
4505 6581 5.435291 CCTCTTGCAGATTGTTCTAAGGAT 58.565 41.667 0.00 0.00 0.00 3.24
4506 6582 6.586344 CCTCTTGCAGATTGTTCTAAGGATA 58.414 40.000 0.00 0.00 0.00 2.59
4507 6583 7.222872 CCTCTTGCAGATTGTTCTAAGGATAT 58.777 38.462 0.00 0.00 0.00 1.63
4508 6584 8.370940 CCTCTTGCAGATTGTTCTAAGGATATA 58.629 37.037 0.00 0.00 0.00 0.86
4509 6585 9.202273 CTCTTGCAGATTGTTCTAAGGATATAC 57.798 37.037 0.00 0.00 0.00 1.47
4510 6586 8.928448 TCTTGCAGATTGTTCTAAGGATATACT 58.072 33.333 0.00 0.00 0.00 2.12
4523 6599 9.509956 TCTAAGGATATACTAAGAGTCTCTTGC 57.490 37.037 22.95 2.41 37.29 4.01
4524 6600 9.290988 CTAAGGATATACTAAGAGTCTCTTGCA 57.709 37.037 22.95 9.59 37.29 4.08
4525 6601 7.759489 AGGATATACTAAGAGTCTCTTGCAG 57.241 40.000 22.95 15.99 37.29 4.41
4526 6602 7.522542 AGGATATACTAAGAGTCTCTTGCAGA 58.477 38.462 22.95 7.36 37.29 4.26
4527 6603 8.170061 AGGATATACTAAGAGTCTCTTGCAGAT 58.830 37.037 22.95 13.43 37.29 2.90
4528 6604 8.802267 GGATATACTAAGAGTCTCTTGCAGATT 58.198 37.037 22.95 9.94 37.29 2.40
4529 6605 9.624697 GATATACTAAGAGTCTCTTGCAGATTG 57.375 37.037 22.95 8.20 37.29 2.67
4530 6606 5.736951 ACTAAGAGTCTCTTGCAGATTGT 57.263 39.130 22.95 8.71 37.29 2.71
4531 6607 6.107901 ACTAAGAGTCTCTTGCAGATTGTT 57.892 37.500 22.95 0.00 37.29 2.83
4532 6608 6.162777 ACTAAGAGTCTCTTGCAGATTGTTC 58.837 40.000 22.95 0.00 37.29 3.18
4533 6609 4.888326 AGAGTCTCTTGCAGATTGTTCT 57.112 40.909 0.00 0.00 32.08 3.01
4534 6610 5.991933 AGAGTCTCTTGCAGATTGTTCTA 57.008 39.130 0.00 0.00 32.08 2.10
4535 6611 6.352016 AGAGTCTCTTGCAGATTGTTCTAA 57.648 37.500 0.00 0.00 32.08 2.10
4536 6612 6.397272 AGAGTCTCTTGCAGATTGTTCTAAG 58.603 40.000 0.00 0.00 32.08 2.18
4537 6613 5.486526 AGTCTCTTGCAGATTGTTCTAAGG 58.513 41.667 0.00 0.00 32.08 2.69
4538 6614 5.247110 AGTCTCTTGCAGATTGTTCTAAGGA 59.753 40.000 0.00 0.00 32.08 3.36
4539 6615 6.070309 AGTCTCTTGCAGATTGTTCTAAGGAT 60.070 38.462 0.00 0.00 32.08 3.24
4540 6616 7.124901 AGTCTCTTGCAGATTGTTCTAAGGATA 59.875 37.037 0.00 0.00 32.08 2.59
4541 6617 7.930865 GTCTCTTGCAGATTGTTCTAAGGATAT 59.069 37.037 0.00 0.00 32.08 1.63
4542 6618 9.147732 TCTCTTGCAGATTGTTCTAAGGATATA 57.852 33.333 0.00 0.00 0.00 0.86
4543 6619 9.202273 CTCTTGCAGATTGTTCTAAGGATATAC 57.798 37.037 0.00 0.00 0.00 1.47
4544 6620 8.928448 TCTTGCAGATTGTTCTAAGGATATACT 58.072 33.333 0.00 0.00 0.00 2.12
4557 6633 9.509956 TCTAAGGATATACTAAGAGTCTCTTGC 57.490 37.037 22.95 2.41 37.29 4.01
4558 6634 9.290988 CTAAGGATATACTAAGAGTCTCTTGCA 57.709 37.037 22.95 9.59 37.29 4.08
4559 6635 7.759489 AGGATATACTAAGAGTCTCTTGCAG 57.241 40.000 22.95 15.99 37.29 4.41
4560 6636 7.522542 AGGATATACTAAGAGTCTCTTGCAGA 58.477 38.462 22.95 7.36 37.29 4.26
4561 6637 8.170061 AGGATATACTAAGAGTCTCTTGCAGAT 58.830 37.037 22.95 13.43 37.29 2.90
4562 6638 8.802267 GGATATACTAAGAGTCTCTTGCAGATT 58.198 37.037 22.95 9.94 37.29 2.40
4563 6639 9.624697 GATATACTAAGAGTCTCTTGCAGATTG 57.375 37.037 22.95 8.20 37.29 2.67
4564 6640 5.736951 ACTAAGAGTCTCTTGCAGATTGT 57.263 39.130 22.95 8.71 37.29 2.71
4565 6641 6.107901 ACTAAGAGTCTCTTGCAGATTGTT 57.892 37.500 22.95 0.00 37.29 2.83
4566 6642 6.162777 ACTAAGAGTCTCTTGCAGATTGTTC 58.837 40.000 22.95 0.00 37.29 3.18
4567 6643 4.888326 AGAGTCTCTTGCAGATTGTTCT 57.112 40.909 0.00 0.00 32.08 3.01
4577 6653 9.941325 CTCTTGCAGATTGTTCTAAGGATATAT 57.059 33.333 0.00 0.00 0.00 0.86
4659 6735 7.558444 TCATTTAGTTTCAGTTTACACCTTGGT 59.442 33.333 0.00 0.00 0.00 3.67
4686 6762 7.332430 TCGACATTACCTGTACCATTTAAGTTG 59.668 37.037 0.00 0.00 38.54 3.16
4687 6763 7.332430 CGACATTACCTGTACCATTTAAGTTGA 59.668 37.037 0.00 0.00 38.54 3.18
4689 6765 7.940137 ACATTACCTGTACCATTTAAGTTGACA 59.060 33.333 0.00 0.00 35.91 3.58
4694 6770 7.340999 ACCTGTACCATTTAAGTTGACAAAAGT 59.659 33.333 0.00 0.00 0.00 2.66
4734 6811 7.826918 TTACTTTGTAAGTGCATTAAGGGTT 57.173 32.000 2.45 0.00 42.84 4.11
4735 6812 8.921353 TTACTTTGTAAGTGCATTAAGGGTTA 57.079 30.769 2.45 0.00 42.84 2.85
4736 6813 9.523168 TTACTTTGTAAGTGCATTAAGGGTTAT 57.477 29.630 2.45 0.00 42.84 1.89
4738 6815 9.695155 ACTTTGTAAGTGCATTAAGGGTTATAT 57.305 29.630 0.00 0.00 41.01 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 0.920763 TCATCATGGCCCAGACCCTT 60.921 55.000 0.00 0.00 0.00 3.95
15 16 3.181445 GGTACACTATTCATCATGGCCCA 60.181 47.826 0.00 0.00 0.00 5.36
67 68 3.493503 CCTAACGGTGTTCTTGAAGACAC 59.506 47.826 15.05 15.05 0.00 3.67
68 69 3.385433 TCCTAACGGTGTTCTTGAAGACA 59.615 43.478 11.73 0.00 0.00 3.41
77 80 4.886489 ACTCCTACTATCCTAACGGTGTTC 59.114 45.833 0.00 0.00 0.00 3.18
96 99 2.234168 GGTCCTCCAAGTGAAGTACTCC 59.766 54.545 0.00 0.00 39.18 3.85
97 100 2.897969 TGGTCCTCCAAGTGAAGTACTC 59.102 50.000 0.00 0.00 41.25 2.59
98 101 2.972348 TGGTCCTCCAAGTGAAGTACT 58.028 47.619 0.00 0.00 41.25 2.73
197 202 0.325765 AGGGAGGACTAGGGTTCTGC 60.326 60.000 0.00 0.00 38.49 4.26
202 208 0.618968 CAGCAAGGGAGGACTAGGGT 60.619 60.000 0.00 0.00 0.00 4.34
220 226 7.984422 TGAGAAAAGATAATTGAGCTCAACA 57.016 32.000 30.66 21.21 38.86 3.33
225 231 7.120432 GGTGTCTTGAGAAAAGATAATTGAGCT 59.880 37.037 0.00 0.00 0.00 4.09
231 237 6.656693 CACTGGGTGTCTTGAGAAAAGATAAT 59.343 38.462 0.00 0.00 0.00 1.28
250 256 3.739401 ATAAAAGGAAGTCCCACTGGG 57.261 47.619 7.97 7.97 46.11 4.45
252 258 8.581253 AAGAAATATAAAAGGAAGTCCCACTG 57.419 34.615 0.00 0.00 37.41 3.66
271 277 8.085909 CGTAATTTTGGTAGGGTTCAAAGAAAT 58.914 33.333 0.00 0.00 34.83 2.17
285 291 8.252417 TGTCATAGCTAGTTCGTAATTTTGGTA 58.748 33.333 0.00 0.00 0.00 3.25
305 312 5.482006 CCTCTTTGTGTGTGATCTGTCATA 58.518 41.667 0.00 0.00 36.60 2.15
323 330 3.421844 GTGTATTCAAGTTGCCCCTCTT 58.578 45.455 0.00 0.00 0.00 2.85
380 387 2.685897 TCTTGTCTTTTGTTGGAACCGG 59.314 45.455 0.00 0.00 0.00 5.28
381 388 4.102649 GTTCTTGTCTTTTGTTGGAACCG 58.897 43.478 0.00 0.00 0.00 4.44
386 393 4.981794 AGAACGTTCTTGTCTTTTGTTGG 58.018 39.130 24.93 0.00 32.55 3.77
404 411 8.647143 TTTTTCATTGGAGTTCATGAAAGAAC 57.353 30.769 10.35 0.00 46.35 3.01
490 497 8.985315 TGCTCCTCAGATTACATGAAAATAAT 57.015 30.769 0.00 0.00 0.00 1.28
499 506 4.833478 AGTGTTGCTCCTCAGATTACAT 57.167 40.909 0.00 0.00 0.00 2.29
519 526 3.350833 ACCAGCAGCAAAGAAAGGATAG 58.649 45.455 0.00 0.00 0.00 2.08
534 541 4.325028 TCGTAAACTAGACAAACCAGCA 57.675 40.909 0.00 0.00 0.00 4.41
556 563 6.413892 TGTATGTTCATACATCTGCCTTTCA 58.586 36.000 18.05 0.00 43.81 2.69
562 569 6.707608 TCCATCTTGTATGTTCATACATCTGC 59.292 38.462 21.20 0.00 43.81 4.26
585 2266 3.460103 TCTAGTTTGTGTTCGGTGTTCC 58.540 45.455 0.00 0.00 0.00 3.62
586 2267 5.668558 AATCTAGTTTGTGTTCGGTGTTC 57.331 39.130 0.00 0.00 0.00 3.18
587 2268 7.442969 TGATAAATCTAGTTTGTGTTCGGTGTT 59.557 33.333 0.00 0.00 0.00 3.32
588 2269 6.932400 TGATAAATCTAGTTTGTGTTCGGTGT 59.068 34.615 0.00 0.00 0.00 4.16
589 2270 7.359262 TGATAAATCTAGTTTGTGTTCGGTG 57.641 36.000 0.00 0.00 0.00 4.94
590 2271 7.972832 TTGATAAATCTAGTTTGTGTTCGGT 57.027 32.000 0.00 0.00 0.00 4.69
591 2272 9.113876 GTTTTGATAAATCTAGTTTGTGTTCGG 57.886 33.333 0.00 0.00 0.00 4.30
592 2273 9.878599 AGTTTTGATAAATCTAGTTTGTGTTCG 57.121 29.630 0.00 0.00 0.00 3.95
637 2318 9.893305 ACCAAATTCGTTGATAGTTCTAAAAAG 57.107 29.630 0.00 0.00 39.87 2.27
641 2322 9.715121 AGTAACCAAATTCGTTGATAGTTCTAA 57.285 29.630 2.02 0.00 39.87 2.10
675 2356 2.423538 GCCCGCAGTTATCATCTGTTTT 59.576 45.455 0.00 0.00 35.60 2.43
686 2367 3.646715 AGCCAAGGCCCGCAGTTA 61.647 61.111 7.62 0.00 43.17 2.24
746 2438 1.414158 GTGATAGCTGTGGGCCTCTA 58.586 55.000 4.53 1.45 43.05 2.43
748 2440 1.147153 GGTGATAGCTGTGGGCCTC 59.853 63.158 4.53 0.49 43.05 4.70
786 2478 0.597637 AACAGTTGAGCACCGAGTCG 60.598 55.000 5.29 5.29 0.00 4.18
787 2479 0.861837 CAACAGTTGAGCACCGAGTC 59.138 55.000 7.61 0.00 0.00 3.36
790 2482 1.891919 GGCAACAGTTGAGCACCGA 60.892 57.895 17.99 0.00 0.00 4.69
793 2485 1.008079 GCAGGCAACAGTTGAGCAC 60.008 57.895 17.99 3.78 41.41 4.40
795 2487 1.285023 CAGCAGGCAACAGTTGAGC 59.715 57.895 17.99 15.91 36.37 4.26
796 2488 1.285023 GCAGCAGGCAACAGTTGAG 59.715 57.895 17.99 6.93 43.97 3.02
797 2489 3.435590 GCAGCAGGCAACAGTTGA 58.564 55.556 17.99 0.00 43.97 3.18
807 2499 1.466025 TTTTTGAGGGCTGCAGCAGG 61.466 55.000 37.63 3.24 44.36 4.85
808 2500 2.043625 TTTTTGAGGGCTGCAGCAG 58.956 52.632 37.63 18.93 44.36 4.24
809 2501 4.274012 TTTTTGAGGGCTGCAGCA 57.726 50.000 37.63 16.88 44.36 4.41
960 2725 4.658786 AAGGAGGAGGTGGCCCGT 62.659 66.667 0.00 0.00 35.12 5.28
1181 2973 4.836125 AATACAACCACAAGCTGACAAG 57.164 40.909 0.00 0.00 0.00 3.16
1225 3017 0.184692 TCCACCAGCAACCACATTGA 59.815 50.000 0.00 0.00 41.23 2.57
1231 3023 4.578516 CGATTTATTATCCACCAGCAACCA 59.421 41.667 0.00 0.00 0.00 3.67
1237 3029 6.377327 AAAGTGCGATTTATTATCCACCAG 57.623 37.500 0.00 0.00 0.00 4.00
1242 3034 7.308408 GGAACCCTAAAGTGCGATTTATTATCC 60.308 40.741 0.00 0.00 0.00 2.59
1243 3035 7.227910 TGGAACCCTAAAGTGCGATTTATTATC 59.772 37.037 0.00 0.00 0.00 1.75
1246 3112 5.258051 TGGAACCCTAAAGTGCGATTTATT 58.742 37.500 0.00 0.00 0.00 1.40
1254 3120 1.923227 GCGCTGGAACCCTAAAGTGC 61.923 60.000 0.00 0.00 38.80 4.40
1264 3130 0.804989 AATTGTGCTAGCGCTGGAAC 59.195 50.000 24.19 24.19 36.97 3.62
1348 3253 1.202302 ACGTGCTACTCCGACATCATG 60.202 52.381 0.00 0.00 0.00 3.07
1350 3255 0.170339 CACGTGCTACTCCGACATCA 59.830 55.000 0.82 0.00 0.00 3.07
1367 3275 4.846779 TCTTCAGGGTTTAAATGTGCAC 57.153 40.909 10.75 10.75 0.00 4.57
1437 3345 7.060748 CAGTATACCGCGATCTATAAAGTTGTG 59.939 40.741 8.23 0.00 0.00 3.33
1440 3348 7.211966 ACAGTATACCGCGATCTATAAAGTT 57.788 36.000 8.23 0.00 0.00 2.66
1463 3372 7.461182 TGGGGCATGTTAATATAGCATAAAC 57.539 36.000 0.00 0.00 0.00 2.01
1467 3376 6.496743 AGATTGGGGCATGTTAATATAGCAT 58.503 36.000 0.00 0.00 0.00 3.79
1483 3392 1.004745 ACCTGCAGTGTAAGATTGGGG 59.995 52.381 13.81 0.00 0.00 4.96
1530 3439 5.302360 AGTGTTTAACTGTAAATCTCGGCA 58.698 37.500 0.00 0.00 37.88 5.69
1696 3654 9.186837 AGAGATCTGTGCAAAATGAAAGATTAT 57.813 29.630 0.00 0.00 0.00 1.28
1697 3655 8.571461 AGAGATCTGTGCAAAATGAAAGATTA 57.429 30.769 0.00 0.00 0.00 1.75
1699 3657 8.571461 TTAGAGATCTGTGCAAAATGAAAGAT 57.429 30.769 0.00 0.00 0.00 2.40
1724 3682 8.620116 ACATTAGCCATGCATTTTTACTTTTT 57.380 26.923 0.00 0.00 36.14 1.94
1725 3683 9.717942 TTACATTAGCCATGCATTTTTACTTTT 57.282 25.926 0.00 0.00 36.14 2.27
1726 3684 9.717942 TTTACATTAGCCATGCATTTTTACTTT 57.282 25.926 0.00 0.00 36.14 2.66
1727 3685 9.889128 ATTTACATTAGCCATGCATTTTTACTT 57.111 25.926 0.00 0.00 36.14 2.24
1728 3686 9.533253 GATTTACATTAGCCATGCATTTTTACT 57.467 29.630 0.00 0.00 36.14 2.24
1729 3687 9.533253 AGATTTACATTAGCCATGCATTTTTAC 57.467 29.630 0.00 0.00 36.14 2.01
1824 3783 6.203723 CCAGCAAGAGATAACTATTTGGCTAC 59.796 42.308 0.00 0.00 0.00 3.58
1859 3818 2.093106 ACTCACGAGTCCATCAGGTAC 58.907 52.381 0.00 0.00 36.92 3.34
1922 3881 1.355971 ACAAGTAACGTATGCCTGCG 58.644 50.000 0.00 0.00 36.47 5.18
1992 3952 5.872617 TGTATCCTTCCTGTATTTTCGTGTG 59.127 40.000 0.00 0.00 0.00 3.82
1994 3954 6.978343 TTGTATCCTTCCTGTATTTTCGTG 57.022 37.500 0.00 0.00 0.00 4.35
2018 3978 2.829003 CGAGGCCAGCTCTACGGA 60.829 66.667 5.01 0.00 0.00 4.69
2033 3993 0.744281 TCTTCTGCGATGTATGGCGA 59.256 50.000 0.00 0.00 33.95 5.54
2453 4414 1.592400 GTGTGTTTTGCTGCAGGGC 60.592 57.895 17.12 2.89 0.00 5.19
2510 4471 3.953775 CAACCCTGCTCCGGTGGT 61.954 66.667 0.00 0.00 32.55 4.16
2511 4472 4.722700 CCAACCCTGCTCCGGTGG 62.723 72.222 0.00 0.00 32.55 4.61
2532 4493 0.826256 GTGGGTGTTTGGTTCCTCCC 60.826 60.000 0.00 0.00 34.77 4.30
2643 4604 0.831307 GATAGGTTCCAGGAGGCGTT 59.169 55.000 0.00 0.00 33.74 4.84
2749 4710 1.535015 CGAGATCTCCTGTCTTTCCGC 60.535 57.143 17.13 0.00 0.00 5.54
2770 4731 1.004440 GAGGCGAACAGAAGCAGGT 60.004 57.895 0.00 0.00 34.54 4.00
2771 4732 0.739112 GAGAGGCGAACAGAAGCAGG 60.739 60.000 0.00 0.00 34.54 4.85
2774 4735 2.448705 GCGAGAGGCGAACAGAAGC 61.449 63.158 0.00 0.00 44.57 3.86
2809 4770 3.449018 TCAGCTATCCTTTGACACCTCTC 59.551 47.826 0.00 0.00 0.00 3.20
2810 4771 3.196685 GTCAGCTATCCTTTGACACCTCT 59.803 47.826 0.00 0.00 40.62 3.69
2811 4772 3.055819 TGTCAGCTATCCTTTGACACCTC 60.056 47.826 2.68 0.00 44.39 3.85
2812 4773 2.906389 TGTCAGCTATCCTTTGACACCT 59.094 45.455 2.68 0.00 44.39 4.00
2813 4774 3.334583 TGTCAGCTATCCTTTGACACC 57.665 47.619 2.68 0.00 44.39 4.16
2816 4777 4.764172 ACTCATGTCAGCTATCCTTTGAC 58.236 43.478 0.00 0.00 41.15 3.18
2817 4778 5.426689 AACTCATGTCAGCTATCCTTTGA 57.573 39.130 0.00 0.00 0.00 2.69
2818 4779 6.506500 AAAACTCATGTCAGCTATCCTTTG 57.493 37.500 0.00 0.00 0.00 2.77
2819 4780 6.716628 TCAAAAACTCATGTCAGCTATCCTTT 59.283 34.615 0.00 0.00 0.00 3.11
2820 4781 6.240894 TCAAAAACTCATGTCAGCTATCCTT 58.759 36.000 0.00 0.00 0.00 3.36
2821 4782 5.809001 TCAAAAACTCATGTCAGCTATCCT 58.191 37.500 0.00 0.00 0.00 3.24
2822 4783 6.459298 CCATCAAAAACTCATGTCAGCTATCC 60.459 42.308 0.00 0.00 0.00 2.59
2823 4784 6.459298 CCCATCAAAAACTCATGTCAGCTATC 60.459 42.308 0.00 0.00 0.00 2.08
2824 4785 5.359009 CCCATCAAAAACTCATGTCAGCTAT 59.641 40.000 0.00 0.00 0.00 2.97
2825 4786 4.701651 CCCATCAAAAACTCATGTCAGCTA 59.298 41.667 0.00 0.00 0.00 3.32
2826 4787 3.508793 CCCATCAAAAACTCATGTCAGCT 59.491 43.478 0.00 0.00 0.00 4.24
2827 4788 3.256631 ACCCATCAAAAACTCATGTCAGC 59.743 43.478 0.00 0.00 0.00 4.26
2828 4789 5.458041 AACCCATCAAAAACTCATGTCAG 57.542 39.130 0.00 0.00 0.00 3.51
2829 4790 5.867903 AAACCCATCAAAAACTCATGTCA 57.132 34.783 0.00 0.00 0.00 3.58
2830 4791 6.362283 CGTTAAACCCATCAAAAACTCATGTC 59.638 38.462 0.00 0.00 0.00 3.06
2831 4792 6.183360 ACGTTAAACCCATCAAAAACTCATGT 60.183 34.615 0.00 0.00 0.00 3.21
2832 4793 6.212955 ACGTTAAACCCATCAAAAACTCATG 58.787 36.000 0.00 0.00 0.00 3.07
2833 4794 6.039941 TGACGTTAAACCCATCAAAAACTCAT 59.960 34.615 0.00 0.00 0.00 2.90
2834 4795 5.357314 TGACGTTAAACCCATCAAAAACTCA 59.643 36.000 0.00 0.00 0.00 3.41
2835 4796 5.823353 TGACGTTAAACCCATCAAAAACTC 58.177 37.500 0.00 0.00 0.00 3.01
2836 4797 5.838531 TGACGTTAAACCCATCAAAAACT 57.161 34.783 0.00 0.00 0.00 2.66
2837 4798 6.210078 TGATGACGTTAAACCCATCAAAAAC 58.790 36.000 11.62 0.00 41.41 2.43
2838 4799 6.392625 TGATGACGTTAAACCCATCAAAAA 57.607 33.333 11.62 0.00 41.41 1.94
2839 4800 6.432783 AGATGATGACGTTAAACCCATCAAAA 59.567 34.615 16.35 0.00 45.51 2.44
2840 4801 5.943416 AGATGATGACGTTAAACCCATCAAA 59.057 36.000 16.35 0.00 45.51 2.69
2841 4802 5.496556 AGATGATGACGTTAAACCCATCAA 58.503 37.500 16.35 4.23 45.51 2.57
2842 4803 5.097742 AGATGATGACGTTAAACCCATCA 57.902 39.130 15.18 15.18 46.14 3.07
2843 4804 6.436843 AAAGATGATGACGTTAAACCCATC 57.563 37.500 5.88 5.88 36.77 3.51
2844 4805 6.834168 AAAAGATGATGACGTTAAACCCAT 57.166 33.333 0.00 0.00 0.00 4.00
2845 4806 6.642707 AAAAAGATGATGACGTTAAACCCA 57.357 33.333 0.00 0.00 0.00 4.51
2846 4807 8.455682 TCATAAAAAGATGATGACGTTAAACCC 58.544 33.333 0.00 0.00 30.75 4.11
2885 4846 7.805071 GCACAAAGTGATGGACATAATAATAGC 59.195 37.037 0.58 0.00 35.23 2.97
2893 4854 3.081061 GGTGCACAAAGTGATGGACATA 58.919 45.455 20.43 0.00 38.78 2.29
2894 4855 1.888512 GGTGCACAAAGTGATGGACAT 59.111 47.619 20.43 0.00 38.78 3.06
2895 4856 1.317613 GGTGCACAAAGTGATGGACA 58.682 50.000 20.43 0.00 38.78 4.02
2908 4869 1.098712 TTGGGAACTTGTCGGTGCAC 61.099 55.000 8.80 8.80 0.00 4.57
2930 4893 3.864921 GCCTTTCTTCGAGAGGTTAAGCA 60.865 47.826 7.52 0.00 36.46 3.91
2945 4908 4.640771 TGAGTACATTTCCTGCCTTTCT 57.359 40.909 0.00 0.00 0.00 2.52
2982 4945 5.048713 TCACTCCATCAGTATATGTAGCACG 60.049 44.000 0.00 0.00 32.21 5.34
3003 4966 9.408069 CCTCGAGTTAAAGTATTATACCATCAC 57.592 37.037 12.31 0.00 0.00 3.06
3008 4971 8.791675 AGCTACCTCGAGTTAAAGTATTATACC 58.208 37.037 12.31 0.00 0.00 2.73
3011 4974 9.530633 CAAAGCTACCTCGAGTTAAAGTATTAT 57.469 33.333 12.31 0.00 0.00 1.28
3012 4975 7.490402 GCAAAGCTACCTCGAGTTAAAGTATTA 59.510 37.037 12.31 0.00 0.00 0.98
3013 4976 6.313164 GCAAAGCTACCTCGAGTTAAAGTATT 59.687 38.462 12.31 0.00 0.00 1.89
3014 4977 5.811100 GCAAAGCTACCTCGAGTTAAAGTAT 59.189 40.000 12.31 0.00 0.00 2.12
3015 4978 5.047519 AGCAAAGCTACCTCGAGTTAAAGTA 60.048 40.000 12.31 5.07 36.99 2.24
3016 4979 3.995048 GCAAAGCTACCTCGAGTTAAAGT 59.005 43.478 12.31 4.05 0.00 2.66
3017 4980 4.092091 CAGCAAAGCTACCTCGAGTTAAAG 59.908 45.833 12.31 4.10 36.40 1.85
3018 4981 3.994392 CAGCAAAGCTACCTCGAGTTAAA 59.006 43.478 12.31 0.00 36.40 1.52
3045 5026 2.778299 ACTATGAAAGCTGCGAACCAA 58.222 42.857 0.00 0.00 0.00 3.67
3203 5197 2.301346 CAACTTCCTTTGCAGTGACCT 58.699 47.619 0.00 0.00 0.00 3.85
3258 5252 4.323417 TGACCTGAATCGCAAATGTAAGT 58.677 39.130 0.00 0.00 0.00 2.24
3366 5360 2.378547 ACCCCAGTAGCAGAATCCAAAA 59.621 45.455 0.00 0.00 0.00 2.44
3425 5419 3.199880 ACCTCATATGGCAGTGTAAGC 57.800 47.619 2.13 0.00 0.00 3.09
3489 5483 2.265589 AAGGTGAACAAGGTAACCGG 57.734 50.000 0.00 0.00 37.78 5.28
3490 5484 4.023792 GGTAAAAGGTGAACAAGGTAACCG 60.024 45.833 0.00 0.00 37.78 4.44
3492 5486 6.704289 AAGGTAAAAGGTGAACAAGGTAAC 57.296 37.500 0.00 0.00 0.00 2.50
3525 5522 7.001099 AGGAAATGCTTCTTTGTCATTCATT 57.999 32.000 0.00 0.00 30.84 2.57
3558 5555 2.556559 GGGCCATCCTGTACCAAAAAGA 60.557 50.000 4.39 0.00 0.00 2.52
3577 5574 1.530013 CTGTTTGGCCAGCTTGAGGG 61.530 60.000 5.11 0.00 0.00 4.30
3619 5616 0.842635 CTCCCTTCTTCCTGGGGATG 59.157 60.000 0.00 0.00 46.74 3.51
3679 5676 0.831288 TGGATGGCAAAACAGGTGGG 60.831 55.000 0.00 0.00 0.00 4.61
3733 5732 7.543172 CACATCAATCTGTTACAAGGAAAATGG 59.457 37.037 0.00 0.00 0.00 3.16
3734 5733 8.298854 TCACATCAATCTGTTACAAGGAAAATG 58.701 33.333 0.00 0.00 0.00 2.32
3741 5744 9.734620 TTTTCTTTCACATCAATCTGTTACAAG 57.265 29.630 0.00 0.00 0.00 3.16
3786 5789 6.486253 TCTTTTCTTTCAACATCCAGATCG 57.514 37.500 0.00 0.00 0.00 3.69
3915 5919 9.145865 GAACAAACAGTCCAAAAGTTTATTTCA 57.854 29.630 0.00 0.00 34.03 2.69
3927 5931 4.460263 ACTATGCAGAACAAACAGTCCAA 58.540 39.130 0.00 0.00 0.00 3.53
3947 5951 5.297547 TCATTGCTACACTCTCGAAAAACT 58.702 37.500 0.00 0.00 0.00 2.66
4010 6016 0.901124 ACCACCTCAGACTCATCAGC 59.099 55.000 0.00 0.00 0.00 4.26
4044 6050 4.327357 CGAGGAACAACTGTCATCACATAC 59.673 45.833 0.00 0.00 0.00 2.39
4046 6052 3.329386 CGAGGAACAACTGTCATCACAT 58.671 45.455 0.00 0.00 0.00 3.21
4047 6053 2.754472 CGAGGAACAACTGTCATCACA 58.246 47.619 0.00 0.00 0.00 3.58
4048 6054 1.461127 GCGAGGAACAACTGTCATCAC 59.539 52.381 0.00 0.00 0.00 3.06
4050 6056 2.086054 AGCGAGGAACAACTGTCATC 57.914 50.000 0.00 0.00 0.00 2.92
4053 6107 2.726832 ACTAGCGAGGAACAACTGTC 57.273 50.000 0.00 0.00 0.00 3.51
4069 6123 9.860650 ACATTAATATCCATAAAGCCACAACTA 57.139 29.630 0.00 0.00 0.00 2.24
4071 6125 9.816354 AAACATTAATATCCATAAAGCCACAAC 57.184 29.630 0.00 0.00 0.00 3.32
4091 6145 9.719355 GTTTGGGATCAATAAACCTAAAACATT 57.281 29.630 0.00 0.00 36.31 2.71
4095 6149 7.821846 GCATGTTTGGGATCAATAAACCTAAAA 59.178 33.333 12.96 0.00 36.31 1.52
4138 6193 0.831307 AGGGATTGTAAGGCTCGGAC 59.169 55.000 0.00 0.00 0.00 4.79
4154 6216 3.989817 GCAAACTAAGAAACAATGCAGGG 59.010 43.478 0.00 0.00 32.80 4.45
4193 6255 5.914898 ATACTTTGCCCACAATACCTTTC 57.085 39.130 0.00 0.00 35.21 2.62
4197 6259 6.769134 AGTAAATACTTTGCCCACAATACC 57.231 37.500 0.00 0.00 35.21 2.73
4236 6298 6.377327 TTTTTGCTATAATCTAGCCACTGC 57.623 37.500 2.07 0.00 39.69 4.40
4318 6380 8.856153 TGGTTGATAAGTAAAACAGCTAATCA 57.144 30.769 0.00 0.00 0.00 2.57
4375 6439 4.585955 AGCAGATTTCATCATTCATGGC 57.414 40.909 0.00 0.00 32.64 4.40
4379 6443 9.788889 ACTGATAATAGCAGATTTCATCATTCA 57.211 29.630 12.88 0.00 36.86 2.57
4386 6450 9.982651 GGTTACTACTGATAATAGCAGATTTCA 57.017 33.333 12.88 0.00 36.86 2.69
4414 6490 3.706594 TGCTAGAGCTGTTGCCTATAGTT 59.293 43.478 14.32 0.00 42.66 2.24
4468 6544 2.693069 CAAGAGGCCTAGTTCAGTGTG 58.307 52.381 4.42 0.00 0.00 3.82
4500 6576 8.001875 TCTGCAAGAGACTCTTAGTATATCCTT 58.998 37.037 17.30 0.00 38.67 3.36
4501 6577 7.522542 TCTGCAAGAGACTCTTAGTATATCCT 58.477 38.462 17.30 0.00 38.67 3.24
4502 6578 7.753309 TCTGCAAGAGACTCTTAGTATATCC 57.247 40.000 17.30 0.78 38.67 2.59
4531 6607 9.509956 GCAAGAGACTCTTAGTATATCCTTAGA 57.490 37.037 17.30 0.00 33.78 2.10
4532 6608 9.290988 TGCAAGAGACTCTTAGTATATCCTTAG 57.709 37.037 17.30 2.16 33.78 2.18
4533 6609 9.290988 CTGCAAGAGACTCTTAGTATATCCTTA 57.709 37.037 17.30 0.00 33.78 2.69
4534 6610 8.001875 TCTGCAAGAGACTCTTAGTATATCCTT 58.998 37.037 17.30 0.00 38.67 3.36
4535 6611 7.522542 TCTGCAAGAGACTCTTAGTATATCCT 58.477 38.462 17.30 0.00 38.67 3.24
4536 6612 7.753309 TCTGCAAGAGACTCTTAGTATATCC 57.247 40.000 17.30 0.78 38.67 2.59
4577 6653 6.183360 TGCCAGTTTACAATTGCAACTCTTAA 60.183 34.615 16.97 0.63 0.00 1.85
4734 6811 7.832685 ACTATCACCTCTGTGCGGTATAATATA 59.167 37.037 0.00 0.00 42.46 0.86
4735 6812 6.663953 ACTATCACCTCTGTGCGGTATAATAT 59.336 38.462 0.00 0.00 42.46 1.28
4736 6813 6.008331 ACTATCACCTCTGTGCGGTATAATA 58.992 40.000 0.00 0.00 42.46 0.98
4737 6814 4.833380 ACTATCACCTCTGTGCGGTATAAT 59.167 41.667 0.00 0.00 42.46 1.28
4738 6815 4.212716 ACTATCACCTCTGTGCGGTATAA 58.787 43.478 0.00 0.00 42.46 0.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.