Multiple sequence alignment - TraesCS5A01G140100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G140100 chr5A 100.000 2531 0 0 1 2531 312260447 312257917 0.000000e+00 4674
1 TraesCS5A01G140100 chr5A 98.571 420 6 0 2112 2531 88565948 88566367 0.000000e+00 743
2 TraesCS5A01G140100 chr3D 92.066 1941 109 19 4 1936 124068891 124066988 0.000000e+00 2689
3 TraesCS5A01G140100 chr3D 88.163 1960 160 21 1 1936 479622502 479624413 0.000000e+00 2268
4 TraesCS5A01G140100 chr4D 92.021 1930 121 13 23 1936 460670216 460668304 0.000000e+00 2680
5 TraesCS5A01G140100 chr7D 90.000 1970 153 17 1 1934 501629264 501631225 0.000000e+00 2507
6 TraesCS5A01G140100 chr7D 88.640 1963 147 30 1 1936 568007717 568005804 0.000000e+00 2320
7 TraesCS5A01G140100 chr7A 93.243 1628 93 2 23 1649 25850349 25851960 0.000000e+00 2381
8 TraesCS5A01G140100 chr5B 88.094 1957 180 26 1 1939 680629118 680627197 0.000000e+00 2274
9 TraesCS5A01G140100 chr5B 96.591 88 3 0 2023 2110 257023394 257023307 2.030000e-31 147
10 TraesCS5A01G140100 chr1D 91.662 1619 111 12 335 1936 467504891 467506502 0.000000e+00 2220
11 TraesCS5A01G140100 chr3A 90.681 1674 127 11 1 1665 598875589 598873936 0.000000e+00 2200
12 TraesCS5A01G140100 chr3A 86.917 1972 174 30 4 1951 113367285 113365374 0.000000e+00 2135
13 TraesCS5A01G140100 chr3A 90.414 1617 130 13 338 1934 145634067 145635678 0.000000e+00 2104
14 TraesCS5A01G140100 chr6D 92.437 1547 98 10 20 1563 56319347 56320877 0.000000e+00 2191
15 TraesCS5A01G140100 chr6D 93.069 1111 71 5 23 1132 11696793 11695688 0.000000e+00 1620
16 TraesCS5A01G140100 chr6D 90.750 800 39 7 1160 1941 11695360 11694578 0.000000e+00 1035
17 TraesCS5A01G140100 chr6B 86.357 1957 210 31 1 1943 671866927 671865014 0.000000e+00 2082
18 TraesCS5A01G140100 chr5D 92.557 927 62 5 1 926 347389836 347388916 0.000000e+00 1323
19 TraesCS5A01G140100 chr5D 87.000 100 7 4 2011 2110 242026979 242026886 9.570000e-20 108
20 TraesCS5A01G140100 chrUn 89.919 744 59 13 1194 1936 386164734 386165462 0.000000e+00 944
21 TraesCS5A01G140100 chr2B 81.879 1043 122 28 17 1042 110000010 110001002 0.000000e+00 817
22 TraesCS5A01G140100 chr2B 87.150 428 33 6 2112 2531 522815846 522816259 1.370000e-127 466


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G140100 chr5A 312257917 312260447 2530 True 4674.0 4674 100.0000 1 2531 1 chr5A.!!$R1 2530
1 TraesCS5A01G140100 chr3D 124066988 124068891 1903 True 2689.0 2689 92.0660 4 1936 1 chr3D.!!$R1 1932
2 TraesCS5A01G140100 chr3D 479622502 479624413 1911 False 2268.0 2268 88.1630 1 1936 1 chr3D.!!$F1 1935
3 TraesCS5A01G140100 chr4D 460668304 460670216 1912 True 2680.0 2680 92.0210 23 1936 1 chr4D.!!$R1 1913
4 TraesCS5A01G140100 chr7D 501629264 501631225 1961 False 2507.0 2507 90.0000 1 1934 1 chr7D.!!$F1 1933
5 TraesCS5A01G140100 chr7D 568005804 568007717 1913 True 2320.0 2320 88.6400 1 1936 1 chr7D.!!$R1 1935
6 TraesCS5A01G140100 chr7A 25850349 25851960 1611 False 2381.0 2381 93.2430 23 1649 1 chr7A.!!$F1 1626
7 TraesCS5A01G140100 chr5B 680627197 680629118 1921 True 2274.0 2274 88.0940 1 1939 1 chr5B.!!$R2 1938
8 TraesCS5A01G140100 chr1D 467504891 467506502 1611 False 2220.0 2220 91.6620 335 1936 1 chr1D.!!$F1 1601
9 TraesCS5A01G140100 chr3A 598873936 598875589 1653 True 2200.0 2200 90.6810 1 1665 1 chr3A.!!$R2 1664
10 TraesCS5A01G140100 chr3A 113365374 113367285 1911 True 2135.0 2135 86.9170 4 1951 1 chr3A.!!$R1 1947
11 TraesCS5A01G140100 chr3A 145634067 145635678 1611 False 2104.0 2104 90.4140 338 1934 1 chr3A.!!$F1 1596
12 TraesCS5A01G140100 chr6D 56319347 56320877 1530 False 2191.0 2191 92.4370 20 1563 1 chr6D.!!$F1 1543
13 TraesCS5A01G140100 chr6D 11694578 11696793 2215 True 1327.5 1620 91.9095 23 1941 2 chr6D.!!$R1 1918
14 TraesCS5A01G140100 chr6B 671865014 671866927 1913 True 2082.0 2082 86.3570 1 1943 1 chr6B.!!$R1 1942
15 TraesCS5A01G140100 chr5D 347388916 347389836 920 True 1323.0 1323 92.5570 1 926 1 chr5D.!!$R2 925
16 TraesCS5A01G140100 chrUn 386164734 386165462 728 False 944.0 944 89.9190 1194 1936 1 chrUn.!!$F1 742
17 TraesCS5A01G140100 chr2B 110000010 110001002 992 False 817.0 817 81.8790 17 1042 1 chr2B.!!$F1 1025

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
369 545 0.884704 GTGCACCGCTTCTTCTTCCA 60.885 55.0 5.22 0.0 0.0 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2057 2567 0.034756 TGTACGCAATCCAGTGCAGT 59.965 50.0 0.0 0.0 45.19 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 63 2.429383 GGAGGGGAATGGGGAATAGAGA 60.429 54.545 0.00 0.00 0.00 3.10
147 254 1.063717 GGAATGCAGAAGGGGGATTGA 60.064 52.381 0.00 0.00 0.00 2.57
161 284 1.505098 GGATTGAGGGATTGGGGGATT 59.495 52.381 0.00 0.00 0.00 3.01
178 332 2.506444 GATTGGGGGTACACAACGAAA 58.494 47.619 0.00 0.00 30.21 3.46
185 340 1.261354 GGTACACAACGAAAACCGGTC 59.739 52.381 8.04 0.00 43.93 4.79
242 413 1.448540 CGAGCCGCTGACCTTCATT 60.449 57.895 0.00 0.00 0.00 2.57
369 545 0.884704 GTGCACCGCTTCTTCTTCCA 60.885 55.000 5.22 0.00 0.00 3.53
400 576 4.129737 CCCAGCGATGACCGTCGT 62.130 66.667 0.06 0.00 43.27 4.34
455 631 1.223487 GCGGTCATTAGGAGCCCAA 59.777 57.895 0.00 0.00 40.99 4.12
540 717 2.079158 CCAGCGAATGATGTCAACTGT 58.921 47.619 0.00 0.00 0.00 3.55
547 724 2.453983 TGATGTCAACTGTCATCGCA 57.546 45.000 10.83 0.00 41.36 5.10
601 778 4.471386 AGCTCTTCTTTAGTGGCCTTCATA 59.529 41.667 3.32 0.00 0.00 2.15
807 984 3.906846 AGGAAGGTTGACAGTGAGAGAAT 59.093 43.478 0.00 0.00 0.00 2.40
1059 1249 2.960384 CAAGCATGCCCTTCATCCAATA 59.040 45.455 15.66 0.00 31.79 1.90
1063 1253 1.607225 TGCCCTTCATCCAATACCCT 58.393 50.000 0.00 0.00 0.00 4.34
1100 1290 2.342279 CACCGCCGAAGAAGACCA 59.658 61.111 0.00 0.00 0.00 4.02
1216 1707 1.998315 CTCACTTCTGCAAGGTCATCG 59.002 52.381 0.00 0.00 33.37 3.84
1263 1754 1.152830 GCCCCTGGACTTCACCAAA 59.847 57.895 0.00 0.00 39.59 3.28
1269 1760 3.023832 CCTGGACTTCACCAAACACTTT 58.976 45.455 0.00 0.00 39.59 2.66
1313 1804 0.320374 CTCAGGAACAACACCGGCTA 59.680 55.000 0.00 0.00 0.00 3.93
1482 1973 2.545742 CGACGATGATGGCATTGAGGTA 60.546 50.000 0.00 0.00 38.02 3.08
1553 2044 2.436109 GGCCACCTCTTTCCAGCA 59.564 61.111 0.00 0.00 0.00 4.41
1699 2208 2.616524 TGGTAACCTCACCAACTAGCT 58.383 47.619 0.00 0.00 45.65 3.32
1746 2255 2.961741 TGCATACAACCAAACACCATGT 59.038 40.909 0.00 0.00 0.00 3.21
1818 2328 0.112995 TGCCCATGCAGAAAAGAGGT 59.887 50.000 0.00 0.00 44.23 3.85
1823 2333 3.087031 CCATGCAGAAAAGAGGTCATGT 58.913 45.455 0.00 0.00 31.93 3.21
1902 2412 9.201989 AGATTGAGTGGAGAAGTGTATGTAATA 57.798 33.333 0.00 0.00 0.00 0.98
1936 2446 3.893763 CGGCAACCAAACACGCCA 61.894 61.111 0.00 0.00 45.14 5.69
1943 2453 2.487762 CAACCAAACACGCCATAGATGT 59.512 45.455 0.00 0.00 0.00 3.06
1944 2454 2.790433 ACCAAACACGCCATAGATGTT 58.210 42.857 0.00 0.00 38.18 2.71
1951 2461 3.183754 CACGCCATAGATGTTCGTTGTA 58.816 45.455 4.86 0.00 34.49 2.41
1952 2462 3.802139 CACGCCATAGATGTTCGTTGTAT 59.198 43.478 4.86 0.00 34.49 2.29
1953 2463 4.270084 CACGCCATAGATGTTCGTTGTATT 59.730 41.667 4.86 0.00 34.49 1.89
1954 2464 4.270084 ACGCCATAGATGTTCGTTGTATTG 59.730 41.667 2.47 0.00 33.49 1.90
1955 2465 4.270084 CGCCATAGATGTTCGTTGTATTGT 59.730 41.667 0.00 0.00 0.00 2.71
1956 2466 5.220586 CGCCATAGATGTTCGTTGTATTGTT 60.221 40.000 0.00 0.00 0.00 2.83
1957 2467 6.019398 CGCCATAGATGTTCGTTGTATTGTTA 60.019 38.462 0.00 0.00 0.00 2.41
1958 2468 7.307160 CGCCATAGATGTTCGTTGTATTGTTAT 60.307 37.037 0.00 0.00 0.00 1.89
1959 2469 8.984764 GCCATAGATGTTCGTTGTATTGTTATA 58.015 33.333 0.00 0.00 0.00 0.98
2012 2522 2.755952 AAAAACAGAAGGGAGGCAGT 57.244 45.000 0.00 0.00 0.00 4.40
2013 2523 3.876309 AAAAACAGAAGGGAGGCAGTA 57.124 42.857 0.00 0.00 0.00 2.74
2014 2524 3.425162 AAAACAGAAGGGAGGCAGTAG 57.575 47.619 0.00 0.00 0.00 2.57
2015 2525 0.615850 AACAGAAGGGAGGCAGTAGC 59.384 55.000 0.00 0.00 41.10 3.58
2016 2526 0.252467 ACAGAAGGGAGGCAGTAGCT 60.252 55.000 0.00 0.00 41.70 3.32
2017 2527 0.177604 CAGAAGGGAGGCAGTAGCTG 59.822 60.000 0.00 0.00 41.70 4.24
2026 2536 3.479370 CAGTAGCTGCCAAGACGC 58.521 61.111 0.00 0.00 0.00 5.19
2027 2537 2.103042 CAGTAGCTGCCAAGACGCC 61.103 63.158 0.00 0.00 0.00 5.68
2028 2538 2.047274 GTAGCTGCCAAGACGCCA 60.047 61.111 0.00 0.00 0.00 5.69
2029 2539 2.047274 TAGCTGCCAAGACGCCAC 60.047 61.111 0.00 0.00 0.00 5.01
2030 2540 2.878089 TAGCTGCCAAGACGCCACA 61.878 57.895 0.00 0.00 0.00 4.17
2031 2541 2.390306 TAGCTGCCAAGACGCCACAA 62.390 55.000 0.00 0.00 0.00 3.33
2032 2542 2.949106 CTGCCAAGACGCCACAAG 59.051 61.111 0.00 0.00 0.00 3.16
2033 2543 1.893808 CTGCCAAGACGCCACAAGT 60.894 57.895 0.00 0.00 0.00 3.16
2034 2544 1.447317 CTGCCAAGACGCCACAAGTT 61.447 55.000 0.00 0.00 0.00 2.66
2035 2545 1.282875 GCCAAGACGCCACAAGTTC 59.717 57.895 0.00 0.00 0.00 3.01
2036 2546 1.949257 CCAAGACGCCACAAGTTCC 59.051 57.895 0.00 0.00 0.00 3.62
2037 2547 0.817634 CCAAGACGCCACAAGTTCCA 60.818 55.000 0.00 0.00 0.00 3.53
2038 2548 0.307760 CAAGACGCCACAAGTTCCAC 59.692 55.000 0.00 0.00 0.00 4.02
2039 2549 0.180406 AAGACGCCACAAGTTCCACT 59.820 50.000 0.00 0.00 0.00 4.00
2040 2550 0.180406 AGACGCCACAAGTTCCACTT 59.820 50.000 0.00 0.00 39.39 3.16
2041 2551 0.586802 GACGCCACAAGTTCCACTTC 59.413 55.000 0.00 0.00 36.03 3.01
2042 2552 0.180406 ACGCCACAAGTTCCACTTCT 59.820 50.000 0.00 0.00 36.03 2.85
2043 2553 0.868406 CGCCACAAGTTCCACTTCTC 59.132 55.000 0.00 0.00 36.03 2.87
2044 2554 1.541233 CGCCACAAGTTCCACTTCTCT 60.541 52.381 0.00 0.00 36.03 3.10
2045 2555 2.288825 CGCCACAAGTTCCACTTCTCTA 60.289 50.000 0.00 0.00 36.03 2.43
2046 2556 3.067833 GCCACAAGTTCCACTTCTCTAC 58.932 50.000 0.00 0.00 36.03 2.59
2047 2557 3.318017 CCACAAGTTCCACTTCTCTACG 58.682 50.000 0.00 0.00 36.03 3.51
2048 2558 3.243771 CCACAAGTTCCACTTCTCTACGT 60.244 47.826 0.00 0.00 36.03 3.57
2049 2559 4.369182 CACAAGTTCCACTTCTCTACGTT 58.631 43.478 0.00 0.00 36.03 3.99
2050 2560 4.209288 CACAAGTTCCACTTCTCTACGTTG 59.791 45.833 0.00 0.00 36.03 4.10
2051 2561 3.662247 AGTTCCACTTCTCTACGTTGG 57.338 47.619 0.00 0.00 0.00 3.77
2052 2562 2.299297 AGTTCCACTTCTCTACGTTGGG 59.701 50.000 0.00 0.00 0.00 4.12
2053 2563 0.606604 TCCACTTCTCTACGTTGGGC 59.393 55.000 0.00 0.00 0.00 5.36
2055 2565 1.080025 ACTTCTCTACGTTGGGCGC 60.080 57.895 0.00 0.00 46.11 6.53
2056 2566 1.215647 CTTCTCTACGTTGGGCGCT 59.784 57.895 7.64 0.00 46.11 5.92
2057 2567 0.454600 CTTCTCTACGTTGGGCGCTA 59.545 55.000 7.64 0.00 46.11 4.26
2058 2568 0.171903 TTCTCTACGTTGGGCGCTAC 59.828 55.000 7.64 5.28 46.11 3.58
2059 2569 0.679002 TCTCTACGTTGGGCGCTACT 60.679 55.000 7.64 3.78 46.11 2.57
2060 2570 0.525668 CTCTACGTTGGGCGCTACTG 60.526 60.000 7.64 9.08 46.11 2.74
2061 2571 2.125832 TACGTTGGGCGCTACTGC 60.126 61.111 7.64 0.00 46.11 4.40
2062 2572 2.829043 CTACGTTGGGCGCTACTGCA 62.829 60.000 7.64 0.00 46.11 4.41
2063 2573 3.788766 CGTTGGGCGCTACTGCAC 61.789 66.667 7.64 0.00 39.64 4.57
2064 2574 2.358737 GTTGGGCGCTACTGCACT 60.359 61.111 7.64 0.00 39.64 4.40
2065 2575 2.358615 TTGGGCGCTACTGCACTG 60.359 61.111 7.64 0.00 39.64 3.66
2066 2576 3.899981 TTGGGCGCTACTGCACTGG 62.900 63.158 7.64 0.00 39.64 4.00
2067 2577 4.082523 GGGCGCTACTGCACTGGA 62.083 66.667 7.64 0.00 39.64 3.86
2068 2578 2.187946 GGCGCTACTGCACTGGAT 59.812 61.111 7.64 0.00 39.64 3.41
2069 2579 1.450312 GGCGCTACTGCACTGGATT 60.450 57.895 7.64 0.00 39.64 3.01
2070 2580 1.709147 GGCGCTACTGCACTGGATTG 61.709 60.000 7.64 0.00 39.64 2.67
2071 2581 1.717937 CGCTACTGCACTGGATTGC 59.282 57.895 0.00 0.00 43.31 3.56
2072 2582 1.717937 GCTACTGCACTGGATTGCG 59.282 57.895 0.00 0.00 46.20 4.85
2073 2583 1.021390 GCTACTGCACTGGATTGCGT 61.021 55.000 0.00 0.00 46.20 5.24
2074 2584 1.739035 GCTACTGCACTGGATTGCGTA 60.739 52.381 0.00 0.00 46.20 4.42
2075 2585 1.927174 CTACTGCACTGGATTGCGTAC 59.073 52.381 0.00 0.00 46.20 3.67
2076 2586 0.034756 ACTGCACTGGATTGCGTACA 59.965 50.000 0.00 0.00 46.20 2.90
2077 2587 0.723414 CTGCACTGGATTGCGTACAG 59.277 55.000 0.00 0.00 46.20 2.74
2078 2588 1.298157 TGCACTGGATTGCGTACAGC 61.298 55.000 1.27 0.00 43.08 4.40
2079 2589 1.021390 GCACTGGATTGCGTACAGCT 61.021 55.000 10.27 0.00 43.08 4.24
2080 2590 1.002366 CACTGGATTGCGTACAGCTC 58.998 55.000 10.27 2.17 43.08 4.09
2081 2591 0.458543 ACTGGATTGCGTACAGCTCG 60.459 55.000 10.27 0.00 43.08 5.03
2082 2592 2.824640 ACTGGATTGCGTACAGCTCGA 61.825 52.381 10.27 0.00 43.08 4.04
2083 2593 4.103769 ACTGGATTGCGTACAGCTCGAT 62.104 50.000 10.27 3.55 43.08 3.59
2084 2594 5.877572 ACTGGATTGCGTACAGCTCGATC 62.878 52.174 10.27 10.08 43.08 3.69
2087 2597 3.891008 GCGTACAGCTCGATCGTC 58.109 61.111 15.94 8.44 44.04 4.20
2088 2598 1.999289 GCGTACAGCTCGATCGTCG 60.999 63.158 15.94 8.81 44.04 5.12
2089 2599 1.367782 CGTACAGCTCGATCGTCGG 60.368 63.158 15.94 11.23 40.88 4.79
2090 2600 1.720301 GTACAGCTCGATCGTCGGT 59.280 57.895 15.94 16.03 40.88 4.69
2091 2601 0.098376 GTACAGCTCGATCGTCGGTT 59.902 55.000 15.94 2.23 40.88 4.44
2092 2602 0.098200 TACAGCTCGATCGTCGGTTG 59.902 55.000 15.94 15.64 40.88 3.77
2093 2603 2.202623 AGCTCGATCGTCGGTTGC 60.203 61.111 15.94 10.65 40.88 4.17
2094 2604 3.607987 GCTCGATCGTCGGTTGCG 61.608 66.667 15.94 0.00 40.88 4.85
2095 2605 2.949678 CTCGATCGTCGGTTGCGG 60.950 66.667 15.94 0.00 40.88 5.69
2096 2606 3.678717 CTCGATCGTCGGTTGCGGT 62.679 63.158 15.94 0.00 40.88 5.68
2097 2607 3.541831 CGATCGTCGGTTGCGGTG 61.542 66.667 7.03 0.00 36.00 4.94
2098 2608 3.186047 GATCGTCGGTTGCGGTGG 61.186 66.667 0.00 0.00 0.00 4.61
2115 2625 4.415332 GCTCCGTCACGCCGAGAA 62.415 66.667 7.57 0.00 0.00 2.87
2116 2626 2.504244 CTCCGTCACGCCGAGAAC 60.504 66.667 0.00 0.00 0.00 3.01
2117 2627 4.394078 TCCGTCACGCCGAGAACG 62.394 66.667 0.00 0.00 39.43 3.95
2118 2628 4.695231 CCGTCACGCCGAGAACGT 62.695 66.667 0.00 0.00 46.42 3.99
2119 2629 2.174107 CGTCACGCCGAGAACGTA 59.826 61.111 0.00 0.00 42.96 3.57
2120 2630 1.226211 CGTCACGCCGAGAACGTAT 60.226 57.895 0.00 0.00 42.96 3.06
2121 2631 1.192436 CGTCACGCCGAGAACGTATC 61.192 60.000 0.00 0.00 42.96 2.24
2122 2632 0.864797 GTCACGCCGAGAACGTATCC 60.865 60.000 0.00 0.00 42.96 2.59
2123 2633 1.588139 CACGCCGAGAACGTATCCC 60.588 63.158 0.00 0.00 42.96 3.85
2124 2634 2.048023 ACGCCGAGAACGTATCCCA 61.048 57.895 0.00 0.00 43.02 4.37
2125 2635 1.362717 CGCCGAGAACGTATCCCAT 59.637 57.895 0.00 0.00 37.88 4.00
2126 2636 0.939577 CGCCGAGAACGTATCCCATG 60.940 60.000 0.00 0.00 37.88 3.66
2127 2637 1.222115 GCCGAGAACGTATCCCATGC 61.222 60.000 0.00 0.00 37.88 4.06
2128 2638 0.104120 CCGAGAACGTATCCCATGCA 59.896 55.000 0.00 0.00 37.88 3.96
2129 2639 1.472552 CCGAGAACGTATCCCATGCAA 60.473 52.381 0.00 0.00 37.88 4.08
2130 2640 1.593006 CGAGAACGTATCCCATGCAAC 59.407 52.381 0.00 0.00 34.56 4.17
2131 2641 1.593006 GAGAACGTATCCCATGCAACG 59.407 52.381 4.88 4.88 40.99 4.10
2132 2642 1.206132 AGAACGTATCCCATGCAACGA 59.794 47.619 12.89 0.00 38.64 3.85
2133 2643 2.004017 GAACGTATCCCATGCAACGAA 58.996 47.619 12.89 0.00 38.64 3.85
2134 2644 1.365699 ACGTATCCCATGCAACGAAC 58.634 50.000 12.89 0.00 38.64 3.95
2135 2645 1.066430 ACGTATCCCATGCAACGAACT 60.066 47.619 12.89 0.00 38.64 3.01
2136 2646 2.166870 ACGTATCCCATGCAACGAACTA 59.833 45.455 12.89 0.00 38.64 2.24
2137 2647 3.191669 CGTATCCCATGCAACGAACTAA 58.808 45.455 0.06 0.00 37.53 2.24
2138 2648 3.807622 CGTATCCCATGCAACGAACTAAT 59.192 43.478 0.06 0.00 37.53 1.73
2139 2649 4.084537 CGTATCCCATGCAACGAACTAATC 60.085 45.833 0.06 0.00 37.53 1.75
2150 2660 2.380084 GAACTAATCGGTGCACCAGA 57.620 50.000 34.16 29.26 35.14 3.86
2151 2661 2.906354 GAACTAATCGGTGCACCAGAT 58.094 47.619 34.16 30.00 35.14 2.90
2152 2662 2.315925 ACTAATCGGTGCACCAGATG 57.684 50.000 34.16 24.25 35.14 2.90
2161 2671 2.580815 CACCAGATGCTCCAGCGA 59.419 61.111 0.00 0.00 45.83 4.93
2162 2672 1.812922 CACCAGATGCTCCAGCGAC 60.813 63.158 0.00 0.00 45.83 5.19
2163 2673 1.986757 ACCAGATGCTCCAGCGACT 60.987 57.895 0.00 0.00 45.83 4.18
2164 2674 1.220206 CCAGATGCTCCAGCGACTT 59.780 57.895 0.00 0.00 45.83 3.01
2165 2675 0.809241 CCAGATGCTCCAGCGACTTC 60.809 60.000 0.00 0.00 45.83 3.01
2166 2676 0.175302 CAGATGCTCCAGCGACTTCT 59.825 55.000 0.00 0.00 45.83 2.85
2167 2677 0.175302 AGATGCTCCAGCGACTTCTG 59.825 55.000 0.00 0.00 45.83 3.02
2172 2682 2.125912 CCAGCGACTTCTGGTCCG 60.126 66.667 1.80 0.00 46.59 4.79
2173 2683 2.651361 CAGCGACTTCTGGTCCGT 59.349 61.111 0.00 0.00 41.64 4.69
2174 2684 1.006102 CAGCGACTTCTGGTCCGTT 60.006 57.895 0.00 0.00 41.64 4.44
2175 2685 0.242825 CAGCGACTTCTGGTCCGTTA 59.757 55.000 0.00 0.00 41.64 3.18
2176 2686 0.526662 AGCGACTTCTGGTCCGTTAG 59.473 55.000 0.00 0.00 41.64 2.34
2177 2687 0.524862 GCGACTTCTGGTCCGTTAGA 59.475 55.000 0.00 0.00 41.64 2.10
2178 2688 1.134560 GCGACTTCTGGTCCGTTAGAT 59.865 52.381 0.00 0.00 41.64 1.98
2179 2689 2.416972 GCGACTTCTGGTCCGTTAGATT 60.417 50.000 0.00 0.00 41.64 2.40
2180 2690 3.179830 CGACTTCTGGTCCGTTAGATTG 58.820 50.000 0.00 0.00 41.64 2.67
2181 2691 3.119602 CGACTTCTGGTCCGTTAGATTGA 60.120 47.826 0.00 0.00 41.64 2.57
2182 2692 4.425520 GACTTCTGGTCCGTTAGATTGAG 58.574 47.826 0.00 0.00 38.93 3.02
2183 2693 4.087182 ACTTCTGGTCCGTTAGATTGAGA 58.913 43.478 0.00 0.00 0.00 3.27
2184 2694 4.527038 ACTTCTGGTCCGTTAGATTGAGAA 59.473 41.667 0.00 0.00 0.00 2.87
2185 2695 5.187967 ACTTCTGGTCCGTTAGATTGAGAAT 59.812 40.000 0.00 0.00 0.00 2.40
2186 2696 5.011090 TCTGGTCCGTTAGATTGAGAATG 57.989 43.478 0.00 0.00 0.00 2.67
2187 2697 4.709886 TCTGGTCCGTTAGATTGAGAATGA 59.290 41.667 0.00 0.00 0.00 2.57
2188 2698 5.186992 TCTGGTCCGTTAGATTGAGAATGAA 59.813 40.000 0.00 0.00 0.00 2.57
2189 2699 5.419542 TGGTCCGTTAGATTGAGAATGAAG 58.580 41.667 0.00 0.00 0.00 3.02
2190 2700 4.811557 GGTCCGTTAGATTGAGAATGAAGG 59.188 45.833 0.00 0.00 0.00 3.46
2191 2701 4.811557 GTCCGTTAGATTGAGAATGAAGGG 59.188 45.833 0.00 0.00 0.00 3.95
2192 2702 4.714802 TCCGTTAGATTGAGAATGAAGGGA 59.285 41.667 0.00 0.00 0.00 4.20
2193 2703 4.811557 CCGTTAGATTGAGAATGAAGGGAC 59.188 45.833 0.00 0.00 0.00 4.46
2194 2704 5.419542 CGTTAGATTGAGAATGAAGGGACA 58.580 41.667 0.00 0.00 0.00 4.02
2195 2705 5.874810 CGTTAGATTGAGAATGAAGGGACAA 59.125 40.000 0.00 0.00 0.00 3.18
2196 2706 6.036517 CGTTAGATTGAGAATGAAGGGACAAG 59.963 42.308 0.00 0.00 0.00 3.16
2197 2707 5.768980 AGATTGAGAATGAAGGGACAAGA 57.231 39.130 0.00 0.00 0.00 3.02
2198 2708 6.324601 AGATTGAGAATGAAGGGACAAGAT 57.675 37.500 0.00 0.00 0.00 2.40
2199 2709 6.355747 AGATTGAGAATGAAGGGACAAGATC 58.644 40.000 0.00 0.00 0.00 2.75
2200 2710 5.768980 TTGAGAATGAAGGGACAAGATCT 57.231 39.130 0.00 0.00 0.00 2.75
2201 2711 6.874278 TTGAGAATGAAGGGACAAGATCTA 57.126 37.500 0.00 0.00 0.00 1.98
2202 2712 6.477053 TGAGAATGAAGGGACAAGATCTAG 57.523 41.667 0.00 0.00 0.00 2.43
2203 2713 5.365025 TGAGAATGAAGGGACAAGATCTAGG 59.635 44.000 0.00 0.00 0.00 3.02
2204 2714 4.102367 AGAATGAAGGGACAAGATCTAGGC 59.898 45.833 0.00 0.00 0.00 3.93
2205 2715 2.832838 TGAAGGGACAAGATCTAGGCA 58.167 47.619 0.00 0.00 0.00 4.75
2206 2716 2.501723 TGAAGGGACAAGATCTAGGCAC 59.498 50.000 0.00 0.00 0.00 5.01
2207 2717 2.254152 AGGGACAAGATCTAGGCACA 57.746 50.000 0.00 0.00 0.00 4.57
2208 2718 2.769209 AGGGACAAGATCTAGGCACAT 58.231 47.619 0.00 0.00 0.00 3.21
2209 2719 2.437281 AGGGACAAGATCTAGGCACATG 59.563 50.000 0.00 0.00 0.00 3.21
2210 2720 2.171448 GGGACAAGATCTAGGCACATGT 59.829 50.000 0.00 0.00 0.00 3.21
2211 2721 3.370953 GGGACAAGATCTAGGCACATGTT 60.371 47.826 0.00 0.00 0.00 2.71
2212 2722 3.624861 GGACAAGATCTAGGCACATGTTG 59.375 47.826 0.00 0.00 31.24 3.33
2213 2723 3.614092 ACAAGATCTAGGCACATGTTGG 58.386 45.455 0.00 0.00 29.57 3.77
2214 2724 2.947652 CAAGATCTAGGCACATGTTGGG 59.052 50.000 0.00 0.00 0.00 4.12
2215 2725 2.200081 AGATCTAGGCACATGTTGGGT 58.800 47.619 0.00 0.00 0.00 4.51
2216 2726 2.578021 AGATCTAGGCACATGTTGGGTT 59.422 45.455 0.00 0.00 0.00 4.11
2217 2727 2.198827 TCTAGGCACATGTTGGGTTG 57.801 50.000 0.00 0.00 0.00 3.77
2218 2728 0.527565 CTAGGCACATGTTGGGTTGC 59.472 55.000 0.00 0.00 0.00 4.17
2219 2729 0.112218 TAGGCACATGTTGGGTTGCT 59.888 50.000 0.00 0.00 0.00 3.91
2220 2730 1.005867 GGCACATGTTGGGTTGCTG 60.006 57.895 0.00 0.00 0.00 4.41
2221 2731 1.005867 GCACATGTTGGGTTGCTGG 60.006 57.895 0.00 0.00 0.00 4.85
2222 2732 1.005867 CACATGTTGGGTTGCTGGC 60.006 57.895 0.00 0.00 0.00 4.85
2223 2733 1.457267 ACATGTTGGGTTGCTGGCA 60.457 52.632 0.00 0.00 0.00 4.92
2224 2734 1.005867 CATGTTGGGTTGCTGGCAC 60.006 57.895 0.00 0.00 0.00 5.01
2225 2735 1.152483 ATGTTGGGTTGCTGGCACT 60.152 52.632 0.00 0.00 0.00 4.40
2226 2736 1.181098 ATGTTGGGTTGCTGGCACTC 61.181 55.000 0.00 0.00 0.00 3.51
2227 2737 1.529244 GTTGGGTTGCTGGCACTCT 60.529 57.895 0.00 0.00 0.00 3.24
2228 2738 1.109323 GTTGGGTTGCTGGCACTCTT 61.109 55.000 0.00 0.00 0.00 2.85
2229 2739 1.108727 TTGGGTTGCTGGCACTCTTG 61.109 55.000 0.00 0.00 0.00 3.02
2241 2751 2.486472 CACTCTTGCAGAATGGACCT 57.514 50.000 0.00 0.00 34.66 3.85
2242 2752 2.787994 CACTCTTGCAGAATGGACCTT 58.212 47.619 0.00 0.00 34.66 3.50
2243 2753 3.942829 CACTCTTGCAGAATGGACCTTA 58.057 45.455 0.00 0.00 34.66 2.69
2244 2754 4.521146 CACTCTTGCAGAATGGACCTTAT 58.479 43.478 0.00 0.00 34.66 1.73
2245 2755 4.334759 CACTCTTGCAGAATGGACCTTATG 59.665 45.833 0.00 0.00 34.66 1.90
2246 2756 4.018960 ACTCTTGCAGAATGGACCTTATGT 60.019 41.667 0.00 0.00 34.66 2.29
2247 2757 4.922206 TCTTGCAGAATGGACCTTATGTT 58.078 39.130 0.00 0.00 34.66 2.71
2248 2758 4.943705 TCTTGCAGAATGGACCTTATGTTC 59.056 41.667 0.00 0.00 34.66 3.18
2249 2759 4.574674 TGCAGAATGGACCTTATGTTCT 57.425 40.909 0.00 0.00 35.86 3.01
2250 2760 4.517285 TGCAGAATGGACCTTATGTTCTC 58.483 43.478 0.00 0.00 35.86 2.87
2251 2761 4.225942 TGCAGAATGGACCTTATGTTCTCT 59.774 41.667 0.00 0.00 35.86 3.10
2252 2762 4.813697 GCAGAATGGACCTTATGTTCTCTC 59.186 45.833 0.00 0.00 35.86 3.20
2253 2763 5.396213 GCAGAATGGACCTTATGTTCTCTCT 60.396 44.000 0.00 0.00 35.86 3.10
2254 2764 6.183360 GCAGAATGGACCTTATGTTCTCTCTA 60.183 42.308 0.00 0.00 35.86 2.43
2255 2765 7.633772 GCAGAATGGACCTTATGTTCTCTCTAA 60.634 40.741 0.00 0.00 35.86 2.10
2256 2766 8.428063 CAGAATGGACCTTATGTTCTCTCTAAT 58.572 37.037 0.00 0.00 0.00 1.73
2257 2767 8.997734 AGAATGGACCTTATGTTCTCTCTAATT 58.002 33.333 0.00 0.00 0.00 1.40
2258 2768 8.970859 AATGGACCTTATGTTCTCTCTAATTG 57.029 34.615 0.00 0.00 0.00 2.32
2259 2769 7.733773 TGGACCTTATGTTCTCTCTAATTGA 57.266 36.000 0.00 0.00 0.00 2.57
2260 2770 8.146053 TGGACCTTATGTTCTCTCTAATTGAA 57.854 34.615 0.00 0.00 0.00 2.69
2261 2771 8.041323 TGGACCTTATGTTCTCTCTAATTGAAC 58.959 37.037 0.00 0.00 40.09 3.18
2262 2772 7.222999 GGACCTTATGTTCTCTCTAATTGAACG 59.777 40.741 0.00 0.00 41.88 3.95
2263 2773 7.837863 ACCTTATGTTCTCTCTAATTGAACGA 58.162 34.615 0.00 0.00 41.88 3.85
2264 2774 8.311836 ACCTTATGTTCTCTCTAATTGAACGAA 58.688 33.333 0.00 0.00 41.88 3.85
2265 2775 8.596380 CCTTATGTTCTCTCTAATTGAACGAAC 58.404 37.037 0.00 0.00 41.88 3.95
2266 2776 9.360093 CTTATGTTCTCTCTAATTGAACGAACT 57.640 33.333 0.00 0.00 41.88 3.01
2267 2777 7.588143 ATGTTCTCTCTAATTGAACGAACTG 57.412 36.000 0.00 0.00 41.88 3.16
2268 2778 6.745116 TGTTCTCTCTAATTGAACGAACTGA 58.255 36.000 0.00 0.00 41.88 3.41
2269 2779 6.863645 TGTTCTCTCTAATTGAACGAACTGAG 59.136 38.462 0.00 0.00 41.88 3.35
2270 2780 5.403246 TCTCTCTAATTGAACGAACTGAGC 58.597 41.667 0.00 0.00 0.00 4.26
2271 2781 5.048013 TCTCTCTAATTGAACGAACTGAGCA 60.048 40.000 0.00 0.00 0.00 4.26
2272 2782 5.724328 TCTCTAATTGAACGAACTGAGCAT 58.276 37.500 0.00 0.00 0.00 3.79
2273 2783 5.578336 TCTCTAATTGAACGAACTGAGCATG 59.422 40.000 0.00 0.00 0.00 4.06
2274 2784 5.237815 TCTAATTGAACGAACTGAGCATGT 58.762 37.500 0.00 0.00 0.00 3.21
2275 2785 4.410492 AATTGAACGAACTGAGCATGTC 57.590 40.909 0.00 0.00 0.00 3.06
2276 2786 2.820059 TGAACGAACTGAGCATGTCT 57.180 45.000 0.00 0.00 0.00 3.41
2277 2787 2.677199 TGAACGAACTGAGCATGTCTC 58.323 47.619 9.41 9.41 42.23 3.36
2278 2788 2.297315 TGAACGAACTGAGCATGTCTCT 59.703 45.455 15.20 0.00 42.38 3.10
2279 2789 2.645730 ACGAACTGAGCATGTCTCTC 57.354 50.000 15.20 5.54 42.38 3.20
2280 2790 2.166829 ACGAACTGAGCATGTCTCTCT 58.833 47.619 15.20 0.00 42.38 3.10
2281 2791 2.560542 ACGAACTGAGCATGTCTCTCTT 59.439 45.455 15.20 8.32 42.38 2.85
2282 2792 3.178267 CGAACTGAGCATGTCTCTCTTC 58.822 50.000 15.20 13.49 42.38 2.87
2283 2793 3.520569 GAACTGAGCATGTCTCTCTTCC 58.479 50.000 15.20 2.20 42.38 3.46
2284 2794 2.818921 ACTGAGCATGTCTCTCTTCCT 58.181 47.619 15.20 0.00 42.38 3.36
2285 2795 2.760092 ACTGAGCATGTCTCTCTTCCTC 59.240 50.000 15.20 2.47 42.38 3.71
2286 2796 1.747924 TGAGCATGTCTCTCTTCCTCG 59.252 52.381 15.20 0.00 42.38 4.63
2287 2797 0.459489 AGCATGTCTCTCTTCCTCGC 59.541 55.000 0.00 0.00 0.00 5.03
2288 2798 0.459489 GCATGTCTCTCTTCCTCGCT 59.541 55.000 0.00 0.00 0.00 4.93
2289 2799 1.134848 GCATGTCTCTCTTCCTCGCTT 60.135 52.381 0.00 0.00 0.00 4.68
2290 2800 2.808244 CATGTCTCTCTTCCTCGCTTC 58.192 52.381 0.00 0.00 0.00 3.86
2291 2801 2.208132 TGTCTCTCTTCCTCGCTTCT 57.792 50.000 0.00 0.00 0.00 2.85
2292 2802 2.088423 TGTCTCTCTTCCTCGCTTCTC 58.912 52.381 0.00 0.00 0.00 2.87
2293 2803 2.290641 TGTCTCTCTTCCTCGCTTCTCT 60.291 50.000 0.00 0.00 0.00 3.10
2294 2804 2.752903 GTCTCTCTTCCTCGCTTCTCTT 59.247 50.000 0.00 0.00 0.00 2.85
2295 2805 2.752354 TCTCTCTTCCTCGCTTCTCTTG 59.248 50.000 0.00 0.00 0.00 3.02
2296 2806 2.491693 CTCTCTTCCTCGCTTCTCTTGT 59.508 50.000 0.00 0.00 0.00 3.16
2297 2807 3.687125 TCTCTTCCTCGCTTCTCTTGTA 58.313 45.455 0.00 0.00 0.00 2.41
2298 2808 3.440872 TCTCTTCCTCGCTTCTCTTGTAC 59.559 47.826 0.00 0.00 0.00 2.90
2299 2809 3.422796 TCTTCCTCGCTTCTCTTGTACT 58.577 45.455 0.00 0.00 0.00 2.73
2300 2810 3.827302 TCTTCCTCGCTTCTCTTGTACTT 59.173 43.478 0.00 0.00 0.00 2.24
2301 2811 4.281182 TCTTCCTCGCTTCTCTTGTACTTT 59.719 41.667 0.00 0.00 0.00 2.66
2302 2812 3.914312 TCCTCGCTTCTCTTGTACTTTG 58.086 45.455 0.00 0.00 0.00 2.77
2303 2813 2.996621 CCTCGCTTCTCTTGTACTTTGG 59.003 50.000 0.00 0.00 0.00 3.28
2304 2814 2.996621 CTCGCTTCTCTTGTACTTTGGG 59.003 50.000 0.00 0.00 0.00 4.12
2305 2815 2.631062 TCGCTTCTCTTGTACTTTGGGA 59.369 45.455 0.00 0.00 0.00 4.37
2306 2816 2.996621 CGCTTCTCTTGTACTTTGGGAG 59.003 50.000 0.00 0.00 0.00 4.30
2307 2817 3.306088 CGCTTCTCTTGTACTTTGGGAGA 60.306 47.826 0.00 0.00 0.00 3.71
2308 2818 4.621747 CGCTTCTCTTGTACTTTGGGAGAT 60.622 45.833 0.00 0.00 33.82 2.75
2309 2819 4.633565 GCTTCTCTTGTACTTTGGGAGATG 59.366 45.833 0.00 0.00 33.82 2.90
2310 2820 4.826274 TCTCTTGTACTTTGGGAGATGG 57.174 45.455 0.00 0.00 0.00 3.51
2311 2821 4.425772 TCTCTTGTACTTTGGGAGATGGA 58.574 43.478 0.00 0.00 0.00 3.41
2312 2822 5.032846 TCTCTTGTACTTTGGGAGATGGAT 58.967 41.667 0.00 0.00 0.00 3.41
2313 2823 5.488919 TCTCTTGTACTTTGGGAGATGGATT 59.511 40.000 0.00 0.00 0.00 3.01
2314 2824 6.672218 TCTCTTGTACTTTGGGAGATGGATTA 59.328 38.462 0.00 0.00 0.00 1.75
2315 2825 6.650120 TCTTGTACTTTGGGAGATGGATTAC 58.350 40.000 0.00 0.00 0.00 1.89
2316 2826 5.367945 TGTACTTTGGGAGATGGATTACC 57.632 43.478 0.00 0.00 0.00 2.85
2328 2838 3.502191 TGGATTACCAAATTTCAGCGC 57.498 42.857 0.00 0.00 43.91 5.92
2329 2839 2.165437 TGGATTACCAAATTTCAGCGCC 59.835 45.455 2.29 0.00 43.91 6.53
2330 2840 2.450160 GATTACCAAATTTCAGCGCCG 58.550 47.619 2.29 0.00 0.00 6.46
2331 2841 0.109504 TTACCAAATTTCAGCGCCGC 60.110 50.000 2.29 0.00 0.00 6.53
2332 2842 1.928706 TACCAAATTTCAGCGCCGCC 61.929 55.000 4.98 0.00 0.00 6.13
2333 2843 2.875711 CAAATTTCAGCGCCGCCG 60.876 61.111 4.98 0.00 37.57 6.46
2334 2844 3.361977 AAATTTCAGCGCCGCCGT 61.362 55.556 4.98 0.00 36.67 5.68
2335 2845 3.322706 AAATTTCAGCGCCGCCGTC 62.323 57.895 4.98 0.00 36.67 4.79
2336 2846 4.760047 ATTTCAGCGCCGCCGTCT 62.760 61.111 4.98 0.00 36.67 4.18
2344 2854 3.453679 GCCGCCGTCTCTCCTCTT 61.454 66.667 0.00 0.00 0.00 2.85
2345 2855 3.007973 GCCGCCGTCTCTCCTCTTT 62.008 63.158 0.00 0.00 0.00 2.52
2346 2856 1.592223 CCGCCGTCTCTCCTCTTTT 59.408 57.895 0.00 0.00 0.00 2.27
2347 2857 0.737715 CCGCCGTCTCTCCTCTTTTG 60.738 60.000 0.00 0.00 0.00 2.44
2348 2858 0.038159 CGCCGTCTCTCCTCTTTTGT 60.038 55.000 0.00 0.00 0.00 2.83
2349 2859 1.201647 CGCCGTCTCTCCTCTTTTGTA 59.798 52.381 0.00 0.00 0.00 2.41
2350 2860 2.608268 GCCGTCTCTCCTCTTTTGTAC 58.392 52.381 0.00 0.00 0.00 2.90
2351 2861 2.674462 GCCGTCTCTCCTCTTTTGTACC 60.674 54.545 0.00 0.00 0.00 3.34
2352 2862 2.561419 CCGTCTCTCCTCTTTTGTACCA 59.439 50.000 0.00 0.00 0.00 3.25
2353 2863 3.576648 CGTCTCTCCTCTTTTGTACCAC 58.423 50.000 0.00 0.00 0.00 4.16
2354 2864 3.614390 CGTCTCTCCTCTTTTGTACCACC 60.614 52.174 0.00 0.00 0.00 4.61
2355 2865 3.579151 GTCTCTCCTCTTTTGTACCACCT 59.421 47.826 0.00 0.00 0.00 4.00
2356 2866 3.578716 TCTCTCCTCTTTTGTACCACCTG 59.421 47.826 0.00 0.00 0.00 4.00
2357 2867 3.578716 CTCTCCTCTTTTGTACCACCTGA 59.421 47.826 0.00 0.00 0.00 3.86
2358 2868 3.578716 TCTCCTCTTTTGTACCACCTGAG 59.421 47.826 0.00 0.00 0.00 3.35
2359 2869 2.038557 TCCTCTTTTGTACCACCTGAGC 59.961 50.000 0.00 0.00 0.00 4.26
2360 2870 2.039084 CCTCTTTTGTACCACCTGAGCT 59.961 50.000 0.00 0.00 0.00 4.09
2361 2871 3.330267 CTCTTTTGTACCACCTGAGCTC 58.670 50.000 6.82 6.82 0.00 4.09
2362 2872 2.038557 TCTTTTGTACCACCTGAGCTCC 59.961 50.000 12.15 0.00 0.00 4.70
2363 2873 0.690762 TTTGTACCACCTGAGCTCCC 59.309 55.000 12.15 0.00 0.00 4.30
2364 2874 1.198759 TTGTACCACCTGAGCTCCCC 61.199 60.000 12.15 0.00 0.00 4.81
2365 2875 1.306226 GTACCACCTGAGCTCCCCT 60.306 63.158 12.15 0.00 0.00 4.79
2366 2876 1.001760 TACCACCTGAGCTCCCCTC 59.998 63.158 12.15 0.00 41.15 4.30
2367 2877 2.856039 TACCACCTGAGCTCCCCTCG 62.856 65.000 12.15 0.00 43.82 4.63
2368 2878 4.154347 CACCTGAGCTCCCCTCGC 62.154 72.222 12.15 0.00 43.82 5.03
2369 2879 4.390556 ACCTGAGCTCCCCTCGCT 62.391 66.667 12.15 0.00 43.82 4.93
2374 2884 3.336820 AGCTCCCCTCGCTCTCTA 58.663 61.111 0.00 0.00 30.49 2.43
2375 2885 1.850549 AGCTCCCCTCGCTCTCTAT 59.149 57.895 0.00 0.00 30.49 1.98
2376 2886 0.187361 AGCTCCCCTCGCTCTCTATT 59.813 55.000 0.00 0.00 30.49 1.73
2377 2887 0.316841 GCTCCCCTCGCTCTCTATTG 59.683 60.000 0.00 0.00 0.00 1.90
2378 2888 1.698506 CTCCCCTCGCTCTCTATTGT 58.301 55.000 0.00 0.00 0.00 2.71
2379 2889 2.865079 CTCCCCTCGCTCTCTATTGTA 58.135 52.381 0.00 0.00 0.00 2.41
2380 2890 3.223435 CTCCCCTCGCTCTCTATTGTAA 58.777 50.000 0.00 0.00 0.00 2.41
2381 2891 2.957006 TCCCCTCGCTCTCTATTGTAAC 59.043 50.000 0.00 0.00 0.00 2.50
2382 2892 2.693591 CCCCTCGCTCTCTATTGTAACA 59.306 50.000 0.00 0.00 0.00 2.41
2383 2893 3.132289 CCCCTCGCTCTCTATTGTAACAA 59.868 47.826 0.00 0.00 0.00 2.83
2384 2894 4.202264 CCCCTCGCTCTCTATTGTAACAAT 60.202 45.833 0.00 0.00 0.00 2.71
2385 2895 4.747108 CCCTCGCTCTCTATTGTAACAATG 59.253 45.833 0.00 0.00 0.00 2.82
2386 2896 5.352284 CCTCGCTCTCTATTGTAACAATGT 58.648 41.667 0.00 0.00 0.00 2.71
2387 2897 6.461092 CCCTCGCTCTCTATTGTAACAATGTA 60.461 42.308 0.00 0.00 0.00 2.29
2388 2898 6.638873 CCTCGCTCTCTATTGTAACAATGTAG 59.361 42.308 0.00 0.00 0.00 2.74
2389 2899 7.096884 TCGCTCTCTATTGTAACAATGTAGT 57.903 36.000 0.00 0.00 0.00 2.73
2390 2900 6.972901 TCGCTCTCTATTGTAACAATGTAGTG 59.027 38.462 0.00 0.00 0.00 2.74
2391 2901 6.972901 CGCTCTCTATTGTAACAATGTAGTGA 59.027 38.462 0.00 0.00 0.00 3.41
2392 2902 7.649705 CGCTCTCTATTGTAACAATGTAGTGAT 59.350 37.037 0.00 0.00 0.00 3.06
2393 2903 8.973378 GCTCTCTATTGTAACAATGTAGTGATC 58.027 37.037 0.00 0.00 0.00 2.92
2396 2906 9.469807 CTCTATTGTAACAATGTAGTGATCTCC 57.530 37.037 0.00 0.00 0.00 3.71
2397 2907 8.977412 TCTATTGTAACAATGTAGTGATCTCCA 58.023 33.333 0.00 0.00 0.00 3.86
2398 2908 9.770097 CTATTGTAACAATGTAGTGATCTCCAT 57.230 33.333 0.00 0.00 0.00 3.41
2399 2909 7.848223 TTGTAACAATGTAGTGATCTCCATG 57.152 36.000 0.00 0.00 0.00 3.66
2400 2910 6.946340 TGTAACAATGTAGTGATCTCCATGT 58.054 36.000 0.00 0.00 0.00 3.21
2401 2911 7.394016 TGTAACAATGTAGTGATCTCCATGTT 58.606 34.615 0.00 0.00 0.00 2.71
2402 2912 7.882791 TGTAACAATGTAGTGATCTCCATGTTT 59.117 33.333 0.00 0.00 0.00 2.83
2403 2913 6.992063 ACAATGTAGTGATCTCCATGTTTC 57.008 37.500 0.00 0.00 0.00 2.78
2404 2914 6.475504 ACAATGTAGTGATCTCCATGTTTCA 58.524 36.000 0.00 0.00 0.00 2.69
2405 2915 6.942005 ACAATGTAGTGATCTCCATGTTTCAA 59.058 34.615 0.00 0.00 0.00 2.69
2406 2916 7.448161 ACAATGTAGTGATCTCCATGTTTCAAA 59.552 33.333 0.00 0.00 0.00 2.69
2407 2917 8.464404 CAATGTAGTGATCTCCATGTTTCAAAT 58.536 33.333 0.00 0.00 0.00 2.32
2408 2918 8.585471 ATGTAGTGATCTCCATGTTTCAAATT 57.415 30.769 0.00 0.00 0.00 1.82
2409 2919 8.044060 TGTAGTGATCTCCATGTTTCAAATTC 57.956 34.615 0.00 0.00 0.00 2.17
2410 2920 7.665145 TGTAGTGATCTCCATGTTTCAAATTCA 59.335 33.333 0.00 0.00 0.00 2.57
2411 2921 7.528996 AGTGATCTCCATGTTTCAAATTCAA 57.471 32.000 0.00 0.00 0.00 2.69
2412 2922 7.373493 AGTGATCTCCATGTTTCAAATTCAAC 58.627 34.615 0.00 0.00 0.00 3.18
2413 2923 7.014518 AGTGATCTCCATGTTTCAAATTCAACA 59.985 33.333 0.00 1.51 37.31 3.33
2414 2924 7.816031 GTGATCTCCATGTTTCAAATTCAACAT 59.184 33.333 0.00 5.27 43.06 2.71
2415 2925 8.030692 TGATCTCCATGTTTCAAATTCAACATC 58.969 33.333 7.36 0.27 40.85 3.06
2416 2926 7.287512 TCTCCATGTTTCAAATTCAACATCA 57.712 32.000 7.36 0.02 40.85 3.07
2417 2927 7.147312 TCTCCATGTTTCAAATTCAACATCAC 58.853 34.615 7.36 0.00 40.85 3.06
2418 2928 6.222389 TCCATGTTTCAAATTCAACATCACC 58.778 36.000 7.36 0.00 40.85 4.02
2419 2929 5.118971 CCATGTTTCAAATTCAACATCACCG 59.881 40.000 7.36 0.00 40.85 4.94
2420 2930 5.506686 TGTTTCAAATTCAACATCACCGA 57.493 34.783 0.00 0.00 0.00 4.69
2421 2931 5.277825 TGTTTCAAATTCAACATCACCGAC 58.722 37.500 0.00 0.00 0.00 4.79
2422 2932 4.497473 TTCAAATTCAACATCACCGACC 57.503 40.909 0.00 0.00 0.00 4.79
2423 2933 3.750371 TCAAATTCAACATCACCGACCT 58.250 40.909 0.00 0.00 0.00 3.85
2424 2934 3.751175 TCAAATTCAACATCACCGACCTC 59.249 43.478 0.00 0.00 0.00 3.85
2425 2935 3.703001 AATTCAACATCACCGACCTCT 57.297 42.857 0.00 0.00 0.00 3.69
2426 2936 2.455674 TTCAACATCACCGACCTCTG 57.544 50.000 0.00 0.00 0.00 3.35
2427 2937 1.627864 TCAACATCACCGACCTCTGA 58.372 50.000 0.00 0.00 0.00 3.27
2428 2938 1.546029 TCAACATCACCGACCTCTGAG 59.454 52.381 0.00 0.00 0.00 3.35
2429 2939 1.546029 CAACATCACCGACCTCTGAGA 59.454 52.381 6.17 0.00 0.00 3.27
2430 2940 1.178276 ACATCACCGACCTCTGAGAC 58.822 55.000 6.17 0.00 0.00 3.36
2431 2941 0.099613 CATCACCGACCTCTGAGACG 59.900 60.000 6.17 11.13 0.00 4.18
2432 2942 0.035343 ATCACCGACCTCTGAGACGA 60.035 55.000 19.61 6.31 0.00 4.20
2433 2943 0.250597 TCACCGACCTCTGAGACGAA 60.251 55.000 19.61 7.40 0.00 3.85
2434 2944 0.109689 CACCGACCTCTGAGACGAAC 60.110 60.000 19.61 2.60 0.00 3.95
2435 2945 0.536687 ACCGACCTCTGAGACGAACA 60.537 55.000 19.61 0.00 0.00 3.18
2436 2946 0.109689 CCGACCTCTGAGACGAACAC 60.110 60.000 19.61 0.14 0.00 3.32
2437 2947 0.591659 CGACCTCTGAGACGAACACA 59.408 55.000 6.17 0.00 0.00 3.72
2438 2948 1.001706 CGACCTCTGAGACGAACACAA 60.002 52.381 6.17 0.00 0.00 3.33
2439 2949 2.667137 GACCTCTGAGACGAACACAAG 58.333 52.381 6.17 0.00 0.00 3.16
2440 2950 1.269831 ACCTCTGAGACGAACACAAGC 60.270 52.381 6.17 0.00 0.00 4.01
2441 2951 1.056103 CTCTGAGACGAACACAAGCG 58.944 55.000 0.00 0.00 0.00 4.68
2442 2952 0.384309 TCTGAGACGAACACAAGCGT 59.616 50.000 0.00 0.00 44.33 5.07
2445 2955 3.912157 GACGAACACAAGCGTCGA 58.088 55.556 0.00 0.00 45.81 4.20
2446 2956 1.767388 GACGAACACAAGCGTCGAG 59.233 57.895 0.00 0.00 45.81 4.04
2447 2957 2.199467 GACGAACACAAGCGTCGAGC 62.199 60.000 0.00 0.00 45.81 5.03
2464 2974 4.988598 CGGGCTCGTTGCAGGTGT 62.989 66.667 0.00 0.00 45.15 4.16
2465 2975 3.357079 GGGCTCGTTGCAGGTGTG 61.357 66.667 5.65 0.00 45.15 3.82
2474 2984 4.012895 GCAGGTGTGCCGACAACG 62.013 66.667 0.00 0.00 45.31 4.10
2475 2985 2.587753 CAGGTGTGCCGACAACGT 60.588 61.111 0.00 0.00 45.31 3.99
2476 2986 2.587753 AGGTGTGCCGACAACGTG 60.588 61.111 0.00 0.00 45.31 4.49
2477 2987 3.645975 GGTGTGCCGACAACGTGG 61.646 66.667 0.00 0.00 37.88 4.94
2478 2988 2.893404 GTGTGCCGACAACGTGGT 60.893 61.111 0.00 0.00 37.88 4.16
2479 2989 2.125065 TGTGCCGACAACGTGGTT 60.125 55.556 0.00 0.00 37.88 3.67
2480 2990 1.745864 TGTGCCGACAACGTGGTTT 60.746 52.632 0.00 0.00 37.88 3.27
2481 2991 1.306642 TGTGCCGACAACGTGGTTTT 61.307 50.000 0.00 0.00 37.88 2.43
2482 2992 0.179158 GTGCCGACAACGTGGTTTTT 60.179 50.000 0.00 0.00 37.88 1.94
2483 2993 0.099082 TGCCGACAACGTGGTTTTTC 59.901 50.000 0.00 0.00 37.88 2.29
2484 2994 0.379316 GCCGACAACGTGGTTTTTCT 59.621 50.000 0.00 0.00 37.88 2.52
2485 2995 1.202211 GCCGACAACGTGGTTTTTCTT 60.202 47.619 0.00 0.00 37.88 2.52
2486 2996 2.711885 CCGACAACGTGGTTTTTCTTC 58.288 47.619 0.00 0.00 37.88 2.87
2487 2997 2.540157 CCGACAACGTGGTTTTTCTTCC 60.540 50.000 0.00 0.00 37.88 3.46
2488 2998 2.711885 GACAACGTGGTTTTTCTTCCG 58.288 47.619 0.00 0.00 0.00 4.30
2489 2999 1.402613 ACAACGTGGTTTTTCTTCCGG 59.597 47.619 0.00 0.00 0.00 5.14
2490 3000 1.026584 AACGTGGTTTTTCTTCCGGG 58.973 50.000 0.00 0.00 0.00 5.73
2491 3001 0.180878 ACGTGGTTTTTCTTCCGGGA 59.819 50.000 0.00 0.00 0.00 5.14
2492 3002 0.589708 CGTGGTTTTTCTTCCGGGAC 59.410 55.000 0.00 0.00 0.00 4.46
2516 3026 3.093566 CGCTGCTACCGCTGTATAG 57.906 57.895 0.00 0.00 37.41 1.31
2517 3027 0.387367 CGCTGCTACCGCTGTATAGG 60.387 60.000 0.00 0.00 37.41 2.57
2518 3028 0.959553 GCTGCTACCGCTGTATAGGA 59.040 55.000 0.00 0.00 37.41 2.94
2519 3029 1.068194 GCTGCTACCGCTGTATAGGAG 60.068 57.143 0.00 0.00 39.24 3.69
2520 3030 0.959553 TGCTACCGCTGTATAGGAGC 59.040 55.000 0.00 0.00 36.97 4.70
2521 3031 0.244178 GCTACCGCTGTATAGGAGCC 59.756 60.000 0.00 0.00 32.41 4.70
2522 3032 0.522180 CTACCGCTGTATAGGAGCCG 59.478 60.000 0.00 0.00 32.41 5.52
2523 3033 0.892358 TACCGCTGTATAGGAGCCGG 60.892 60.000 0.00 0.00 36.67 6.13
2524 3034 1.901948 CCGCTGTATAGGAGCCGGA 60.902 63.158 5.05 0.00 34.20 5.14
2525 3035 1.286260 CGCTGTATAGGAGCCGGAC 59.714 63.158 5.05 0.00 32.41 4.79
2526 3036 1.452953 CGCTGTATAGGAGCCGGACA 61.453 60.000 5.05 0.00 32.41 4.02
2527 3037 0.969894 GCTGTATAGGAGCCGGACAT 59.030 55.000 5.05 0.00 0.00 3.06
2528 3038 1.067495 GCTGTATAGGAGCCGGACATC 60.067 57.143 5.05 0.00 0.00 3.06
2529 3039 2.520069 CTGTATAGGAGCCGGACATCT 58.480 52.381 5.05 0.00 0.00 2.90
2530 3040 2.230025 CTGTATAGGAGCCGGACATCTG 59.770 54.545 5.05 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.068541 CGAATCTATCGCCGTGGATCA 60.069 52.381 0.00 0.00 45.89 2.92
60 63 9.203163 GTATGAACTACCCCTATGCTTATCTAT 57.797 37.037 0.00 0.00 0.00 1.98
147 254 2.020460 CCCCAATCCCCCAATCCCT 61.020 63.158 0.00 0.00 0.00 4.20
161 284 1.677942 GTTTTCGTTGTGTACCCCCA 58.322 50.000 0.00 0.00 0.00 4.96
234 405 4.156739 GGCGATGAAGAAGAAAATGAAGGT 59.843 41.667 0.00 0.00 0.00 3.50
242 413 0.796312 GCACGGCGATGAAGAAGAAA 59.204 50.000 16.62 0.00 0.00 2.52
369 545 1.003573 CTGGGGAGCCTAAGGAGGT 59.996 63.158 0.00 0.00 45.78 3.85
455 631 3.173965 AGTGGTGCAAGTACAGACCTAT 58.826 45.455 0.00 0.00 0.00 2.57
506 683 1.076485 GCTGGGCCATGAATCAGGT 60.076 57.895 6.72 0.00 0.00 4.00
540 717 1.375396 CCAACGAAGGGTGCGATGA 60.375 57.895 0.00 0.00 34.07 2.92
601 778 3.254166 AGAACGAATCAAATGCAGTGCTT 59.746 39.130 17.60 7.26 0.00 3.91
807 984 2.023695 CACTACTTACCCACCCCCTCTA 60.024 54.545 0.00 0.00 0.00 2.43
862 1048 3.020984 CTGTCACTCTTCTCCTCCTACC 58.979 54.545 0.00 0.00 0.00 3.18
863 1049 3.692593 GACTGTCACTCTTCTCCTCCTAC 59.307 52.174 2.24 0.00 0.00 3.18
864 1050 3.330998 TGACTGTCACTCTTCTCCTCCTA 59.669 47.826 6.36 0.00 0.00 2.94
916 1105 4.397417 GCTAATTGAAGAGCAGTTCATGGT 59.603 41.667 1.95 0.00 44.02 3.55
1059 1249 0.893447 GTAGCACAACCTCGTAGGGT 59.107 55.000 5.98 0.00 40.58 4.34
1063 1253 1.213537 GCGGTAGCACAACCTCGTA 59.786 57.895 0.00 0.00 44.35 3.43
1092 1282 0.605589 CAGGCGTCTTCTGGTCTTCT 59.394 55.000 0.00 0.00 0.00 2.85
1100 1290 2.286523 CCACCCTCAGGCGTCTTCT 61.287 63.158 0.00 0.00 36.11 2.85
1148 1343 1.535028 CATAGTTGCGGTGCTTGTTGA 59.465 47.619 0.00 0.00 0.00 3.18
1192 1682 2.170397 TGACCTTGCAGAAGTGAGTTGA 59.830 45.455 0.00 0.00 0.00 3.18
1216 1707 2.396160 CACTCAAGCTTCAGTGCAAC 57.604 50.000 17.93 0.00 33.96 4.17
1223 1714 0.322816 GGGGATGCACTCAAGCTTCA 60.323 55.000 0.00 0.00 39.62 3.02
1263 1754 2.177580 CGGCACCACGACAAAGTGT 61.178 57.895 0.00 0.00 40.33 3.55
1313 1804 1.343069 GACTGTCACCTTCCAGGAGT 58.657 55.000 2.24 0.00 37.67 3.85
1329 1820 0.035317 TGCCGTTCATCAGCTTGACT 59.965 50.000 0.00 0.00 0.00 3.41
1482 1973 1.166531 GCTTCCCGCACTTGTTGACT 61.167 55.000 0.00 0.00 38.92 3.41
1519 2010 2.687566 CCGGCCCTACTCCTTGGT 60.688 66.667 0.00 0.00 0.00 3.67
1699 2208 3.071892 CCTGGTGTGTGGTAACCTCTTTA 59.928 47.826 0.00 0.00 37.36 1.85
1746 2255 4.442192 GCATGTTAGTGGACAAACCCAAAA 60.442 41.667 0.00 0.00 38.06 2.44
1811 2321 2.375174 TGGTTGCCTACATGACCTCTTT 59.625 45.455 0.00 0.00 33.33 2.52
1818 2328 3.291584 TGTTGTTTGGTTGCCTACATGA 58.708 40.909 0.00 0.00 0.00 3.07
1823 2333 2.034878 TGCATGTTGTTTGGTTGCCTA 58.965 42.857 0.00 0.00 32.39 3.93
1878 2388 7.921214 CGTATTACATACACTTCTCCACTCAAT 59.079 37.037 0.00 0.00 35.48 2.57
1902 2412 1.369091 CCGTACGCTACAGTACCCGT 61.369 60.000 10.49 6.73 42.84 5.28
1917 2427 2.544698 GGCGTGTTTGGTTGCCGTA 61.545 57.895 0.00 0.00 37.81 4.02
1993 2503 2.755952 ACTGCCTCCCTTCTGTTTTT 57.244 45.000 0.00 0.00 0.00 1.94
1994 2504 2.553247 GCTACTGCCTCCCTTCTGTTTT 60.553 50.000 0.00 0.00 0.00 2.43
1995 2505 1.003696 GCTACTGCCTCCCTTCTGTTT 59.996 52.381 0.00 0.00 0.00 2.83
1996 2506 0.615850 GCTACTGCCTCCCTTCTGTT 59.384 55.000 0.00 0.00 0.00 3.16
1997 2507 0.252467 AGCTACTGCCTCCCTTCTGT 60.252 55.000 0.00 0.00 40.80 3.41
1998 2508 0.177604 CAGCTACTGCCTCCCTTCTG 59.822 60.000 0.00 0.00 40.80 3.02
1999 2509 2.601664 CAGCTACTGCCTCCCTTCT 58.398 57.895 0.00 0.00 40.80 2.85
2009 2519 2.103042 GGCGTCTTGGCAGCTACTG 61.103 63.158 0.00 0.00 44.08 2.74
2010 2520 2.266055 GGCGTCTTGGCAGCTACT 59.734 61.111 0.00 0.00 44.08 2.57
2017 2527 1.282875 GAACTTGTGGCGTCTTGGC 59.717 57.895 0.00 0.00 45.12 4.52
2018 2528 0.817634 TGGAACTTGTGGCGTCTTGG 60.818 55.000 0.00 0.00 0.00 3.61
2019 2529 0.307760 GTGGAACTTGTGGCGTCTTG 59.692 55.000 0.00 0.00 0.00 3.02
2020 2530 2.702847 GTGGAACTTGTGGCGTCTT 58.297 52.632 0.00 0.00 0.00 3.01
2021 2531 4.456806 GTGGAACTTGTGGCGTCT 57.543 55.556 0.00 0.00 0.00 4.18
2032 2542 2.685100 CCCAACGTAGAGAAGTGGAAC 58.315 52.381 1.72 0.00 0.00 3.62
2033 2543 1.001633 GCCCAACGTAGAGAAGTGGAA 59.998 52.381 1.72 0.00 0.00 3.53
2034 2544 0.606604 GCCCAACGTAGAGAAGTGGA 59.393 55.000 1.72 0.00 0.00 4.02
2035 2545 0.736325 CGCCCAACGTAGAGAAGTGG 60.736 60.000 0.00 0.00 36.87 4.00
2036 2546 1.352156 GCGCCCAACGTAGAGAAGTG 61.352 60.000 0.00 0.00 46.11 3.16
2037 2547 1.080025 GCGCCCAACGTAGAGAAGT 60.080 57.895 0.00 0.00 46.11 3.01
2038 2548 0.454600 TAGCGCCCAACGTAGAGAAG 59.545 55.000 2.29 0.00 46.11 2.85
2039 2549 0.171903 GTAGCGCCCAACGTAGAGAA 59.828 55.000 2.29 0.00 46.11 2.87
2040 2550 0.679002 AGTAGCGCCCAACGTAGAGA 60.679 55.000 2.29 0.00 46.11 3.10
2041 2551 0.525668 CAGTAGCGCCCAACGTAGAG 60.526 60.000 2.29 0.00 46.11 2.43
2042 2552 1.509463 CAGTAGCGCCCAACGTAGA 59.491 57.895 2.29 0.00 46.11 2.59
2043 2553 2.165301 GCAGTAGCGCCCAACGTAG 61.165 63.158 2.29 0.00 46.11 3.51
2044 2554 2.125832 GCAGTAGCGCCCAACGTA 60.126 61.111 2.29 0.00 46.11 3.57
2045 2555 4.308458 TGCAGTAGCGCCCAACGT 62.308 61.111 2.29 0.00 46.23 3.99
2046 2556 3.788766 GTGCAGTAGCGCCCAACG 61.789 66.667 2.29 0.00 45.39 4.10
2053 2563 1.717937 GCAATCCAGTGCAGTAGCG 59.282 57.895 0.00 0.00 46.23 4.26
2054 2564 1.021390 ACGCAATCCAGTGCAGTAGC 61.021 55.000 0.00 0.00 45.19 3.58
2055 2565 1.927174 GTACGCAATCCAGTGCAGTAG 59.073 52.381 0.00 0.00 45.19 2.57
2056 2566 1.273886 TGTACGCAATCCAGTGCAGTA 59.726 47.619 0.00 0.61 45.19 2.74
2057 2567 0.034756 TGTACGCAATCCAGTGCAGT 59.965 50.000 0.00 0.00 45.19 4.40
2058 2568 0.723414 CTGTACGCAATCCAGTGCAG 59.277 55.000 0.00 0.00 45.19 4.41
2059 2569 1.298157 GCTGTACGCAATCCAGTGCA 61.298 55.000 0.00 0.00 45.19 4.57
2060 2570 1.021390 AGCTGTACGCAATCCAGTGC 61.021 55.000 11.30 0.00 42.61 4.40
2061 2571 1.002366 GAGCTGTACGCAATCCAGTG 58.998 55.000 11.30 0.00 42.61 3.66
2062 2572 0.458543 CGAGCTGTACGCAATCCAGT 60.459 55.000 11.30 0.00 42.61 4.00
2063 2573 0.179137 TCGAGCTGTACGCAATCCAG 60.179 55.000 11.30 0.00 42.61 3.86
2064 2574 0.459899 ATCGAGCTGTACGCAATCCA 59.540 50.000 11.30 0.00 42.61 3.41
2065 2575 1.132588 GATCGAGCTGTACGCAATCC 58.867 55.000 11.30 0.00 42.61 3.01
2066 2576 0.772926 CGATCGAGCTGTACGCAATC 59.227 55.000 10.26 9.57 42.61 2.67
2067 2577 0.100682 ACGATCGAGCTGTACGCAAT 59.899 50.000 24.34 0.00 42.61 3.56
2068 2578 0.522705 GACGATCGAGCTGTACGCAA 60.523 55.000 24.34 0.00 42.61 4.85
2069 2579 1.062047 GACGATCGAGCTGTACGCA 59.938 57.895 24.34 0.00 42.61 5.24
2070 2580 1.999289 CGACGATCGAGCTGTACGC 60.999 63.158 24.34 2.08 43.74 4.42
2071 2581 1.367782 CCGACGATCGAGCTGTACG 60.368 63.158 24.34 13.74 43.74 3.67
2072 2582 0.098376 AACCGACGATCGAGCTGTAC 59.902 55.000 24.34 3.12 43.74 2.90
2073 2583 0.098200 CAACCGACGATCGAGCTGTA 59.902 55.000 24.34 0.00 43.74 2.74
2074 2584 1.154016 CAACCGACGATCGAGCTGT 60.154 57.895 24.34 12.49 43.74 4.40
2075 2585 2.508891 GCAACCGACGATCGAGCTG 61.509 63.158 24.34 12.16 43.74 4.24
2076 2586 2.202623 GCAACCGACGATCGAGCT 60.203 61.111 24.34 0.00 43.74 4.09
2077 2587 3.607987 CGCAACCGACGATCGAGC 61.608 66.667 24.34 12.23 43.74 5.03
2078 2588 2.949678 CCGCAACCGACGATCGAG 60.950 66.667 24.34 14.83 43.74 4.04
2079 2589 3.740397 ACCGCAACCGACGATCGA 61.740 61.111 24.34 0.00 43.74 3.59
2080 2590 3.541831 CACCGCAACCGACGATCG 61.542 66.667 14.88 14.88 40.07 3.69
2081 2591 3.186047 CCACCGCAACCGACGATC 61.186 66.667 0.00 0.00 36.29 3.69
2098 2608 4.415332 TTCTCGGCGTGACGGAGC 62.415 66.667 11.60 0.00 43.56 4.70
2099 2609 2.504244 GTTCTCGGCGTGACGGAG 60.504 66.667 11.60 6.00 44.86 4.63
2100 2610 4.394078 CGTTCTCGGCGTGACGGA 62.394 66.667 11.60 0.00 0.00 4.69
2101 2611 2.588146 ATACGTTCTCGGCGTGACGG 62.588 60.000 25.77 17.30 42.87 4.79
2102 2612 1.192436 GATACGTTCTCGGCGTGACG 61.192 60.000 22.68 22.68 42.87 4.35
2103 2613 0.864797 GGATACGTTCTCGGCGTGAC 60.865 60.000 11.60 5.64 42.87 3.67
2104 2614 1.430632 GGATACGTTCTCGGCGTGA 59.569 57.895 6.85 7.30 42.87 4.35
2105 2615 1.588139 GGGATACGTTCTCGGCGTG 60.588 63.158 6.85 4.24 42.87 5.34
2106 2616 1.389609 ATGGGATACGTTCTCGGCGT 61.390 55.000 6.85 0.00 45.11 5.68
2107 2617 0.939577 CATGGGATACGTTCTCGGCG 60.940 60.000 0.00 0.00 41.85 6.46
2108 2618 1.222115 GCATGGGATACGTTCTCGGC 61.222 60.000 0.00 0.00 41.85 5.54
2109 2619 0.104120 TGCATGGGATACGTTCTCGG 59.896 55.000 0.00 0.00 41.85 4.63
2110 2620 1.593006 GTTGCATGGGATACGTTCTCG 59.407 52.381 0.00 0.00 43.34 4.04
2111 2621 1.593006 CGTTGCATGGGATACGTTCTC 59.407 52.381 0.00 0.00 37.60 2.87
2112 2622 1.206132 TCGTTGCATGGGATACGTTCT 59.794 47.619 6.28 0.00 35.63 3.01
2113 2623 1.647346 TCGTTGCATGGGATACGTTC 58.353 50.000 6.28 0.00 35.63 3.95
2114 2624 1.735571 GTTCGTTGCATGGGATACGTT 59.264 47.619 6.28 0.00 35.63 3.99
2115 2625 1.066430 AGTTCGTTGCATGGGATACGT 60.066 47.619 6.28 0.00 35.63 3.57
2116 2626 1.651987 AGTTCGTTGCATGGGATACG 58.348 50.000 0.00 0.00 35.46 3.06
2117 2627 4.084537 CGATTAGTTCGTTGCATGGGATAC 60.085 45.833 0.00 0.00 43.01 2.24
2118 2628 4.055360 CGATTAGTTCGTTGCATGGGATA 58.945 43.478 0.00 0.00 43.01 2.59
2119 2629 2.872245 CGATTAGTTCGTTGCATGGGAT 59.128 45.455 0.00 0.00 43.01 3.85
2120 2630 2.276201 CGATTAGTTCGTTGCATGGGA 58.724 47.619 0.00 0.00 43.01 4.37
2121 2631 1.330521 CCGATTAGTTCGTTGCATGGG 59.669 52.381 0.00 0.00 46.65 4.00
2122 2632 2.006888 ACCGATTAGTTCGTTGCATGG 58.993 47.619 0.00 0.00 46.65 3.66
2123 2633 3.038352 CACCGATTAGTTCGTTGCATG 57.962 47.619 0.00 0.00 46.65 4.06
2127 2637 1.127951 GGTGCACCGATTAGTTCGTTG 59.872 52.381 22.49 0.00 46.65 4.10
2128 2638 1.270412 TGGTGCACCGATTAGTTCGTT 60.270 47.619 30.07 0.00 46.65 3.85
2129 2639 0.319083 TGGTGCACCGATTAGTTCGT 59.681 50.000 30.07 0.00 46.65 3.85
2131 2641 2.380084 TCTGGTGCACCGATTAGTTC 57.620 50.000 30.07 4.16 39.43 3.01
2132 2642 2.632377 CATCTGGTGCACCGATTAGTT 58.368 47.619 28.89 16.23 39.43 2.24
2133 2643 2.315925 CATCTGGTGCACCGATTAGT 57.684 50.000 28.89 14.74 39.43 2.24
2144 2654 1.812922 GTCGCTGGAGCATCTGGTG 60.813 63.158 0.00 0.00 42.21 4.17
2145 2655 1.548357 AAGTCGCTGGAGCATCTGGT 61.548 55.000 0.00 0.00 42.21 4.00
2146 2656 0.809241 GAAGTCGCTGGAGCATCTGG 60.809 60.000 0.00 0.00 42.21 3.86
2147 2657 0.175302 AGAAGTCGCTGGAGCATCTG 59.825 55.000 0.00 0.00 42.21 2.90
2148 2658 0.175302 CAGAAGTCGCTGGAGCATCT 59.825 55.000 0.00 0.00 42.21 2.90
2149 2659 2.675519 CAGAAGTCGCTGGAGCATC 58.324 57.895 0.00 0.00 42.21 3.91
2150 2660 4.928398 CAGAAGTCGCTGGAGCAT 57.072 55.556 0.00 0.00 42.21 3.79
2160 2670 4.158025 TCTCAATCTAACGGACCAGAAGTC 59.842 45.833 0.00 0.00 45.51 3.01
2161 2671 4.087182 TCTCAATCTAACGGACCAGAAGT 58.913 43.478 0.00 0.00 0.00 3.01
2162 2672 4.720649 TCTCAATCTAACGGACCAGAAG 57.279 45.455 0.00 0.00 0.00 2.85
2163 2673 5.186992 TCATTCTCAATCTAACGGACCAGAA 59.813 40.000 0.00 0.00 0.00 3.02
2164 2674 4.709886 TCATTCTCAATCTAACGGACCAGA 59.290 41.667 0.00 0.00 0.00 3.86
2165 2675 5.011090 TCATTCTCAATCTAACGGACCAG 57.989 43.478 0.00 0.00 0.00 4.00
2166 2676 5.414789 TTCATTCTCAATCTAACGGACCA 57.585 39.130 0.00 0.00 0.00 4.02
2167 2677 4.811557 CCTTCATTCTCAATCTAACGGACC 59.188 45.833 0.00 0.00 0.00 4.46
2168 2678 4.811557 CCCTTCATTCTCAATCTAACGGAC 59.188 45.833 0.00 0.00 0.00 4.79
2169 2679 4.714802 TCCCTTCATTCTCAATCTAACGGA 59.285 41.667 0.00 0.00 0.00 4.69
2170 2680 4.811557 GTCCCTTCATTCTCAATCTAACGG 59.188 45.833 0.00 0.00 0.00 4.44
2171 2681 5.419542 TGTCCCTTCATTCTCAATCTAACG 58.580 41.667 0.00 0.00 0.00 3.18
2172 2682 7.106239 TCTTGTCCCTTCATTCTCAATCTAAC 58.894 38.462 0.00 0.00 0.00 2.34
2173 2683 7.257790 TCTTGTCCCTTCATTCTCAATCTAA 57.742 36.000 0.00 0.00 0.00 2.10
2174 2684 6.874278 TCTTGTCCCTTCATTCTCAATCTA 57.126 37.500 0.00 0.00 0.00 1.98
2175 2685 5.768980 TCTTGTCCCTTCATTCTCAATCT 57.231 39.130 0.00 0.00 0.00 2.40
2176 2686 6.355747 AGATCTTGTCCCTTCATTCTCAATC 58.644 40.000 0.00 0.00 0.00 2.67
2177 2687 6.324601 AGATCTTGTCCCTTCATTCTCAAT 57.675 37.500 0.00 0.00 0.00 2.57
2178 2688 5.768980 AGATCTTGTCCCTTCATTCTCAA 57.231 39.130 0.00 0.00 0.00 3.02
2179 2689 5.365025 CCTAGATCTTGTCCCTTCATTCTCA 59.635 44.000 0.00 0.00 0.00 3.27
2180 2690 5.741673 GCCTAGATCTTGTCCCTTCATTCTC 60.742 48.000 0.00 0.00 0.00 2.87
2181 2691 4.102367 GCCTAGATCTTGTCCCTTCATTCT 59.898 45.833 0.00 0.00 0.00 2.40
2182 2692 4.141620 TGCCTAGATCTTGTCCCTTCATTC 60.142 45.833 0.00 0.00 0.00 2.67
2183 2693 3.782523 TGCCTAGATCTTGTCCCTTCATT 59.217 43.478 0.00 0.00 0.00 2.57
2184 2694 3.135530 GTGCCTAGATCTTGTCCCTTCAT 59.864 47.826 0.00 0.00 0.00 2.57
2185 2695 2.501723 GTGCCTAGATCTTGTCCCTTCA 59.498 50.000 0.00 0.00 0.00 3.02
2186 2696 2.501723 TGTGCCTAGATCTTGTCCCTTC 59.498 50.000 0.00 0.00 0.00 3.46
2187 2697 2.551270 TGTGCCTAGATCTTGTCCCTT 58.449 47.619 0.00 0.00 0.00 3.95
2188 2698 2.254152 TGTGCCTAGATCTTGTCCCT 57.746 50.000 0.00 0.00 0.00 4.20
2189 2699 2.171448 ACATGTGCCTAGATCTTGTCCC 59.829 50.000 0.00 0.00 0.00 4.46
2190 2700 3.550437 ACATGTGCCTAGATCTTGTCC 57.450 47.619 0.00 0.00 0.00 4.02
2191 2701 3.624861 CCAACATGTGCCTAGATCTTGTC 59.375 47.826 0.00 0.00 0.00 3.18
2192 2702 3.614092 CCAACATGTGCCTAGATCTTGT 58.386 45.455 0.00 0.00 0.00 3.16
2193 2703 2.947652 CCCAACATGTGCCTAGATCTTG 59.052 50.000 0.00 0.00 0.00 3.02
2194 2704 2.578021 ACCCAACATGTGCCTAGATCTT 59.422 45.455 0.00 0.00 0.00 2.40
2195 2705 2.200081 ACCCAACATGTGCCTAGATCT 58.800 47.619 0.00 0.00 0.00 2.75
2196 2706 2.684881 CAACCCAACATGTGCCTAGATC 59.315 50.000 0.00 0.00 0.00 2.75
2197 2707 2.726821 CAACCCAACATGTGCCTAGAT 58.273 47.619 0.00 0.00 0.00 1.98
2198 2708 1.886222 GCAACCCAACATGTGCCTAGA 60.886 52.381 0.00 0.00 0.00 2.43
2199 2709 0.527565 GCAACCCAACATGTGCCTAG 59.472 55.000 0.00 0.00 0.00 3.02
2200 2710 0.112218 AGCAACCCAACATGTGCCTA 59.888 50.000 0.00 0.00 0.00 3.93
2201 2711 1.152483 AGCAACCCAACATGTGCCT 60.152 52.632 0.00 0.00 0.00 4.75
2202 2712 1.005867 CAGCAACCCAACATGTGCC 60.006 57.895 0.00 0.00 0.00 5.01
2203 2713 1.005867 CCAGCAACCCAACATGTGC 60.006 57.895 0.00 0.00 0.00 4.57
2204 2714 1.005867 GCCAGCAACCCAACATGTG 60.006 57.895 0.00 0.00 0.00 3.21
2205 2715 1.457267 TGCCAGCAACCCAACATGT 60.457 52.632 0.00 0.00 0.00 3.21
2206 2716 1.005867 GTGCCAGCAACCCAACATG 60.006 57.895 0.00 0.00 0.00 3.21
2207 2717 1.152483 AGTGCCAGCAACCCAACAT 60.152 52.632 0.00 0.00 0.00 2.71
2208 2718 1.827789 GAGTGCCAGCAACCCAACA 60.828 57.895 0.00 0.00 0.00 3.33
2209 2719 1.109323 AAGAGTGCCAGCAACCCAAC 61.109 55.000 0.00 0.00 0.00 3.77
2210 2720 1.108727 CAAGAGTGCCAGCAACCCAA 61.109 55.000 0.00 0.00 0.00 4.12
2211 2721 1.529010 CAAGAGTGCCAGCAACCCA 60.529 57.895 0.00 0.00 0.00 4.51
2212 2722 2.924105 GCAAGAGTGCCAGCAACCC 61.924 63.158 0.00 0.00 45.68 4.11
2213 2723 2.647297 GCAAGAGTGCCAGCAACC 59.353 61.111 0.00 0.00 45.68 3.77
2225 2735 4.574674 ACATAAGGTCCATTCTGCAAGA 57.425 40.909 0.00 0.00 44.68 3.02
2226 2736 4.946157 AGAACATAAGGTCCATTCTGCAAG 59.054 41.667 0.00 0.00 0.00 4.01
2227 2737 4.922206 AGAACATAAGGTCCATTCTGCAA 58.078 39.130 0.00 0.00 0.00 4.08
2228 2738 4.225942 AGAGAACATAAGGTCCATTCTGCA 59.774 41.667 0.00 0.00 29.85 4.41
2229 2739 4.775236 AGAGAACATAAGGTCCATTCTGC 58.225 43.478 0.00 0.00 29.85 4.26
2230 2740 6.232581 AGAGAGAACATAAGGTCCATTCTG 57.767 41.667 0.00 0.00 29.85 3.02
2231 2741 7.979786 TTAGAGAGAACATAAGGTCCATTCT 57.020 36.000 0.00 0.00 32.36 2.40
2232 2742 9.050601 CAATTAGAGAGAACATAAGGTCCATTC 57.949 37.037 0.00 0.00 0.00 2.67
2233 2743 8.772250 TCAATTAGAGAGAACATAAGGTCCATT 58.228 33.333 0.00 0.00 0.00 3.16
2234 2744 8.324191 TCAATTAGAGAGAACATAAGGTCCAT 57.676 34.615 0.00 0.00 0.00 3.41
2235 2745 7.733773 TCAATTAGAGAGAACATAAGGTCCA 57.266 36.000 0.00 0.00 0.00 4.02
2236 2746 7.222999 CGTTCAATTAGAGAGAACATAAGGTCC 59.777 40.741 0.00 0.00 41.17 4.46
2237 2747 7.974501 TCGTTCAATTAGAGAGAACATAAGGTC 59.025 37.037 0.00 0.00 41.17 3.85
2238 2748 7.837863 TCGTTCAATTAGAGAGAACATAAGGT 58.162 34.615 0.00 0.00 41.17 3.50
2239 2749 8.596380 GTTCGTTCAATTAGAGAGAACATAAGG 58.404 37.037 0.00 0.00 41.17 2.69
2240 2750 9.360093 AGTTCGTTCAATTAGAGAGAACATAAG 57.640 33.333 18.02 3.32 42.14 1.73
2241 2751 9.140286 CAGTTCGTTCAATTAGAGAGAACATAA 57.860 33.333 18.02 7.58 42.14 1.90
2242 2752 8.520351 TCAGTTCGTTCAATTAGAGAGAACATA 58.480 33.333 18.02 10.22 42.14 2.29
2243 2753 7.378966 TCAGTTCGTTCAATTAGAGAGAACAT 58.621 34.615 18.02 9.20 42.14 2.71
2244 2754 6.745116 TCAGTTCGTTCAATTAGAGAGAACA 58.255 36.000 18.02 3.89 42.14 3.18
2245 2755 6.183360 GCTCAGTTCGTTCAATTAGAGAGAAC 60.183 42.308 0.00 0.00 41.08 3.01
2246 2756 5.864474 GCTCAGTTCGTTCAATTAGAGAGAA 59.136 40.000 0.00 0.00 0.00 2.87
2247 2757 5.048013 TGCTCAGTTCGTTCAATTAGAGAGA 60.048 40.000 0.00 0.00 0.00 3.10
2248 2758 5.164233 TGCTCAGTTCGTTCAATTAGAGAG 58.836 41.667 0.00 0.00 0.00 3.20
2249 2759 5.134202 TGCTCAGTTCGTTCAATTAGAGA 57.866 39.130 0.00 0.00 0.00 3.10
2250 2760 5.349817 ACATGCTCAGTTCGTTCAATTAGAG 59.650 40.000 0.00 0.00 0.00 2.43
2251 2761 5.237815 ACATGCTCAGTTCGTTCAATTAGA 58.762 37.500 0.00 0.00 0.00 2.10
2252 2762 5.349817 AGACATGCTCAGTTCGTTCAATTAG 59.650 40.000 0.00 0.00 0.00 1.73
2253 2763 5.237815 AGACATGCTCAGTTCGTTCAATTA 58.762 37.500 0.00 0.00 0.00 1.40
2254 2764 4.067896 AGACATGCTCAGTTCGTTCAATT 58.932 39.130 0.00 0.00 0.00 2.32
2255 2765 3.668447 AGACATGCTCAGTTCGTTCAAT 58.332 40.909 0.00 0.00 0.00 2.57
2256 2766 3.059884 GAGACATGCTCAGTTCGTTCAA 58.940 45.455 10.95 0.00 43.38 2.69
2257 2767 2.297315 AGAGACATGCTCAGTTCGTTCA 59.703 45.455 16.20 0.00 46.45 3.18
2258 2768 2.920490 GAGAGACATGCTCAGTTCGTTC 59.080 50.000 16.20 3.48 46.45 3.95
2259 2769 2.560542 AGAGAGACATGCTCAGTTCGTT 59.439 45.455 16.20 0.00 46.45 3.85
2260 2770 2.166829 AGAGAGACATGCTCAGTTCGT 58.833 47.619 16.20 0.00 46.45 3.85
2261 2771 2.937469 AGAGAGACATGCTCAGTTCG 57.063 50.000 16.20 0.00 46.45 3.95
2262 2772 3.195396 AGGAAGAGAGACATGCTCAGTTC 59.805 47.826 16.20 15.75 46.45 3.01
2263 2773 3.172339 AGGAAGAGAGACATGCTCAGTT 58.828 45.455 16.20 10.18 46.45 3.16
2264 2774 2.760092 GAGGAAGAGAGACATGCTCAGT 59.240 50.000 16.20 3.71 46.45 3.41
2265 2775 2.223548 CGAGGAAGAGAGACATGCTCAG 60.224 54.545 16.20 0.00 46.45 3.35
2266 2776 1.747924 CGAGGAAGAGAGACATGCTCA 59.252 52.381 16.20 0.00 46.45 4.26
2267 2777 1.535860 GCGAGGAAGAGAGACATGCTC 60.536 57.143 8.56 8.56 44.29 4.26
2268 2778 0.459489 GCGAGGAAGAGAGACATGCT 59.541 55.000 0.00 0.00 0.00 3.79
2269 2779 0.459489 AGCGAGGAAGAGAGACATGC 59.541 55.000 0.00 0.00 0.00 4.06
2270 2780 2.426738 AGAAGCGAGGAAGAGAGACATG 59.573 50.000 0.00 0.00 0.00 3.21
2271 2781 2.687935 GAGAAGCGAGGAAGAGAGACAT 59.312 50.000 0.00 0.00 0.00 3.06
2272 2782 2.088423 GAGAAGCGAGGAAGAGAGACA 58.912 52.381 0.00 0.00 0.00 3.41
2273 2783 2.365582 AGAGAAGCGAGGAAGAGAGAC 58.634 52.381 0.00 0.00 0.00 3.36
2274 2784 2.752354 CAAGAGAAGCGAGGAAGAGAGA 59.248 50.000 0.00 0.00 0.00 3.10
2275 2785 2.491693 ACAAGAGAAGCGAGGAAGAGAG 59.508 50.000 0.00 0.00 0.00 3.20
2276 2786 2.520069 ACAAGAGAAGCGAGGAAGAGA 58.480 47.619 0.00 0.00 0.00 3.10
2277 2787 3.442273 AGTACAAGAGAAGCGAGGAAGAG 59.558 47.826 0.00 0.00 0.00 2.85
2278 2788 3.422796 AGTACAAGAGAAGCGAGGAAGA 58.577 45.455 0.00 0.00 0.00 2.87
2279 2789 3.859411 AGTACAAGAGAAGCGAGGAAG 57.141 47.619 0.00 0.00 0.00 3.46
2280 2790 4.307432 CAAAGTACAAGAGAAGCGAGGAA 58.693 43.478 0.00 0.00 0.00 3.36
2281 2791 3.306088 CCAAAGTACAAGAGAAGCGAGGA 60.306 47.826 0.00 0.00 0.00 3.71
2282 2792 2.996621 CCAAAGTACAAGAGAAGCGAGG 59.003 50.000 0.00 0.00 0.00 4.63
2283 2793 2.996621 CCCAAAGTACAAGAGAAGCGAG 59.003 50.000 0.00 0.00 0.00 5.03
2284 2794 2.631062 TCCCAAAGTACAAGAGAAGCGA 59.369 45.455 0.00 0.00 0.00 4.93
2285 2795 2.996621 CTCCCAAAGTACAAGAGAAGCG 59.003 50.000 0.00 0.00 0.00 4.68
2286 2796 4.273148 TCTCCCAAAGTACAAGAGAAGC 57.727 45.455 0.00 0.00 30.88 3.86
2287 2797 5.046304 TCCATCTCCCAAAGTACAAGAGAAG 60.046 44.000 0.00 0.00 37.16 2.85
2288 2798 4.844085 TCCATCTCCCAAAGTACAAGAGAA 59.156 41.667 0.00 0.00 37.16 2.87
2289 2799 4.425772 TCCATCTCCCAAAGTACAAGAGA 58.574 43.478 0.00 0.00 37.94 3.10
2290 2800 4.826274 TCCATCTCCCAAAGTACAAGAG 57.174 45.455 0.00 0.00 0.00 2.85
2291 2801 5.779241 AATCCATCTCCCAAAGTACAAGA 57.221 39.130 0.00 0.00 0.00 3.02
2292 2802 5.823045 GGTAATCCATCTCCCAAAGTACAAG 59.177 44.000 0.00 0.00 0.00 3.16
2293 2803 5.251932 TGGTAATCCATCTCCCAAAGTACAA 59.748 40.000 0.00 0.00 39.03 2.41
2294 2804 4.785914 TGGTAATCCATCTCCCAAAGTACA 59.214 41.667 0.00 0.00 39.03 2.90
2295 2805 5.367945 TGGTAATCCATCTCCCAAAGTAC 57.632 43.478 0.00 0.00 39.03 2.73
2296 2806 6.395780 TTTGGTAATCCATCTCCCAAAGTA 57.604 37.500 0.00 0.00 43.91 2.24
2297 2807 4.946160 TTGGTAATCCATCTCCCAAAGT 57.054 40.909 0.00 0.00 43.91 2.66
2298 2808 6.796785 AATTTGGTAATCCATCTCCCAAAG 57.203 37.500 8.01 0.00 45.41 2.77
2299 2809 6.728164 TGAAATTTGGTAATCCATCTCCCAAA 59.272 34.615 0.00 4.79 46.04 3.28
2300 2810 6.259893 TGAAATTTGGTAATCCATCTCCCAA 58.740 36.000 0.00 0.00 43.91 4.12
2301 2811 5.836705 TGAAATTTGGTAATCCATCTCCCA 58.163 37.500 0.00 0.00 43.91 4.37
2302 2812 5.221322 GCTGAAATTTGGTAATCCATCTCCC 60.221 44.000 0.00 0.00 43.91 4.30
2303 2813 5.506317 CGCTGAAATTTGGTAATCCATCTCC 60.506 44.000 0.00 0.00 43.91 3.71
2304 2814 5.514279 CGCTGAAATTTGGTAATCCATCTC 58.486 41.667 0.00 0.00 43.91 2.75
2305 2815 4.202050 GCGCTGAAATTTGGTAATCCATCT 60.202 41.667 0.00 0.00 43.91 2.90
2306 2816 4.044426 GCGCTGAAATTTGGTAATCCATC 58.956 43.478 0.00 0.00 43.91 3.51
2307 2817 3.181476 GGCGCTGAAATTTGGTAATCCAT 60.181 43.478 7.64 0.00 43.91 3.41
2308 2818 2.165437 GGCGCTGAAATTTGGTAATCCA 59.835 45.455 7.64 0.00 42.66 3.41
2309 2819 2.794631 CGGCGCTGAAATTTGGTAATCC 60.795 50.000 11.90 0.00 0.00 3.01
2310 2820 2.450160 CGGCGCTGAAATTTGGTAATC 58.550 47.619 11.90 0.00 0.00 1.75
2311 2821 1.469079 GCGGCGCTGAAATTTGGTAAT 60.469 47.619 26.86 0.00 0.00 1.89
2312 2822 0.109504 GCGGCGCTGAAATTTGGTAA 60.110 50.000 26.86 0.00 0.00 2.85
2313 2823 1.504446 GCGGCGCTGAAATTTGGTA 59.496 52.632 26.86 0.00 0.00 3.25
2314 2824 2.258286 GCGGCGCTGAAATTTGGT 59.742 55.556 26.86 0.00 0.00 3.67
2315 2825 2.506881 GGCGGCGCTGAAATTTGG 60.507 61.111 32.30 0.00 0.00 3.28
2316 2826 2.875711 CGGCGGCGCTGAAATTTG 60.876 61.111 35.79 9.00 37.02 2.32
2317 2827 3.322706 GACGGCGGCGCTGAAATTT 62.323 57.895 43.53 23.74 38.46 1.82
2318 2828 3.799755 GACGGCGGCGCTGAAATT 61.800 61.111 43.53 24.15 38.46 1.82
2319 2829 4.760047 AGACGGCGGCGCTGAAAT 62.760 61.111 43.53 24.55 38.46 2.17
2327 2837 2.508586 AAAAGAGGAGAGACGGCGGC 62.509 60.000 13.24 8.92 0.00 6.53
2328 2838 0.737715 CAAAAGAGGAGAGACGGCGG 60.738 60.000 13.24 0.00 0.00 6.13
2329 2839 0.038159 ACAAAAGAGGAGAGACGGCG 60.038 55.000 4.80 4.80 0.00 6.46
2330 2840 2.608268 GTACAAAAGAGGAGAGACGGC 58.392 52.381 0.00 0.00 0.00 5.68
2331 2841 2.561419 TGGTACAAAAGAGGAGAGACGG 59.439 50.000 0.00 0.00 31.92 4.79
2332 2842 3.576648 GTGGTACAAAAGAGGAGAGACG 58.423 50.000 0.00 0.00 44.16 4.18
2333 2843 3.579151 AGGTGGTACAAAAGAGGAGAGAC 59.421 47.826 0.00 0.00 44.16 3.36
2334 2844 3.578716 CAGGTGGTACAAAAGAGGAGAGA 59.421 47.826 0.00 0.00 44.16 3.10
2335 2845 3.578716 TCAGGTGGTACAAAAGAGGAGAG 59.421 47.826 0.00 0.00 44.16 3.20
2336 2846 3.578716 CTCAGGTGGTACAAAAGAGGAGA 59.421 47.826 0.00 0.00 44.16 3.71
2337 2847 3.866449 GCTCAGGTGGTACAAAAGAGGAG 60.866 52.174 0.00 0.00 44.16 3.69
2338 2848 2.038557 GCTCAGGTGGTACAAAAGAGGA 59.961 50.000 0.00 0.00 44.16 3.71
2339 2849 2.039084 AGCTCAGGTGGTACAAAAGAGG 59.961 50.000 0.00 0.00 44.16 3.69
2340 2850 3.330267 GAGCTCAGGTGGTACAAAAGAG 58.670 50.000 9.40 0.00 44.16 2.85
2341 2851 2.038557 GGAGCTCAGGTGGTACAAAAGA 59.961 50.000 17.19 0.00 44.16 2.52
2342 2852 2.427506 GGAGCTCAGGTGGTACAAAAG 58.572 52.381 17.19 0.00 44.16 2.27
2343 2853 1.073284 GGGAGCTCAGGTGGTACAAAA 59.927 52.381 17.19 0.00 44.16 2.44
2344 2854 0.690762 GGGAGCTCAGGTGGTACAAA 59.309 55.000 17.19 0.00 44.16 2.83
2345 2855 1.198759 GGGGAGCTCAGGTGGTACAA 61.199 60.000 17.19 0.00 44.16 2.41
2346 2856 1.612442 GGGGAGCTCAGGTGGTACA 60.612 63.158 17.19 0.00 0.00 2.90
2347 2857 1.306226 AGGGGAGCTCAGGTGGTAC 60.306 63.158 17.19 0.00 0.00 3.34
2348 2858 1.001760 GAGGGGAGCTCAGGTGGTA 59.998 63.158 17.19 0.00 0.00 3.25
2349 2859 2.284995 GAGGGGAGCTCAGGTGGT 60.285 66.667 17.19 0.00 0.00 4.16
2350 2860 3.465403 CGAGGGGAGCTCAGGTGG 61.465 72.222 17.19 0.00 0.00 4.61
2351 2861 4.154347 GCGAGGGGAGCTCAGGTG 62.154 72.222 17.19 1.90 0.00 4.00
2352 2862 4.390556 AGCGAGGGGAGCTCAGGT 62.391 66.667 17.19 3.78 41.83 4.00
2358 2868 0.316841 CAATAGAGAGCGAGGGGAGC 59.683 60.000 0.00 0.00 0.00 4.70
2359 2869 1.698506 ACAATAGAGAGCGAGGGGAG 58.301 55.000 0.00 0.00 0.00 4.30
2360 2870 2.957006 GTTACAATAGAGAGCGAGGGGA 59.043 50.000 0.00 0.00 0.00 4.81
2361 2871 2.693591 TGTTACAATAGAGAGCGAGGGG 59.306 50.000 0.00 0.00 0.00 4.79
2362 2872 4.386867 TTGTTACAATAGAGAGCGAGGG 57.613 45.455 0.00 0.00 0.00 4.30
2363 2873 5.352284 ACATTGTTACAATAGAGAGCGAGG 58.648 41.667 10.46 0.00 0.00 4.63
2364 2874 7.166638 CACTACATTGTTACAATAGAGAGCGAG 59.833 40.741 19.03 8.42 0.00 5.03
2365 2875 6.972901 CACTACATTGTTACAATAGAGAGCGA 59.027 38.462 19.03 0.00 0.00 4.93
2366 2876 6.972901 TCACTACATTGTTACAATAGAGAGCG 59.027 38.462 19.03 6.60 0.00 5.03
2367 2877 8.879342 ATCACTACATTGTTACAATAGAGAGC 57.121 34.615 19.03 0.00 0.00 4.09
2370 2880 9.469807 GGAGATCACTACATTGTTACAATAGAG 57.530 37.037 10.46 12.33 0.00 2.43
2371 2881 8.977412 TGGAGATCACTACATTGTTACAATAGA 58.023 33.333 10.46 4.89 31.17 1.98
2372 2882 9.770097 ATGGAGATCACTACATTGTTACAATAG 57.230 33.333 10.46 8.13 44.46 1.73
2373 2883 9.546428 CATGGAGATCACTACATTGTTACAATA 57.454 33.333 10.46 0.00 44.46 1.90
2374 2884 8.049117 ACATGGAGATCACTACATTGTTACAAT 58.951 33.333 4.56 4.56 44.46 2.71
2375 2885 7.394016 ACATGGAGATCACTACATTGTTACAA 58.606 34.615 0.00 0.00 44.46 2.41
2376 2886 6.946340 ACATGGAGATCACTACATTGTTACA 58.054 36.000 0.00 0.00 44.46 2.41
2377 2887 7.849804 AACATGGAGATCACTACATTGTTAC 57.150 36.000 0.00 0.00 44.46 2.50
2378 2888 8.100164 TGAAACATGGAGATCACTACATTGTTA 58.900 33.333 0.00 0.00 44.46 2.41
2379 2889 6.942005 TGAAACATGGAGATCACTACATTGTT 59.058 34.615 0.00 0.00 44.46 2.83
2380 2890 6.475504 TGAAACATGGAGATCACTACATTGT 58.524 36.000 0.00 0.00 44.46 2.71
2381 2891 6.990341 TGAAACATGGAGATCACTACATTG 57.010 37.500 0.00 0.00 44.46 2.82
2382 2892 8.585471 ATTTGAAACATGGAGATCACTACATT 57.415 30.769 0.00 0.00 44.46 2.71
2384 2894 7.665145 TGAATTTGAAACATGGAGATCACTACA 59.335 33.333 0.00 0.00 41.62 2.74
2385 2895 8.044060 TGAATTTGAAACATGGAGATCACTAC 57.956 34.615 0.00 0.00 0.00 2.73
2386 2896 8.514594 GTTGAATTTGAAACATGGAGATCACTA 58.485 33.333 0.00 0.00 0.00 2.74
2387 2897 7.014518 TGTTGAATTTGAAACATGGAGATCACT 59.985 33.333 0.00 0.00 31.52 3.41
2388 2898 7.147312 TGTTGAATTTGAAACATGGAGATCAC 58.853 34.615 0.00 0.00 31.52 3.06
2389 2899 7.287512 TGTTGAATTTGAAACATGGAGATCA 57.712 32.000 0.00 0.00 31.52 2.92
2390 2900 8.030692 TGATGTTGAATTTGAAACATGGAGATC 58.969 33.333 15.64 6.05 44.83 2.75
2391 2901 7.816031 GTGATGTTGAATTTGAAACATGGAGAT 59.184 33.333 15.64 0.00 44.83 2.75
2392 2902 7.147312 GTGATGTTGAATTTGAAACATGGAGA 58.853 34.615 15.64 0.98 44.83 3.71
2393 2903 6.366877 GGTGATGTTGAATTTGAAACATGGAG 59.633 38.462 15.64 0.00 44.83 3.86
2394 2904 6.222389 GGTGATGTTGAATTTGAAACATGGA 58.778 36.000 15.64 4.44 44.83 3.41
2395 2905 5.118971 CGGTGATGTTGAATTTGAAACATGG 59.881 40.000 15.64 4.02 44.83 3.66
2396 2906 5.919707 TCGGTGATGTTGAATTTGAAACATG 59.080 36.000 15.64 0.00 44.83 3.21
2397 2907 5.920273 GTCGGTGATGTTGAATTTGAAACAT 59.080 36.000 12.32 12.32 46.87 2.71
2398 2908 5.277825 GTCGGTGATGTTGAATTTGAAACA 58.722 37.500 5.19 5.19 40.36 2.83
2399 2909 4.679654 GGTCGGTGATGTTGAATTTGAAAC 59.320 41.667 0.00 0.00 0.00 2.78
2400 2910 4.582656 AGGTCGGTGATGTTGAATTTGAAA 59.417 37.500 0.00 0.00 0.00 2.69
2401 2911 4.141287 AGGTCGGTGATGTTGAATTTGAA 58.859 39.130 0.00 0.00 0.00 2.69
2402 2912 3.750371 AGGTCGGTGATGTTGAATTTGA 58.250 40.909 0.00 0.00 0.00 2.69
2403 2913 3.753272 AGAGGTCGGTGATGTTGAATTTG 59.247 43.478 0.00 0.00 0.00 2.32
2404 2914 3.753272 CAGAGGTCGGTGATGTTGAATTT 59.247 43.478 0.00 0.00 0.00 1.82
2405 2915 3.007940 TCAGAGGTCGGTGATGTTGAATT 59.992 43.478 0.00 0.00 0.00 2.17
2406 2916 2.567169 TCAGAGGTCGGTGATGTTGAAT 59.433 45.455 0.00 0.00 0.00 2.57
2407 2917 1.967779 TCAGAGGTCGGTGATGTTGAA 59.032 47.619 0.00 0.00 0.00 2.69
2408 2918 1.546029 CTCAGAGGTCGGTGATGTTGA 59.454 52.381 0.00 0.00 0.00 3.18
2409 2919 1.546029 TCTCAGAGGTCGGTGATGTTG 59.454 52.381 0.00 0.00 0.00 3.33
2410 2920 1.546476 GTCTCAGAGGTCGGTGATGTT 59.454 52.381 0.00 0.00 0.00 2.71
2411 2921 1.178276 GTCTCAGAGGTCGGTGATGT 58.822 55.000 0.00 0.00 0.00 3.06
2412 2922 0.099613 CGTCTCAGAGGTCGGTGATG 59.900 60.000 0.00 0.00 0.00 3.07
2413 2923 0.035343 TCGTCTCAGAGGTCGGTGAT 60.035 55.000 13.23 0.00 0.00 3.06
2414 2924 0.250597 TTCGTCTCAGAGGTCGGTGA 60.251 55.000 13.23 0.00 0.00 4.02
2415 2925 0.109689 GTTCGTCTCAGAGGTCGGTG 60.110 60.000 13.23 0.00 0.00 4.94
2416 2926 0.536687 TGTTCGTCTCAGAGGTCGGT 60.537 55.000 13.23 0.00 0.00 4.69
2417 2927 0.109689 GTGTTCGTCTCAGAGGTCGG 60.110 60.000 13.23 0.00 0.00 4.79
2418 2928 0.591659 TGTGTTCGTCTCAGAGGTCG 59.408 55.000 0.00 3.76 0.00 4.79
2419 2929 2.667137 CTTGTGTTCGTCTCAGAGGTC 58.333 52.381 0.00 0.00 0.00 3.85
2420 2930 1.269831 GCTTGTGTTCGTCTCAGAGGT 60.270 52.381 0.00 0.00 0.00 3.85
2421 2931 1.423395 GCTTGTGTTCGTCTCAGAGG 58.577 55.000 0.00 0.00 0.00 3.69
2422 2932 1.056103 CGCTTGTGTTCGTCTCAGAG 58.944 55.000 0.00 0.00 0.00 3.35
2423 2933 0.384309 ACGCTTGTGTTCGTCTCAGA 59.616 50.000 0.00 0.00 33.09 3.27
2424 2934 2.886859 ACGCTTGTGTTCGTCTCAG 58.113 52.632 0.00 0.00 33.09 3.35
2429 2939 2.300787 GCTCGACGCTTGTGTTCGT 61.301 57.895 0.00 0.00 42.09 3.85
2430 2940 2.465920 GCTCGACGCTTGTGTTCG 59.534 61.111 0.00 0.00 35.14 3.95
2431 2941 2.465920 CGCTCGACGCTTGTGTTC 59.534 61.111 5.53 0.00 36.13 3.18
2432 2942 3.036084 CCGCTCGACGCTTGTGTT 61.036 61.111 5.53 0.00 41.76 3.32
2447 2957 4.988598 ACACCTGCAACGAGCCCG 62.989 66.667 0.00 0.00 44.83 6.13
2448 2958 3.357079 CACACCTGCAACGAGCCC 61.357 66.667 0.00 0.00 44.83 5.19
2449 2959 4.030452 GCACACCTGCAACGAGCC 62.030 66.667 0.00 0.00 43.62 4.70
2450 2960 4.030452 GGCACACCTGCAACGAGC 62.030 66.667 0.00 0.00 46.28 5.03
2451 2961 3.716006 CGGCACACCTGCAACGAG 61.716 66.667 0.00 0.00 46.28 4.18
2452 2962 4.228567 TCGGCACACCTGCAACGA 62.229 61.111 0.00 0.00 46.28 3.85
2453 2963 4.012895 GTCGGCACACCTGCAACG 62.013 66.667 0.00 0.00 46.28 4.10
2454 2964 2.477176 TTGTCGGCACACCTGCAAC 61.477 57.895 0.00 0.00 46.28 4.17
2455 2965 2.124529 TTGTCGGCACACCTGCAA 60.125 55.556 0.00 0.00 46.28 4.08
2456 2966 2.899838 GTTGTCGGCACACCTGCA 60.900 61.111 0.00 0.00 46.28 4.41
2457 2967 4.012895 CGTTGTCGGCACACCTGC 62.013 66.667 0.00 0.00 43.41 4.85
2458 2968 2.587753 ACGTTGTCGGCACACCTG 60.588 61.111 0.00 0.00 41.85 4.00
2459 2969 2.587753 CACGTTGTCGGCACACCT 60.588 61.111 0.00 0.00 41.85 4.00
2460 2970 3.645975 CCACGTTGTCGGCACACC 61.646 66.667 0.00 0.00 41.85 4.16
2461 2971 1.984321 AAACCACGTTGTCGGCACAC 61.984 55.000 0.00 0.00 41.85 3.82
2462 2972 1.306642 AAAACCACGTTGTCGGCACA 61.307 50.000 0.00 0.00 41.85 4.57
2463 2973 0.179158 AAAAACCACGTTGTCGGCAC 60.179 50.000 0.00 0.00 41.85 5.01
2464 2974 0.099082 GAAAAACCACGTTGTCGGCA 59.901 50.000 0.00 0.00 41.85 5.69
2465 2975 0.379316 AGAAAAACCACGTTGTCGGC 59.621 50.000 0.00 0.00 41.85 5.54
2466 2976 2.540157 GGAAGAAAAACCACGTTGTCGG 60.540 50.000 0.00 0.00 41.85 4.79
2467 2977 2.711885 GGAAGAAAAACCACGTTGTCG 58.288 47.619 0.00 0.00 43.34 4.35
2468 2978 2.540157 CCGGAAGAAAAACCACGTTGTC 60.540 50.000 0.00 0.00 0.00 3.18
2469 2979 1.402613 CCGGAAGAAAAACCACGTTGT 59.597 47.619 0.00 0.00 0.00 3.32
2470 2980 1.268845 CCCGGAAGAAAAACCACGTTG 60.269 52.381 0.73 0.00 0.00 4.10
2471 2981 1.026584 CCCGGAAGAAAAACCACGTT 58.973 50.000 0.73 0.00 0.00 3.99
2472 2982 0.180878 TCCCGGAAGAAAAACCACGT 59.819 50.000 0.73 0.00 0.00 4.49
2473 2983 0.589708 GTCCCGGAAGAAAAACCACG 59.410 55.000 0.73 0.00 0.00 4.94
2474 2984 0.589708 CGTCCCGGAAGAAAAACCAC 59.410 55.000 0.73 0.00 0.00 4.16
2475 2985 0.180878 ACGTCCCGGAAGAAAAACCA 59.819 50.000 0.73 0.00 0.00 3.67
2476 2986 0.870393 GACGTCCCGGAAGAAAAACC 59.130 55.000 0.73 0.00 0.00 3.27
2477 2987 0.509929 CGACGTCCCGGAAGAAAAAC 59.490 55.000 10.58 0.00 0.00 2.43
2478 2988 2.903284 CGACGTCCCGGAAGAAAAA 58.097 52.632 10.58 0.00 0.00 1.94
2479 2989 4.659480 CGACGTCCCGGAAGAAAA 57.341 55.556 10.58 0.00 0.00 2.29
2502 3012 0.244178 GGCTCCTATACAGCGGTAGC 59.756 60.000 2.53 1.51 45.58 3.58
2503 3013 0.522180 CGGCTCCTATACAGCGGTAG 59.478 60.000 2.53 0.00 37.81 3.18
2504 3014 0.892358 CCGGCTCCTATACAGCGGTA 60.892 60.000 0.00 0.00 37.81 4.02
2505 3015 2.201022 CCGGCTCCTATACAGCGGT 61.201 63.158 0.00 0.00 37.81 5.68
2506 3016 1.901948 TCCGGCTCCTATACAGCGG 60.902 63.158 0.00 0.00 37.81 5.52
2507 3017 1.286260 GTCCGGCTCCTATACAGCG 59.714 63.158 0.00 0.00 37.81 5.18
2508 3018 0.969894 ATGTCCGGCTCCTATACAGC 59.030 55.000 0.00 0.00 36.02 4.40
2509 3019 2.230025 CAGATGTCCGGCTCCTATACAG 59.770 54.545 0.00 0.00 0.00 2.74
2510 3020 2.239400 CAGATGTCCGGCTCCTATACA 58.761 52.381 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.