Multiple sequence alignment - TraesCS5A01G138500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G138500 chr5A 100.000 6203 0 0 1 6203 310983825 310977623 0.000000e+00 11455
1 TraesCS5A01G138500 chr5D 94.709 2608 87 27 1148 3741 241269385 241266815 0.000000e+00 4004
2 TraesCS5A01G138500 chr5D 94.004 1351 53 8 3761 5098 241266742 241265407 0.000000e+00 2021
3 TraesCS5A01G138500 chr5D 88.609 1071 70 26 1 1067 241270878 241269856 0.000000e+00 1254
4 TraesCS5A01G138500 chr5D 90.491 652 37 14 5095 5739 241265327 241264694 0.000000e+00 837
5 TraesCS5A01G138500 chr5D 91.200 125 11 0 5740 5864 241264290 241264166 2.970000e-38 171
6 TraesCS5A01G138500 chr5B 93.302 1911 76 21 867 2759 262358940 262360816 0.000000e+00 2772
7 TraesCS5A01G138500 chr5B 95.022 1346 57 8 3761 5098 262364040 262365383 0.000000e+00 2106
8 TraesCS5A01G138500 chr5B 95.816 980 33 6 2754 3731 262362984 262363957 0.000000e+00 1576
9 TraesCS5A01G138500 chr5B 93.142 802 43 6 1 795 262357712 262358508 0.000000e+00 1166
10 TraesCS5A01G138500 chr5B 93.241 503 26 6 5094 5588 262365539 262366041 0.000000e+00 734
11 TraesCS5A01G138500 chr5B 82.158 482 66 10 5591 6060 262422193 262422666 4.510000e-106 396
12 TraesCS5A01G138500 chr7A 90.719 334 27 4 4055 4384 94180376 94180709 5.710000e-120 442
13 TraesCS5A01G138500 chr7A 90.323 341 25 3 4055 4387 93921264 93921604 2.050000e-119 440
14 TraesCS5A01G138500 chr7A 89.318 337 29 4 4055 4384 94211584 94211920 3.460000e-112 416
15 TraesCS5A01G138500 chr4B 87.601 371 33 10 4055 4422 40556851 40557211 9.620000e-113 418
16 TraesCS5A01G138500 chr4B 86.528 193 17 6 3870 4054 40556621 40556812 2.930000e-48 204
17 TraesCS5A01G138500 chr7D 92.558 215 15 1 4055 4268 566230583 566230797 2.170000e-79 307
18 TraesCS5A01G138500 chr7D 91.176 102 7 2 3870 3970 92014963 92015063 3.020000e-28 137
19 TraesCS5A01G138500 chr7B 94.253 87 4 1 3873 3958 42157195 42157109 1.400000e-26 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G138500 chr5A 310977623 310983825 6202 True 11455.0 11455 100.0000 1 6203 1 chr5A.!!$R1 6202
1 TraesCS5A01G138500 chr5D 241264166 241270878 6712 True 1657.4 4004 91.8026 1 5864 5 chr5D.!!$R1 5863
2 TraesCS5A01G138500 chr5B 262357712 262366041 8329 False 1670.8 2772 94.1046 1 5588 5 chr5B.!!$F2 5587
3 TraesCS5A01G138500 chr4B 40556621 40557211 590 False 311.0 418 87.0645 3870 4422 2 chr4B.!!$F1 552


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
775 792 0.107945 AATTCTCAGTCTCCAGCGGC 60.108 55.000 0.00 0.00 0.00 6.53 F
1077 1454 0.037046 GTACGTACCCCCACAACCAG 60.037 60.000 15.00 0.00 0.00 4.00 F
1614 2384 1.067354 CCCTGCATTTCTTTGTCTGGC 60.067 52.381 0.00 0.00 0.00 4.85 F
1797 2567 1.358725 TAACTCGGTTGCATGCGAGC 61.359 55.000 24.43 24.43 32.35 5.03 F
1907 2677 1.408969 AATTCCGTTTGCCCAACAGT 58.591 45.000 0.00 0.00 34.68 3.55 F
3061 6012 1.542915 GAACTGCAGGCAACATGTGAT 59.457 47.619 19.93 0.00 41.41 3.06 F
4436 7494 0.951558 AGGTAACAAAAGCGGCACTG 59.048 50.000 1.45 0.00 41.41 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1956 2727 1.331756 CTGGTGTTGAACTGTGCTGTC 59.668 52.381 0.0 0.0 0.00 3.51 R
2446 3218 1.754226 TGCACCTCAAAAACCAGGAAC 59.246 47.619 0.0 0.0 33.52 3.62 R
3074 6025 1.888512 GTTCTTTGCTGCCCAATCTGA 59.111 47.619 0.0 0.0 32.49 3.27 R
3773 6781 1.398041 TCACAAGCATGATAAGCACGC 59.602 47.619 0.0 0.0 35.56 5.34 R
3804 6812 6.240549 ACACCCTTATGAAGTCAGGAATAG 57.759 41.667 0.0 0.0 0.00 1.73 R
4687 7753 0.038021 TTAGTGCATGGAAGCCAGCA 59.962 50.000 0.0 0.0 36.75 4.41 R
6049 9690 0.035739 TACCGTTGTTCTCCAAGGCC 59.964 55.000 0.0 0.0 37.56 5.19 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
137 138 4.868172 TGAATGTCCAGATCCTCCATTT 57.132 40.909 0.00 0.00 0.00 2.32
192 193 5.952816 CGCTCTCGTAATAAAGTTCATGTC 58.047 41.667 0.00 0.00 0.00 3.06
322 335 5.745312 TCATATGGTGCCCATTAGTCTAG 57.255 43.478 11.36 0.00 42.23 2.43
323 336 5.402630 TCATATGGTGCCCATTAGTCTAGA 58.597 41.667 11.36 0.00 42.23 2.43
324 337 6.025539 TCATATGGTGCCCATTAGTCTAGAT 58.974 40.000 11.36 0.00 42.23 1.98
325 338 4.630644 ATGGTGCCCATTAGTCTAGATG 57.369 45.455 0.00 0.00 42.23 2.90
326 339 3.653164 TGGTGCCCATTAGTCTAGATGA 58.347 45.455 0.00 0.00 0.00 2.92
327 340 3.388024 TGGTGCCCATTAGTCTAGATGAC 59.612 47.826 0.00 0.00 45.67 3.06
328 341 6.403477 ATGGTGCCCATTAGTCTAGATGACA 61.403 44.000 0.00 0.00 42.23 3.58
329 342 7.663830 ATGGTGCCCATTAGTCTAGATGACAT 61.664 42.308 0.00 0.00 42.23 3.06
330 343 8.409608 ATGGTGCCCATTAGTCTAGATGACATA 61.410 40.741 0.00 0.00 42.23 2.29
444 457 2.815647 GGCCGAAACGAGCTCCAG 60.816 66.667 8.47 0.00 0.00 3.86
474 487 2.261671 CCTGTACCGCGCTCTTGT 59.738 61.111 5.56 0.00 0.00 3.16
489 502 0.679505 CTTGTGTGAGAGGGACGGAA 59.320 55.000 0.00 0.00 0.00 4.30
506 519 0.176680 GAAGAAGAGAGCGGCCATGA 59.823 55.000 2.24 0.00 0.00 3.07
513 526 4.148825 AGCGGCCATGACTCGGTC 62.149 66.667 2.24 0.00 0.00 4.79
516 529 2.264794 GGCCATGACTCGGTCGTT 59.735 61.111 0.00 0.00 34.95 3.85
517 530 2.100631 GGCCATGACTCGGTCGTTG 61.101 63.158 0.00 0.00 34.95 4.10
525 538 1.153429 CTCGGTCGTTGGGGGAATC 60.153 63.158 0.00 0.00 0.00 2.52
535 548 3.389983 CGTTGGGGGAATCCTTGTATCTA 59.610 47.826 0.00 0.00 35.33 1.98
542 555 5.248705 GGGGAATCCTTGTATCTAGTAAGGG 59.751 48.000 0.00 0.00 41.01 3.95
547 560 4.141321 TCCTTGTATCTAGTAAGGGCGAGA 60.141 45.833 13.72 0.00 41.01 4.04
612 625 3.660732 GACGGCGGGAGAAAGGGTC 62.661 68.421 13.24 0.00 0.00 4.46
613 626 3.391382 CGGCGGGAGAAAGGGTCT 61.391 66.667 0.00 0.00 40.25 3.85
614 627 2.269241 GGCGGGAGAAAGGGTCTG 59.731 66.667 0.00 0.00 36.41 3.51
630 643 1.882623 GTCTGTGAAGAAGCAAAGGGG 59.117 52.381 0.00 0.00 0.00 4.79
631 644 1.494721 TCTGTGAAGAAGCAAAGGGGT 59.505 47.619 0.00 0.00 0.00 4.95
632 645 1.882623 CTGTGAAGAAGCAAAGGGGTC 59.117 52.381 0.00 0.00 0.00 4.46
644 657 2.949644 CAAAGGGGTCACGTTTCTTTCT 59.050 45.455 0.00 0.00 35.15 2.52
696 709 1.817099 GCCTCTCAGCCGTTGGATG 60.817 63.158 0.00 0.00 40.92 3.51
721 734 3.711541 GAAGCCGTATCCGCACCGT 62.712 63.158 0.00 0.00 0.00 4.83
769 783 5.995446 AGGGTTTATCAATTCTCAGTCTCC 58.005 41.667 0.00 0.00 0.00 3.71
773 790 2.662006 TCAATTCTCAGTCTCCAGCG 57.338 50.000 0.00 0.00 0.00 5.18
775 792 0.107945 AATTCTCAGTCTCCAGCGGC 60.108 55.000 0.00 0.00 0.00 6.53
795 812 4.465446 TGCTCCTCCCCTCCTCCG 62.465 72.222 0.00 0.00 0.00 4.63
817 834 3.374402 CCCGCCAGTCTCGACAGT 61.374 66.667 0.00 0.00 0.00 3.55
822 839 1.210413 CCAGTCTCGACAGTCACCG 59.790 63.158 0.41 0.00 0.00 4.94
853 870 3.477224 CTCTCAGCTACTCGCCGCC 62.477 68.421 0.00 0.00 40.39 6.13
854 871 4.914420 CTCAGCTACTCGCCGCCG 62.914 72.222 0.00 0.00 40.39 6.46
970 1347 2.238701 CCCCAACCCTAGGCAAGGT 61.239 63.158 2.05 0.00 44.90 3.50
972 1349 0.996583 CCCAACCCTAGGCAAGGTAA 59.003 55.000 2.05 0.00 44.90 2.85
1077 1454 0.037046 GTACGTACCCCCACAACCAG 60.037 60.000 15.00 0.00 0.00 4.00
1083 1460 2.672996 CCCCACAACCAGCTTCCG 60.673 66.667 0.00 0.00 0.00 4.30
1115 1492 1.228675 CTTGCTTGCAACCCCTCCT 60.229 57.895 3.70 0.00 0.00 3.69
1117 1494 2.361737 GCTTGCAACCCCTCCTCC 60.362 66.667 0.00 0.00 0.00 4.30
1156 1915 2.032054 ACCACTAATCGATTGCGCATTG 59.968 45.455 20.87 3.99 37.46 2.82
1240 2006 2.095212 TCGTCAGTTCATCTTCACCTCG 60.095 50.000 0.00 0.00 0.00 4.63
1258 2026 4.037446 ACCTCGACTATCAGCTTTCATCTC 59.963 45.833 0.00 0.00 0.00 2.75
1288 2056 5.818336 GGAGGATTTAGAGTTTTAGCACTCC 59.182 44.000 0.00 0.00 43.89 3.85
1299 2067 6.303839 AGTTTTAGCACTCCAATTTACTCCA 58.696 36.000 0.00 0.00 0.00 3.86
1303 2071 7.775053 TTAGCACTCCAATTTACTCCAAATT 57.225 32.000 0.00 0.00 45.72 1.82
1420 2188 1.153667 CCAGACGAAGCTGAGCTCC 60.154 63.158 7.72 0.00 38.25 4.70
1437 2205 1.079256 CCCTGAGAGTGTCCCCAGA 59.921 63.158 0.00 0.00 0.00 3.86
1569 2338 3.187227 CGGAATGTGTCTTGTCCAAAGAG 59.813 47.826 0.00 0.00 0.00 2.85
1614 2384 1.067354 CCCTGCATTTCTTTGTCTGGC 60.067 52.381 0.00 0.00 0.00 4.85
1705 2475 5.078411 ACCATGTGTCTGTATGAGAAGAC 57.922 43.478 0.00 0.00 42.61 3.01
1744 2514 7.701539 TTTTATACTCATCAACTGCCAATGT 57.298 32.000 0.00 0.00 0.00 2.71
1786 2556 4.641989 ACGTTGGTATCTATGTAACTCGGT 59.358 41.667 0.00 0.00 0.00 4.69
1797 2567 1.358725 TAACTCGGTTGCATGCGAGC 61.359 55.000 24.43 24.43 32.35 5.03
1907 2677 1.408969 AATTCCGTTTGCCCAACAGT 58.591 45.000 0.00 0.00 34.68 3.55
1914 2684 2.418060 CGTTTGCCCAACAGTTTTTCCT 60.418 45.455 0.00 0.00 34.68 3.36
1936 2706 9.541884 TTCCTTATTTTAGTGGCTAATTTTCCT 57.458 29.630 0.00 0.00 0.00 3.36
1947 2718 5.415701 TGGCTAATTTTCCTCAACTGATCAC 59.584 40.000 0.00 0.00 0.00 3.06
1956 2727 9.695526 TTTTCCTCAACTGATCACAAAATAATG 57.304 29.630 0.00 0.00 0.00 1.90
1964 2735 6.207221 ACTGATCACAAAATAATGACAGCACA 59.793 34.615 0.00 0.00 32.16 4.57
1965 2736 6.614160 TGATCACAAAATAATGACAGCACAG 58.386 36.000 0.00 0.00 0.00 3.66
1966 2737 6.207221 TGATCACAAAATAATGACAGCACAGT 59.793 34.615 0.00 0.00 0.00 3.55
1967 2738 6.389830 TCACAAAATAATGACAGCACAGTT 57.610 33.333 0.00 0.00 0.00 3.16
1968 2739 6.437928 TCACAAAATAATGACAGCACAGTTC 58.562 36.000 0.00 0.00 0.00 3.01
1969 2740 6.039159 TCACAAAATAATGACAGCACAGTTCA 59.961 34.615 0.00 0.00 0.00 3.18
2128 2900 3.009363 TCTCTCTGTGCATGATTTTCCCA 59.991 43.478 0.00 0.00 0.00 4.37
2154 2926 8.860088 ACTTTTCTAACATACTTGCTCCATTTT 58.140 29.630 0.00 0.00 0.00 1.82
2178 2950 5.290493 TGGCTTTAGTCTGTTCTCTCAAA 57.710 39.130 0.00 0.00 0.00 2.69
2189 2961 9.007901 AGTCTGTTCTCTCAAAATTAAATCCTG 57.992 33.333 0.00 0.00 0.00 3.86
2193 2965 8.299570 TGTTCTCTCAAAATTAAATCCTGAAGC 58.700 33.333 0.00 0.00 0.00 3.86
2219 2991 9.092876 CTGCTCTTTTAGAATATTCTCGAGTTT 57.907 33.333 21.17 3.71 38.70 2.66
2473 3245 5.453198 CCTGGTTTTTGAGGTGCATAACTTT 60.453 40.000 0.00 0.00 0.00 2.66
2769 5720 4.810491 TGAGTTGGCAATTTTCTTTTCAGC 59.190 37.500 1.92 0.00 0.00 4.26
2850 5801 2.777692 TGTCACCTCTTCTTCCTTTGGT 59.222 45.455 0.00 0.00 0.00 3.67
2922 5873 3.093057 TGGTTCTTCTCCTGAGCTAGTC 58.907 50.000 0.00 0.00 0.00 2.59
3061 6012 1.542915 GAACTGCAGGCAACATGTGAT 59.457 47.619 19.93 0.00 41.41 3.06
3064 6015 2.489329 ACTGCAGGCAACATGTGATAAC 59.511 45.455 19.93 0.00 41.41 1.89
3156 6107 6.655062 TGCAAACAGAAAGATTTACACTACG 58.345 36.000 0.00 0.00 0.00 3.51
3284 6235 5.669904 TGGGATGTTTCTCAAGGTATATCCA 59.330 40.000 0.00 0.00 39.02 3.41
3313 6264 8.992349 TCTTCTAAATTCAGACATCCAATCCTA 58.008 33.333 0.00 0.00 0.00 2.94
3456 6408 7.873739 ACTTTTTGACTGCTAAATTGTATGC 57.126 32.000 0.00 0.00 0.00 3.14
3722 6677 7.697691 AGCATAATTCCTAAGTTGTGAAATCG 58.302 34.615 0.00 0.00 0.00 3.34
3731 6686 3.067106 AGTTGTGAAATCGACGAGCAAT 58.933 40.909 3.01 0.00 0.00 3.56
3732 6687 3.120546 AGTTGTGAAATCGACGAGCAATG 60.121 43.478 3.01 0.00 0.00 2.82
3733 6688 2.682836 TGTGAAATCGACGAGCAATGA 58.317 42.857 3.01 0.00 0.00 2.57
3734 6689 3.261580 TGTGAAATCGACGAGCAATGAT 58.738 40.909 3.01 0.00 0.00 2.45
3735 6690 4.429108 TGTGAAATCGACGAGCAATGATA 58.571 39.130 3.01 0.00 0.00 2.15
3753 6708 9.350357 GCAATGATATGCATAATTCCTAAGTTG 57.650 33.333 11.13 7.14 45.70 3.16
3782 6790 4.960938 TCCATGAAATCTAGCGTGCTTAT 58.039 39.130 0.00 0.00 0.00 1.73
3784 6792 4.751600 CCATGAAATCTAGCGTGCTTATCA 59.248 41.667 0.00 0.00 0.00 2.15
3914 6922 8.430801 TGTTTCTTGGGATTTGTTACATTTTG 57.569 30.769 0.00 0.00 0.00 2.44
4281 7336 6.591935 TCAAAGCCACCATCTTTAGGTATAG 58.408 40.000 0.00 0.00 37.23 1.31
4282 7337 5.568620 AAGCCACCATCTTTAGGTATAGG 57.431 43.478 0.00 0.00 37.23 2.57
4308 7365 4.843220 ACTGCATTCTTTCAGTTCAAGG 57.157 40.909 0.00 0.00 40.32 3.61
4371 7429 4.973168 TGTGTTCCTTAACTTCAGATGCT 58.027 39.130 0.00 0.00 36.51 3.79
4436 7494 0.951558 AGGTAACAAAAGCGGCACTG 59.048 50.000 1.45 0.00 41.41 3.66
4586 7646 9.645059 TGAAGTAACATGTTTTGTGAATTCAAA 57.355 25.926 17.78 0.76 46.02 2.69
4657 7723 9.659830 CGCTTTATATATTTGTAAGGTTGAACC 57.340 33.333 6.16 6.16 38.99 3.62
4707 7773 0.453390 GCTGGCTTCCATGCACTAAC 59.547 55.000 0.00 0.00 30.82 2.34
4835 7904 3.521126 AGGGACTTGTTGCTGTCTATGAT 59.479 43.478 0.00 0.00 27.25 2.45
4850 7919 6.131961 TGTCTATGATGTGAGAAGATCTCCA 58.868 40.000 0.00 3.59 42.73 3.86
4856 7925 4.963318 TGTGAGAAGATCTCCACTTGTT 57.037 40.909 17.89 0.00 42.73 2.83
4970 8039 2.743664 TCTGATGAAATTCCTGTGCACG 59.256 45.455 13.13 7.03 0.00 5.34
5087 8156 1.589414 AAGATGGAGGTCCCTGAAGG 58.411 55.000 0.00 0.00 35.38 3.46
5266 8500 8.950210 ACCTATTTCTGATTTCGGCAATATATG 58.050 33.333 0.00 0.00 0.00 1.78
5308 8543 3.181420 GGGCTTCTGATACCTCCCTACTA 60.181 52.174 0.00 0.00 0.00 1.82
5359 8596 5.367302 TCCTTTTTCTTTTTGCATTGGGAG 58.633 37.500 0.00 0.00 0.00 4.30
5408 8645 3.698040 ACTAGTATTGGTAGTGACGGTGG 59.302 47.826 0.00 0.00 29.24 4.61
5409 8646 1.206371 AGTATTGGTAGTGACGGTGGC 59.794 52.381 0.00 0.00 0.00 5.01
5440 8677 2.505819 AGCATCTACAACCGAATCCCTT 59.494 45.455 0.00 0.00 0.00 3.95
5470 8707 2.092429 TCCAAACTTTCACTCACTGCCT 60.092 45.455 0.00 0.00 0.00 4.75
5538 8775 2.086599 TTTGGGCTGTATGGCACCCA 62.087 55.000 8.64 8.64 42.55 4.51
5572 8809 0.916086 TATGTGGAGCGGATTTGGGT 59.084 50.000 0.00 0.00 0.00 4.51
5612 8850 0.601576 TGTTCACCACGTTGGATCCG 60.602 55.000 7.39 0.00 40.96 4.18
5613 8851 1.669760 TTCACCACGTTGGATCCGC 60.670 57.895 7.39 1.37 40.96 5.54
5625 8863 1.595382 GATCCGCCAGATTGGACCG 60.595 63.158 0.00 0.00 40.96 4.79
5632 8870 1.141053 GCCAGATTGGACCGATTACCT 59.859 52.381 0.00 0.00 40.96 3.08
5633 8871 2.421529 GCCAGATTGGACCGATTACCTT 60.422 50.000 0.00 0.00 40.96 3.50
5635 8873 3.118408 CCAGATTGGACCGATTACCTTCA 60.118 47.826 0.00 0.00 40.96 3.02
5638 8876 6.288294 CAGATTGGACCGATTACCTTCATTA 58.712 40.000 0.00 0.00 0.00 1.90
5653 8891 5.926663 CCTTCATTAGGGTTTACTAGTCCC 58.073 45.833 9.67 9.67 40.67 4.46
5654 8892 5.163227 CCTTCATTAGGGTTTACTAGTCCCC 60.163 48.000 13.32 13.96 41.95 4.81
5691 8929 9.956640 TCATATTTTGACCATGGCTTTTTAATT 57.043 25.926 13.04 0.00 0.00 1.40
5803 9444 4.447138 TTTAACACATTGGAGAGGTGGT 57.553 40.909 0.00 0.00 44.07 4.16
5825 9466 1.139095 GCTGGCTCTTGCTTCATGC 59.861 57.895 0.00 0.00 43.25 4.06
5858 9499 1.968017 CTCGCCCATGTGTGCTTGT 60.968 57.895 0.00 0.00 0.00 3.16
5860 9501 2.652530 GCCCATGTGTGCTTGTGG 59.347 61.111 0.00 0.00 0.00 4.17
5864 9505 1.661480 CATGTGTGCTTGTGGTGGG 59.339 57.895 0.00 0.00 0.00 4.61
5865 9506 1.531365 ATGTGTGCTTGTGGTGGGG 60.531 57.895 0.00 0.00 0.00 4.96
5866 9507 3.605664 GTGTGCTTGTGGTGGGGC 61.606 66.667 0.00 0.00 0.00 5.80
5867 9508 4.912395 TGTGCTTGTGGTGGGGCC 62.912 66.667 0.00 0.00 37.90 5.80
5886 9527 4.722700 GTGGTGGCGCTGGACCAT 62.723 66.667 23.17 0.00 44.08 3.55
5887 9528 4.720902 TGGTGGCGCTGGACCATG 62.721 66.667 18.57 0.00 39.95 3.66
5888 9529 4.722700 GGTGGCGCTGGACCATGT 62.723 66.667 7.64 0.00 39.95 3.21
5889 9530 2.672996 GTGGCGCTGGACCATGTT 60.673 61.111 7.64 0.00 39.95 2.71
5890 9531 2.359850 TGGCGCTGGACCATGTTC 60.360 61.111 7.64 0.00 30.29 3.18
5891 9532 3.134127 GGCGCTGGACCATGTTCC 61.134 66.667 7.64 1.52 36.03 3.62
5892 9533 3.134127 GCGCTGGACCATGTTCCC 61.134 66.667 6.86 0.00 34.33 3.97
5893 9534 2.350895 CGCTGGACCATGTTCCCA 59.649 61.111 6.86 2.51 34.33 4.37
5897 9538 1.685224 TGGACCATGTTCCCAGAGC 59.315 57.895 6.86 0.00 34.33 4.09
5898 9539 1.450312 GGACCATGTTCCCAGAGCG 60.450 63.158 0.00 0.00 0.00 5.03
5899 9540 1.596934 GACCATGTTCCCAGAGCGA 59.403 57.895 0.00 0.00 0.00 4.93
5900 9541 0.179000 GACCATGTTCCCAGAGCGAT 59.821 55.000 0.00 0.00 0.00 4.58
5901 9542 0.179000 ACCATGTTCCCAGAGCGATC 59.821 55.000 0.00 0.00 0.00 3.69
5902 9543 0.877649 CCATGTTCCCAGAGCGATCG 60.878 60.000 11.69 11.69 0.00 3.69
5903 9544 1.227380 ATGTTCCCAGAGCGATCGC 60.227 57.895 32.15 32.15 42.33 4.58
5924 9565 3.371168 CTTCGTCAGAAGCTCTATCTGC 58.629 50.000 8.75 4.30 46.12 4.26
5925 9566 2.649190 TCGTCAGAAGCTCTATCTGCT 58.351 47.619 8.75 0.00 43.19 4.24
5926 9567 2.357323 TCGTCAGAAGCTCTATCTGCTG 59.643 50.000 8.75 4.51 43.19 4.41
5927 9568 2.472816 GTCAGAAGCTCTATCTGCTGC 58.527 52.381 8.75 0.00 43.19 5.25
5928 9569 2.105766 TCAGAAGCTCTATCTGCTGCA 58.894 47.619 8.75 0.88 43.19 4.41
5929 9570 2.498885 TCAGAAGCTCTATCTGCTGCAA 59.501 45.455 8.75 0.00 43.19 4.08
5930 9571 2.867368 CAGAAGCTCTATCTGCTGCAAG 59.133 50.000 3.02 0.00 41.03 4.01
5931 9572 2.765135 AGAAGCTCTATCTGCTGCAAGA 59.235 45.455 3.02 2.91 41.03 3.02
5932 9573 3.197333 AGAAGCTCTATCTGCTGCAAGAA 59.803 43.478 3.02 0.00 41.03 2.52
5933 9574 2.903798 AGCTCTATCTGCTGCAAGAAC 58.096 47.619 3.02 0.00 39.56 3.01
5934 9575 2.500910 AGCTCTATCTGCTGCAAGAACT 59.499 45.455 3.02 1.82 39.56 3.01
5935 9576 2.865551 GCTCTATCTGCTGCAAGAACTC 59.134 50.000 3.02 0.00 34.07 3.01
5936 9577 3.430651 GCTCTATCTGCTGCAAGAACTCT 60.431 47.826 3.02 0.00 34.07 3.24
5937 9578 4.757594 CTCTATCTGCTGCAAGAACTCTT 58.242 43.478 3.02 0.00 34.07 2.85
5938 9579 4.753233 TCTATCTGCTGCAAGAACTCTTC 58.247 43.478 3.02 0.00 34.07 2.87
5939 9580 3.699411 ATCTGCTGCAAGAACTCTTCT 57.301 42.857 3.02 0.00 43.15 2.85
5940 9581 3.037431 TCTGCTGCAAGAACTCTTCTC 57.963 47.619 3.02 0.00 39.61 2.87
5941 9582 2.075338 CTGCTGCAAGAACTCTTCTCC 58.925 52.381 3.02 0.00 39.61 3.71
5942 9583 1.696336 TGCTGCAAGAACTCTTCTCCT 59.304 47.619 0.00 0.00 39.61 3.69
5943 9584 2.105477 TGCTGCAAGAACTCTTCTCCTT 59.895 45.455 0.00 0.00 39.61 3.36
5944 9585 2.483491 GCTGCAAGAACTCTTCTCCTTG 59.517 50.000 0.00 0.00 39.61 3.61
5945 9586 3.737850 CTGCAAGAACTCTTCTCCTTGT 58.262 45.455 0.00 0.00 39.61 3.16
5946 9587 4.800914 GCTGCAAGAACTCTTCTCCTTGTA 60.801 45.833 0.00 0.00 39.61 2.41
5947 9588 5.486526 CTGCAAGAACTCTTCTCCTTGTAT 58.513 41.667 0.00 0.00 39.61 2.29
5948 9589 5.240891 TGCAAGAACTCTTCTCCTTGTATG 58.759 41.667 0.00 0.00 39.61 2.39
5949 9590 5.221722 TGCAAGAACTCTTCTCCTTGTATGT 60.222 40.000 0.00 0.00 39.61 2.29
5950 9591 5.121454 GCAAGAACTCTTCTCCTTGTATGTG 59.879 44.000 0.00 0.00 39.61 3.21
5951 9592 5.413309 AGAACTCTTCTCCTTGTATGTGG 57.587 43.478 0.00 0.00 34.07 4.17
5952 9593 4.841246 AGAACTCTTCTCCTTGTATGTGGT 59.159 41.667 0.00 0.00 34.07 4.16
5953 9594 5.308237 AGAACTCTTCTCCTTGTATGTGGTT 59.692 40.000 0.00 0.00 34.07 3.67
5954 9595 4.899502 ACTCTTCTCCTTGTATGTGGTTG 58.100 43.478 0.00 0.00 0.00 3.77
5955 9596 3.674997 TCTTCTCCTTGTATGTGGTTGC 58.325 45.455 0.00 0.00 0.00 4.17
5956 9597 2.093306 TCTCCTTGTATGTGGTTGCG 57.907 50.000 0.00 0.00 0.00 4.85
5957 9598 1.086696 CTCCTTGTATGTGGTTGCGG 58.913 55.000 0.00 0.00 0.00 5.69
5958 9599 0.958382 TCCTTGTATGTGGTTGCGGC 60.958 55.000 0.00 0.00 0.00 6.53
5959 9600 1.506262 CTTGTATGTGGTTGCGGCC 59.494 57.895 0.00 0.00 0.00 6.13
5960 9601 0.960364 CTTGTATGTGGTTGCGGCCT 60.960 55.000 0.00 0.00 0.00 5.19
5961 9602 0.538516 TTGTATGTGGTTGCGGCCTT 60.539 50.000 0.00 0.00 0.00 4.35
5962 9603 0.958382 TGTATGTGGTTGCGGCCTTC 60.958 55.000 0.00 0.00 0.00 3.46
5963 9604 0.958382 GTATGTGGTTGCGGCCTTCA 60.958 55.000 0.00 0.00 0.00 3.02
5964 9605 0.250945 TATGTGGTTGCGGCCTTCAA 60.251 50.000 0.00 1.65 0.00 2.69
5965 9606 1.526575 ATGTGGTTGCGGCCTTCAAG 61.527 55.000 0.00 0.00 0.00 3.02
5966 9607 1.896660 GTGGTTGCGGCCTTCAAGA 60.897 57.895 0.00 0.00 0.00 3.02
5967 9608 1.600636 TGGTTGCGGCCTTCAAGAG 60.601 57.895 0.00 0.00 0.00 2.85
5976 9617 2.573869 CTTCAAGAGGAGGCGCGA 59.426 61.111 12.10 0.00 0.00 5.87
5977 9618 1.807573 CTTCAAGAGGAGGCGCGAC 60.808 63.158 12.10 7.34 0.00 5.19
5978 9619 2.219325 CTTCAAGAGGAGGCGCGACT 62.219 60.000 18.34 18.34 0.00 4.18
5979 9620 2.492449 TTCAAGAGGAGGCGCGACTG 62.492 60.000 25.24 4.15 0.00 3.51
5980 9621 4.443266 AAGAGGAGGCGCGACTGC 62.443 66.667 27.83 27.83 37.91 4.40
5987 9628 4.824166 GGCGCGACTGCTGCAATG 62.824 66.667 12.10 0.00 40.68 2.82
5988 9629 3.792047 GCGCGACTGCTGCAATGA 61.792 61.111 12.10 0.00 39.38 2.57
5989 9630 2.097160 CGCGACTGCTGCAATGAC 59.903 61.111 0.00 0.00 39.65 3.06
5990 9631 2.097160 GCGACTGCTGCAATGACG 59.903 61.111 3.02 6.59 38.39 4.35
5991 9632 2.097160 CGACTGCTGCAATGACGC 59.903 61.111 3.02 0.00 0.00 5.19
5992 9633 2.385875 CGACTGCTGCAATGACGCT 61.386 57.895 3.02 0.00 0.00 5.07
5993 9634 1.871772 GACTGCTGCAATGACGCTT 59.128 52.632 3.02 0.00 0.00 4.68
5994 9635 0.453950 GACTGCTGCAATGACGCTTG 60.454 55.000 3.02 0.00 0.00 4.01
5995 9636 1.154093 CTGCTGCAATGACGCTTGG 60.154 57.895 3.02 0.00 0.00 3.61
5996 9637 1.859427 CTGCTGCAATGACGCTTGGT 61.859 55.000 3.02 0.00 0.00 3.67
5997 9638 1.286880 GCTGCAATGACGCTTGGTT 59.713 52.632 0.00 0.00 0.00 3.67
5998 9639 0.730494 GCTGCAATGACGCTTGGTTC 60.730 55.000 0.00 0.00 0.00 3.62
5999 9640 0.877071 CTGCAATGACGCTTGGTTCT 59.123 50.000 0.00 0.00 0.00 3.01
6000 9641 0.874390 TGCAATGACGCTTGGTTCTC 59.126 50.000 0.00 0.00 0.00 2.87
6001 9642 0.874390 GCAATGACGCTTGGTTCTCA 59.126 50.000 0.00 0.00 0.00 3.27
6002 9643 1.470098 GCAATGACGCTTGGTTCTCAT 59.530 47.619 0.00 0.00 0.00 2.90
6003 9644 2.476854 GCAATGACGCTTGGTTCTCATC 60.477 50.000 0.00 0.00 0.00 2.92
6004 9645 2.743664 CAATGACGCTTGGTTCTCATCA 59.256 45.455 0.00 0.00 0.00 3.07
6005 9646 2.768253 TGACGCTTGGTTCTCATCAT 57.232 45.000 0.00 0.00 0.00 2.45
6006 9647 3.057969 TGACGCTTGGTTCTCATCATT 57.942 42.857 0.00 0.00 0.00 2.57
6007 9648 2.743664 TGACGCTTGGTTCTCATCATTG 59.256 45.455 0.00 0.00 0.00 2.82
6008 9649 2.086869 ACGCTTGGTTCTCATCATTGG 58.913 47.619 0.00 0.00 0.00 3.16
6009 9650 2.290260 ACGCTTGGTTCTCATCATTGGA 60.290 45.455 0.00 0.00 0.00 3.53
6010 9651 2.353889 CGCTTGGTTCTCATCATTGGAG 59.646 50.000 0.00 0.00 0.00 3.86
6011 9652 2.686915 GCTTGGTTCTCATCATTGGAGG 59.313 50.000 0.00 0.00 33.18 4.30
6012 9653 3.623203 GCTTGGTTCTCATCATTGGAGGA 60.623 47.826 0.00 0.00 33.18 3.71
6019 9660 4.274602 CTCATCATTGGAGGAGGAGATG 57.725 50.000 0.00 0.00 45.73 2.90
6020 9661 3.902467 CTCATCATTGGAGGAGGAGATGA 59.098 47.826 0.00 0.00 45.73 2.92
6021 9662 3.645212 TCATCATTGGAGGAGGAGATGAC 59.355 47.826 0.00 0.00 37.53 3.06
6022 9663 2.034878 TCATTGGAGGAGGAGATGACG 58.965 52.381 0.00 0.00 0.00 4.35
6023 9664 2.034878 CATTGGAGGAGGAGATGACGA 58.965 52.381 0.00 0.00 0.00 4.20
6024 9665 2.461300 TTGGAGGAGGAGATGACGAT 57.539 50.000 0.00 0.00 0.00 3.73
6025 9666 1.988293 TGGAGGAGGAGATGACGATC 58.012 55.000 0.00 0.00 0.00 3.69
6026 9667 1.253100 GGAGGAGGAGATGACGATCC 58.747 60.000 0.00 0.00 35.71 3.36
6027 9668 1.253100 GAGGAGGAGATGACGATCCC 58.747 60.000 0.00 0.00 36.14 3.85
6028 9669 0.856982 AGGAGGAGATGACGATCCCT 59.143 55.000 0.00 0.00 36.14 4.20
6029 9670 1.219213 AGGAGGAGATGACGATCCCTT 59.781 52.381 0.00 0.00 36.14 3.95
6030 9671 1.342819 GGAGGAGATGACGATCCCTTG 59.657 57.143 0.00 0.00 36.14 3.61
6031 9672 1.342819 GAGGAGATGACGATCCCTTGG 59.657 57.143 0.00 0.00 36.14 3.61
6032 9673 1.123928 GGAGATGACGATCCCTTGGT 58.876 55.000 0.00 0.00 0.00 3.67
6033 9674 1.069358 GGAGATGACGATCCCTTGGTC 59.931 57.143 0.00 0.00 0.00 4.02
6034 9675 0.747255 AGATGACGATCCCTTGGTCG 59.253 55.000 0.00 0.00 43.13 4.79
6035 9676 0.249489 GATGACGATCCCTTGGTCGG 60.249 60.000 0.00 0.00 41.87 4.79
6036 9677 0.686441 ATGACGATCCCTTGGTCGGA 60.686 55.000 0.00 0.00 41.87 4.55
6037 9678 1.320344 TGACGATCCCTTGGTCGGAG 61.320 60.000 0.00 0.00 41.87 4.63
6038 9679 1.000019 ACGATCCCTTGGTCGGAGA 60.000 57.895 0.00 0.00 41.87 3.71
6039 9680 0.613853 ACGATCCCTTGGTCGGAGAA 60.614 55.000 0.00 0.00 41.87 2.87
6040 9681 0.103208 CGATCCCTTGGTCGGAGAAG 59.897 60.000 0.00 0.00 39.69 2.85
6041 9682 1.486211 GATCCCTTGGTCGGAGAAGA 58.514 55.000 0.00 0.00 39.69 2.87
6042 9683 1.410882 GATCCCTTGGTCGGAGAAGAG 59.589 57.143 0.00 0.00 39.69 2.85
6043 9684 1.219393 CCCTTGGTCGGAGAAGAGC 59.781 63.158 0.00 0.00 39.69 4.09
6044 9685 1.261238 CCCTTGGTCGGAGAAGAGCT 61.261 60.000 0.00 0.00 39.69 4.09
6045 9686 0.174617 CCTTGGTCGGAGAAGAGCTC 59.825 60.000 5.27 5.27 39.69 4.09
6046 9687 0.891373 CTTGGTCGGAGAAGAGCTCA 59.109 55.000 17.77 0.00 45.81 4.26
6047 9688 1.273606 CTTGGTCGGAGAAGAGCTCAA 59.726 52.381 17.77 0.00 45.81 3.02
6048 9689 0.891373 TGGTCGGAGAAGAGCTCAAG 59.109 55.000 17.77 0.23 45.81 3.02
6049 9690 0.174617 GGTCGGAGAAGAGCTCAAGG 59.825 60.000 17.77 0.00 45.81 3.61
6050 9691 0.174617 GTCGGAGAAGAGCTCAAGGG 59.825 60.000 17.77 0.00 45.81 3.95
6051 9692 1.153469 CGGAGAAGAGCTCAAGGGC 60.153 63.158 17.77 0.69 45.81 5.19
6052 9693 1.223211 GGAGAAGAGCTCAAGGGCC 59.777 63.158 17.77 6.69 45.81 5.80
6053 9694 1.271127 GGAGAAGAGCTCAAGGGCCT 61.271 60.000 17.77 0.00 45.81 5.19
6054 9695 0.617935 GAGAAGAGCTCAAGGGCCTT 59.382 55.000 14.48 14.48 43.38 4.35
6055 9696 0.327591 AGAAGAGCTCAAGGGCCTTG 59.672 55.000 35.44 35.44 42.25 3.61
6056 9697 0.679321 GAAGAGCTCAAGGGCCTTGG 60.679 60.000 38.45 30.02 41.33 3.61
6057 9698 1.136329 AAGAGCTCAAGGGCCTTGGA 61.136 55.000 38.45 25.89 41.33 3.53
6058 9699 1.077858 GAGCTCAAGGGCCTTGGAG 60.078 63.158 38.45 32.15 41.33 3.86
6059 9700 1.539869 AGCTCAAGGGCCTTGGAGA 60.540 57.895 38.45 22.95 41.33 3.71
6060 9701 1.136329 AGCTCAAGGGCCTTGGAGAA 61.136 55.000 38.45 22.62 41.33 2.87
6061 9702 0.962855 GCTCAAGGGCCTTGGAGAAC 60.963 60.000 38.45 22.51 41.33 3.01
6062 9703 0.401738 CTCAAGGGCCTTGGAGAACA 59.598 55.000 38.45 21.61 41.33 3.18
6063 9704 0.850100 TCAAGGGCCTTGGAGAACAA 59.150 50.000 38.45 19.93 41.33 2.83
6064 9705 0.961753 CAAGGGCCTTGGAGAACAAC 59.038 55.000 34.03 0.00 37.77 3.32
6065 9706 0.537371 AAGGGCCTTGGAGAACAACG 60.537 55.000 20.19 0.00 34.76 4.10
6066 9707 1.971695 GGGCCTTGGAGAACAACGG 60.972 63.158 0.84 0.00 34.76 4.44
6067 9708 1.228154 GGCCTTGGAGAACAACGGT 60.228 57.895 0.00 0.00 34.76 4.83
6068 9709 0.035739 GGCCTTGGAGAACAACGGTA 59.964 55.000 0.00 0.00 34.76 4.02
6069 9710 1.439679 GCCTTGGAGAACAACGGTAG 58.560 55.000 0.00 0.00 34.76 3.18
6070 9711 1.439679 CCTTGGAGAACAACGGTAGC 58.560 55.000 0.00 0.00 34.76 3.58
6071 9712 1.068474 CTTGGAGAACAACGGTAGCG 58.932 55.000 13.69 13.69 34.76 4.26
6072 9713 0.320073 TTGGAGAACAACGGTAGCGG 60.320 55.000 19.72 4.06 33.18 5.52
6073 9714 1.291272 GGAGAACAACGGTAGCGGT 59.709 57.895 19.72 9.74 0.00 5.68
6074 9715 1.012486 GGAGAACAACGGTAGCGGTG 61.012 60.000 29.29 29.29 0.00 4.94
6075 9716 1.623973 GAGAACAACGGTAGCGGTGC 61.624 60.000 30.63 16.30 0.00 5.01
6076 9717 2.667199 AACAACGGTAGCGGTGCC 60.667 61.111 30.63 12.14 0.00 5.01
6077 9718 3.463728 AACAACGGTAGCGGTGCCA 62.464 57.895 30.63 0.00 0.00 4.92
6078 9719 2.666862 CAACGGTAGCGGTGCCAA 60.667 61.111 20.49 0.00 0.00 4.52
6079 9720 2.358247 AACGGTAGCGGTGCCAAG 60.358 61.111 21.72 8.71 0.00 3.61
6080 9721 2.874664 AACGGTAGCGGTGCCAAGA 61.875 57.895 21.72 0.00 0.00 3.02
6081 9722 2.180159 AACGGTAGCGGTGCCAAGAT 62.180 55.000 21.72 0.85 0.00 2.40
6082 9723 1.883084 CGGTAGCGGTGCCAAGATC 60.883 63.158 21.72 0.00 0.00 2.75
6083 9724 1.522569 GGTAGCGGTGCCAAGATCT 59.477 57.895 17.36 0.00 0.00 2.75
6084 9725 0.811616 GGTAGCGGTGCCAAGATCTG 60.812 60.000 17.36 0.00 0.00 2.90
6085 9726 0.175760 GTAGCGGTGCCAAGATCTGA 59.824 55.000 0.00 0.00 0.00 3.27
6086 9727 0.901827 TAGCGGTGCCAAGATCTGAA 59.098 50.000 0.00 0.00 0.00 3.02
6087 9728 0.674895 AGCGGTGCCAAGATCTGAAC 60.675 55.000 0.00 0.00 0.00 3.18
6088 9729 1.970917 GCGGTGCCAAGATCTGAACG 61.971 60.000 0.00 0.00 0.00 3.95
6089 9730 0.389817 CGGTGCCAAGATCTGAACGA 60.390 55.000 0.00 0.00 0.00 3.85
6090 9731 1.079503 GGTGCCAAGATCTGAACGAC 58.920 55.000 0.00 0.00 0.00 4.34
6091 9732 0.716108 GTGCCAAGATCTGAACGACG 59.284 55.000 0.00 0.00 0.00 5.12
6092 9733 0.389817 TGCCAAGATCTGAACGACGG 60.390 55.000 0.00 0.00 0.00 4.79
6093 9734 0.389948 GCCAAGATCTGAACGACGGT 60.390 55.000 0.00 0.00 0.00 4.83
6094 9735 1.350193 CCAAGATCTGAACGACGGTG 58.650 55.000 0.00 0.00 0.00 4.94
6095 9736 0.716108 CAAGATCTGAACGACGGTGC 59.284 55.000 0.00 0.00 0.00 5.01
6096 9737 0.732880 AAGATCTGAACGACGGTGCG 60.733 55.000 0.00 0.00 37.29 5.34
6097 9738 2.126071 ATCTGAACGACGGTGCGG 60.126 61.111 0.00 0.00 35.12 5.69
6098 9739 2.537792 GATCTGAACGACGGTGCGGA 62.538 60.000 0.00 0.00 41.44 5.54
6099 9740 2.814183 ATCTGAACGACGGTGCGGAC 62.814 60.000 0.00 0.00 39.98 4.79
6100 9741 4.651008 TGAACGACGGTGCGGACC 62.651 66.667 17.38 17.38 39.14 4.46
6101 9742 4.353437 GAACGACGGTGCGGACCT 62.353 66.667 24.50 11.10 40.58 3.85
6102 9743 4.657824 AACGACGGTGCGGACCTG 62.658 66.667 24.50 18.84 40.58 4.00
6105 9746 3.998672 GACGGTGCGGACCTGGAA 61.999 66.667 24.50 0.00 40.58 3.53
6106 9747 4.309950 ACGGTGCGGACCTGGAAC 62.310 66.667 24.50 0.00 40.58 3.62
6113 9754 2.047179 GGACCTGGAACCGACTGC 60.047 66.667 0.00 0.00 0.00 4.40
6114 9755 2.047179 GACCTGGAACCGACTGCC 60.047 66.667 0.00 0.00 0.00 4.85
6115 9756 3.607370 GACCTGGAACCGACTGCCC 62.607 68.421 0.00 0.00 0.00 5.36
6116 9757 4.760047 CCTGGAACCGACTGCCCG 62.760 72.222 0.00 0.00 0.00 6.13
6125 9766 4.329545 GACTGCCCGCCACCAAGA 62.330 66.667 0.00 0.00 0.00 3.02
6126 9767 3.628646 GACTGCCCGCCACCAAGAT 62.629 63.158 0.00 0.00 0.00 2.40
6127 9768 2.361610 CTGCCCGCCACCAAGATT 60.362 61.111 0.00 0.00 0.00 2.40
6128 9769 1.978617 CTGCCCGCCACCAAGATTT 60.979 57.895 0.00 0.00 0.00 2.17
6129 9770 2.216750 CTGCCCGCCACCAAGATTTG 62.217 60.000 0.00 0.00 0.00 2.32
6140 9781 0.240945 CAAGATTTGGACGGTGGTGC 59.759 55.000 0.00 0.00 34.67 5.01
6141 9782 1.234615 AAGATTTGGACGGTGGTGCG 61.235 55.000 0.00 0.00 37.30 5.34
6142 9783 2.671619 ATTTGGACGGTGGTGCGG 60.672 61.111 0.00 0.00 37.30 5.69
6143 9784 3.185299 ATTTGGACGGTGGTGCGGA 62.185 57.895 0.00 0.00 37.30 5.54
6144 9785 3.818121 TTTGGACGGTGGTGCGGAG 62.818 63.158 0.00 0.00 37.30 4.63
6157 9798 4.463879 CGGAGCTGGAGCCACCTG 62.464 72.222 0.00 0.32 43.38 4.00
6170 9811 4.947147 ACCTGCCCGCGCAAAGAA 62.947 61.111 8.75 0.00 46.66 2.52
6171 9812 4.404654 CCTGCCCGCGCAAAGAAC 62.405 66.667 8.75 0.00 46.66 3.01
6172 9813 4.404654 CTGCCCGCGCAAAGAACC 62.405 66.667 8.75 0.00 46.66 3.62
6174 9815 3.747976 GCCCGCGCAAAGAACCAT 61.748 61.111 8.75 0.00 34.03 3.55
6175 9816 2.179018 CCCGCGCAAAGAACCATG 59.821 61.111 8.75 0.00 0.00 3.66
6176 9817 2.331893 CCCGCGCAAAGAACCATGA 61.332 57.895 8.75 0.00 0.00 3.07
6177 9818 1.154225 CCGCGCAAAGAACCATGAC 60.154 57.895 8.75 0.00 0.00 3.06
6178 9819 1.577328 CCGCGCAAAGAACCATGACT 61.577 55.000 8.75 0.00 0.00 3.41
6179 9820 0.238289 CGCGCAAAGAACCATGACTT 59.762 50.000 8.75 0.00 0.00 3.01
6180 9821 1.689959 GCGCAAAGAACCATGACTTG 58.310 50.000 0.30 0.00 0.00 3.16
6190 9831 2.195389 CATGACTTGGGCATGGTGG 58.805 57.895 5.53 0.00 39.48 4.61
6191 9832 1.000739 ATGACTTGGGCATGGTGGG 59.999 57.895 0.00 0.00 0.00 4.61
6192 9833 1.803453 ATGACTTGGGCATGGTGGGT 61.803 55.000 0.00 0.00 0.00 4.51
6193 9834 1.978617 GACTTGGGCATGGTGGGTG 60.979 63.158 0.00 0.00 0.00 4.61
6194 9835 2.681064 CTTGGGCATGGTGGGTGG 60.681 66.667 0.00 0.00 0.00 4.61
6195 9836 4.313707 TTGGGCATGGTGGGTGGG 62.314 66.667 0.00 0.00 0.00 4.61
6198 9839 3.991318 GGCATGGTGGGTGGGGAA 61.991 66.667 0.00 0.00 0.00 3.97
6199 9840 2.119391 GCATGGTGGGTGGGGAAA 59.881 61.111 0.00 0.00 0.00 3.13
6200 9841 1.535202 GCATGGTGGGTGGGGAAAA 60.535 57.895 0.00 0.00 0.00 2.29
6201 9842 1.543944 GCATGGTGGGTGGGGAAAAG 61.544 60.000 0.00 0.00 0.00 2.27
6202 9843 0.904394 CATGGTGGGTGGGGAAAAGG 60.904 60.000 0.00 0.00 0.00 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
119 120 2.423947 GCCAAATGGAGGATCTGGACAT 60.424 50.000 2.98 0.00 37.39 3.06
192 193 8.147058 AGCCAAATATAAGTGTCTACAGATCAG 58.853 37.037 0.00 0.00 0.00 2.90
322 335 6.087423 CGTCTCTCGTCATGAATTATGTCATC 59.913 42.308 0.00 0.00 38.01 2.92
323 336 5.917447 CGTCTCTCGTCATGAATTATGTCAT 59.083 40.000 0.00 0.00 38.01 3.06
324 337 5.273944 CGTCTCTCGTCATGAATTATGTCA 58.726 41.667 0.00 0.00 38.01 3.58
325 338 5.797909 CGTCTCTCGTCATGAATTATGTC 57.202 43.478 0.00 0.00 38.01 3.06
474 487 1.203013 TCTTCTTCCGTCCCTCTCACA 60.203 52.381 0.00 0.00 0.00 3.58
484 497 2.574399 GCCGCTCTCTTCTTCCGT 59.426 61.111 0.00 0.00 0.00 4.69
489 502 0.975040 AGTCATGGCCGCTCTCTTCT 60.975 55.000 0.00 0.00 0.00 2.85
506 519 1.896122 GATTCCCCCAACGACCGAGT 61.896 60.000 0.00 0.00 0.00 4.18
513 526 2.172717 AGATACAAGGATTCCCCCAACG 59.827 50.000 0.00 0.00 34.66 4.10
516 529 4.295905 ACTAGATACAAGGATTCCCCCA 57.704 45.455 0.00 0.00 34.66 4.96
517 530 5.248705 CCTTACTAGATACAAGGATTCCCCC 59.751 48.000 0.00 0.00 41.18 5.40
525 538 4.142790 TCTCGCCCTTACTAGATACAAGG 58.857 47.826 0.00 3.66 38.86 3.61
535 548 2.762234 CGTCGCTCTCGCCCTTACT 61.762 63.158 0.00 0.00 35.26 2.24
595 608 3.703127 GACCCTTTCTCCCGCCGT 61.703 66.667 0.00 0.00 0.00 5.68
605 618 3.297134 TTGCTTCTTCACAGACCCTTT 57.703 42.857 0.00 0.00 0.00 3.11
607 620 2.487986 CCTTTGCTTCTTCACAGACCCT 60.488 50.000 0.00 0.00 0.00 4.34
612 625 1.882623 GACCCCTTTGCTTCTTCACAG 59.117 52.381 0.00 0.00 0.00 3.66
613 626 1.214175 TGACCCCTTTGCTTCTTCACA 59.786 47.619 0.00 0.00 0.00 3.58
614 627 1.609072 GTGACCCCTTTGCTTCTTCAC 59.391 52.381 0.00 0.00 0.00 3.18
630 643 4.043073 AGAGTTCGAGAAAGAAACGTGAC 58.957 43.478 0.00 0.00 0.00 3.67
631 644 4.303086 AGAGTTCGAGAAAGAAACGTGA 57.697 40.909 0.00 0.00 0.00 4.35
632 645 6.345569 GTTTAGAGTTCGAGAAAGAAACGTG 58.654 40.000 0.00 0.00 0.00 4.49
644 657 1.201647 CCTCCTGCGTTTAGAGTTCGA 59.798 52.381 0.00 0.00 0.00 3.71
696 709 1.446366 GGATACGGCTTCCACCTCC 59.554 63.158 0.00 0.00 33.21 4.30
721 734 0.099968 CATCGCGTAAGAAGGACGGA 59.900 55.000 5.77 0.00 40.66 4.69
769 783 4.527583 GGAGGAGCAGAGCCGCTG 62.528 72.222 0.00 0.00 44.01 5.18
773 790 3.160748 GAGGGGAGGAGCAGAGCC 61.161 72.222 0.00 0.00 0.00 4.70
775 792 1.457455 GAGGAGGGGAGGAGCAGAG 60.457 68.421 0.00 0.00 0.00 3.35
797 814 3.827898 GTCGAGACTGGCGGGGAG 61.828 72.222 0.00 0.00 0.00 4.30
798 815 4.671590 TGTCGAGACTGGCGGGGA 62.672 66.667 4.78 0.00 0.00 4.81
800 817 3.343788 GACTGTCGAGACTGGCGGG 62.344 68.421 13.31 0.00 35.00 6.13
801 818 2.179517 GACTGTCGAGACTGGCGG 59.820 66.667 13.31 0.00 35.00 6.13
802 819 1.442857 GTGACTGTCGAGACTGGCG 60.443 63.158 13.31 0.00 40.68 5.69
803 820 1.080434 GGTGACTGTCGAGACTGGC 60.080 63.158 13.31 11.16 38.58 4.85
804 821 1.210413 CGGTGACTGTCGAGACTGG 59.790 63.158 13.31 5.47 35.00 4.00
805 822 1.442857 GCGGTGACTGTCGAGACTG 60.443 63.158 2.98 8.29 36.50 3.51
806 823 2.627737 GGCGGTGACTGTCGAGACT 61.628 63.158 2.98 0.00 0.00 3.24
807 824 2.126424 GGCGGTGACTGTCGAGAC 60.126 66.667 2.98 0.00 0.00 3.36
808 825 3.733960 CGGCGGTGACTGTCGAGA 61.734 66.667 13.98 0.00 34.72 4.04
809 826 4.778415 CCGGCGGTGACTGTCGAG 62.778 72.222 21.22 6.24 34.72 4.04
1100 1477 2.361737 GGAGGAGGGGTTGCAAGC 60.362 66.667 20.26 20.26 0.00 4.01
1117 1494 3.601685 GCGTGTGGTTGTTGGGGG 61.602 66.667 0.00 0.00 0.00 5.40
1120 1497 2.410687 TGGTGCGTGTGGTTGTTGG 61.411 57.895 0.00 0.00 0.00 3.77
1121 1498 1.226547 GTGGTGCGTGTGGTTGTTG 60.227 57.895 0.00 0.00 0.00 3.33
1122 1499 0.107606 TAGTGGTGCGTGTGGTTGTT 60.108 50.000 0.00 0.00 0.00 2.83
1124 1501 1.196808 GATTAGTGGTGCGTGTGGTTG 59.803 52.381 0.00 0.00 0.00 3.77
1125 1502 1.519408 GATTAGTGGTGCGTGTGGTT 58.481 50.000 0.00 0.00 0.00 3.67
1126 1503 0.669318 CGATTAGTGGTGCGTGTGGT 60.669 55.000 0.00 0.00 0.00 4.16
1127 1504 0.389296 TCGATTAGTGGTGCGTGTGG 60.389 55.000 0.00 0.00 0.00 4.17
1128 1505 1.640428 ATCGATTAGTGGTGCGTGTG 58.360 50.000 0.00 0.00 0.00 3.82
1129 1506 1.999735 CAATCGATTAGTGGTGCGTGT 59.000 47.619 10.97 0.00 0.00 4.49
1133 1510 0.316196 GCGCAATCGATTAGTGGTGC 60.316 55.000 10.97 12.64 38.10 5.01
1166 1932 3.311110 GACAGGGAGTCCGCCACA 61.311 66.667 2.26 0.00 41.56 4.17
1240 2006 4.984161 GCAGAGAGATGAAAGCTGATAGTC 59.016 45.833 0.00 0.00 22.26 2.59
1258 2026 3.810310 AACTCTAAATCCTCCGCAGAG 57.190 47.619 0.00 0.00 38.92 3.35
1299 2067 7.711772 CACATTGTGGGCATATGAATACAATTT 59.288 33.333 20.08 15.05 36.83 1.82
1303 2071 5.771153 CACATTGTGGGCATATGAATACA 57.229 39.130 6.97 4.66 0.00 2.29
1420 2188 0.610687 GTTCTGGGGACACTCTCAGG 59.389 60.000 0.00 0.00 35.60 3.86
1549 2318 6.377327 TTTCTCTTTGGACAAGACACATTC 57.623 37.500 0.00 0.00 0.00 2.67
1569 2338 8.175069 GGTTTTCTTTTTGAACATGAGGTTTTC 58.825 33.333 0.00 0.00 40.63 2.29
1614 2384 8.900781 AGAATCTTTTGACCATATCAATCACAG 58.099 33.333 0.00 0.00 46.80 3.66
1705 2475 5.261216 AGTATAAAATCCCACACAACCCTG 58.739 41.667 0.00 0.00 0.00 4.45
1767 2537 4.403113 TGCAACCGAGTTACATAGATACCA 59.597 41.667 0.00 0.00 0.00 3.25
1786 2556 3.129502 GGAGCAGCTCGCATGCAA 61.130 61.111 19.57 0.00 46.31 4.08
1797 2567 3.655810 GACACAGGCGAGGGAGCAG 62.656 68.421 0.00 0.00 39.27 4.24
1874 2644 6.039382 GCAAACGGAATTATCTTAATCCACCT 59.961 38.462 0.00 0.00 32.08 4.00
1936 2706 7.040548 TGCTGTCATTATTTTGTGATCAGTTGA 60.041 33.333 0.00 0.00 31.81 3.18
1939 2709 6.207221 TGTGCTGTCATTATTTTGTGATCAGT 59.793 34.615 0.00 0.00 31.81 3.41
1947 2718 6.696583 TGTTGAACTGTGCTGTCATTATTTTG 59.303 34.615 0.00 0.00 0.00 2.44
1956 2727 1.331756 CTGGTGTTGAACTGTGCTGTC 59.668 52.381 0.00 0.00 0.00 3.51
1964 2735 2.128771 AAGTGTGCTGGTGTTGAACT 57.871 45.000 0.00 0.00 0.00 3.01
1965 2736 3.058224 GGATAAGTGTGCTGGTGTTGAAC 60.058 47.826 0.00 0.00 0.00 3.18
1966 2737 3.146066 GGATAAGTGTGCTGGTGTTGAA 58.854 45.455 0.00 0.00 0.00 2.69
1967 2738 2.371841 AGGATAAGTGTGCTGGTGTTGA 59.628 45.455 0.00 0.00 0.00 3.18
1968 2739 2.783135 AGGATAAGTGTGCTGGTGTTG 58.217 47.619 0.00 0.00 0.00 3.33
1969 2740 3.508845 AAGGATAAGTGTGCTGGTGTT 57.491 42.857 0.00 0.00 0.00 3.32
2096 2868 3.657634 TGCACAGAGAGAGACAATTGTC 58.342 45.455 27.69 27.69 45.08 3.18
2097 2869 3.758755 TGCACAGAGAGAGACAATTGT 57.241 42.857 11.78 11.78 0.00 2.71
2098 2870 4.251268 TCATGCACAGAGAGAGACAATTG 58.749 43.478 3.24 3.24 0.00 2.32
2099 2871 4.548451 TCATGCACAGAGAGAGACAATT 57.452 40.909 0.00 0.00 0.00 2.32
2100 2872 4.757019 ATCATGCACAGAGAGAGACAAT 57.243 40.909 0.00 0.00 0.00 2.71
2101 2873 4.548451 AATCATGCACAGAGAGAGACAA 57.452 40.909 0.00 0.00 0.00 3.18
2128 2900 8.409358 AAATGGAGCAAGTATGTTAGAAAAGT 57.591 30.769 0.00 0.00 0.00 2.66
2154 2926 5.290493 TGAGAGAACAGACTAAAGCCAAA 57.710 39.130 0.00 0.00 0.00 3.28
2167 2939 8.299570 GCTTCAGGATTTAATTTTGAGAGAACA 58.700 33.333 0.00 0.00 0.00 3.18
2171 2943 6.750963 GCAGCTTCAGGATTTAATTTTGAGAG 59.249 38.462 0.00 0.00 0.00 3.20
2178 2950 6.847421 AAAGAGCAGCTTCAGGATTTAATT 57.153 33.333 0.00 0.00 35.24 1.40
2189 2961 7.436673 TCGAGAATATTCTAAAAGAGCAGCTTC 59.563 37.037 17.94 0.37 37.73 3.86
2193 2965 8.641499 AACTCGAGAATATTCTAAAAGAGCAG 57.359 34.615 21.68 13.68 37.73 4.24
2446 3218 1.754226 TGCACCTCAAAAACCAGGAAC 59.246 47.619 0.00 0.00 33.52 3.62
2473 3245 2.418368 AACTGAAACAGGCACTCACA 57.582 45.000 0.00 0.00 34.60 3.58
2525 3297 9.247861 AGAAAATCAGCAGTTATTATGGACTTT 57.752 29.630 0.00 0.00 0.00 2.66
2818 5769 4.288105 AGAAGAGGTGACACCAGATTTCAT 59.712 41.667 26.30 7.77 41.95 2.57
2850 5801 3.033659 CTAGAACCTCTAGGGAAGGCA 57.966 52.381 0.20 0.00 42.05 4.75
2971 5922 5.912149 AACCTCCAATAGATGCCATTCTA 57.088 39.130 0.00 0.00 32.94 2.10
2988 5939 9.620259 AAGAGAGATAAAATCAATGGTAACCTC 57.380 33.333 0.00 0.00 0.00 3.85
3074 6025 1.888512 GTTCTTTGCTGCCCAATCTGA 59.111 47.619 0.00 0.00 32.49 3.27
3156 6107 9.562583 TCAACAGTTTGTAAATTCAAGTAACAC 57.437 29.630 0.00 0.00 34.02 3.32
3364 6316 2.035576 GCGTCGTATAGGAGTTCCCAAT 59.964 50.000 0.00 0.00 37.41 3.16
3521 6474 4.819630 AGTGAAAAGTTCCATCGCTAACAA 59.180 37.500 0.00 0.00 32.48 2.83
3693 6648 9.733556 TTTCACAACTTAGGAATTATGCTTAGA 57.266 29.630 0.00 0.00 29.48 2.10
3722 6677 6.093219 AGGAATTATGCATATCATTGCTCGTC 59.907 38.462 15.57 0.30 43.18 4.20
3744 6699 9.832445 GATTTCATGGAATACTACAACTTAGGA 57.168 33.333 0.00 0.00 0.00 2.94
3748 6703 9.331282 GCTAGATTTCATGGAATACTACAACTT 57.669 33.333 0.00 0.00 0.00 2.66
3750 6705 7.438459 ACGCTAGATTTCATGGAATACTACAAC 59.562 37.037 0.00 0.00 0.00 3.32
3751 6706 7.438160 CACGCTAGATTTCATGGAATACTACAA 59.562 37.037 0.00 0.00 0.00 2.41
3753 6708 6.128795 GCACGCTAGATTTCATGGAATACTAC 60.129 42.308 0.00 0.00 0.00 2.73
3754 6709 5.926542 GCACGCTAGATTTCATGGAATACTA 59.073 40.000 0.00 3.01 0.00 1.82
3755 6710 4.752101 GCACGCTAGATTTCATGGAATACT 59.248 41.667 0.00 1.97 0.00 2.12
3757 6712 4.960938 AGCACGCTAGATTTCATGGAATA 58.039 39.130 0.00 0.00 0.00 1.75
3758 6713 3.813443 AGCACGCTAGATTTCATGGAAT 58.187 40.909 0.00 0.00 0.00 3.01
3773 6781 1.398041 TCACAAGCATGATAAGCACGC 59.602 47.619 0.00 0.00 35.56 5.34
3804 6812 6.240549 ACACCCTTATGAAGTCAGGAATAG 57.759 41.667 0.00 0.00 0.00 1.73
3822 6830 9.463443 GCATTCAAAATAACTTCATATACACCC 57.537 33.333 0.00 0.00 0.00 4.61
4281 7336 4.708726 ACTGAAAGAATGCAGTAATGCC 57.291 40.909 13.34 0.00 43.10 4.40
4282 7337 5.702865 TGAACTGAAAGAATGCAGTAATGC 58.297 37.500 8.51 8.51 44.06 3.56
4308 7365 7.786178 TTCAGGAATGTACACAATAGCATAC 57.214 36.000 0.00 0.00 0.00 2.39
4436 7494 5.064452 CACATGAAGTCAAGAGTAGAATGGC 59.936 44.000 0.00 0.00 0.00 4.40
4509 7567 4.155099 TGTGGTTACTTTGCAATATCACCG 59.845 41.667 0.00 0.00 0.00 4.94
4570 7630 8.037382 TGAAAGCAATTTGAATTCACAAAACA 57.963 26.923 7.89 0.00 41.88 2.83
4586 7646 7.285566 TCCAAGCTAGATAAGATGAAAGCAAT 58.714 34.615 0.00 0.00 32.42 3.56
4641 7707 4.391155 TGCTACGGTTCAACCTTACAAAT 58.609 39.130 4.68 0.00 35.66 2.32
4652 7718 0.759959 TTCTGGGTTGCTACGGTTCA 59.240 50.000 0.00 0.00 0.00 3.18
4657 7723 3.126343 GGTTGTATTTCTGGGTTGCTACG 59.874 47.826 0.00 0.00 0.00 3.51
4687 7753 0.038021 TTAGTGCATGGAAGCCAGCA 59.962 50.000 0.00 0.00 36.75 4.41
4707 7773 6.855836 TGGATGAAGCAGTTAAAAGCATAAG 58.144 36.000 3.57 0.00 0.00 1.73
4764 7833 4.074526 TGCCAGACGCTCTCCTGC 62.075 66.667 0.00 0.00 38.78 4.85
4782 7851 8.081633 TGTTTCATTACCATCTTTGAATGACAC 58.918 33.333 6.02 6.02 37.88 3.67
4835 7904 4.963318 AACAAGTGGAGATCTTCTCACA 57.037 40.909 19.71 4.87 45.12 3.58
4934 8003 2.368655 TCAGACCATGTGTGTCATCG 57.631 50.000 3.83 0.00 35.15 3.84
4970 8039 3.551863 CCTCTGATGAATCCACTAGACGC 60.552 52.174 0.00 0.00 0.00 5.19
5266 8500 4.734108 GCCCGTCATCTCTAAAGAGTACAC 60.734 50.000 6.87 0.00 42.60 2.90
5308 8543 5.852282 AACAAACCAAGAAAGTGCTATGT 57.148 34.783 0.00 0.00 0.00 2.29
5359 8596 4.308899 AGACAGCCGATATACAAGACAC 57.691 45.455 0.00 0.00 0.00 3.67
5403 8640 2.509336 CTCTAAGCACCGCCACCG 60.509 66.667 0.00 0.00 0.00 4.94
5433 8670 4.357097 AGTTTGGAGAGGGTTTAAGGGATT 59.643 41.667 0.00 0.00 0.00 3.01
5440 8677 5.104277 TGAGTGAAAGTTTGGAGAGGGTTTA 60.104 40.000 0.00 0.00 0.00 2.01
5470 8707 2.830923 CAGGGTGGCAATTTTATGACCA 59.169 45.455 0.00 0.00 0.00 4.02
5538 8775 5.128663 GCTCCACATATTGGTTGGGTTTAAT 59.871 40.000 4.51 0.00 46.97 1.40
5560 8797 0.609131 CCAGACAACCCAAATCCGCT 60.609 55.000 0.00 0.00 0.00 5.52
5572 8809 2.350895 CCGGGCACATCCAGACAA 59.649 61.111 0.00 0.00 36.21 3.18
5602 8840 1.439353 CCAATCTGGCGGATCCAACG 61.439 60.000 13.41 0.00 46.01 4.10
5605 8843 1.526887 GTCCAATCTGGCGGATCCA 59.473 57.895 13.41 0.00 44.18 3.41
5606 8844 1.227973 GGTCCAATCTGGCGGATCC 60.228 63.158 9.72 0.00 37.47 3.36
5612 8850 1.141053 AGGTAATCGGTCCAATCTGGC 59.859 52.381 0.00 0.00 37.47 4.85
5613 8851 3.118408 TGAAGGTAATCGGTCCAATCTGG 60.118 47.826 0.00 0.00 39.43 3.86
5625 8863 9.761504 GACTAGTAAACCCTAATGAAGGTAATC 57.238 37.037 0.00 0.00 44.90 1.75
5632 8870 4.406649 CGGGGACTAGTAAACCCTAATGAA 59.593 45.833 21.17 0.00 42.86 2.57
5633 8871 3.962718 CGGGGACTAGTAAACCCTAATGA 59.037 47.826 21.17 0.00 42.86 2.57
5635 8873 3.999603 ACGGGGACTAGTAAACCCTAAT 58.000 45.455 21.17 9.08 42.86 1.73
5638 8876 3.695357 ATACGGGGACTAGTAAACCCT 57.305 47.619 21.17 13.60 42.86 4.34
5792 9433 2.203640 AGCGTCACCACCTCTCCA 60.204 61.111 0.00 0.00 0.00 3.86
5793 9434 2.262915 CAGCGTCACCACCTCTCC 59.737 66.667 0.00 0.00 0.00 3.71
5798 9439 3.537206 AAGAGCCAGCGTCACCACC 62.537 63.158 0.00 0.00 0.00 4.61
5803 9444 1.669115 GAAGCAAGAGCCAGCGTCA 60.669 57.895 0.00 0.00 43.56 4.35
5825 9466 2.893398 GAGCCACCCTCACTACCG 59.107 66.667 0.00 0.00 40.45 4.02
5846 9487 1.661480 CCCACCACAAGCACACATG 59.339 57.895 0.00 0.00 0.00 3.21
5850 9491 4.912395 GGCCCCACCACAAGCACA 62.912 66.667 0.00 0.00 38.86 4.57
5869 9510 4.722700 ATGGTCCAGCGCCACCAC 62.723 66.667 22.05 6.71 45.61 4.16
5870 9511 4.720902 CATGGTCCAGCGCCACCA 62.721 66.667 21.90 21.90 46.84 4.17
5871 9512 4.722700 ACATGGTCCAGCGCCACC 62.723 66.667 2.29 9.01 39.03 4.61
5872 9513 2.672996 AACATGGTCCAGCGCCAC 60.673 61.111 2.29 0.00 39.03 5.01
5873 9514 2.359850 GAACATGGTCCAGCGCCA 60.360 61.111 2.29 0.00 40.68 5.69
5874 9515 3.134127 GGAACATGGTCCAGCGCC 61.134 66.667 25.47 0.00 37.65 6.53
5875 9516 3.134127 GGGAACATGGTCCAGCGC 61.134 66.667 30.61 10.09 39.70 5.92
5876 9517 1.746615 CTGGGAACATGGTCCAGCG 60.747 63.158 30.61 14.25 41.12 5.18
5877 9518 0.393537 CTCTGGGAACATGGTCCAGC 60.394 60.000 30.61 15.20 45.58 4.85
5878 9519 0.393537 GCTCTGGGAACATGGTCCAG 60.394 60.000 30.61 23.49 46.91 3.86
5879 9520 1.685224 GCTCTGGGAACATGGTCCA 59.315 57.895 30.61 15.78 41.51 4.02
5880 9521 1.450312 CGCTCTGGGAACATGGTCC 60.450 63.158 22.46 22.46 41.51 4.46
5881 9522 0.179000 ATCGCTCTGGGAACATGGTC 59.821 55.000 0.73 0.73 41.51 4.02
5882 9523 0.179000 GATCGCTCTGGGAACATGGT 59.821 55.000 0.00 0.00 41.51 3.55
5883 9524 0.877649 CGATCGCTCTGGGAACATGG 60.878 60.000 0.26 0.00 41.51 3.66
5884 9525 1.493950 GCGATCGCTCTGGGAACATG 61.494 60.000 31.94 0.00 37.75 3.21
5885 9526 1.227380 GCGATCGCTCTGGGAACAT 60.227 57.895 31.94 0.00 37.75 2.71
5886 9527 2.184322 GCGATCGCTCTGGGAACA 59.816 61.111 31.94 0.00 38.26 3.18
5904 9545 3.020274 AGCAGATAGAGCTTCTGACGAA 58.980 45.455 16.44 0.00 42.63 3.85
5905 9546 2.357323 CAGCAGATAGAGCTTCTGACGA 59.643 50.000 16.44 0.00 42.63 4.20
5906 9547 2.730069 CAGCAGATAGAGCTTCTGACG 58.270 52.381 16.44 3.92 42.63 4.35
5907 9548 2.159128 TGCAGCAGATAGAGCTTCTGAC 60.159 50.000 16.44 8.57 42.63 3.51
5908 9549 2.105766 TGCAGCAGATAGAGCTTCTGA 58.894 47.619 16.44 0.00 42.63 3.27
5909 9550 2.598686 TGCAGCAGATAGAGCTTCTG 57.401 50.000 9.19 9.19 41.14 3.02
5910 9551 2.765135 TCTTGCAGCAGATAGAGCTTCT 59.235 45.455 0.00 0.00 41.14 2.85
5911 9552 3.176552 TCTTGCAGCAGATAGAGCTTC 57.823 47.619 0.00 0.00 41.14 3.86
5912 9553 3.055240 AGTTCTTGCAGCAGATAGAGCTT 60.055 43.478 6.20 0.00 41.14 3.74
5913 9554 2.500910 AGTTCTTGCAGCAGATAGAGCT 59.499 45.455 6.20 6.20 44.62 4.09
5914 9555 2.865551 GAGTTCTTGCAGCAGATAGAGC 59.134 50.000 0.00 0.00 0.00 4.09
5915 9556 4.389890 AGAGTTCTTGCAGCAGATAGAG 57.610 45.455 0.00 0.00 0.00 2.43
5916 9557 4.465660 AGAAGAGTTCTTGCAGCAGATAGA 59.534 41.667 0.00 0.00 36.36 1.98
5917 9558 4.757594 AGAAGAGTTCTTGCAGCAGATAG 58.242 43.478 0.00 0.00 36.36 2.08
5918 9559 4.382470 GGAGAAGAGTTCTTGCAGCAGATA 60.382 45.833 0.00 0.00 40.87 1.98
5919 9560 3.598299 GAGAAGAGTTCTTGCAGCAGAT 58.402 45.455 0.00 0.00 40.87 2.90
5920 9561 2.289320 GGAGAAGAGTTCTTGCAGCAGA 60.289 50.000 0.00 0.00 40.87 4.26
5921 9562 2.075338 GGAGAAGAGTTCTTGCAGCAG 58.925 52.381 0.00 0.00 40.87 4.24
5922 9563 1.696336 AGGAGAAGAGTTCTTGCAGCA 59.304 47.619 0.00 0.00 40.87 4.41
5923 9564 2.470983 AGGAGAAGAGTTCTTGCAGC 57.529 50.000 0.00 0.00 40.87 5.25
5924 9565 3.737850 ACAAGGAGAAGAGTTCTTGCAG 58.262 45.455 0.00 0.00 40.87 4.41
5925 9566 3.845781 ACAAGGAGAAGAGTTCTTGCA 57.154 42.857 0.00 0.00 40.87 4.08
5926 9567 5.121454 CACATACAAGGAGAAGAGTTCTTGC 59.879 44.000 0.00 0.00 40.87 4.01
5927 9568 5.641209 CCACATACAAGGAGAAGAGTTCTTG 59.359 44.000 0.00 0.00 40.87 3.02
5928 9569 5.308237 ACCACATACAAGGAGAAGAGTTCTT 59.692 40.000 0.00 0.00 40.87 2.52
5929 9570 4.841246 ACCACATACAAGGAGAAGAGTTCT 59.159 41.667 0.00 0.00 44.21 3.01
5930 9571 5.153950 ACCACATACAAGGAGAAGAGTTC 57.846 43.478 0.00 0.00 0.00 3.01
5931 9572 5.308825 CAACCACATACAAGGAGAAGAGTT 58.691 41.667 0.00 0.00 0.00 3.01
5932 9573 4.804261 GCAACCACATACAAGGAGAAGAGT 60.804 45.833 0.00 0.00 0.00 3.24
5933 9574 3.686726 GCAACCACATACAAGGAGAAGAG 59.313 47.826 0.00 0.00 0.00 2.85
5934 9575 3.674997 GCAACCACATACAAGGAGAAGA 58.325 45.455 0.00 0.00 0.00 2.87
5935 9576 2.416547 CGCAACCACATACAAGGAGAAG 59.583 50.000 0.00 0.00 0.00 2.85
5936 9577 2.422597 CGCAACCACATACAAGGAGAA 58.577 47.619 0.00 0.00 0.00 2.87
5937 9578 1.338674 CCGCAACCACATACAAGGAGA 60.339 52.381 0.00 0.00 0.00 3.71
5938 9579 1.086696 CCGCAACCACATACAAGGAG 58.913 55.000 0.00 0.00 0.00 3.69
5939 9580 0.958382 GCCGCAACCACATACAAGGA 60.958 55.000 0.00 0.00 0.00 3.36
5940 9581 1.506262 GCCGCAACCACATACAAGG 59.494 57.895 0.00 0.00 0.00 3.61
5941 9582 0.960364 AGGCCGCAACCACATACAAG 60.960 55.000 0.00 0.00 0.00 3.16
5942 9583 0.538516 AAGGCCGCAACCACATACAA 60.539 50.000 0.00 0.00 0.00 2.41
5943 9584 0.958382 GAAGGCCGCAACCACATACA 60.958 55.000 0.00 0.00 0.00 2.29
5944 9585 0.958382 TGAAGGCCGCAACCACATAC 60.958 55.000 0.00 0.00 0.00 2.39
5945 9586 0.250945 TTGAAGGCCGCAACCACATA 60.251 50.000 9.63 0.00 0.00 2.29
5946 9587 1.526575 CTTGAAGGCCGCAACCACAT 61.527 55.000 9.63 0.00 0.00 3.21
5947 9588 2.124109 TTGAAGGCCGCAACCACA 60.124 55.556 9.63 0.00 0.00 4.17
5948 9589 1.856265 CTCTTGAAGGCCGCAACCAC 61.856 60.000 9.63 0.00 0.00 4.16
5949 9590 1.600636 CTCTTGAAGGCCGCAACCA 60.601 57.895 9.63 0.00 0.00 3.67
5950 9591 2.335712 CCTCTTGAAGGCCGCAACC 61.336 63.158 9.63 0.00 38.67 3.77
5951 9592 1.301677 CTCCTCTTGAAGGCCGCAAC 61.302 60.000 9.63 0.00 45.78 4.17
5952 9593 1.003355 CTCCTCTTGAAGGCCGCAA 60.003 57.895 12.56 12.56 45.78 4.85
5953 9594 2.665000 CTCCTCTTGAAGGCCGCA 59.335 61.111 0.00 0.00 45.78 5.69
5954 9595 2.124942 CCTCCTCTTGAAGGCCGC 60.125 66.667 0.00 0.00 45.78 6.53
5955 9596 2.124942 GCCTCCTCTTGAAGGCCG 60.125 66.667 0.00 0.00 45.78 6.13
5956 9597 2.124942 CGCCTCCTCTTGAAGGCC 60.125 66.667 7.75 0.00 45.78 5.19
5957 9598 2.821810 GCGCCTCCTCTTGAAGGC 60.822 66.667 0.00 3.28 45.78 4.35
5959 9600 1.807573 GTCGCGCCTCCTCTTGAAG 60.808 63.158 0.00 0.00 0.00 3.02
5960 9601 2.261671 GTCGCGCCTCCTCTTGAA 59.738 61.111 0.00 0.00 0.00 2.69
5961 9602 2.676822 AGTCGCGCCTCCTCTTGA 60.677 61.111 0.00 0.00 0.00 3.02
5962 9603 2.507992 CAGTCGCGCCTCCTCTTG 60.508 66.667 0.00 0.00 0.00 3.02
5963 9604 4.443266 GCAGTCGCGCCTCCTCTT 62.443 66.667 0.00 0.00 0.00 2.85
5970 9611 4.824166 CATTGCAGCAGTCGCGCC 62.824 66.667 0.00 0.00 45.49 6.53
5971 9612 3.792047 TCATTGCAGCAGTCGCGC 61.792 61.111 0.00 0.00 45.49 6.86
5972 9613 2.097160 GTCATTGCAGCAGTCGCG 59.903 61.111 0.00 0.00 45.49 5.87
5973 9614 2.097160 CGTCATTGCAGCAGTCGC 59.903 61.111 0.00 0.00 38.99 5.19
5974 9615 1.904852 AAGCGTCATTGCAGCAGTCG 61.905 55.000 0.00 0.88 37.31 4.18
5975 9616 0.453950 CAAGCGTCATTGCAGCAGTC 60.454 55.000 0.00 0.00 37.31 3.51
5976 9617 1.577922 CAAGCGTCATTGCAGCAGT 59.422 52.632 0.00 0.00 37.31 4.40
5977 9618 1.154093 CCAAGCGTCATTGCAGCAG 60.154 57.895 0.00 0.00 37.31 4.24
5978 9619 1.454572 AACCAAGCGTCATTGCAGCA 61.455 50.000 0.00 0.00 37.31 4.41
5979 9620 0.730494 GAACCAAGCGTCATTGCAGC 60.730 55.000 0.00 0.00 37.31 5.25
5980 9621 0.877071 AGAACCAAGCGTCATTGCAG 59.123 50.000 0.00 0.00 37.31 4.41
5981 9622 0.874390 GAGAACCAAGCGTCATTGCA 59.126 50.000 0.00 0.00 37.31 4.08
5982 9623 0.874390 TGAGAACCAAGCGTCATTGC 59.126 50.000 0.00 0.00 0.00 3.56
5983 9624 2.743664 TGATGAGAACCAAGCGTCATTG 59.256 45.455 0.00 0.00 29.66 2.82
5984 9625 3.057969 TGATGAGAACCAAGCGTCATT 57.942 42.857 0.00 0.00 29.66 2.57
5985 9626 2.768253 TGATGAGAACCAAGCGTCAT 57.232 45.000 0.00 0.00 32.24 3.06
5986 9627 2.743664 CAATGATGAGAACCAAGCGTCA 59.256 45.455 0.00 0.00 32.69 4.35
5987 9628 2.096496 CCAATGATGAGAACCAAGCGTC 59.904 50.000 0.00 0.00 0.00 5.19
5988 9629 2.086869 CCAATGATGAGAACCAAGCGT 58.913 47.619 0.00 0.00 0.00 5.07
5989 9630 2.353889 CTCCAATGATGAGAACCAAGCG 59.646 50.000 0.00 0.00 31.26 4.68
5990 9631 2.686915 CCTCCAATGATGAGAACCAAGC 59.313 50.000 0.00 0.00 31.26 4.01
5991 9632 4.197750 CTCCTCCAATGATGAGAACCAAG 58.802 47.826 0.00 0.00 35.85 3.61
5992 9633 3.054139 CCTCCTCCAATGATGAGAACCAA 60.054 47.826 0.00 0.00 35.85 3.67
5993 9634 2.507058 CCTCCTCCAATGATGAGAACCA 59.493 50.000 0.00 0.00 35.85 3.67
5994 9635 2.774234 TCCTCCTCCAATGATGAGAACC 59.226 50.000 0.00 0.00 35.85 3.62
5995 9636 3.708631 TCTCCTCCTCCAATGATGAGAAC 59.291 47.826 0.00 0.00 35.85 3.01
5996 9637 3.999603 TCTCCTCCTCCAATGATGAGAA 58.000 45.455 0.00 0.00 35.85 2.87
5997 9638 3.695357 TCTCCTCCTCCAATGATGAGA 57.305 47.619 0.00 0.00 35.85 3.27
5998 9639 3.902467 TCATCTCCTCCTCCAATGATGAG 59.098 47.826 0.00 0.00 36.44 2.90
5999 9640 3.645212 GTCATCTCCTCCTCCAATGATGA 59.355 47.826 0.00 0.00 38.22 2.92
6000 9641 3.554544 CGTCATCTCCTCCTCCAATGATG 60.555 52.174 0.00 0.00 34.40 3.07
6001 9642 2.632028 CGTCATCTCCTCCTCCAATGAT 59.368 50.000 0.00 0.00 0.00 2.45
6002 9643 2.034878 CGTCATCTCCTCCTCCAATGA 58.965 52.381 0.00 0.00 0.00 2.57
6003 9644 2.034878 TCGTCATCTCCTCCTCCAATG 58.965 52.381 0.00 0.00 0.00 2.82
6004 9645 2.461300 TCGTCATCTCCTCCTCCAAT 57.539 50.000 0.00 0.00 0.00 3.16
6005 9646 2.311463 GATCGTCATCTCCTCCTCCAA 58.689 52.381 0.00 0.00 0.00 3.53
6006 9647 1.479573 GGATCGTCATCTCCTCCTCCA 60.480 57.143 0.00 0.00 0.00 3.86
6007 9648 1.253100 GGATCGTCATCTCCTCCTCC 58.747 60.000 0.00 0.00 0.00 4.30
6008 9649 1.203001 AGGGATCGTCATCTCCTCCTC 60.203 57.143 0.00 0.00 27.95 3.71
6009 9650 0.856982 AGGGATCGTCATCTCCTCCT 59.143 55.000 0.00 0.00 27.95 3.69
6010 9651 1.342819 CAAGGGATCGTCATCTCCTCC 59.657 57.143 0.00 0.00 31.73 4.30
6011 9652 1.342819 CCAAGGGATCGTCATCTCCTC 59.657 57.143 0.00 0.00 31.73 3.71
6012 9653 1.343478 ACCAAGGGATCGTCATCTCCT 60.343 52.381 0.00 0.00 33.39 3.69
6013 9654 1.069358 GACCAAGGGATCGTCATCTCC 59.931 57.143 0.00 0.00 27.95 3.71
6014 9655 1.269309 CGACCAAGGGATCGTCATCTC 60.269 57.143 0.00 0.00 33.63 2.75
6015 9656 0.747255 CGACCAAGGGATCGTCATCT 59.253 55.000 0.00 0.00 33.63 2.90
6016 9657 0.249489 CCGACCAAGGGATCGTCATC 60.249 60.000 0.00 0.00 36.60 2.92
6017 9658 0.686441 TCCGACCAAGGGATCGTCAT 60.686 55.000 0.00 0.00 36.60 3.06
6018 9659 1.304630 TCCGACCAAGGGATCGTCA 60.305 57.895 0.00 0.00 36.60 4.35
6019 9660 1.035932 TCTCCGACCAAGGGATCGTC 61.036 60.000 0.00 0.00 36.60 4.20
6020 9661 0.613853 TTCTCCGACCAAGGGATCGT 60.614 55.000 0.00 0.00 36.60 3.73
6021 9662 0.103208 CTTCTCCGACCAAGGGATCG 59.897 60.000 0.00 0.00 38.08 3.69
6022 9663 1.410882 CTCTTCTCCGACCAAGGGATC 59.589 57.143 0.00 0.00 31.99 3.36
6023 9664 1.490574 CTCTTCTCCGACCAAGGGAT 58.509 55.000 0.00 0.00 31.99 3.85
6024 9665 1.258445 GCTCTTCTCCGACCAAGGGA 61.258 60.000 0.00 0.00 0.00 4.20
6025 9666 1.219393 GCTCTTCTCCGACCAAGGG 59.781 63.158 0.00 0.00 0.00 3.95
6026 9667 0.174617 GAGCTCTTCTCCGACCAAGG 59.825 60.000 6.43 0.00 35.77 3.61
6027 9668 0.891373 TGAGCTCTTCTCCGACCAAG 59.109 55.000 16.19 0.00 41.18 3.61
6028 9669 1.273606 CTTGAGCTCTTCTCCGACCAA 59.726 52.381 16.19 0.00 41.18 3.67
6029 9670 0.891373 CTTGAGCTCTTCTCCGACCA 59.109 55.000 16.19 0.00 41.18 4.02
6030 9671 0.174617 CCTTGAGCTCTTCTCCGACC 59.825 60.000 16.19 0.00 41.18 4.79
6031 9672 0.174617 CCCTTGAGCTCTTCTCCGAC 59.825 60.000 16.19 0.00 41.18 4.79
6032 9673 1.608717 GCCCTTGAGCTCTTCTCCGA 61.609 60.000 16.19 0.00 41.18 4.55
6033 9674 1.153469 GCCCTTGAGCTCTTCTCCG 60.153 63.158 16.19 0.00 41.18 4.63
6034 9675 1.223211 GGCCCTTGAGCTCTTCTCC 59.777 63.158 16.19 6.10 41.18 3.71
6035 9676 0.617935 AAGGCCCTTGAGCTCTTCTC 59.382 55.000 16.19 0.35 42.23 2.87
6036 9677 0.327591 CAAGGCCCTTGAGCTCTTCT 59.672 55.000 19.04 0.66 43.42 2.85
6037 9678 0.679321 CCAAGGCCCTTGAGCTCTTC 60.679 60.000 25.16 0.00 43.42 2.87
6038 9679 1.136329 TCCAAGGCCCTTGAGCTCTT 61.136 55.000 25.16 0.00 43.42 2.85
6039 9680 1.539869 TCCAAGGCCCTTGAGCTCT 60.540 57.895 25.16 0.00 43.42 4.09
6040 9681 1.077858 CTCCAAGGCCCTTGAGCTC 60.078 63.158 25.16 6.82 43.42 4.09
6041 9682 1.136329 TTCTCCAAGGCCCTTGAGCT 61.136 55.000 25.16 0.00 43.42 4.09
6042 9683 0.962855 GTTCTCCAAGGCCCTTGAGC 60.963 60.000 25.16 3.38 43.42 4.26
6043 9684 0.401738 TGTTCTCCAAGGCCCTTGAG 59.598 55.000 25.16 18.32 43.42 3.02
6044 9685 0.850100 TTGTTCTCCAAGGCCCTTGA 59.150 50.000 25.16 9.92 43.42 3.02
6045 9686 0.961753 GTTGTTCTCCAAGGCCCTTG 59.038 55.000 16.91 16.91 40.75 3.61
6046 9687 0.537371 CGTTGTTCTCCAAGGCCCTT 60.537 55.000 0.00 0.00 32.71 3.95
6047 9688 1.073199 CGTTGTTCTCCAAGGCCCT 59.927 57.895 0.00 0.00 32.71 5.19
6048 9689 1.971695 CCGTTGTTCTCCAAGGCCC 60.972 63.158 0.00 0.00 37.56 5.80
6049 9690 0.035739 TACCGTTGTTCTCCAAGGCC 59.964 55.000 0.00 0.00 37.56 5.19
6050 9691 1.439679 CTACCGTTGTTCTCCAAGGC 58.560 55.000 0.00 0.00 37.56 4.35
6051 9692 1.439679 GCTACCGTTGTTCTCCAAGG 58.560 55.000 0.00 0.00 38.40 3.61
6052 9693 1.068474 CGCTACCGTTGTTCTCCAAG 58.932 55.000 0.00 0.00 32.51 3.61
6053 9694 0.320073 CCGCTACCGTTGTTCTCCAA 60.320 55.000 0.00 0.00 0.00 3.53
6054 9695 1.290955 CCGCTACCGTTGTTCTCCA 59.709 57.895 0.00 0.00 0.00 3.86
6055 9696 1.012486 CACCGCTACCGTTGTTCTCC 61.012 60.000 0.00 0.00 0.00 3.71
6056 9697 1.623973 GCACCGCTACCGTTGTTCTC 61.624 60.000 0.00 0.00 0.00 2.87
6057 9698 1.666872 GCACCGCTACCGTTGTTCT 60.667 57.895 0.00 0.00 0.00 3.01
6058 9699 2.674084 GGCACCGCTACCGTTGTTC 61.674 63.158 0.00 0.00 0.00 3.18
6059 9700 2.667199 GGCACCGCTACCGTTGTT 60.667 61.111 0.00 0.00 0.00 2.83
6060 9701 3.463728 TTGGCACCGCTACCGTTGT 62.464 57.895 0.00 0.00 0.00 3.32
6061 9702 2.666862 TTGGCACCGCTACCGTTG 60.667 61.111 0.00 0.00 0.00 4.10
6062 9703 2.180159 ATCTTGGCACCGCTACCGTT 62.180 55.000 0.00 0.00 0.00 4.44
6063 9704 2.573609 GATCTTGGCACCGCTACCGT 62.574 60.000 0.00 0.00 0.00 4.83
6064 9705 1.883084 GATCTTGGCACCGCTACCG 60.883 63.158 0.00 0.00 0.00 4.02
6065 9706 0.811616 CAGATCTTGGCACCGCTACC 60.812 60.000 0.00 0.00 0.00 3.18
6066 9707 0.175760 TCAGATCTTGGCACCGCTAC 59.824 55.000 0.00 0.00 0.00 3.58
6067 9708 0.901827 TTCAGATCTTGGCACCGCTA 59.098 50.000 0.00 0.00 0.00 4.26
6068 9709 0.674895 GTTCAGATCTTGGCACCGCT 60.675 55.000 0.00 0.00 0.00 5.52
6069 9710 1.796796 GTTCAGATCTTGGCACCGC 59.203 57.895 0.00 0.00 0.00 5.68
6070 9711 0.389817 TCGTTCAGATCTTGGCACCG 60.390 55.000 0.00 0.00 0.00 4.94
6071 9712 1.079503 GTCGTTCAGATCTTGGCACC 58.920 55.000 0.00 0.00 0.00 5.01
6072 9713 0.716108 CGTCGTTCAGATCTTGGCAC 59.284 55.000 0.00 0.00 0.00 5.01
6073 9714 0.389817 CCGTCGTTCAGATCTTGGCA 60.390 55.000 0.00 0.00 0.00 4.92
6074 9715 0.389948 ACCGTCGTTCAGATCTTGGC 60.390 55.000 0.00 0.00 0.00 4.52
6075 9716 1.350193 CACCGTCGTTCAGATCTTGG 58.650 55.000 0.00 0.00 0.00 3.61
6076 9717 0.716108 GCACCGTCGTTCAGATCTTG 59.284 55.000 0.00 0.00 0.00 3.02
6077 9718 0.732880 CGCACCGTCGTTCAGATCTT 60.733 55.000 0.00 0.00 0.00 2.40
6078 9719 1.154016 CGCACCGTCGTTCAGATCT 60.154 57.895 0.00 0.00 0.00 2.75
6079 9720 2.158959 CCGCACCGTCGTTCAGATC 61.159 63.158 0.00 0.00 0.00 2.75
6080 9721 2.126071 CCGCACCGTCGTTCAGAT 60.126 61.111 0.00 0.00 0.00 2.90
6081 9722 3.289062 TCCGCACCGTCGTTCAGA 61.289 61.111 0.00 0.00 0.00 3.27
6082 9723 3.103911 GTCCGCACCGTCGTTCAG 61.104 66.667 0.00 0.00 0.00 3.02
6083 9724 4.651008 GGTCCGCACCGTCGTTCA 62.651 66.667 0.00 0.00 31.06 3.18
6092 9733 3.998672 TCGGTTCCAGGTCCGCAC 61.999 66.667 17.05 0.00 45.44 5.34
6093 9734 3.998672 GTCGGTTCCAGGTCCGCA 61.999 66.667 17.05 7.17 45.44 5.69
6094 9735 3.692406 AGTCGGTTCCAGGTCCGC 61.692 66.667 17.05 13.15 45.44 5.54
6095 9736 2.261671 CAGTCGGTTCCAGGTCCG 59.738 66.667 16.14 16.14 46.93 4.79
6096 9737 2.047179 GCAGTCGGTTCCAGGTCC 60.047 66.667 0.00 0.00 0.00 4.46
6097 9738 2.047179 GGCAGTCGGTTCCAGGTC 60.047 66.667 0.00 0.00 0.00 3.85
6098 9739 3.637273 GGGCAGTCGGTTCCAGGT 61.637 66.667 0.00 0.00 0.00 4.00
6099 9740 4.760047 CGGGCAGTCGGTTCCAGG 62.760 72.222 0.00 0.00 0.00 4.45
6108 9749 3.628646 ATCTTGGTGGCGGGCAGTC 62.629 63.158 3.75 0.88 0.00 3.51
6109 9750 2.713531 AAATCTTGGTGGCGGGCAGT 62.714 55.000 3.75 0.00 0.00 4.40
6110 9751 1.978617 AAATCTTGGTGGCGGGCAG 60.979 57.895 3.75 0.00 0.00 4.85
6111 9752 2.117206 AAATCTTGGTGGCGGGCA 59.883 55.556 0.00 0.00 0.00 5.36
6112 9753 2.573340 CAAATCTTGGTGGCGGGC 59.427 61.111 0.00 0.00 0.00 6.13
6113 9754 3.287445 CCAAATCTTGGTGGCGGG 58.713 61.111 0.00 0.00 45.93 6.13
6121 9762 0.240945 GCACCACCGTCCAAATCTTG 59.759 55.000 0.00 0.00 0.00 3.02
6122 9763 1.234615 CGCACCACCGTCCAAATCTT 61.235 55.000 0.00 0.00 0.00 2.40
6123 9764 1.671054 CGCACCACCGTCCAAATCT 60.671 57.895 0.00 0.00 0.00 2.40
6124 9765 2.686816 CCGCACCACCGTCCAAATC 61.687 63.158 0.00 0.00 0.00 2.17
6125 9766 2.671619 CCGCACCACCGTCCAAAT 60.672 61.111 0.00 0.00 0.00 2.32
6126 9767 3.818121 CTCCGCACCACCGTCCAAA 62.818 63.158 0.00 0.00 0.00 3.28
6127 9768 4.308458 CTCCGCACCACCGTCCAA 62.308 66.667 0.00 0.00 0.00 3.53
6133 9774 4.767255 CTCCAGCTCCGCACCACC 62.767 72.222 0.00 0.00 0.00 4.61
6157 9798 3.747976 ATGGTTCTTTGCGCGGGC 61.748 61.111 18.81 18.81 40.52 6.13
6158 9799 2.179018 CATGGTTCTTTGCGCGGG 59.821 61.111 8.83 0.00 0.00 6.13
6159 9800 1.154225 GTCATGGTTCTTTGCGCGG 60.154 57.895 8.83 0.00 0.00 6.46
6160 9801 0.238289 AAGTCATGGTTCTTTGCGCG 59.762 50.000 0.00 0.00 0.00 6.86
6161 9802 1.666888 CCAAGTCATGGTTCTTTGCGC 60.667 52.381 0.00 0.00 44.85 6.09
6162 9803 2.336554 CCAAGTCATGGTTCTTTGCG 57.663 50.000 0.00 0.00 44.85 4.85
6172 9813 1.324740 CCCACCATGCCCAAGTCATG 61.325 60.000 0.00 0.00 40.60 3.07
6173 9814 1.000739 CCCACCATGCCCAAGTCAT 59.999 57.895 0.00 0.00 0.00 3.06
6174 9815 2.440147 CCCACCATGCCCAAGTCA 59.560 61.111 0.00 0.00 0.00 3.41
6175 9816 1.978617 CACCCACCATGCCCAAGTC 60.979 63.158 0.00 0.00 0.00 3.01
6176 9817 2.118076 CACCCACCATGCCCAAGT 59.882 61.111 0.00 0.00 0.00 3.16
6177 9818 2.681064 CCACCCACCATGCCCAAG 60.681 66.667 0.00 0.00 0.00 3.61
6178 9819 4.313707 CCCACCCACCATGCCCAA 62.314 66.667 0.00 0.00 0.00 4.12
6181 9822 3.537961 TTTCCCCACCCACCATGCC 62.538 63.158 0.00 0.00 0.00 4.40
6182 9823 1.535202 TTTTCCCCACCCACCATGC 60.535 57.895 0.00 0.00 0.00 4.06
6183 9824 0.904394 CCTTTTCCCCACCCACCATG 60.904 60.000 0.00 0.00 0.00 3.66
6184 9825 1.469251 CCTTTTCCCCACCCACCAT 59.531 57.895 0.00 0.00 0.00 3.55
6185 9826 2.939298 CCTTTTCCCCACCCACCA 59.061 61.111 0.00 0.00 0.00 4.17



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.