Multiple sequence alignment - TraesCS5A01G136400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G136400 chr5A 100.000 7558 0 0 1 7558 307703664 307711221 0.000000e+00 13958.0
1 TraesCS5A01G136400 chr5A 87.019 1402 160 7 2856 4243 641398898 641397505 0.000000e+00 1561.0
2 TraesCS5A01G136400 chr5A 97.938 97 1 1 1791 1887 646990209 646990114 4.690000e-37 167.0
3 TraesCS5A01G136400 chr5A 79.310 116 22 2 7227 7341 644918817 644918931 6.290000e-11 80.5
4 TraesCS5A01G136400 chr2D 88.068 1718 142 31 2555 4244 375254408 375252726 0.000000e+00 1978.0
5 TraesCS5A01G136400 chr2D 85.422 1708 182 30 2557 4244 612983507 612985167 0.000000e+00 1712.0
6 TraesCS5A01G136400 chr2D 87.378 1228 102 22 3034 4244 129835271 129836462 0.000000e+00 1360.0
7 TraesCS5A01G136400 chr2D 88.496 1017 85 14 3245 4244 340281389 340280388 0.000000e+00 1201.0
8 TraesCS5A01G136400 chr2D 92.261 659 43 6 1 657 608963478 608964130 0.000000e+00 928.0
9 TraesCS5A01G136400 chr2D 88.834 403 25 10 4620 5008 633460665 633461061 1.910000e-130 477.0
10 TraesCS5A01G136400 chr2D 82.955 440 42 20 4569 4996 305521573 305521155 4.310000e-97 366.0
11 TraesCS5A01G136400 chr2D 82.063 446 40 11 4569 4998 564450473 564450894 2.020000e-90 344.0
12 TraesCS5A01G136400 chr2D 81.455 275 34 11 4264 4531 337397337 337397073 7.680000e-50 209.0
13 TraesCS5A01G136400 chr2D 78.715 249 45 6 7232 7477 336734742 336734499 7.850000e-35 159.0
14 TraesCS5A01G136400 chr2D 95.699 93 4 0 7142 7234 555221188 555221096 4.720000e-32 150.0
15 TraesCS5A01G136400 chr2D 77.818 275 33 18 4264 4531 555162026 555162279 2.200000e-30 145.0
16 TraesCS5A01G136400 chr3D 86.836 1694 169 27 2578 4244 400273211 400271545 0.000000e+00 1844.0
17 TraesCS5A01G136400 chr3D 82.591 1729 167 53 2558 4249 188365183 188363552 0.000000e+00 1402.0
18 TraesCS5A01G136400 chr3D 86.727 987 91 18 3278 4244 398409838 398410804 0.000000e+00 1061.0
19 TraesCS5A01G136400 chr3D 88.121 463 28 13 4569 5010 554072460 554072004 6.720000e-145 525.0
20 TraesCS5A01G136400 chr3D 88.586 403 26 9 3855 4244 492672346 492671951 8.880000e-129 472.0
21 TraesCS5A01G136400 chr3D 82.781 453 44 24 4569 5012 555479288 555478861 2.580000e-99 374.0
22 TraesCS5A01G136400 chr3D 96.774 217 5 1 4792 5006 486151914 486151698 2.000000e-95 361.0
23 TraesCS5A01G136400 chr3D 84.746 177 25 2 7232 7407 587051422 587051597 7.790000e-40 176.0
24 TraesCS5A01G136400 chr3D 95.699 93 3 1 7141 7233 331018050 331017959 1.700000e-31 148.0
25 TraesCS5A01G136400 chr3D 94.737 38 1 1 4494 4530 535391581 535391544 2.950000e-04 58.4
26 TraesCS5A01G136400 chr3D 100.000 28 0 0 5060 5087 388511715 388511688 1.400000e-02 52.8
27 TraesCS5A01G136400 chr7D 86.207 1711 177 24 2555 4241 78426607 78424932 0.000000e+00 1797.0
28 TraesCS5A01G136400 chr7D 85.234 1605 186 26 2594 4175 535735691 535734115 0.000000e+00 1604.0
29 TraesCS5A01G136400 chr7D 92.683 656 41 6 1 655 58542359 58541710 0.000000e+00 939.0
30 TraesCS5A01G136400 chr7D 86.560 439 46 10 4569 4998 318637406 318636972 8.880000e-129 472.0
31 TraesCS5A01G136400 chr7D 82.609 437 46 20 4569 4996 13721419 13721834 7.210000e-95 359.0
32 TraesCS5A01G136400 chr7D 88.356 292 21 5 3966 4244 510481440 510481149 9.390000e-89 339.0
33 TraesCS5A01G136400 chr7D 80.220 273 37 10 4264 4531 203044645 203044385 1.000000e-43 189.0
34 TraesCS5A01G136400 chr7D 93.000 100 5 2 7144 7243 27810500 27810403 2.200000e-30 145.0
35 TraesCS5A01G136400 chr7D 82.635 167 24 5 644 809 124533587 124533425 7.910000e-30 143.0
36 TraesCS5A01G136400 chr7D 91.463 82 6 1 5007 5087 616896732 616896813 2.230000e-20 111.0
37 TraesCS5A01G136400 chr7D 87.500 80 10 0 5007 5086 126463718 126463639 8.070000e-15 93.5
38 TraesCS5A01G136400 chr7D 86.585 82 11 0 5007 5088 633385761 633385842 2.900000e-14 91.6
39 TraesCS5A01G136400 chr1D 86.030 1718 172 37 2555 4244 151431816 151433493 0.000000e+00 1781.0
40 TraesCS5A01G136400 chr1D 85.539 1708 168 34 2555 4244 31284466 31282820 0.000000e+00 1712.0
41 TraesCS5A01G136400 chr1D 85.298 1714 174 36 2554 4244 342165487 342163829 0.000000e+00 1698.0
42 TraesCS5A01G136400 chr1D 85.457 1664 186 24 2605 4244 241008423 241010054 0.000000e+00 1681.0
43 TraesCS5A01G136400 chr1D 86.903 1298 104 27 2964 4244 425532516 425531268 0.000000e+00 1395.0
44 TraesCS5A01G136400 chr1D 84.227 1287 134 27 2984 4244 481680503 481679260 0.000000e+00 1188.0
45 TraesCS5A01G136400 chr1D 86.592 977 93 21 3293 4244 315984345 315985308 0.000000e+00 1044.0
46 TraesCS5A01G136400 chr1D 92.638 652 44 4 1 650 268744065 268743416 0.000000e+00 935.0
47 TraesCS5A01G136400 chr1D 92.638 652 44 4 1 651 307084105 307084753 0.000000e+00 935.0
48 TraesCS5A01G136400 chr1D 85.824 910 84 23 3349 4244 468238725 468237847 0.000000e+00 924.0
49 TraesCS5A01G136400 chr1D 80.698 487 63 23 4529 4995 47850482 47850957 4.340000e-92 350.0
50 TraesCS5A01G136400 chr1D 83.534 249 31 8 644 883 394267051 394267298 2.740000e-54 224.0
51 TraesCS5A01G136400 chr1D 82.510 263 29 12 4275 4531 103682352 103682101 1.650000e-51 215.0
52 TraesCS5A01G136400 chr1D 94.845 97 5 0 7144 7240 12546923 12547019 1.310000e-32 152.0
53 TraesCS5A01G136400 chr1D 95.604 91 4 0 7144 7234 22957722 22957632 6.110000e-31 147.0
54 TraesCS5A01G136400 chr1D 94.624 93 5 0 7142 7234 457943174 457943266 2.200000e-30 145.0
55 TraesCS5A01G136400 chr1D 93.000 100 3 4 7133 7231 348120765 348120861 7.910000e-30 143.0
56 TraesCS5A01G136400 chr1D 75.478 314 55 13 7227 7536 485621868 485621573 4.760000e-27 134.0
57 TraesCS5A01G136400 chr1D 92.500 80 6 0 5007 5086 361208490 361208411 1.720000e-21 115.0
58 TraesCS5A01G136400 chr1D 95.082 61 3 0 4471 4531 393689165 393689225 6.240000e-16 97.1
59 TraesCS5A01G136400 chr1D 86.420 81 11 0 5007 5087 332688532 332688452 1.040000e-13 89.8
60 TraesCS5A01G136400 chr1D 88.889 72 6 2 4936 5006 28977209 28977279 3.760000e-13 87.9
61 TraesCS5A01G136400 chr1D 90.323 62 4 2 4936 4996 394864422 394864362 6.290000e-11 80.5
62 TraesCS5A01G136400 chr6D 86.417 1627 139 34 2645 4243 414469890 414471462 0.000000e+00 1705.0
63 TraesCS5A01G136400 chr6D 83.903 1727 171 46 2552 4244 423799485 423801138 0.000000e+00 1550.0
64 TraesCS5A01G136400 chr6D 84.294 1267 132 21 2995 4244 387107516 387108732 0.000000e+00 1175.0
65 TraesCS5A01G136400 chr6D 87.938 970 88 10 2557 3518 58439585 58438637 0.000000e+00 1116.0
66 TraesCS5A01G136400 chr6D 84.245 1206 121 29 3057 4244 100902806 100901652 0.000000e+00 1110.0
67 TraesCS5A01G136400 chr6D 83.960 1091 115 26 3166 4242 84624769 84623725 0.000000e+00 990.0
68 TraesCS5A01G136400 chr6D 93.189 646 40 3 1 644 211128857 211128214 0.000000e+00 946.0
69 TraesCS5A01G136400 chr6D 87.279 621 57 8 3637 4244 413041172 413041783 0.000000e+00 689.0
70 TraesCS5A01G136400 chr6D 82.878 695 78 15 3573 4244 47379927 47380603 3.040000e-163 586.0
71 TraesCS5A01G136400 chr6D 90.172 407 20 11 4616 5008 24254095 24254495 5.230000e-141 512.0
72 TraesCS5A01G136400 chr6D 87.613 444 25 11 4569 4998 21513723 21513296 8.810000e-134 488.0
73 TraesCS5A01G136400 chr6D 85.331 484 41 15 3778 4244 441647382 441647852 2.470000e-129 473.0
74 TraesCS5A01G136400 chr6D 82.086 441 44 22 4569 4996 248582725 248582307 2.020000e-90 344.0
75 TraesCS5A01G136400 chr6D 87.063 286 23 5 3972 4244 469442196 469441912 2.050000e-80 311.0
76 TraesCS5A01G136400 chr6D 84.615 247 28 7 644 883 431451114 431451357 3.530000e-58 237.0
77 TraesCS5A01G136400 chr6D 84.475 219 29 4 644 861 336219558 336219344 2.140000e-50 211.0
78 TraesCS5A01G136400 chr6D 94.681 94 5 0 7140 7233 30079379 30079472 6.110000e-31 147.0
79 TraesCS5A01G136400 chr6D 94.624 93 5 0 7142 7234 221219314 221219406 2.200000e-30 145.0
80 TraesCS5A01G136400 chr6D 96.552 87 3 0 7142 7228 380781782 380781868 2.200000e-30 145.0
81 TraesCS5A01G136400 chr6D 96.591 88 1 2 7142 7228 385917027 385916941 2.200000e-30 145.0
82 TraesCS5A01G136400 chr6D 96.552 87 3 0 7142 7228 468901954 468902040 2.200000e-30 145.0
83 TraesCS5A01G136400 chr6D 95.506 89 4 0 7141 7229 31474943 31474855 7.910000e-30 143.0
84 TraesCS5A01G136400 chr6D 93.684 95 6 0 7143 7237 229430748 229430654 7.910000e-30 143.0
85 TraesCS5A01G136400 chr6D 94.565 92 5 0 7141 7232 291718566 291718657 7.910000e-30 143.0
86 TraesCS5A01G136400 chr6D 94.565 92 5 0 7137 7228 464673605 464673696 7.910000e-30 143.0
87 TraesCS5A01G136400 chr6D 94.505 91 5 0 7144 7234 271233443 271233533 2.840000e-29 141.0
88 TraesCS5A01G136400 chr6D 92.208 77 6 0 5008 5084 408218398 408218474 8.020000e-20 110.0
89 TraesCS5A01G136400 chr6D 86.420 81 11 0 5007 5087 928047 928127 1.040000e-13 89.8
90 TraesCS5A01G136400 chr6D 78.814 118 23 2 7230 7346 78348879 78348763 2.260000e-10 78.7
91 TraesCS5A01G136400 chr6D 90.385 52 5 0 7230 7281 363319369 363319420 1.360000e-07 69.4
92 TraesCS5A01G136400 chr6D 100.000 34 0 0 4498 4531 178855450 178855483 6.330000e-06 63.9
93 TraesCS5A01G136400 chr5D 95.854 1013 37 4 6138 7147 243314332 243313322 0.000000e+00 1633.0
94 TraesCS5A01G136400 chr5D 94.469 922 43 8 687 1606 243317176 243316261 0.000000e+00 1413.0
95 TraesCS5A01G136400 chr5D 94.140 785 20 12 5084 5843 243315625 243314842 0.000000e+00 1171.0
96 TraesCS5A01G136400 chr5D 93.034 646 42 3 1 645 501166144 501165501 0.000000e+00 941.0
97 TraesCS5A01G136400 chr5D 87.577 652 59 8 3609 4244 529277977 529277332 0.000000e+00 736.0
98 TraesCS5A01G136400 chr5D 95.385 390 11 3 2174 2562 243316000 243315617 1.390000e-171 614.0
99 TraesCS5A01G136400 chr5D 93.195 338 17 3 7225 7558 243313327 243312992 6.810000e-135 492.0
100 TraesCS5A01G136400 chr5D 82.500 440 43 20 4569 4996 201663194 201663611 9.330000e-94 355.0
101 TraesCS5A01G136400 chr5D 89.037 301 9 8 5837 6137 243314814 243314538 1.210000e-92 351.0
102 TraesCS5A01G136400 chr5D 80.123 488 64 24 4529 4995 370143538 370144013 4.370000e-87 333.0
103 TraesCS5A01G136400 chr5D 94.241 191 6 4 1608 1793 243316188 243315998 3.450000e-73 287.0
104 TraesCS5A01G136400 chr5D 79.924 264 29 17 4274 4531 294333313 294333068 1.010000e-38 172.0
105 TraesCS5A01G136400 chr5D 95.652 92 2 2 7141 7231 49290839 49290749 6.110000e-31 147.0
106 TraesCS5A01G136400 chr5D 80.000 235 18 12 4569 4781 376661233 376661006 6.110000e-31 147.0
107 TraesCS5A01G136400 chr5D 93.878 98 4 2 7138 7233 543829400 543829303 6.110000e-31 147.0
108 TraesCS5A01G136400 chr5D 92.929 99 3 4 7140 7237 456610437 456610342 2.840000e-29 141.0
109 TraesCS5A01G136400 chr5D 88.136 118 11 3 7112 7229 542716638 542716752 3.680000e-28 137.0
110 TraesCS5A01G136400 chr5D 89.744 78 8 0 5007 5084 519975647 519975570 4.830000e-17 100.0
111 TraesCS5A01G136400 chr5D 88.889 81 8 1 5007 5087 525764124 525764045 1.740000e-16 99.0
112 TraesCS5A01G136400 chr7A 89.708 1302 100 13 2957 4244 183646810 183645529 0.000000e+00 1631.0
113 TraesCS5A01G136400 chr7A 82.889 1724 192 53 2555 4244 84708411 84710065 0.000000e+00 1454.0
114 TraesCS5A01G136400 chr7A 97.895 95 1 1 1793 1887 619588628 619588721 6.070000e-36 163.0
115 TraesCS5A01G136400 chr7A 75.449 334 68 9 7230 7557 507170582 507170257 4.720000e-32 150.0
116 TraesCS5A01G136400 chr7A 92.381 105 5 3 7138 7241 422475158 422475056 6.110000e-31 147.0
117 TraesCS5A01G136400 chr7A 86.331 139 13 4 7106 7239 432392067 432392204 6.110000e-31 147.0
118 TraesCS5A01G136400 chr7A 95.000 80 4 0 5007 5086 74368420 74368341 7.960000e-25 126.0
119 TraesCS5A01G136400 chr7A 91.026 78 7 0 5007 5084 47271746 47271669 1.040000e-18 106.0
120 TraesCS5A01G136400 chr7A 88.235 85 10 0 5007 5091 121629284 121629368 1.340000e-17 102.0
121 TraesCS5A01G136400 chr4D 84.441 1716 177 36 2555 4248 472497580 472495933 0.000000e+00 1607.0
122 TraesCS5A01G136400 chr4D 92.758 649 44 3 1 648 300929915 300930561 0.000000e+00 935.0
123 TraesCS5A01G136400 chr4D 82.310 407 27 24 4616 5010 156518448 156518075 2.050000e-80 311.0
124 TraesCS5A01G136400 chr4D 81.522 276 32 13 4264 4531 323551020 323550756 7.680000e-50 209.0
125 TraesCS5A01G136400 chr4D 81.159 276 33 13 4264 4531 386535653 386535917 3.580000e-48 204.0
126 TraesCS5A01G136400 chr4D 81.897 232 36 4 646 871 360491772 360491541 2.780000e-44 191.0
127 TraesCS5A01G136400 chr4D 83.951 162 16 6 4623 4781 175790706 175790552 6.110000e-31 147.0
128 TraesCS5A01G136400 chr4D 90.769 65 4 2 4936 4999 122199940 122199877 1.350000e-12 86.1
129 TraesCS5A01G136400 chr4D 100.000 34 0 0 4498 4531 329011319 329011352 6.330000e-06 63.9
130 TraesCS5A01G136400 chr2A 88.855 1310 120 11 2950 4244 602138893 602140191 0.000000e+00 1587.0
131 TraesCS5A01G136400 chr2A 97.561 287 6 1 1888 2174 482409831 482410116 2.450000e-134 490.0
132 TraesCS5A01G136400 chr2A 96.886 289 8 1 1888 2176 639969124 639969411 4.100000e-132 483.0
133 TraesCS5A01G136400 chr2A 85.380 171 21 3 4264 4431 447151415 447151246 2.800000e-39 174.0
134 TraesCS5A01G136400 chr2A 97.938 97 1 1 1791 1887 639969102 639969197 4.690000e-37 167.0
135 TraesCS5A01G136400 chr2A 92.405 79 6 0 5008 5086 669554107 669554029 6.200000e-21 113.0
136 TraesCS5A01G136400 chr5B 93.564 1010 52 9 6142 7147 254945170 254946170 0.000000e+00 1493.0
137 TraesCS5A01G136400 chr5B 93.079 968 57 6 644 1606 254942232 254943194 0.000000e+00 1408.0
138 TraesCS5A01G136400 chr5B 86.261 575 40 18 5084 5649 254943772 254944316 8.450000e-164 588.0
139 TraesCS5A01G136400 chr5B 94.065 337 15 2 7225 7558 254946165 254946499 2.430000e-139 507.0
140 TraesCS5A01G136400 chr5B 90.769 260 16 6 5879 6134 254944716 254944971 2.610000e-89 340.0
141 TraesCS5A01G136400 chr5B 90.411 146 11 2 5699 5843 254944487 254944630 1.000000e-43 189.0
142 TraesCS5A01G136400 chr5B 94.059 101 4 2 7137 7235 417444287 417444387 1.310000e-32 152.0
143 TraesCS5A01G136400 chr5B 90.435 115 4 6 7141 7249 492096602 492096715 2.200000e-30 145.0
144 TraesCS5A01G136400 chr5B 94.382 89 3 1 1631 1719 254943264 254943350 1.320000e-27 135.0
145 TraesCS5A01G136400 chr5B 90.000 80 8 0 5007 5086 87237472 87237393 3.730000e-18 104.0
146 TraesCS5A01G136400 chr5B 94.737 57 3 0 5646 5702 254944339 254944395 1.040000e-13 89.8
147 TraesCS5A01G136400 chr1A 93.478 644 40 2 1 643 472898665 472899307 0.000000e+00 955.0
148 TraesCS5A01G136400 chr1A 89.510 429 20 7 4579 4998 100682794 100682382 3.130000e-143 520.0
149 TraesCS5A01G136400 chr1A 80.051 787 83 34 4264 5006 296927164 296927920 4.040000e-142 516.0
150 TraesCS5A01G136400 chr1A 96.918 292 8 1 1888 2179 232326141 232326431 8.810000e-134 488.0
151 TraesCS5A01G136400 chr1A 97.213 287 7 1 1888 2174 42511758 42512043 1.140000e-132 484.0
152 TraesCS5A01G136400 chr1A 87.500 312 28 6 4526 4827 316321972 316322282 4.340000e-92 350.0
153 TraesCS5A01G136400 chr1A 85.965 171 20 3 4264 4431 100683119 100682950 6.030000e-41 180.0
154 TraesCS5A01G136400 chr1A 84.795 171 22 3 4264 4431 316321720 316321889 1.300000e-37 169.0
155 TraesCS5A01G136400 chr1A 97.000 100 2 1 1789 1888 248417816 248417914 4.690000e-37 167.0
156 TraesCS5A01G136400 chr1A 97.938 97 1 1 1791 1887 572331699 572331604 4.690000e-37 167.0
157 TraesCS5A01G136400 chr1A 95.833 96 2 2 1795 1890 42511740 42511833 3.650000e-33 154.0
158 TraesCS5A01G136400 chr1A 94.792 96 4 1 7137 7232 543063461 543063555 1.700000e-31 148.0
159 TraesCS5A01G136400 chr1A 91.250 80 7 0 5007 5086 454530260 454530181 8.020000e-20 110.0
160 TraesCS5A01G136400 chr1A 89.744 78 8 0 5007 5084 390693508 390693431 4.830000e-17 100.0
161 TraesCS5A01G136400 chr1A 87.719 57 7 0 7227 7283 23338765 23338709 4.890000e-07 67.6
162 TraesCS5A01G136400 chr4A 92.508 654 46 3 1 653 18792392 18793043 0.000000e+00 933.0
163 TraesCS5A01G136400 chr4A 97.561 287 6 1 1888 2174 47646396 47646681 2.450000e-134 490.0
164 TraesCS5A01G136400 chr4A 97.561 287 6 1 1888 2174 219188125 219187840 2.450000e-134 490.0
165 TraesCS5A01G136400 chr4A 97.552 286 6 1 1888 2173 396762252 396762536 8.810000e-134 488.0
166 TraesCS5A01G136400 chr4A 95.745 94 4 0 7141 7234 6801367 6801460 1.310000e-32 152.0
167 TraesCS5A01G136400 chr4A 93.000 100 5 2 1791 1890 40863894 40863991 2.200000e-30 145.0
168 TraesCS5A01G136400 chr4A 88.506 87 9 1 5007 5093 435035746 435035661 3.730000e-18 104.0
169 TraesCS5A01G136400 chr3A 90.023 431 21 7 4584 5006 521723485 521723901 8.630000e-149 538.0
170 TraesCS5A01G136400 chr3A 96.886 289 8 1 1888 2176 518488456 518488743 4.100000e-132 483.0
171 TraesCS5A01G136400 chr3A 86.192 449 36 16 4569 4998 13401939 13401498 5.340000e-126 462.0
172 TraesCS5A01G136400 chr3A 84.239 184 19 4 4249 4431 521723147 521723321 3.630000e-38 171.0
173 TraesCS5A01G136400 chr3A 96.040 101 3 1 1787 1887 518488430 518488529 6.070000e-36 163.0
174 TraesCS5A01G136400 chr3A 94.175 103 3 3 1793 1894 106444565 106444465 3.650000e-33 154.0
175 TraesCS5A01G136400 chr1B 86.653 487 40 13 4529 4998 429593344 429592866 4.040000e-142 516.0
176 TraesCS5A01G136400 chr1B 96.809 94 2 1 7141 7234 623737801 623737709 1.020000e-33 156.0
177 TraesCS5A01G136400 chr1B 93.750 80 5 0 5007 5086 305246448 305246527 3.700000e-23 121.0
178 TraesCS5A01G136400 chr1B 86.316 95 12 1 1793 1887 626161359 626161452 1.340000e-17 102.0
179 TraesCS5A01G136400 chrUn 89.901 406 21 10 4616 5007 11032872 11032473 8.750000e-139 505.0
180 TraesCS5A01G136400 chrUn 89.811 265 16 2 4734 4998 325541221 325540968 5.650000e-86 329.0
181 TraesCS5A01G136400 chrUn 94.792 96 3 2 7140 7234 16372954 16372860 1.700000e-31 148.0
182 TraesCS5A01G136400 chrUn 95.699 93 2 2 7137 7228 55723703 55723612 1.700000e-31 148.0
183 TraesCS5A01G136400 chrUn 94.565 92 5 0 7137 7228 27602559 27602650 7.910000e-30 143.0
184 TraesCS5A01G136400 chrUn 94.565 92 5 0 7138 7229 325927177 325927268 7.910000e-30 143.0
185 TraesCS5A01G136400 chrUn 90.244 82 7 1 5007 5087 83523382 83523301 1.040000e-18 106.0
186 TraesCS5A01G136400 chrUn 94.000 50 3 0 4957 5006 19492646 19492597 8.130000e-10 76.8
187 TraesCS5A01G136400 chr6A 97.603 292 6 1 1888 2178 22430456 22430747 4.070000e-137 499.0
188 TraesCS5A01G136400 chr6A 80.072 276 36 13 4264 4531 66261462 66261726 3.600000e-43 187.0
189 TraesCS5A01G136400 chr6A 98.969 97 1 0 1792 1888 22430435 22430531 2.800000e-39 174.0
190 TraesCS5A01G136400 chr4B 89.811 265 16 2 4734 4998 630671092 630671345 5.650000e-86 329.0
191 TraesCS5A01G136400 chr4B 95.745 94 4 0 7136 7229 403270686 403270779 1.310000e-32 152.0
192 TraesCS5A01G136400 chr4B 95.699 93 3 1 7144 7236 497489123 497489214 1.700000e-31 148.0
193 TraesCS5A01G136400 chr4B 87.931 116 11 3 7144 7257 548118340 548118226 4.760000e-27 134.0
194 TraesCS5A01G136400 chr7B 83.069 189 31 1 643 831 725344750 725344937 3.630000e-38 171.0
195 TraesCS5A01G136400 chr2B 96.154 104 2 2 1785 1887 700210329 700210431 1.300000e-37 169.0
196 TraesCS5A01G136400 chr2B 97.895 95 1 1 1793 1887 666485086 666484993 6.070000e-36 163.0
197 TraesCS5A01G136400 chr2B 82.456 114 19 1 646 759 465645329 465645217 1.740000e-16 99.0
198 TraesCS5A01G136400 chr6B 97.778 90 2 0 7143 7232 349967648 349967737 1.020000e-33 156.0
199 TraesCS5A01G136400 chr6B 96.774 93 3 0 7139 7231 440684159 440684067 1.020000e-33 156.0
200 TraesCS5A01G136400 chr3B 91.358 81 7 0 5007 5087 414168006 414167926 2.230000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G136400 chr5A 307703664 307711221 7557 False 13958.000000 13958 100.000000 1 7558 1 chr5A.!!$F1 7557
1 TraesCS5A01G136400 chr5A 641397505 641398898 1393 True 1561.000000 1561 87.019000 2856 4243 1 chr5A.!!$R1 1387
2 TraesCS5A01G136400 chr2D 375252726 375254408 1682 True 1978.000000 1978 88.068000 2555 4244 1 chr2D.!!$R5 1689
3 TraesCS5A01G136400 chr2D 612983507 612985167 1660 False 1712.000000 1712 85.422000 2557 4244 1 chr2D.!!$F5 1687
4 TraesCS5A01G136400 chr2D 129835271 129836462 1191 False 1360.000000 1360 87.378000 3034 4244 1 chr2D.!!$F1 1210
5 TraesCS5A01G136400 chr2D 340280388 340281389 1001 True 1201.000000 1201 88.496000 3245 4244 1 chr2D.!!$R4 999
6 TraesCS5A01G136400 chr2D 608963478 608964130 652 False 928.000000 928 92.261000 1 657 1 chr2D.!!$F4 656
7 TraesCS5A01G136400 chr3D 400271545 400273211 1666 True 1844.000000 1844 86.836000 2578 4244 1 chr3D.!!$R4 1666
8 TraesCS5A01G136400 chr3D 188363552 188365183 1631 True 1402.000000 1402 82.591000 2558 4249 1 chr3D.!!$R1 1691
9 TraesCS5A01G136400 chr3D 398409838 398410804 966 False 1061.000000 1061 86.727000 3278 4244 1 chr3D.!!$F1 966
10 TraesCS5A01G136400 chr7D 78424932 78426607 1675 True 1797.000000 1797 86.207000 2555 4241 1 chr7D.!!$R3 1686
11 TraesCS5A01G136400 chr7D 535734115 535735691 1576 True 1604.000000 1604 85.234000 2594 4175 1 chr7D.!!$R9 1581
12 TraesCS5A01G136400 chr7D 58541710 58542359 649 True 939.000000 939 92.683000 1 655 1 chr7D.!!$R2 654
13 TraesCS5A01G136400 chr1D 151431816 151433493 1677 False 1781.000000 1781 86.030000 2555 4244 1 chr1D.!!$F4 1689
14 TraesCS5A01G136400 chr1D 31282820 31284466 1646 True 1712.000000 1712 85.539000 2555 4244 1 chr1D.!!$R2 1689
15 TraesCS5A01G136400 chr1D 342163829 342165487 1658 True 1698.000000 1698 85.298000 2554 4244 1 chr1D.!!$R6 1690
16 TraesCS5A01G136400 chr1D 241008423 241010054 1631 False 1681.000000 1681 85.457000 2605 4244 1 chr1D.!!$F5 1639
17 TraesCS5A01G136400 chr1D 425531268 425532516 1248 True 1395.000000 1395 86.903000 2964 4244 1 chr1D.!!$R9 1280
18 TraesCS5A01G136400 chr1D 481679260 481680503 1243 True 1188.000000 1188 84.227000 2984 4244 1 chr1D.!!$R11 1260
19 TraesCS5A01G136400 chr1D 315984345 315985308 963 False 1044.000000 1044 86.592000 3293 4244 1 chr1D.!!$F7 951
20 TraesCS5A01G136400 chr1D 268743416 268744065 649 True 935.000000 935 92.638000 1 650 1 chr1D.!!$R4 649
21 TraesCS5A01G136400 chr1D 307084105 307084753 648 False 935.000000 935 92.638000 1 651 1 chr1D.!!$F6 650
22 TraesCS5A01G136400 chr1D 468237847 468238725 878 True 924.000000 924 85.824000 3349 4244 1 chr1D.!!$R10 895
23 TraesCS5A01G136400 chr6D 414469890 414471462 1572 False 1705.000000 1705 86.417000 2645 4243 1 chr6D.!!$F14 1598
24 TraesCS5A01G136400 chr6D 423799485 423801138 1653 False 1550.000000 1550 83.903000 2552 4244 1 chr6D.!!$F15 1692
25 TraesCS5A01G136400 chr6D 387107516 387108732 1216 False 1175.000000 1175 84.294000 2995 4244 1 chr6D.!!$F11 1249
26 TraesCS5A01G136400 chr6D 58438637 58439585 948 True 1116.000000 1116 87.938000 2557 3518 1 chr6D.!!$R3 961
27 TraesCS5A01G136400 chr6D 100901652 100902806 1154 True 1110.000000 1110 84.245000 3057 4244 1 chr6D.!!$R6 1187
28 TraesCS5A01G136400 chr6D 84623725 84624769 1044 True 990.000000 990 83.960000 3166 4242 1 chr6D.!!$R5 1076
29 TraesCS5A01G136400 chr6D 211128214 211128857 643 True 946.000000 946 93.189000 1 644 1 chr6D.!!$R7 643
30 TraesCS5A01G136400 chr6D 413041172 413041783 611 False 689.000000 689 87.279000 3637 4244 1 chr6D.!!$F13 607
31 TraesCS5A01G136400 chr6D 47379927 47380603 676 False 586.000000 586 82.878000 3573 4244 1 chr6D.!!$F4 671
32 TraesCS5A01G136400 chr5D 501165501 501166144 643 True 941.000000 941 93.034000 1 645 1 chr5D.!!$R5 644
33 TraesCS5A01G136400 chr5D 243312992 243317176 4184 True 851.571429 1633 93.760143 687 7558 7 chr5D.!!$R10 6871
34 TraesCS5A01G136400 chr5D 529277332 529277977 645 True 736.000000 736 87.577000 3609 4244 1 chr5D.!!$R8 635
35 TraesCS5A01G136400 chr7A 183645529 183646810 1281 True 1631.000000 1631 89.708000 2957 4244 1 chr7A.!!$R3 1287
36 TraesCS5A01G136400 chr7A 84708411 84710065 1654 False 1454.000000 1454 82.889000 2555 4244 1 chr7A.!!$F1 1689
37 TraesCS5A01G136400 chr4D 472495933 472497580 1647 True 1607.000000 1607 84.441000 2555 4248 1 chr4D.!!$R6 1693
38 TraesCS5A01G136400 chr4D 300929915 300930561 646 False 935.000000 935 92.758000 1 648 1 chr4D.!!$F1 647
39 TraesCS5A01G136400 chr2A 602138893 602140191 1298 False 1587.000000 1587 88.855000 2950 4244 1 chr2A.!!$F2 1294
40 TraesCS5A01G136400 chr5B 254942232 254946499 4267 False 593.725000 1493 92.158500 644 7558 8 chr5B.!!$F3 6914
41 TraesCS5A01G136400 chr1A 472898665 472899307 642 False 955.000000 955 93.478000 1 643 1 chr1A.!!$F4 642
42 TraesCS5A01G136400 chr1A 296927164 296927920 756 False 516.000000 516 80.051000 4264 5006 1 chr1A.!!$F3 742
43 TraesCS5A01G136400 chr1A 100682382 100683119 737 True 350.000000 520 87.737500 4264 4998 2 chr1A.!!$R5 734
44 TraesCS5A01G136400 chr1A 316321720 316322282 562 False 259.500000 350 86.147500 4264 4827 2 chr1A.!!$F7 563
45 TraesCS5A01G136400 chr4A 18792392 18793043 651 False 933.000000 933 92.508000 1 653 1 chr4A.!!$F2 652
46 TraesCS5A01G136400 chr3A 521723147 521723901 754 False 354.500000 538 87.131000 4249 5006 2 chr3A.!!$F2 757

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
600 603 0.108138 ATCCACCTTAGACGCACAGC 60.108 55.0 0.00 0.00 0.00 4.40 F
1861 1945 0.323360 TAGGGTTGGAGTGGCAATGC 60.323 55.0 0.00 0.00 0.00 3.56 F
1933 2017 0.109723 GTGTAGGGTTGGAGTGGCAA 59.890 55.0 0.00 0.00 0.00 4.52 F
1936 2020 0.323360 TAGGGTTGGAGTGGCAATGC 60.323 55.0 0.00 0.00 0.00 3.56 F
3918 4154 1.207791 AGAGCCCCATCTTACTGTGG 58.792 55.0 0.00 0.00 35.22 4.17 F
4259 4521 0.527817 GGCCCACTGATTACGAGTCG 60.528 60.0 11.85 11.85 0.00 4.18 F
5013 5327 0.034863 TCGTAATCCTTGGTTGGGCC 60.035 55.0 0.00 0.00 37.90 5.80 F
5038 5352 0.462225 TTTTGTCCGTGCCGACTCAA 60.462 50.0 0.00 0.00 33.70 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1839 1923 0.109723 TTGCCACTCCAACCCTACAC 59.890 55.000 0.00 0.0 0.00 2.90 R
3357 3526 0.251832 TGGAGGAAGAGGAAGCTCGT 60.252 55.000 0.00 0.0 0.00 4.18 R
3892 4127 0.325671 AAGATGGGGCTCTTCTCCGA 60.326 55.000 2.90 0.0 29.38 4.55 R
3920 4156 2.351276 CTAGCCACCACCACCACC 59.649 66.667 0.00 0.0 0.00 4.61 R
4806 5120 0.109342 AGCAGTGCTAGCCAACACTT 59.891 50.000 18.11 0.0 44.59 3.16 R
5063 5377 0.960364 GAGCAACTTCAATGGGGCGA 60.960 55.000 0.00 0.0 0.00 5.54 R
6384 7116 2.077687 GGATCCAAATCCCTGCACAT 57.922 50.000 6.95 0.0 45.11 3.21 R
7027 7759 1.059098 TGGCCAGCAGAGAGAGAAAA 58.941 50.000 0.00 0.0 0.00 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 0.684479 TGCAGAGCCGGACACTATCT 60.684 55.000 5.05 0.00 0.00 1.98
67 68 3.130516 CAGAGCCGGACACTATCTTTGTA 59.869 47.826 5.05 0.00 0.00 2.41
93 94 7.506328 TCGAAATCTTCTATGGAGTATTCGA 57.494 36.000 13.14 13.14 0.00 3.71
121 122 1.289694 CTGCCTTGCAATGCCGAAA 59.710 52.632 21.77 4.51 38.41 3.46
135 136 1.440188 CGAAAACAATCTGCGCGCA 60.440 52.632 34.12 34.12 0.00 6.09
162 163 2.270352 TCGTCATTGAAGCCTGGTTT 57.730 45.000 0.00 0.00 0.00 3.27
185 186 1.063114 GGGCTACTGAGGGAGTCCTAA 60.063 57.143 9.58 0.00 45.05 2.69
189 190 4.443598 GGCTACTGAGGGAGTCCTAAATTG 60.444 50.000 9.58 0.00 45.05 2.32
190 191 4.443598 GCTACTGAGGGAGTCCTAAATTGG 60.444 50.000 9.58 0.00 45.05 3.16
433 436 9.060347 CAACAACAATCATAATCATAGGCTAGT 57.940 33.333 0.00 0.00 0.00 2.57
448 451 4.101856 AGGCTAGTTTCTAGGGTTTAGCA 58.898 43.478 14.65 0.00 36.21 3.49
453 456 7.256368 GGCTAGTTTCTAGGGTTTAGCATCTAT 60.256 40.741 14.65 0.00 36.21 1.98
498 501 9.899226 TTCTTGTAATACTCATATCATCACGAG 57.101 33.333 0.00 0.00 0.00 4.18
518 521 4.142138 CGAGCAATCAAGTAGGAAGTAGGT 60.142 45.833 0.00 0.00 0.00 3.08
566 569 2.489985 CCTGGGTAAACATTGTGTCCCA 60.490 50.000 19.06 19.06 41.96 4.37
573 576 2.047274 ATTGTGTCCCACGCCTCG 60.047 61.111 0.00 0.00 37.14 4.63
585 588 1.466856 ACGCCTCGTGTTACTATCCA 58.533 50.000 0.00 0.00 39.18 3.41
600 603 0.108138 ATCCACCTTAGACGCACAGC 60.108 55.000 0.00 0.00 0.00 4.40
624 627 2.332117 GGACCCCTTACCCGATATTCA 58.668 52.381 0.00 0.00 0.00 2.57
656 659 1.153765 CGACAGCGAGCCATCTTGA 60.154 57.895 0.00 0.00 40.82 3.02
660 663 0.392193 CAGCGAGCCATCTTGAAGGT 60.392 55.000 0.00 0.00 0.00 3.50
668 671 1.470098 CCATCTTGAAGGTCCGCAAAG 59.530 52.381 0.00 0.00 0.00 2.77
669 672 2.154462 CATCTTGAAGGTCCGCAAAGT 58.846 47.619 0.00 0.00 0.00 2.66
690 693 1.363807 CATATCAGCGACGGAGCCA 59.636 57.895 0.00 0.00 38.01 4.75
692 695 1.391933 ATATCAGCGACGGAGCCACA 61.392 55.000 0.00 0.00 38.01 4.17
747 750 6.612247 TTTTTCTTTCGATGACTGCTACAA 57.388 33.333 0.00 0.00 0.00 2.41
759 762 1.220749 GCTACAATGGTGCCGGAGA 59.779 57.895 5.05 0.00 0.00 3.71
765 768 2.185310 AATGGTGCCGGAGACAGGTC 62.185 60.000 5.05 0.00 0.00 3.85
766 769 3.311110 GGTGCCGGAGACAGGTCA 61.311 66.667 5.05 0.00 0.00 4.02
768 771 2.203640 TGCCGGAGACAGGTCACT 60.204 61.111 5.05 0.00 0.00 3.41
787 790 3.649986 GCGTTGGTGTCAAGCGCT 61.650 61.111 2.64 2.64 43.27 5.92
808 811 3.531538 TGAGACGTTCTGCTGTCTTTTT 58.468 40.909 0.00 0.00 45.09 1.94
835 838 4.764679 TGTCATGTTGGTCTTTATGTGC 57.235 40.909 0.00 0.00 0.00 4.57
843 846 6.477253 TGTTGGTCTTTATGTGCCTTGTATA 58.523 36.000 0.00 0.00 0.00 1.47
877 885 7.474398 ACGAATGAGACACATATTCATGAAG 57.526 36.000 14.54 2.96 38.38 3.02
888 896 9.696917 ACACATATTCATGAAGAAAAAGGTTTC 57.303 29.630 14.54 0.00 40.22 2.78
937 945 1.784283 GTTGATTTGGTTTGCGAACGG 59.216 47.619 10.73 0.00 36.61 4.44
1163 1171 1.344496 CCTCCATTCTCAGGTACCCCT 60.344 57.143 8.74 0.00 44.02 4.79
1199 1207 0.890996 CACTGACTTCCAGCCCCAAC 60.891 60.000 0.00 0.00 46.81 3.77
1250 1258 0.891373 CAGGAGGCTCTCGACTTTGA 59.109 55.000 15.23 0.00 0.00 2.69
1396 1404 1.291184 CGCGCTCATGAAGGTGTTCA 61.291 55.000 5.56 0.00 46.81 3.18
1491 1499 4.764172 CTGGCTATGATATAACTGCCCTC 58.236 47.826 0.00 0.00 39.60 4.30
1621 1701 7.461043 TGTTATGTATATTAGGGAGGGAGCATT 59.539 37.037 0.00 0.00 0.00 3.56
1627 1707 1.904440 AGGGAGGGAGCATTCTGAAT 58.096 50.000 0.00 0.00 0.00 2.57
1761 1845 7.604545 CCGTTATCTCTGATAGAGTGATAGTGA 59.395 40.741 5.81 0.00 42.83 3.41
1790 1874 2.958355 CTGGTGTGGTCAGTTGGAAAAT 59.042 45.455 0.00 0.00 0.00 1.82
1791 1875 4.141287 CTGGTGTGGTCAGTTGGAAAATA 58.859 43.478 0.00 0.00 0.00 1.40
1792 1876 4.537751 TGGTGTGGTCAGTTGGAAAATAA 58.462 39.130 0.00 0.00 0.00 1.40
1793 1877 4.582656 TGGTGTGGTCAGTTGGAAAATAAG 59.417 41.667 0.00 0.00 0.00 1.73
1794 1878 4.022329 GGTGTGGTCAGTTGGAAAATAAGG 60.022 45.833 0.00 0.00 0.00 2.69
1795 1879 4.022329 GTGTGGTCAGTTGGAAAATAAGGG 60.022 45.833 0.00 0.00 0.00 3.95
1796 1880 3.056821 GTGGTCAGTTGGAAAATAAGGGC 60.057 47.826 0.00 0.00 0.00 5.19
1797 1881 2.496070 GGTCAGTTGGAAAATAAGGGCC 59.504 50.000 0.00 0.00 0.00 5.80
1798 1882 3.431415 GTCAGTTGGAAAATAAGGGCCT 58.569 45.455 0.00 0.00 0.00 5.19
1799 1883 3.444034 GTCAGTTGGAAAATAAGGGCCTC 59.556 47.826 6.46 0.00 0.00 4.70
1800 1884 3.333680 TCAGTTGGAAAATAAGGGCCTCT 59.666 43.478 6.46 0.00 0.00 3.69
1801 1885 4.089361 CAGTTGGAAAATAAGGGCCTCTT 58.911 43.478 6.46 7.24 39.40 2.85
1802 1886 4.528206 CAGTTGGAAAATAAGGGCCTCTTT 59.472 41.667 6.46 7.42 36.93 2.52
1803 1887 4.528206 AGTTGGAAAATAAGGGCCTCTTTG 59.472 41.667 6.46 0.00 36.93 2.77
1804 1888 4.396357 TGGAAAATAAGGGCCTCTTTGA 57.604 40.909 6.46 0.00 36.93 2.69
1805 1889 4.946646 TGGAAAATAAGGGCCTCTTTGAT 58.053 39.130 6.46 0.00 36.93 2.57
1806 1890 5.341169 TGGAAAATAAGGGCCTCTTTGATT 58.659 37.500 6.46 0.00 36.93 2.57
1807 1891 5.422012 TGGAAAATAAGGGCCTCTTTGATTC 59.578 40.000 6.46 7.32 36.93 2.52
1808 1892 5.422012 GGAAAATAAGGGCCTCTTTGATTCA 59.578 40.000 6.46 0.00 36.93 2.57
1809 1893 6.098838 GGAAAATAAGGGCCTCTTTGATTCAT 59.901 38.462 6.46 0.00 36.93 2.57
1810 1894 7.287696 GGAAAATAAGGGCCTCTTTGATTCATA 59.712 37.037 6.46 0.00 36.93 2.15
1811 1895 7.830099 AAATAAGGGCCTCTTTGATTCATAG 57.170 36.000 6.46 0.00 36.93 2.23
1812 1896 3.872459 AGGGCCTCTTTGATTCATAGG 57.128 47.619 0.00 5.38 0.00 2.57
1813 1897 3.397527 AGGGCCTCTTTGATTCATAGGA 58.602 45.455 0.00 0.85 0.00 2.94
1814 1898 3.986134 AGGGCCTCTTTGATTCATAGGAT 59.014 43.478 0.00 0.00 0.00 3.24
1815 1899 4.418190 AGGGCCTCTTTGATTCATAGGATT 59.582 41.667 0.00 0.00 0.00 3.01
1816 1900 5.103344 AGGGCCTCTTTGATTCATAGGATTT 60.103 40.000 0.00 0.00 0.00 2.17
1817 1901 5.600069 GGGCCTCTTTGATTCATAGGATTTT 59.400 40.000 0.84 0.00 0.00 1.82
1818 1902 6.462067 GGGCCTCTTTGATTCATAGGATTTTG 60.462 42.308 0.84 0.00 0.00 2.44
1819 1903 6.322201 GGCCTCTTTGATTCATAGGATTTTGA 59.678 38.462 12.17 0.00 0.00 2.69
1820 1904 7.147846 GGCCTCTTTGATTCATAGGATTTTGAA 60.148 37.037 12.17 0.00 36.38 2.69
1821 1905 8.253113 GCCTCTTTGATTCATAGGATTTTGAAA 58.747 33.333 12.17 0.00 35.63 2.69
1824 1908 9.624697 TCTTTGATTCATAGGATTTTGAAAACG 57.375 29.630 4.57 0.00 35.63 3.60
1825 1909 9.410556 CTTTGATTCATAGGATTTTGAAAACGT 57.589 29.630 0.00 0.00 35.63 3.99
1828 1912 8.673711 TGATTCATAGGATTTTGAAAACGTAGG 58.326 33.333 0.00 0.00 35.63 3.18
1829 1913 8.801882 ATTCATAGGATTTTGAAAACGTAGGA 57.198 30.769 0.00 0.00 35.63 2.94
1830 1914 8.624367 TTCATAGGATTTTGAAAACGTAGGAA 57.376 30.769 11.77 11.77 33.08 3.36
1831 1915 8.801882 TCATAGGATTTTGAAAACGTAGGAAT 57.198 30.769 0.00 0.00 0.00 3.01
1832 1916 9.893634 TCATAGGATTTTGAAAACGTAGGAATA 57.106 29.630 0.00 0.00 0.00 1.75
1834 1918 7.625828 AGGATTTTGAAAACGTAGGAATAGG 57.374 36.000 0.00 0.00 0.00 2.57
1835 1919 7.399634 AGGATTTTGAAAACGTAGGAATAGGA 58.600 34.615 0.00 0.00 0.00 2.94
1836 1920 7.886446 AGGATTTTGAAAACGTAGGAATAGGAA 59.114 33.333 0.00 0.00 0.00 3.36
1837 1921 8.517056 GGATTTTGAAAACGTAGGAATAGGAAA 58.483 33.333 0.00 0.00 0.00 3.13
1838 1922 9.902196 GATTTTGAAAACGTAGGAATAGGAAAA 57.098 29.630 0.00 0.00 0.00 2.29
1839 1923 9.908152 ATTTTGAAAACGTAGGAATAGGAAAAG 57.092 29.630 0.00 0.00 0.00 2.27
1840 1924 8.454570 TTTGAAAACGTAGGAATAGGAAAAGT 57.545 30.769 0.00 0.00 0.00 2.66
1841 1925 7.429636 TGAAAACGTAGGAATAGGAAAAGTG 57.570 36.000 0.00 0.00 0.00 3.16
1842 1926 6.993902 TGAAAACGTAGGAATAGGAAAAGTGT 59.006 34.615 0.00 0.00 0.00 3.55
1843 1927 8.149647 TGAAAACGTAGGAATAGGAAAAGTGTA 58.850 33.333 0.00 0.00 0.00 2.90
1844 1928 8.543862 AAAACGTAGGAATAGGAAAAGTGTAG 57.456 34.615 0.00 0.00 0.00 2.74
1845 1929 6.218108 ACGTAGGAATAGGAAAAGTGTAGG 57.782 41.667 0.00 0.00 0.00 3.18
1846 1930 5.128335 ACGTAGGAATAGGAAAAGTGTAGGG 59.872 44.000 0.00 0.00 0.00 3.53
1847 1931 5.128335 CGTAGGAATAGGAAAAGTGTAGGGT 59.872 44.000 0.00 0.00 0.00 4.34
1848 1932 6.351626 CGTAGGAATAGGAAAAGTGTAGGGTT 60.352 42.308 0.00 0.00 0.00 4.11
1849 1933 5.816682 AGGAATAGGAAAAGTGTAGGGTTG 58.183 41.667 0.00 0.00 0.00 3.77
1850 1934 4.948004 GGAATAGGAAAAGTGTAGGGTTGG 59.052 45.833 0.00 0.00 0.00 3.77
1851 1935 5.280830 GGAATAGGAAAAGTGTAGGGTTGGA 60.281 44.000 0.00 0.00 0.00 3.53
1852 1936 3.790089 AGGAAAAGTGTAGGGTTGGAG 57.210 47.619 0.00 0.00 0.00 3.86
1853 1937 3.053826 AGGAAAAGTGTAGGGTTGGAGT 58.946 45.455 0.00 0.00 0.00 3.85
1854 1938 3.146847 GGAAAAGTGTAGGGTTGGAGTG 58.853 50.000 0.00 0.00 0.00 3.51
1855 1939 2.951229 AAAGTGTAGGGTTGGAGTGG 57.049 50.000 0.00 0.00 0.00 4.00
1856 1940 0.400594 AAGTGTAGGGTTGGAGTGGC 59.599 55.000 0.00 0.00 0.00 5.01
1857 1941 0.766674 AGTGTAGGGTTGGAGTGGCA 60.767 55.000 0.00 0.00 0.00 4.92
1858 1942 0.109723 GTGTAGGGTTGGAGTGGCAA 59.890 55.000 0.00 0.00 0.00 4.52
1859 1943 1.072266 TGTAGGGTTGGAGTGGCAAT 58.928 50.000 0.00 0.00 0.00 3.56
1860 1944 1.271871 TGTAGGGTTGGAGTGGCAATG 60.272 52.381 0.00 0.00 0.00 2.82
1861 1945 0.323360 TAGGGTTGGAGTGGCAATGC 60.323 55.000 0.00 0.00 0.00 3.56
1873 1957 1.957668 GGCAATGCCCATTTGAATCC 58.042 50.000 14.47 0.00 44.06 3.01
1874 1958 1.487558 GGCAATGCCCATTTGAATCCT 59.512 47.619 14.47 0.00 44.06 3.24
1875 1959 2.699846 GGCAATGCCCATTTGAATCCTA 59.300 45.455 14.47 0.00 44.06 2.94
1876 1960 3.325716 GGCAATGCCCATTTGAATCCTAT 59.674 43.478 14.47 0.00 44.06 2.57
1877 1961 4.527816 GGCAATGCCCATTTGAATCCTATA 59.472 41.667 14.47 0.00 44.06 1.31
1878 1962 5.337009 GGCAATGCCCATTTGAATCCTATAG 60.337 44.000 14.47 0.00 44.06 1.31
1879 1963 5.477984 GCAATGCCCATTTGAATCCTATAGA 59.522 40.000 0.00 0.00 0.00 1.98
1880 1964 6.015180 GCAATGCCCATTTGAATCCTATAGAA 60.015 38.462 0.00 0.00 0.00 2.10
1881 1965 7.310237 GCAATGCCCATTTGAATCCTATAGAAT 60.310 37.037 0.00 0.00 0.00 2.40
1882 1966 8.591072 CAATGCCCATTTGAATCCTATAGAATT 58.409 33.333 0.00 0.00 0.00 2.17
1883 1967 9.827198 AATGCCCATTTGAATCCTATAGAATTA 57.173 29.630 0.00 0.00 0.00 1.40
1884 1968 8.868522 TGCCCATTTGAATCCTATAGAATTAG 57.131 34.615 0.00 0.00 0.00 1.73
1885 1969 7.394359 TGCCCATTTGAATCCTATAGAATTAGC 59.606 37.037 0.00 0.00 0.00 3.09
1886 1970 7.394359 GCCCATTTGAATCCTATAGAATTAGCA 59.606 37.037 0.00 0.00 0.00 3.49
1887 1971 8.954350 CCCATTTGAATCCTATAGAATTAGCAG 58.046 37.037 0.00 0.00 0.00 4.24
1888 1972 9.730705 CCATTTGAATCCTATAGAATTAGCAGA 57.269 33.333 0.00 0.00 0.00 4.26
1903 1987 8.237267 AGAATTAGCAGATTTTGAAAACGTAGG 58.763 33.333 0.00 0.00 0.00 3.18
1904 1988 7.681939 ATTAGCAGATTTTGAAAACGTAGGA 57.318 32.000 0.00 0.00 0.00 2.94
1905 1989 7.499321 TTAGCAGATTTTGAAAACGTAGGAA 57.501 32.000 0.00 0.00 0.00 3.36
1906 1990 6.575162 AGCAGATTTTGAAAACGTAGGAAT 57.425 33.333 0.00 0.00 0.00 3.01
1907 1991 7.681939 AGCAGATTTTGAAAACGTAGGAATA 57.318 32.000 0.00 0.00 0.00 1.75
1908 1992 7.752695 AGCAGATTTTGAAAACGTAGGAATAG 58.247 34.615 0.00 0.00 0.00 1.73
1909 1993 6.967199 GCAGATTTTGAAAACGTAGGAATAGG 59.033 38.462 0.00 0.00 0.00 2.57
1910 1994 7.148306 GCAGATTTTGAAAACGTAGGAATAGGA 60.148 37.037 0.00 0.00 0.00 2.94
1911 1995 8.726988 CAGATTTTGAAAACGTAGGAATAGGAA 58.273 33.333 0.00 0.00 0.00 3.36
1912 1996 9.292195 AGATTTTGAAAACGTAGGAATAGGAAA 57.708 29.630 0.00 0.00 0.00 3.13
1913 1997 9.902196 GATTTTGAAAACGTAGGAATAGGAAAA 57.098 29.630 0.00 0.00 0.00 2.29
1914 1998 9.908152 ATTTTGAAAACGTAGGAATAGGAAAAG 57.092 29.630 0.00 0.00 0.00 2.27
1915 1999 8.454570 TTTGAAAACGTAGGAATAGGAAAAGT 57.545 30.769 0.00 0.00 0.00 2.66
1916 2000 7.429636 TGAAAACGTAGGAATAGGAAAAGTG 57.570 36.000 0.00 0.00 0.00 3.16
1917 2001 6.993902 TGAAAACGTAGGAATAGGAAAAGTGT 59.006 34.615 0.00 0.00 0.00 3.55
1918 2002 8.149647 TGAAAACGTAGGAATAGGAAAAGTGTA 58.850 33.333 0.00 0.00 0.00 2.90
1919 2003 8.543862 AAAACGTAGGAATAGGAAAAGTGTAG 57.456 34.615 0.00 0.00 0.00 2.74
1920 2004 6.218108 ACGTAGGAATAGGAAAAGTGTAGG 57.782 41.667 0.00 0.00 0.00 3.18
1921 2005 5.128335 ACGTAGGAATAGGAAAAGTGTAGGG 59.872 44.000 0.00 0.00 0.00 3.53
1922 2006 5.128335 CGTAGGAATAGGAAAAGTGTAGGGT 59.872 44.000 0.00 0.00 0.00 4.34
1923 2007 6.351626 CGTAGGAATAGGAAAAGTGTAGGGTT 60.352 42.308 0.00 0.00 0.00 4.11
1924 2008 5.816682 AGGAATAGGAAAAGTGTAGGGTTG 58.183 41.667 0.00 0.00 0.00 3.77
1925 2009 4.948004 GGAATAGGAAAAGTGTAGGGTTGG 59.052 45.833 0.00 0.00 0.00 3.77
1926 2010 5.280830 GGAATAGGAAAAGTGTAGGGTTGGA 60.281 44.000 0.00 0.00 0.00 3.53
1927 2011 3.790089 AGGAAAAGTGTAGGGTTGGAG 57.210 47.619 0.00 0.00 0.00 3.86
1928 2012 3.053826 AGGAAAAGTGTAGGGTTGGAGT 58.946 45.455 0.00 0.00 0.00 3.85
1929 2013 3.146847 GGAAAAGTGTAGGGTTGGAGTG 58.853 50.000 0.00 0.00 0.00 3.51
1930 2014 2.951229 AAAGTGTAGGGTTGGAGTGG 57.049 50.000 0.00 0.00 0.00 4.00
1931 2015 0.400594 AAGTGTAGGGTTGGAGTGGC 59.599 55.000 0.00 0.00 0.00 5.01
1932 2016 0.766674 AGTGTAGGGTTGGAGTGGCA 60.767 55.000 0.00 0.00 0.00 4.92
1933 2017 0.109723 GTGTAGGGTTGGAGTGGCAA 59.890 55.000 0.00 0.00 0.00 4.52
1934 2018 1.072266 TGTAGGGTTGGAGTGGCAAT 58.928 50.000 0.00 0.00 0.00 3.56
1935 2019 1.271871 TGTAGGGTTGGAGTGGCAATG 60.272 52.381 0.00 0.00 0.00 2.82
1936 2020 0.323360 TAGGGTTGGAGTGGCAATGC 60.323 55.000 0.00 0.00 0.00 3.56
1948 2032 1.957668 GGCAATGCCCATTTGAATCC 58.042 50.000 14.47 0.00 44.06 3.01
1949 2033 1.487558 GGCAATGCCCATTTGAATCCT 59.512 47.619 14.47 0.00 44.06 3.24
1950 2034 2.699846 GGCAATGCCCATTTGAATCCTA 59.300 45.455 14.47 0.00 44.06 2.94
1951 2035 3.325716 GGCAATGCCCATTTGAATCCTAT 59.674 43.478 14.47 0.00 44.06 2.57
1952 2036 4.527816 GGCAATGCCCATTTGAATCCTATA 59.472 41.667 14.47 0.00 44.06 1.31
1953 2037 5.337009 GGCAATGCCCATTTGAATCCTATAG 60.337 44.000 14.47 0.00 44.06 1.31
1954 2038 5.477984 GCAATGCCCATTTGAATCCTATAGA 59.522 40.000 0.00 0.00 0.00 1.98
1955 2039 6.015180 GCAATGCCCATTTGAATCCTATAGAA 60.015 38.462 0.00 0.00 0.00 2.10
1956 2040 7.310237 GCAATGCCCATTTGAATCCTATAGAAT 60.310 37.037 0.00 0.00 0.00 2.40
1957 2041 8.591072 CAATGCCCATTTGAATCCTATAGAATT 58.409 33.333 0.00 0.00 0.00 2.17
1958 2042 9.827198 AATGCCCATTTGAATCCTATAGAATTA 57.173 29.630 0.00 0.00 0.00 1.40
1959 2043 8.868522 TGCCCATTTGAATCCTATAGAATTAG 57.131 34.615 0.00 0.00 0.00 1.73
1960 2044 7.394359 TGCCCATTTGAATCCTATAGAATTAGC 59.606 37.037 0.00 0.00 0.00 3.09
1961 2045 7.394359 GCCCATTTGAATCCTATAGAATTAGCA 59.606 37.037 0.00 0.00 0.00 3.49
1962 2046 9.300681 CCCATTTGAATCCTATAGAATTAGCAA 57.699 33.333 0.00 0.00 0.00 3.91
1977 2061 8.922058 AGAATTAGCAATGATTGTTTGATGTC 57.078 30.769 7.05 0.00 0.00 3.06
1978 2062 8.525316 AGAATTAGCAATGATTGTTTGATGTCA 58.475 29.630 7.05 0.00 0.00 3.58
1979 2063 8.470040 AATTAGCAATGATTGTTTGATGTCAC 57.530 30.769 7.05 0.00 0.00 3.67
1980 2064 4.478699 AGCAATGATTGTTTGATGTCACG 58.521 39.130 7.05 0.00 0.00 4.35
1981 2065 3.609373 GCAATGATTGTTTGATGTCACGG 59.391 43.478 7.05 0.00 0.00 4.94
1982 2066 4.168014 CAATGATTGTTTGATGTCACGGG 58.832 43.478 0.00 0.00 0.00 5.28
1983 2067 3.133141 TGATTGTTTGATGTCACGGGA 57.867 42.857 0.00 0.00 0.00 5.14
1984 2068 3.481453 TGATTGTTTGATGTCACGGGAA 58.519 40.909 0.00 0.00 0.00 3.97
1985 2069 3.885901 TGATTGTTTGATGTCACGGGAAA 59.114 39.130 0.00 0.00 0.00 3.13
1986 2070 4.339530 TGATTGTTTGATGTCACGGGAAAA 59.660 37.500 0.00 0.00 0.00 2.29
1987 2071 4.720649 TTGTTTGATGTCACGGGAAAAA 57.279 36.364 0.00 0.00 0.00 1.94
1988 2072 4.035278 TGTTTGATGTCACGGGAAAAAC 57.965 40.909 0.00 0.00 0.00 2.43
1989 2073 3.444034 TGTTTGATGTCACGGGAAAAACA 59.556 39.130 12.54 12.54 34.62 2.83
1990 2074 4.082190 TGTTTGATGTCACGGGAAAAACAA 60.082 37.500 13.63 6.71 34.22 2.83
1991 2075 4.720649 TTGATGTCACGGGAAAAACAAA 57.279 36.364 0.00 0.00 0.00 2.83
1992 2076 4.300189 TGATGTCACGGGAAAAACAAAG 57.700 40.909 0.00 0.00 0.00 2.77
1993 2077 3.067461 TGATGTCACGGGAAAAACAAAGG 59.933 43.478 0.00 0.00 0.00 3.11
1994 2078 2.724454 TGTCACGGGAAAAACAAAGGA 58.276 42.857 0.00 0.00 0.00 3.36
1995 2079 3.090037 TGTCACGGGAAAAACAAAGGAA 58.910 40.909 0.00 0.00 0.00 3.36
1996 2080 3.702045 TGTCACGGGAAAAACAAAGGAAT 59.298 39.130 0.00 0.00 0.00 3.01
1997 2081 4.160626 TGTCACGGGAAAAACAAAGGAATT 59.839 37.500 0.00 0.00 0.00 2.17
1998 2082 4.506288 GTCACGGGAAAAACAAAGGAATTG 59.494 41.667 0.00 0.00 44.95 2.32
2012 2096 7.713764 CAAAGGAATTGTAAAAAGAGGTTGG 57.286 36.000 0.00 0.00 34.16 3.77
2013 2097 7.496747 CAAAGGAATTGTAAAAAGAGGTTGGA 58.503 34.615 0.00 0.00 34.16 3.53
2014 2098 6.901081 AGGAATTGTAAAAAGAGGTTGGAG 57.099 37.500 0.00 0.00 0.00 3.86
2015 2099 6.373759 AGGAATTGTAAAAAGAGGTTGGAGT 58.626 36.000 0.00 0.00 0.00 3.85
2016 2100 6.265422 AGGAATTGTAAAAAGAGGTTGGAGTG 59.735 38.462 0.00 0.00 0.00 3.51
2017 2101 6.405278 AATTGTAAAAAGAGGTTGGAGTGG 57.595 37.500 0.00 0.00 0.00 4.00
2018 2102 4.781775 TGTAAAAAGAGGTTGGAGTGGA 57.218 40.909 0.00 0.00 0.00 4.02
2019 2103 5.319043 TGTAAAAAGAGGTTGGAGTGGAT 57.681 39.130 0.00 0.00 0.00 3.41
2020 2104 5.070001 TGTAAAAAGAGGTTGGAGTGGATG 58.930 41.667 0.00 0.00 0.00 3.51
2021 2105 3.884037 AAAAGAGGTTGGAGTGGATGT 57.116 42.857 0.00 0.00 0.00 3.06
2022 2106 3.884037 AAAGAGGTTGGAGTGGATGTT 57.116 42.857 0.00 0.00 0.00 2.71
2023 2107 4.993705 AAAGAGGTTGGAGTGGATGTTA 57.006 40.909 0.00 0.00 0.00 2.41
2024 2108 4.993705 AAGAGGTTGGAGTGGATGTTAA 57.006 40.909 0.00 0.00 0.00 2.01
2025 2109 4.993705 AGAGGTTGGAGTGGATGTTAAA 57.006 40.909 0.00 0.00 0.00 1.52
2026 2110 5.520748 AGAGGTTGGAGTGGATGTTAAAT 57.479 39.130 0.00 0.00 0.00 1.40
2027 2111 5.892348 AGAGGTTGGAGTGGATGTTAAATT 58.108 37.500 0.00 0.00 0.00 1.82
2028 2112 6.314917 AGAGGTTGGAGTGGATGTTAAATTT 58.685 36.000 0.00 0.00 0.00 1.82
2029 2113 6.434340 AGAGGTTGGAGTGGATGTTAAATTTC 59.566 38.462 0.00 0.00 0.00 2.17
2030 2114 5.480422 AGGTTGGAGTGGATGTTAAATTTCC 59.520 40.000 0.00 0.00 0.00 3.13
2031 2115 5.480422 GGTTGGAGTGGATGTTAAATTTCCT 59.520 40.000 0.00 0.00 0.00 3.36
2032 2116 6.661805 GGTTGGAGTGGATGTTAAATTTCCTA 59.338 38.462 0.00 0.00 0.00 2.94
2033 2117 7.342026 GGTTGGAGTGGATGTTAAATTTCCTAT 59.658 37.037 0.00 0.00 0.00 2.57
2034 2118 7.880160 TGGAGTGGATGTTAAATTTCCTATG 57.120 36.000 0.00 0.00 0.00 2.23
2035 2119 7.638444 TGGAGTGGATGTTAAATTTCCTATGA 58.362 34.615 0.00 0.00 0.00 2.15
2036 2120 8.112822 TGGAGTGGATGTTAAATTTCCTATGAA 58.887 33.333 0.00 0.00 0.00 2.57
2037 2121 8.966868 GGAGTGGATGTTAAATTTCCTATGAAA 58.033 33.333 0.00 0.00 44.22 2.69
2083 2167 6.997655 GGAAAAATTCCTATGGGATCCAATC 58.002 40.000 15.23 0.00 46.57 2.67
2084 2168 6.554605 GGAAAAATTCCTATGGGATCCAATCA 59.445 38.462 15.23 2.44 46.57 2.57
2085 2169 7.236225 GGAAAAATTCCTATGGGATCCAATCAT 59.764 37.037 15.23 10.49 46.57 2.45
2086 2170 9.312904 GAAAAATTCCTATGGGATCCAATCATA 57.687 33.333 15.23 11.09 41.87 2.15
2087 2171 9.848238 AAAAATTCCTATGGGATCCAATCATAT 57.152 29.630 15.23 0.00 41.87 1.78
2088 2172 8.834004 AAATTCCTATGGGATCCAATCATATG 57.166 34.615 15.23 9.30 41.87 1.78
2089 2173 7.776291 ATTCCTATGGGATCCAATCATATGA 57.224 36.000 15.23 8.10 41.87 2.15
2090 2174 7.587375 TTCCTATGGGATCCAATCATATGAA 57.413 36.000 15.23 15.91 41.87 2.57
2091 2175 7.776291 TCCTATGGGATCCAATCATATGAAT 57.224 36.000 15.23 0.00 36.95 2.57
2092 2176 7.809238 TCCTATGGGATCCAATCATATGAATC 58.191 38.462 15.23 7.94 36.95 2.52
2093 2177 7.406739 TCCTATGGGATCCAATCATATGAATCA 59.593 37.037 15.23 0.00 36.95 2.57
2094 2178 8.057011 CCTATGGGATCCAATCATATGAATCAA 58.943 37.037 15.23 1.56 36.95 2.57
2095 2179 9.470399 CTATGGGATCCAATCATATGAATCAAA 57.530 33.333 15.23 1.23 36.95 2.69
2096 2180 7.770366 TGGGATCCAATCATATGAATCAAAG 57.230 36.000 15.23 0.00 0.00 2.77
2097 2181 6.722590 TGGGATCCAATCATATGAATCAAAGG 59.277 38.462 15.23 5.91 0.00 3.11
2098 2182 6.950041 GGGATCCAATCATATGAATCAAAGGA 59.050 38.462 15.23 10.74 0.00 3.36
2099 2183 7.094032 GGGATCCAATCATATGAATCAAAGGAC 60.094 40.741 15.23 6.17 0.00 3.85
2100 2184 7.094032 GGATCCAATCATATGAATCAAAGGACC 60.094 40.741 9.99 10.30 0.00 4.46
2101 2185 6.671605 TCCAATCATATGAATCAAAGGACCA 58.328 36.000 9.99 0.00 0.00 4.02
2102 2186 7.124721 TCCAATCATATGAATCAAAGGACCAA 58.875 34.615 9.99 0.00 0.00 3.67
2103 2187 7.068593 TCCAATCATATGAATCAAAGGACCAAC 59.931 37.037 9.99 0.00 0.00 3.77
2104 2188 7.147863 CCAATCATATGAATCAAAGGACCAACA 60.148 37.037 9.99 0.00 0.00 3.33
2105 2189 8.418662 CAATCATATGAATCAAAGGACCAACAT 58.581 33.333 9.99 0.00 0.00 2.71
2106 2190 9.645128 AATCATATGAATCAAAGGACCAACATA 57.355 29.630 9.99 0.00 0.00 2.29
2107 2191 8.681486 TCATATGAATCAAAGGACCAACATAG 57.319 34.615 1.98 0.00 0.00 2.23
2108 2192 7.720957 TCATATGAATCAAAGGACCAACATAGG 59.279 37.037 1.98 0.00 0.00 2.57
2109 2193 5.512942 TGAATCAAAGGACCAACATAGGA 57.487 39.130 0.00 0.00 0.00 2.94
2110 2194 5.886609 TGAATCAAAGGACCAACATAGGAA 58.113 37.500 0.00 0.00 0.00 3.36
2111 2195 6.310941 TGAATCAAAGGACCAACATAGGAAA 58.689 36.000 0.00 0.00 0.00 3.13
2112 2196 6.780031 TGAATCAAAGGACCAACATAGGAAAA 59.220 34.615 0.00 0.00 0.00 2.29
2113 2197 7.288852 TGAATCAAAGGACCAACATAGGAAAAA 59.711 33.333 0.00 0.00 0.00 1.94
2136 2220 8.899887 AAAATCCTAAGAATTTCAATCCTCCA 57.100 30.769 0.00 0.00 0.00 3.86
2137 2221 8.530804 AAATCCTAAGAATTTCAATCCTCCAG 57.469 34.615 0.00 0.00 0.00 3.86
2138 2222 6.891306 TCCTAAGAATTTCAATCCTCCAGA 57.109 37.500 0.00 0.00 0.00 3.86
2139 2223 7.270832 TCCTAAGAATTTCAATCCTCCAGAA 57.729 36.000 0.00 0.00 0.00 3.02
2140 2224 7.698912 TCCTAAGAATTTCAATCCTCCAGAAA 58.301 34.615 0.00 0.00 35.92 2.52
2141 2225 8.339247 TCCTAAGAATTTCAATCCTCCAGAAAT 58.661 33.333 0.00 0.00 42.10 2.17
2142 2226 8.628280 CCTAAGAATTTCAATCCTCCAGAAATC 58.372 37.037 0.00 0.00 40.11 2.17
2143 2227 7.415592 AAGAATTTCAATCCTCCAGAAATCC 57.584 36.000 0.00 0.00 40.11 3.01
2144 2228 6.739664 AGAATTTCAATCCTCCAGAAATCCT 58.260 36.000 0.00 0.00 40.11 3.24
2145 2229 7.876371 AGAATTTCAATCCTCCAGAAATCCTA 58.124 34.615 0.00 0.00 40.11 2.94
2146 2230 8.509441 AGAATTTCAATCCTCCAGAAATCCTAT 58.491 33.333 0.00 0.00 40.11 2.57
2147 2231 9.799106 GAATTTCAATCCTCCAGAAATCCTATA 57.201 33.333 0.00 0.00 40.11 1.31
2150 2234 9.989296 TTTCAATCCTCCAGAAATCCTATAAAA 57.011 29.630 0.00 0.00 0.00 1.52
2154 2238 9.593565 AATCCTCCAGAAATCCTATAAAATTCC 57.406 33.333 0.00 0.00 0.00 3.01
2155 2239 8.350180 TCCTCCAGAAATCCTATAAAATTCCT 57.650 34.615 0.00 0.00 0.00 3.36
2156 2240 8.791749 TCCTCCAGAAATCCTATAAAATTCCTT 58.208 33.333 0.00 0.00 0.00 3.36
2157 2241 9.426534 CCTCCAGAAATCCTATAAAATTCCTTT 57.573 33.333 0.00 0.00 0.00 3.11
2159 2243 9.989296 TCCAGAAATCCTATAAAATTCCTTTGA 57.011 29.630 0.00 0.00 0.00 2.69
2186 2270 7.378181 TCAAAGAAGCCCTAAAAACATGAATC 58.622 34.615 0.00 0.00 0.00 2.52
2227 2311 6.638468 GCAAATCACAGGACTTCTTTACAAAG 59.362 38.462 0.00 0.00 37.36 2.77
2416 2500 7.309770 ACCAAAGGGCATTTATACAGAAAAA 57.690 32.000 0.00 0.00 37.90 1.94
2420 2504 9.657419 CAAAGGGCATTTATACAGAAAAATTCT 57.343 29.630 0.00 0.00 41.70 2.40
2490 2574 3.005554 ACTGACCGCAGAATTTCTCATG 58.994 45.455 0.00 0.00 45.17 3.07
2491 2575 2.353889 CTGACCGCAGAATTTCTCATGG 59.646 50.000 0.00 1.66 45.17 3.66
3028 3163 2.837291 CCTCCTCCTCAGCCTCGG 60.837 72.222 0.00 0.00 0.00 4.63
3081 3216 2.733671 CTCGTACTCGCCACGACGA 61.734 63.158 0.00 3.09 43.05 4.20
3357 3526 4.849310 GCCATGGCCGCCTCGTAA 62.849 66.667 27.24 0.00 34.56 3.18
3571 3776 1.344763 CGAACCACCTCTTCCAGTTCT 59.655 52.381 0.00 0.00 35.73 3.01
3594 3799 3.071837 TCGGATGCGTAGGTGGCA 61.072 61.111 6.49 0.00 45.71 4.92
3892 4127 1.895707 GTCTTGCTGCTGCTGGTGT 60.896 57.895 17.00 0.00 40.48 4.16
3915 4151 2.103941 GGAGAAGAGCCCCATCTTACTG 59.896 54.545 0.00 0.00 39.63 2.74
3916 4152 2.769095 GAGAAGAGCCCCATCTTACTGT 59.231 50.000 0.00 0.00 39.63 3.55
3917 4153 2.503356 AGAAGAGCCCCATCTTACTGTG 59.497 50.000 0.00 0.00 39.63 3.66
3918 4154 1.207791 AGAGCCCCATCTTACTGTGG 58.792 55.000 0.00 0.00 35.22 4.17
3920 4156 0.620556 AGCCCCATCTTACTGTGGTG 59.379 55.000 0.00 0.00 33.55 4.17
4259 4521 0.527817 GGCCCACTGATTACGAGTCG 60.528 60.000 11.85 11.85 0.00 4.18
4298 4570 2.826128 AGTCTATGAGTCGCAAAGTGGA 59.174 45.455 0.00 0.00 0.00 4.02
4299 4571 3.119316 AGTCTATGAGTCGCAAAGTGGAG 60.119 47.826 0.00 0.00 0.00 3.86
4309 4581 1.006102 AAAGTGGAGGTCGACTGCG 60.006 57.895 16.46 0.00 41.01 5.18
4310 4582 1.461091 AAAGTGGAGGTCGACTGCGA 61.461 55.000 16.46 2.14 45.71 5.10
4327 4599 3.268330 TGCGATTCTCGTGTAGACTAGT 58.732 45.455 0.00 0.00 42.81 2.57
4328 4600 3.688185 TGCGATTCTCGTGTAGACTAGTT 59.312 43.478 0.00 0.00 42.81 2.24
4329 4601 4.155462 TGCGATTCTCGTGTAGACTAGTTT 59.845 41.667 0.00 0.00 42.81 2.66
4341 4613 4.199432 AGACTAGTTTACCGAGTCGAGA 57.801 45.455 15.64 0.00 43.57 4.04
4342 4614 4.768583 AGACTAGTTTACCGAGTCGAGAT 58.231 43.478 15.64 1.37 43.57 2.75
4352 4624 1.611006 CGAGTCGAGATGTGGATGGAT 59.389 52.381 6.73 0.00 0.00 3.41
4382 4654 1.281287 ACTAGTCTGGGCTAGTCGACA 59.719 52.381 19.50 2.84 46.05 4.35
4383 4655 2.092321 ACTAGTCTGGGCTAGTCGACAT 60.092 50.000 19.50 5.54 46.05 3.06
4384 4656 1.107114 AGTCTGGGCTAGTCGACATG 58.893 55.000 19.50 10.79 0.00 3.21
4385 4657 0.818296 GTCTGGGCTAGTCGACATGT 59.182 55.000 19.50 0.00 0.00 3.21
4388 4660 1.478510 CTGGGCTAGTCGACATGTTCT 59.521 52.381 19.50 2.14 0.00 3.01
4431 4703 6.624352 TTGATGGTATAAATGAGCTTGCTC 57.376 37.500 15.01 15.01 0.00 4.26
4432 4704 5.683681 TGATGGTATAAATGAGCTTGCTCA 58.316 37.500 24.76 24.76 37.79 4.26
4433 4705 6.301486 TGATGGTATAAATGAGCTTGCTCAT 58.699 36.000 26.67 26.67 45.06 2.90
4435 4707 5.065914 TGGTATAAATGAGCTTGCTCATCC 58.934 41.667 30.47 26.13 42.63 3.51
4436 4708 4.457257 GGTATAAATGAGCTTGCTCATCCC 59.543 45.833 30.47 21.85 42.63 3.85
4438 4710 1.099879 AATGAGCTTGCTCATCCCGC 61.100 55.000 30.47 3.81 42.63 6.13
4439 4711 3.267860 GAGCTTGCTCATCCCGCG 61.268 66.667 16.71 0.00 0.00 6.46
4440 4712 4.845580 AGCTTGCTCATCCCGCGG 62.846 66.667 21.04 21.04 0.00 6.46
4463 4735 2.579410 GGCAACCCTAGTTCTTTCCA 57.421 50.000 0.00 0.00 32.45 3.53
4464 4736 2.437413 GGCAACCCTAGTTCTTTCCAG 58.563 52.381 0.00 0.00 32.45 3.86
4466 4738 2.437413 CAACCCTAGTTCTTTCCAGGC 58.563 52.381 0.00 0.00 32.45 4.85
4467 4739 2.040412 CAACCCTAGTTCTTTCCAGGCT 59.960 50.000 0.00 0.00 32.45 4.58
4470 4742 2.087646 CCTAGTTCTTTCCAGGCTTGC 58.912 52.381 0.00 0.00 0.00 4.01
4471 4743 2.290577 CCTAGTTCTTTCCAGGCTTGCT 60.291 50.000 0.00 0.00 0.00 3.91
4472 4744 1.902938 AGTTCTTTCCAGGCTTGCTC 58.097 50.000 0.00 0.00 0.00 4.26
4473 4745 0.884514 GTTCTTTCCAGGCTTGCTCC 59.115 55.000 0.00 0.00 0.00 4.70
4478 4750 2.045536 CCAGGCTTGCTCCTCACC 60.046 66.667 0.00 0.00 33.25 4.02
4479 4751 2.600729 CCAGGCTTGCTCCTCACCT 61.601 63.158 0.00 0.00 33.25 4.00
4480 4752 1.267574 CCAGGCTTGCTCCTCACCTA 61.268 60.000 0.00 0.00 33.25 3.08
4483 4755 1.127343 GGCTTGCTCCTCACCTAGAT 58.873 55.000 0.00 0.00 0.00 1.98
4488 4760 1.365633 CTCCTCACCTAGATGCGCC 59.634 63.158 4.18 0.00 0.00 6.53
4489 4761 1.381191 TCCTCACCTAGATGCGCCA 60.381 57.895 4.18 0.00 0.00 5.69
4493 4765 3.849951 ACCTAGATGCGCCACCGG 61.850 66.667 4.18 0.00 34.32 5.28
4576 4871 1.761667 CCCTGAGGCCAGAGAGAGG 60.762 68.421 5.01 0.00 43.02 3.69
4577 4872 1.309347 CCTGAGGCCAGAGAGAGGA 59.691 63.158 5.01 0.00 43.02 3.71
4701 5008 1.271054 GGTGATGGGATCGATTGGGAG 60.271 57.143 0.00 0.00 0.00 4.30
4716 5024 1.761174 GGAGCTTGGGTTCCAGTGA 59.239 57.895 0.00 0.00 41.63 3.41
4729 5037 1.373497 CAGTGACTGGGACGTGAGC 60.373 63.158 4.28 0.00 0.00 4.26
4828 5142 1.302832 GTTGGCTAGCACTGCTGGT 60.303 57.895 18.24 0.00 40.10 4.00
4829 5143 0.890996 GTTGGCTAGCACTGCTGGTT 60.891 55.000 18.24 0.00 40.10 3.67
4830 5144 0.178992 TTGGCTAGCACTGCTGGTTT 60.179 50.000 18.24 0.00 40.10 3.27
4831 5145 0.178992 TGGCTAGCACTGCTGGTTTT 60.179 50.000 18.24 0.00 40.10 2.43
4832 5146 1.073125 TGGCTAGCACTGCTGGTTTTA 59.927 47.619 18.24 0.00 40.10 1.52
4833 5147 2.290896 TGGCTAGCACTGCTGGTTTTAT 60.291 45.455 18.24 0.00 40.10 1.40
4834 5148 2.755103 GGCTAGCACTGCTGGTTTTATT 59.245 45.455 18.24 0.00 40.10 1.40
4835 5149 3.428045 GGCTAGCACTGCTGGTTTTATTG 60.428 47.826 18.24 0.00 40.10 1.90
4836 5150 3.191371 GCTAGCACTGCTGGTTTTATTGT 59.809 43.478 14.15 0.00 40.10 2.71
4837 5151 4.394920 GCTAGCACTGCTGGTTTTATTGTA 59.605 41.667 14.15 0.00 40.10 2.41
4838 5152 5.066505 GCTAGCACTGCTGGTTTTATTGTAT 59.933 40.000 14.15 0.00 40.10 2.29
4839 5153 6.260050 GCTAGCACTGCTGGTTTTATTGTATA 59.740 38.462 14.15 0.00 40.10 1.47
4840 5154 7.041098 GCTAGCACTGCTGGTTTTATTGTATAT 60.041 37.037 14.15 0.00 40.10 0.86
4841 5155 9.489084 CTAGCACTGCTGGTTTTATTGTATATA 57.511 33.333 14.15 0.00 40.10 0.86
4876 5190 9.671279 TGCTGTACAGTTTACTACATACTACTA 57.329 33.333 23.44 0.00 0.00 1.82
4931 5245 7.111247 ACTACAGTACTATGTCGACTAGTCT 57.889 40.000 22.55 17.78 34.56 3.24
5006 5320 1.399440 TCGTCGACTCGTAATCCTTGG 59.601 52.381 14.70 0.00 0.00 3.61
5007 5321 1.131883 CGTCGACTCGTAATCCTTGGT 59.868 52.381 14.70 0.00 0.00 3.67
5008 5322 2.415090 CGTCGACTCGTAATCCTTGGTT 60.415 50.000 14.70 0.00 0.00 3.67
5009 5323 2.921754 GTCGACTCGTAATCCTTGGTTG 59.078 50.000 8.70 0.00 0.00 3.77
5010 5324 2.094390 TCGACTCGTAATCCTTGGTTGG 60.094 50.000 0.00 0.00 0.00 3.77
5011 5325 2.629051 GACTCGTAATCCTTGGTTGGG 58.371 52.381 0.00 0.00 0.00 4.12
5012 5326 1.339727 ACTCGTAATCCTTGGTTGGGC 60.340 52.381 0.00 0.00 0.00 5.36
5013 5327 0.034863 TCGTAATCCTTGGTTGGGCC 60.035 55.000 0.00 0.00 37.90 5.80
5014 5328 1.373590 CGTAATCCTTGGTTGGGCCG 61.374 60.000 0.00 0.00 41.21 6.13
5015 5329 1.379309 TAATCCTTGGTTGGGCCGC 60.379 57.895 0.00 0.00 41.21 6.53
5016 5330 2.847366 TAATCCTTGGTTGGGCCGCC 62.847 60.000 0.00 0.00 41.21 6.13
5019 5333 4.974721 CTTGGTTGGGCCGCCACT 62.975 66.667 17.70 0.00 41.21 4.00
5020 5334 4.531426 TTGGTTGGGCCGCCACTT 62.531 61.111 17.70 0.00 41.21 3.16
5021 5335 4.531426 TGGTTGGGCCGCCACTTT 62.531 61.111 12.58 0.00 41.21 2.66
5022 5336 3.230990 GGTTGGGCCGCCACTTTT 61.231 61.111 12.58 0.00 0.00 2.27
5023 5337 2.028925 GTTGGGCCGCCACTTTTG 59.971 61.111 12.58 0.00 0.00 2.44
5024 5338 2.443016 TTGGGCCGCCACTTTTGT 60.443 55.556 12.58 0.00 0.00 2.83
5025 5339 2.494530 TTGGGCCGCCACTTTTGTC 61.495 57.895 12.58 0.00 0.00 3.18
5026 5340 3.680786 GGGCCGCCACTTTTGTCC 61.681 66.667 12.58 0.00 0.00 4.02
5027 5341 4.038080 GGCCGCCACTTTTGTCCG 62.038 66.667 3.91 0.00 0.00 4.79
5028 5342 3.284449 GCCGCCACTTTTGTCCGT 61.284 61.111 0.00 0.00 0.00 4.69
5029 5343 2.637025 CCGCCACTTTTGTCCGTG 59.363 61.111 0.00 0.00 0.00 4.94
5030 5344 2.051345 CGCCACTTTTGTCCGTGC 60.051 61.111 0.00 0.00 0.00 5.34
5031 5345 2.335011 GCCACTTTTGTCCGTGCC 59.665 61.111 0.00 0.00 0.00 5.01
5032 5346 2.637025 CCACTTTTGTCCGTGCCG 59.363 61.111 0.00 0.00 0.00 5.69
5033 5347 1.890041 CCACTTTTGTCCGTGCCGA 60.890 57.895 0.00 0.00 0.00 5.54
5034 5348 1.278637 CACTTTTGTCCGTGCCGAC 59.721 57.895 0.00 0.00 0.00 4.79
5035 5349 1.145377 ACTTTTGTCCGTGCCGACT 59.855 52.632 0.00 0.00 33.70 4.18
5036 5350 0.878961 ACTTTTGTCCGTGCCGACTC 60.879 55.000 0.00 0.00 33.70 3.36
5037 5351 0.878523 CTTTTGTCCGTGCCGACTCA 60.879 55.000 0.00 0.00 33.70 3.41
5038 5352 0.462225 TTTTGTCCGTGCCGACTCAA 60.462 50.000 0.00 0.00 33.70 3.02
5039 5353 0.462225 TTTGTCCGTGCCGACTCAAA 60.462 50.000 0.00 0.00 33.70 2.69
5040 5354 1.155424 TTGTCCGTGCCGACTCAAAC 61.155 55.000 0.00 0.00 33.70 2.93
5041 5355 2.355363 TCCGTGCCGACTCAAACG 60.355 61.111 0.00 0.00 35.85 3.60
5048 5362 3.147294 CGACTCAAACGGACGCAG 58.853 61.111 0.00 0.00 0.00 5.18
5049 5363 2.372690 CGACTCAAACGGACGCAGG 61.373 63.158 0.00 0.00 0.00 4.85
5050 5364 2.665185 ACTCAAACGGACGCAGGC 60.665 61.111 0.00 0.00 0.00 4.85
5051 5365 3.777925 CTCAAACGGACGCAGGCG 61.778 66.667 12.71 12.71 46.03 5.52
5054 5368 4.388499 AAACGGACGCAGGCGGAT 62.388 61.111 18.63 0.00 44.69 4.18
5057 5371 4.812476 CGGACGCAGGCGGATGAA 62.812 66.667 18.63 0.00 44.69 2.57
5058 5372 2.892425 GGACGCAGGCGGATGAAG 60.892 66.667 18.63 0.00 44.69 3.02
5059 5373 2.125512 GACGCAGGCGGATGAAGT 60.126 61.111 18.63 0.00 44.69 3.01
5060 5374 2.434884 ACGCAGGCGGATGAAGTG 60.435 61.111 18.63 0.00 44.69 3.16
5061 5375 3.197790 CGCAGGCGGATGAAGTGG 61.198 66.667 5.63 0.00 35.56 4.00
5062 5376 2.825836 GCAGGCGGATGAAGTGGG 60.826 66.667 0.00 0.00 0.00 4.61
5063 5377 2.671070 CAGGCGGATGAAGTGGGT 59.329 61.111 0.00 0.00 0.00 4.51
5064 5378 1.450312 CAGGCGGATGAAGTGGGTC 60.450 63.158 0.00 0.00 0.00 4.46
5065 5379 2.511600 GGCGGATGAAGTGGGTCG 60.512 66.667 0.00 0.00 0.00 4.79
5066 5380 3.195698 GCGGATGAAGTGGGTCGC 61.196 66.667 0.00 0.00 36.51 5.19
5067 5381 2.511600 CGGATGAAGTGGGTCGCC 60.512 66.667 0.00 0.00 0.00 5.54
5068 5382 2.124695 GGATGAAGTGGGTCGCCC 60.125 66.667 7.87 7.87 45.71 6.13
5078 5392 4.415783 GGTCGCCCCATTGAAGTT 57.584 55.556 0.00 0.00 0.00 2.66
5079 5393 1.883021 GGTCGCCCCATTGAAGTTG 59.117 57.895 0.00 0.00 0.00 3.16
5080 5394 1.212751 GTCGCCCCATTGAAGTTGC 59.787 57.895 0.00 0.00 0.00 4.17
5081 5395 1.074775 TCGCCCCATTGAAGTTGCT 59.925 52.632 0.00 0.00 0.00 3.91
5082 5396 0.960364 TCGCCCCATTGAAGTTGCTC 60.960 55.000 0.00 0.00 0.00 4.26
5083 5397 0.962356 CGCCCCATTGAAGTTGCTCT 60.962 55.000 0.00 0.00 0.00 4.09
5084 5398 1.678728 CGCCCCATTGAAGTTGCTCTA 60.679 52.381 0.00 0.00 0.00 2.43
5255 5569 8.161699 TCCAGTTGTTTAGATTCCTTTTGTAC 57.838 34.615 0.00 0.00 0.00 2.90
5316 5639 8.250332 GGATGACTGCCATTATTTTAGTTTGAA 58.750 33.333 0.00 0.00 35.17 2.69
5385 5728 9.527157 TTTGGAATTTTGGATATTACACTGAGA 57.473 29.630 0.00 0.00 0.00 3.27
5386 5729 8.737168 TGGAATTTTGGATATTACACTGAGAG 57.263 34.615 0.00 0.00 0.00 3.20
5387 5730 8.548025 TGGAATTTTGGATATTACACTGAGAGA 58.452 33.333 0.00 0.00 0.00 3.10
5388 5731 8.831550 GGAATTTTGGATATTACACTGAGAGAC 58.168 37.037 0.00 0.00 0.00 3.36
5453 5800 1.634973 TGAGATCATCCCTTTGTGGCA 59.365 47.619 0.00 0.00 0.00 4.92
5540 5887 9.383519 GTTGATCTATCTGAAAGGTGTTGAATA 57.616 33.333 0.00 0.00 0.00 1.75
5640 5987 4.512944 AGCATCATATGTCGCCTTTAGTTG 59.487 41.667 13.24 0.00 0.00 3.16
5718 6186 1.382522 ACTTGGCATGCGACTTATGG 58.617 50.000 12.44 0.00 0.00 2.74
5772 6241 3.264193 TGAAGTTGGGCATGAGATACAGT 59.736 43.478 0.00 0.00 0.00 3.55
5864 6367 2.356135 ACATCACTTTTTCGGGATCGG 58.644 47.619 0.00 0.00 36.95 4.18
5915 6435 7.390440 AGCTGTGCTGTTTTACTGTAATGAATA 59.610 33.333 0.37 0.00 37.57 1.75
6126 6650 1.679680 CTGATGCATGTTAAGCTGGGG 59.320 52.381 2.46 0.00 0.00 4.96
6147 6874 3.412386 GCTAGACTGGGACAACAACAAT 58.588 45.455 0.00 0.00 38.70 2.71
6356 7088 4.397417 GCATGTGCTGTTCCTCTCTAATTT 59.603 41.667 0.00 0.00 38.21 1.82
6366 7098 6.042093 TGTTCCTCTCTAATTTCACTGAGTGT 59.958 38.462 12.93 0.00 34.79 3.55
6368 7100 5.540337 TCCTCTCTAATTTCACTGAGTGTGT 59.460 40.000 12.93 0.00 46.27 3.72
6378 7110 4.068599 TCACTGAGTGTGTGTGTTTTTCA 58.931 39.130 12.93 0.00 46.27 2.69
6382 7114 5.415701 ACTGAGTGTGTGTGTTTTTCATTCT 59.584 36.000 0.00 0.00 0.00 2.40
6384 7116 5.414144 TGAGTGTGTGTGTTTTTCATTCTGA 59.586 36.000 0.00 0.00 0.00 3.27
6599 7331 8.833231 AAAGATGAAGAAGAGAACGATTGTTA 57.167 30.769 0.00 0.00 38.78 2.41
6614 7346 7.414222 ACGATTGTTAACCTATTAGTCCTCA 57.586 36.000 2.48 0.00 0.00 3.86
6636 7368 3.266636 TCTGTTCAACTTTGCTCGTCAA 58.733 40.909 0.00 0.00 0.00 3.18
6655 7387 5.107453 CGTCAATTGTTAGTCTGTTCCTGAC 60.107 44.000 5.13 0.00 33.50 3.51
6683 7415 4.327087 CGAATGCTTAATGTTCTTTTGGCC 59.673 41.667 0.00 0.00 0.00 5.36
6755 7487 4.020485 GTCCTGTCCAGTTACAGTAATGGT 60.020 45.833 15.71 0.00 44.45 3.55
6917 7649 7.084486 GGACAAGATCAACATTCCAGTAAAAC 58.916 38.462 0.00 0.00 0.00 2.43
6931 7663 4.157840 CCAGTAAAACACCCCATTTAGCTC 59.842 45.833 0.00 0.00 0.00 4.09
6932 7664 5.010282 CAGTAAAACACCCCATTTAGCTCT 58.990 41.667 0.00 0.00 0.00 4.09
7074 7807 5.009710 TGTGGTATCGTGATGGAAGATACTC 59.990 44.000 12.61 8.30 42.52 2.59
7118 7851 1.541588 ACCTCGCCTTCAATGCTTTTC 59.458 47.619 0.00 0.00 0.00 2.29
7147 7880 9.862371 TCATCTTCAAACTTGAATCTAGTACTC 57.138 33.333 0.00 0.00 45.26 2.59
7148 7881 9.092876 CATCTTCAAACTTGAATCTAGTACTCC 57.907 37.037 0.00 0.00 45.26 3.85
7149 7882 7.612677 TCTTCAAACTTGAATCTAGTACTCCC 58.387 38.462 0.00 0.00 45.26 4.30
7150 7883 7.455008 TCTTCAAACTTGAATCTAGTACTCCCT 59.545 37.037 0.00 0.00 45.26 4.20
7151 7884 7.171630 TCAAACTTGAATCTAGTACTCCCTC 57.828 40.000 0.00 0.00 33.55 4.30
7152 7885 6.154706 TCAAACTTGAATCTAGTACTCCCTCC 59.845 42.308 0.00 0.00 33.55 4.30
7153 7886 4.208746 ACTTGAATCTAGTACTCCCTCCG 58.791 47.826 0.00 0.00 0.00 4.63
7154 7887 3.947612 TGAATCTAGTACTCCCTCCGT 57.052 47.619 0.00 0.00 0.00 4.69
7155 7888 5.104193 ACTTGAATCTAGTACTCCCTCCGTA 60.104 44.000 0.00 0.00 0.00 4.02
7156 7889 5.378230 TGAATCTAGTACTCCCTCCGTAA 57.622 43.478 0.00 0.00 0.00 3.18
7157 7890 5.759059 TGAATCTAGTACTCCCTCCGTAAA 58.241 41.667 0.00 0.00 0.00 2.01
7158 7891 5.591877 TGAATCTAGTACTCCCTCCGTAAAC 59.408 44.000 0.00 0.00 0.00 2.01
7159 7892 4.851639 TCTAGTACTCCCTCCGTAAACT 57.148 45.455 0.00 0.00 0.00 2.66
7160 7893 5.957771 TCTAGTACTCCCTCCGTAAACTA 57.042 43.478 0.00 0.00 0.00 2.24
7161 7894 6.313519 TCTAGTACTCCCTCCGTAAACTAA 57.686 41.667 0.00 0.00 0.00 2.24
7162 7895 6.904626 TCTAGTACTCCCTCCGTAAACTAAT 58.095 40.000 0.00 0.00 0.00 1.73
7163 7896 8.034313 TCTAGTACTCCCTCCGTAAACTAATA 57.966 38.462 0.00 0.00 0.00 0.98
7164 7897 8.664079 TCTAGTACTCCCTCCGTAAACTAATAT 58.336 37.037 0.00 0.00 0.00 1.28
7165 7898 9.950496 CTAGTACTCCCTCCGTAAACTAATATA 57.050 37.037 0.00 0.00 0.00 0.86
7167 7900 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
7168 7901 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
7169 7902 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
7170 7903 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
7171 7904 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
7172 7905 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
7173 7906 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
7174 7907 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
7175 7908 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
7176 7909 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
7224 7957 9.710818 ACACTCTTATATTAGTTTACAGAGGGA 57.289 33.333 2.59 0.00 34.50 4.20
7226 7959 9.939424 ACTCTTATATTAGTTTACAGAGGGAGT 57.061 33.333 0.00 0.00 32.21 3.85
7283 8016 4.733972 TCGTTTGCATATTTGTGTTCGA 57.266 36.364 0.00 0.00 0.00 3.71
7523 8262 9.932207 ATCATTCATTCTAACAAATTTCAGCAA 57.068 25.926 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 8.577296 TCGAATACTCCATAGAAGATTTCGAAT 58.423 33.333 0.00 0.00 34.02 3.34
93 94 0.185901 TGCAAGGCAGGTTCCTTCTT 59.814 50.000 0.00 0.00 44.24 2.52
162 163 0.556747 GACTCCCTCAGTAGCCCCTA 59.443 60.000 0.00 0.00 34.41 3.53
190 191 1.909287 GGCTATCCGAGGACCCCTC 60.909 68.421 2.97 2.97 46.44 4.30
433 436 8.497910 AGATCATAGATGCTAAACCCTAGAAA 57.502 34.615 0.00 0.00 0.00 2.52
472 475 9.899226 CTCGTGATGATATGAGTATTACAAGAA 57.101 33.333 0.00 0.00 0.00 2.52
495 498 4.142138 ACCTACTTCCTACTTGATTGCTCG 60.142 45.833 0.00 0.00 0.00 5.03
498 501 9.043079 GTAATAACCTACTTCCTACTTGATTGC 57.957 37.037 0.00 0.00 0.00 3.56
566 569 1.133790 GTGGATAGTAACACGAGGCGT 59.866 52.381 0.00 0.00 42.36 5.68
573 576 4.142315 TGCGTCTAAGGTGGATAGTAACAC 60.142 45.833 0.00 0.00 36.89 3.32
580 583 1.136305 GCTGTGCGTCTAAGGTGGATA 59.864 52.381 0.00 0.00 0.00 2.59
585 588 1.213013 CGAGCTGTGCGTCTAAGGT 59.787 57.895 0.00 0.00 0.00 3.50
668 671 0.855349 CTCCGTCGCTGATATGCAAC 59.145 55.000 0.00 0.00 0.00 4.17
669 672 0.875908 GCTCCGTCGCTGATATGCAA 60.876 55.000 0.00 0.00 0.00 4.08
679 682 2.434185 TTGATGTGGCTCCGTCGC 60.434 61.111 0.00 0.00 0.00 5.19
683 686 3.805267 GAGCTTGATGTGGCTCCG 58.195 61.111 3.87 0.00 46.32 4.63
690 693 2.094286 CCTTCTCACTCGAGCTTGATGT 60.094 50.000 13.61 2.28 39.30 3.06
692 695 2.094286 CACCTTCTCACTCGAGCTTGAT 60.094 50.000 13.61 0.00 39.30 2.57
745 748 1.746615 CCTGTCTCCGGCACCATTG 60.747 63.158 0.00 0.00 0.00 2.82
746 749 2.185310 GACCTGTCTCCGGCACCATT 62.185 60.000 0.00 0.00 0.00 3.16
747 750 2.607750 ACCTGTCTCCGGCACCAT 60.608 61.111 0.00 0.00 0.00 3.55
759 762 2.111043 CCAACGCCAGTGACCTGT 59.889 61.111 0.00 0.00 36.95 4.00
765 768 1.648720 CTTGACACCAACGCCAGTG 59.351 57.895 0.00 0.00 39.93 3.66
766 769 2.186826 GCTTGACACCAACGCCAGT 61.187 57.895 0.00 0.00 0.00 4.00
768 771 3.276091 CGCTTGACACCAACGCCA 61.276 61.111 0.00 0.00 0.00 5.69
787 790 2.890808 AAAGACAGCAGAACGTCTCA 57.109 45.000 0.00 0.00 41.60 3.27
808 811 8.349245 CACATAAAGACCAACATGACAAAACTA 58.651 33.333 0.00 0.00 0.00 2.24
1163 1171 2.122989 GGTGGGAGGATAGGGCGA 60.123 66.667 0.00 0.00 0.00 5.54
1215 1223 1.302949 CTGCGAATGGGAAAGGGGA 59.697 57.895 0.00 0.00 0.00 4.81
1396 1404 1.203441 TCCACTCCTGGCTTGCTGAT 61.203 55.000 0.00 0.00 37.49 2.90
1491 1499 0.866061 CAGGGAACGCGTGATACGAG 60.866 60.000 14.98 4.49 46.05 4.18
1590 1598 9.574577 TCCCTCCCTAATATACATAACATCATT 57.425 33.333 0.00 0.00 0.00 2.57
1597 1605 7.906736 AGAATGCTCCCTCCCTAATATACATAA 59.093 37.037 0.00 0.00 0.00 1.90
1606 1614 2.568546 TCAGAATGCTCCCTCCCTAA 57.431 50.000 0.00 0.00 34.76 2.69
1607 1615 2.568546 TTCAGAATGCTCCCTCCCTA 57.431 50.000 0.00 0.00 34.76 3.53
1609 1617 2.744352 AATTCAGAATGCTCCCTCCC 57.256 50.000 0.00 0.00 34.76 4.30
1611 1619 5.126061 TGCTTTTAATTCAGAATGCTCCCTC 59.874 40.000 0.00 0.00 34.76 4.30
1612 1620 5.018809 TGCTTTTAATTCAGAATGCTCCCT 58.981 37.500 0.00 0.00 34.76 4.20
1613 1621 5.329035 TGCTTTTAATTCAGAATGCTCCC 57.671 39.130 0.00 0.00 34.76 4.30
1614 1622 5.126061 TCCTGCTTTTAATTCAGAATGCTCC 59.874 40.000 0.00 0.00 34.76 4.70
1621 1701 7.523293 TTCATGTTCCTGCTTTTAATTCAGA 57.477 32.000 0.00 0.00 0.00 3.27
1790 1874 4.975147 TCCTATGAATCAAAGAGGCCCTTA 59.025 41.667 0.00 0.00 34.00 2.69
1791 1875 3.788142 TCCTATGAATCAAAGAGGCCCTT 59.212 43.478 0.00 0.00 36.47 3.95
1792 1876 3.397527 TCCTATGAATCAAAGAGGCCCT 58.602 45.455 0.00 0.00 0.00 5.19
1793 1877 3.864789 TCCTATGAATCAAAGAGGCCC 57.135 47.619 0.00 0.00 0.00 5.80
1794 1878 6.322201 TCAAAATCCTATGAATCAAAGAGGCC 59.678 38.462 0.00 0.00 0.00 5.19
1795 1879 7.338800 TCAAAATCCTATGAATCAAAGAGGC 57.661 36.000 4.80 0.00 0.00 4.70
1798 1882 9.624697 CGTTTTCAAAATCCTATGAATCAAAGA 57.375 29.630 0.00 0.00 35.63 2.52
1799 1883 9.410556 ACGTTTTCAAAATCCTATGAATCAAAG 57.589 29.630 0.00 0.00 35.63 2.77
1802 1886 8.673711 CCTACGTTTTCAAAATCCTATGAATCA 58.326 33.333 0.00 0.00 35.63 2.57
1803 1887 8.889717 TCCTACGTTTTCAAAATCCTATGAATC 58.110 33.333 0.00 0.00 35.63 2.52
1804 1888 8.801882 TCCTACGTTTTCAAAATCCTATGAAT 57.198 30.769 0.00 0.00 35.63 2.57
1805 1889 8.624367 TTCCTACGTTTTCAAAATCCTATGAA 57.376 30.769 0.00 0.00 33.93 2.57
1806 1890 8.801882 ATTCCTACGTTTTCAAAATCCTATGA 57.198 30.769 0.00 0.00 0.00 2.15
1808 1892 9.338622 CCTATTCCTACGTTTTCAAAATCCTAT 57.661 33.333 0.00 0.00 0.00 2.57
1809 1893 8.542080 TCCTATTCCTACGTTTTCAAAATCCTA 58.458 33.333 0.00 0.00 0.00 2.94
1810 1894 7.399634 TCCTATTCCTACGTTTTCAAAATCCT 58.600 34.615 0.00 0.00 0.00 3.24
1811 1895 7.619964 TCCTATTCCTACGTTTTCAAAATCC 57.380 36.000 0.00 0.00 0.00 3.01
1812 1896 9.902196 TTTTCCTATTCCTACGTTTTCAAAATC 57.098 29.630 0.00 0.00 0.00 2.17
1813 1897 9.908152 CTTTTCCTATTCCTACGTTTTCAAAAT 57.092 29.630 0.00 0.00 0.00 1.82
1814 1898 8.905850 ACTTTTCCTATTCCTACGTTTTCAAAA 58.094 29.630 0.00 0.00 0.00 2.44
1815 1899 8.347035 CACTTTTCCTATTCCTACGTTTTCAAA 58.653 33.333 0.00 0.00 0.00 2.69
1816 1900 7.499895 ACACTTTTCCTATTCCTACGTTTTCAA 59.500 33.333 0.00 0.00 0.00 2.69
1817 1901 6.993902 ACACTTTTCCTATTCCTACGTTTTCA 59.006 34.615 0.00 0.00 0.00 2.69
1818 1902 7.430992 ACACTTTTCCTATTCCTACGTTTTC 57.569 36.000 0.00 0.00 0.00 2.29
1819 1903 7.605309 CCTACACTTTTCCTATTCCTACGTTTT 59.395 37.037 0.00 0.00 0.00 2.43
1820 1904 7.101700 CCTACACTTTTCCTATTCCTACGTTT 58.898 38.462 0.00 0.00 0.00 3.60
1821 1905 6.351626 CCCTACACTTTTCCTATTCCTACGTT 60.352 42.308 0.00 0.00 0.00 3.99
1822 1906 5.128335 CCCTACACTTTTCCTATTCCTACGT 59.872 44.000 0.00 0.00 0.00 3.57
1823 1907 5.128335 ACCCTACACTTTTCCTATTCCTACG 59.872 44.000 0.00 0.00 0.00 3.51
1824 1908 6.556974 ACCCTACACTTTTCCTATTCCTAC 57.443 41.667 0.00 0.00 0.00 3.18
1825 1909 6.069847 CCAACCCTACACTTTTCCTATTCCTA 60.070 42.308 0.00 0.00 0.00 2.94
1826 1910 5.281037 CCAACCCTACACTTTTCCTATTCCT 60.281 44.000 0.00 0.00 0.00 3.36
1827 1911 4.948004 CCAACCCTACACTTTTCCTATTCC 59.052 45.833 0.00 0.00 0.00 3.01
1828 1912 5.812286 TCCAACCCTACACTTTTCCTATTC 58.188 41.667 0.00 0.00 0.00 1.75
1829 1913 5.312443 ACTCCAACCCTACACTTTTCCTATT 59.688 40.000 0.00 0.00 0.00 1.73
1830 1914 4.850386 ACTCCAACCCTACACTTTTCCTAT 59.150 41.667 0.00 0.00 0.00 2.57
1831 1915 4.041198 CACTCCAACCCTACACTTTTCCTA 59.959 45.833 0.00 0.00 0.00 2.94
1832 1916 3.053826 ACTCCAACCCTACACTTTTCCT 58.946 45.455 0.00 0.00 0.00 3.36
1833 1917 3.146847 CACTCCAACCCTACACTTTTCC 58.853 50.000 0.00 0.00 0.00 3.13
1834 1918 3.146847 CCACTCCAACCCTACACTTTTC 58.853 50.000 0.00 0.00 0.00 2.29
1835 1919 2.751816 GCCACTCCAACCCTACACTTTT 60.752 50.000 0.00 0.00 0.00 2.27
1836 1920 1.202891 GCCACTCCAACCCTACACTTT 60.203 52.381 0.00 0.00 0.00 2.66
1837 1921 0.400594 GCCACTCCAACCCTACACTT 59.599 55.000 0.00 0.00 0.00 3.16
1838 1922 0.766674 TGCCACTCCAACCCTACACT 60.767 55.000 0.00 0.00 0.00 3.55
1839 1923 0.109723 TTGCCACTCCAACCCTACAC 59.890 55.000 0.00 0.00 0.00 2.90
1840 1924 1.072266 ATTGCCACTCCAACCCTACA 58.928 50.000 0.00 0.00 0.00 2.74
1841 1925 1.463674 CATTGCCACTCCAACCCTAC 58.536 55.000 0.00 0.00 0.00 3.18
1842 1926 0.323360 GCATTGCCACTCCAACCCTA 60.323 55.000 0.00 0.00 0.00 3.53
1843 1927 1.607467 GCATTGCCACTCCAACCCT 60.607 57.895 0.00 0.00 0.00 4.34
1844 1928 2.973082 GCATTGCCACTCCAACCC 59.027 61.111 0.00 0.00 0.00 4.11
1855 1939 2.994186 AGGATTCAAATGGGCATTGC 57.006 45.000 0.00 0.00 0.00 3.56
1856 1940 7.528996 TTCTATAGGATTCAAATGGGCATTG 57.471 36.000 0.00 0.00 0.00 2.82
1857 1941 8.731591 AATTCTATAGGATTCAAATGGGCATT 57.268 30.769 0.00 0.00 0.00 3.56
1858 1942 9.471702 CTAATTCTATAGGATTCAAATGGGCAT 57.528 33.333 9.67 0.00 0.00 4.40
1859 1943 7.394359 GCTAATTCTATAGGATTCAAATGGGCA 59.606 37.037 9.67 0.00 0.00 5.36
1860 1944 7.394359 TGCTAATTCTATAGGATTCAAATGGGC 59.606 37.037 9.67 5.60 0.00 5.36
1861 1945 8.868522 TGCTAATTCTATAGGATTCAAATGGG 57.131 34.615 9.67 0.00 0.00 4.00
1862 1946 9.730705 TCTGCTAATTCTATAGGATTCAAATGG 57.269 33.333 9.67 0.00 0.00 3.16
1877 1961 8.237267 CCTACGTTTTCAAAATCTGCTAATTCT 58.763 33.333 0.00 0.00 0.00 2.40
1878 1962 8.234546 TCCTACGTTTTCAAAATCTGCTAATTC 58.765 33.333 0.00 0.00 0.00 2.17
1879 1963 8.106247 TCCTACGTTTTCAAAATCTGCTAATT 57.894 30.769 0.00 0.00 0.00 1.40
1880 1964 7.681939 TCCTACGTTTTCAAAATCTGCTAAT 57.318 32.000 0.00 0.00 0.00 1.73
1881 1965 7.499321 TTCCTACGTTTTCAAAATCTGCTAA 57.501 32.000 0.00 0.00 0.00 3.09
1882 1966 7.681939 ATTCCTACGTTTTCAAAATCTGCTA 57.318 32.000 0.00 0.00 0.00 3.49
1883 1967 6.575162 ATTCCTACGTTTTCAAAATCTGCT 57.425 33.333 0.00 0.00 0.00 4.24
1884 1968 6.967199 CCTATTCCTACGTTTTCAAAATCTGC 59.033 38.462 0.00 0.00 0.00 4.26
1885 1969 8.263940 TCCTATTCCTACGTTTTCAAAATCTG 57.736 34.615 0.00 0.00 0.00 2.90
1886 1970 8.857694 TTCCTATTCCTACGTTTTCAAAATCT 57.142 30.769 0.00 0.00 0.00 2.40
1887 1971 9.902196 TTTTCCTATTCCTACGTTTTCAAAATC 57.098 29.630 0.00 0.00 0.00 2.17
1888 1972 9.908152 CTTTTCCTATTCCTACGTTTTCAAAAT 57.092 29.630 0.00 0.00 0.00 1.82
1889 1973 8.905850 ACTTTTCCTATTCCTACGTTTTCAAAA 58.094 29.630 0.00 0.00 0.00 2.44
1890 1974 8.347035 CACTTTTCCTATTCCTACGTTTTCAAA 58.653 33.333 0.00 0.00 0.00 2.69
1891 1975 7.499895 ACACTTTTCCTATTCCTACGTTTTCAA 59.500 33.333 0.00 0.00 0.00 2.69
1892 1976 6.993902 ACACTTTTCCTATTCCTACGTTTTCA 59.006 34.615 0.00 0.00 0.00 2.69
1893 1977 7.430992 ACACTTTTCCTATTCCTACGTTTTC 57.569 36.000 0.00 0.00 0.00 2.29
1894 1978 7.605309 CCTACACTTTTCCTATTCCTACGTTTT 59.395 37.037 0.00 0.00 0.00 2.43
1895 1979 7.101700 CCTACACTTTTCCTATTCCTACGTTT 58.898 38.462 0.00 0.00 0.00 3.60
1896 1980 6.351626 CCCTACACTTTTCCTATTCCTACGTT 60.352 42.308 0.00 0.00 0.00 3.99
1897 1981 5.128335 CCCTACACTTTTCCTATTCCTACGT 59.872 44.000 0.00 0.00 0.00 3.57
1898 1982 5.128335 ACCCTACACTTTTCCTATTCCTACG 59.872 44.000 0.00 0.00 0.00 3.51
1899 1983 6.556974 ACCCTACACTTTTCCTATTCCTAC 57.443 41.667 0.00 0.00 0.00 3.18
1900 1984 6.069847 CCAACCCTACACTTTTCCTATTCCTA 60.070 42.308 0.00 0.00 0.00 2.94
1901 1985 5.281037 CCAACCCTACACTTTTCCTATTCCT 60.281 44.000 0.00 0.00 0.00 3.36
1902 1986 4.948004 CCAACCCTACACTTTTCCTATTCC 59.052 45.833 0.00 0.00 0.00 3.01
1903 1987 5.812286 TCCAACCCTACACTTTTCCTATTC 58.188 41.667 0.00 0.00 0.00 1.75
1904 1988 5.312443 ACTCCAACCCTACACTTTTCCTATT 59.688 40.000 0.00 0.00 0.00 1.73
1905 1989 4.850386 ACTCCAACCCTACACTTTTCCTAT 59.150 41.667 0.00 0.00 0.00 2.57
1906 1990 4.041198 CACTCCAACCCTACACTTTTCCTA 59.959 45.833 0.00 0.00 0.00 2.94
1907 1991 3.053826 ACTCCAACCCTACACTTTTCCT 58.946 45.455 0.00 0.00 0.00 3.36
1908 1992 3.146847 CACTCCAACCCTACACTTTTCC 58.853 50.000 0.00 0.00 0.00 3.13
1909 1993 3.146847 CCACTCCAACCCTACACTTTTC 58.853 50.000 0.00 0.00 0.00 2.29
1910 1994 2.751816 GCCACTCCAACCCTACACTTTT 60.752 50.000 0.00 0.00 0.00 2.27
1911 1995 1.202891 GCCACTCCAACCCTACACTTT 60.203 52.381 0.00 0.00 0.00 2.66
1912 1996 0.400594 GCCACTCCAACCCTACACTT 59.599 55.000 0.00 0.00 0.00 3.16
1913 1997 0.766674 TGCCACTCCAACCCTACACT 60.767 55.000 0.00 0.00 0.00 3.55
1914 1998 0.109723 TTGCCACTCCAACCCTACAC 59.890 55.000 0.00 0.00 0.00 2.90
1915 1999 1.072266 ATTGCCACTCCAACCCTACA 58.928 50.000 0.00 0.00 0.00 2.74
1916 2000 1.463674 CATTGCCACTCCAACCCTAC 58.536 55.000 0.00 0.00 0.00 3.18
1917 2001 0.323360 GCATTGCCACTCCAACCCTA 60.323 55.000 0.00 0.00 0.00 3.53
1918 2002 1.607467 GCATTGCCACTCCAACCCT 60.607 57.895 0.00 0.00 0.00 4.34
1919 2003 2.973082 GCATTGCCACTCCAACCC 59.027 61.111 0.00 0.00 0.00 4.11
1930 2014 2.994186 AGGATTCAAATGGGCATTGC 57.006 45.000 0.00 0.00 0.00 3.56
1931 2015 7.528996 TTCTATAGGATTCAAATGGGCATTG 57.471 36.000 0.00 0.00 0.00 2.82
1932 2016 8.731591 AATTCTATAGGATTCAAATGGGCATT 57.268 30.769 0.00 0.00 0.00 3.56
1933 2017 9.471702 CTAATTCTATAGGATTCAAATGGGCAT 57.528 33.333 9.67 0.00 0.00 4.40
1934 2018 7.394359 GCTAATTCTATAGGATTCAAATGGGCA 59.606 37.037 9.67 0.00 0.00 5.36
1935 2019 7.394359 TGCTAATTCTATAGGATTCAAATGGGC 59.606 37.037 9.67 5.60 0.00 5.36
1936 2020 8.868522 TGCTAATTCTATAGGATTCAAATGGG 57.131 34.615 9.67 0.00 0.00 4.00
1952 2036 8.525316 TGACATCAAACAATCATTGCTAATTCT 58.475 29.630 0.00 0.00 0.00 2.40
1953 2037 8.589629 GTGACATCAAACAATCATTGCTAATTC 58.410 33.333 0.00 0.00 0.00 2.17
1954 2038 7.274033 CGTGACATCAAACAATCATTGCTAATT 59.726 33.333 0.00 0.00 0.00 1.40
1955 2039 6.748658 CGTGACATCAAACAATCATTGCTAAT 59.251 34.615 0.00 0.00 0.00 1.73
1956 2040 6.085573 CGTGACATCAAACAATCATTGCTAA 58.914 36.000 0.00 0.00 0.00 3.09
1957 2041 5.391843 CCGTGACATCAAACAATCATTGCTA 60.392 40.000 0.00 0.00 0.00 3.49
1958 2042 4.478699 CGTGACATCAAACAATCATTGCT 58.521 39.130 0.00 0.00 0.00 3.91
1959 2043 3.609373 CCGTGACATCAAACAATCATTGC 59.391 43.478 0.00 0.00 0.00 3.56
1960 2044 4.082841 TCCCGTGACATCAAACAATCATTG 60.083 41.667 0.00 0.00 0.00 2.82
1961 2045 4.078537 TCCCGTGACATCAAACAATCATT 58.921 39.130 0.00 0.00 0.00 2.57
1962 2046 3.684908 TCCCGTGACATCAAACAATCAT 58.315 40.909 0.00 0.00 0.00 2.45
1963 2047 3.133141 TCCCGTGACATCAAACAATCA 57.867 42.857 0.00 0.00 0.00 2.57
1964 2048 4.497473 TTTCCCGTGACATCAAACAATC 57.503 40.909 0.00 0.00 0.00 2.67
1965 2049 4.927978 TTTTCCCGTGACATCAAACAAT 57.072 36.364 0.00 0.00 0.00 2.71
1966 2050 4.082190 TGTTTTTCCCGTGACATCAAACAA 60.082 37.500 0.00 0.00 31.47 2.83
1967 2051 3.444034 TGTTTTTCCCGTGACATCAAACA 59.556 39.130 0.00 0.00 31.84 2.83
1968 2052 4.035278 TGTTTTTCCCGTGACATCAAAC 57.965 40.909 0.00 0.00 0.00 2.93
1969 2053 4.720649 TTGTTTTTCCCGTGACATCAAA 57.279 36.364 0.00 0.00 0.00 2.69
1970 2054 4.440802 CCTTTGTTTTTCCCGTGACATCAA 60.441 41.667 0.00 0.00 0.00 2.57
1971 2055 3.067461 CCTTTGTTTTTCCCGTGACATCA 59.933 43.478 0.00 0.00 0.00 3.07
1972 2056 3.316868 TCCTTTGTTTTTCCCGTGACATC 59.683 43.478 0.00 0.00 0.00 3.06
1973 2057 3.292460 TCCTTTGTTTTTCCCGTGACAT 58.708 40.909 0.00 0.00 0.00 3.06
1974 2058 2.724454 TCCTTTGTTTTTCCCGTGACA 58.276 42.857 0.00 0.00 0.00 3.58
1975 2059 3.786516 TTCCTTTGTTTTTCCCGTGAC 57.213 42.857 0.00 0.00 0.00 3.67
1976 2060 4.160626 ACAATTCCTTTGTTTTTCCCGTGA 59.839 37.500 0.00 0.00 46.51 4.35
1977 2061 4.438148 ACAATTCCTTTGTTTTTCCCGTG 58.562 39.130 0.00 0.00 46.51 4.94
1978 2062 4.746535 ACAATTCCTTTGTTTTTCCCGT 57.253 36.364 0.00 0.00 46.51 5.28
1979 2063 7.541122 TTTTACAATTCCTTTGTTTTTCCCG 57.459 32.000 0.00 0.00 46.51 5.14
1980 2064 9.168451 TCTTTTTACAATTCCTTTGTTTTTCCC 57.832 29.630 0.00 0.00 46.51 3.97
1983 2067 9.733556 ACCTCTTTTTACAATTCCTTTGTTTTT 57.266 25.926 0.00 0.00 46.51 1.94
1984 2068 9.733556 AACCTCTTTTTACAATTCCTTTGTTTT 57.266 25.926 0.00 0.00 46.51 2.43
1985 2069 9.161629 CAACCTCTTTTTACAATTCCTTTGTTT 57.838 29.630 0.00 0.00 46.51 2.83
1986 2070 7.768582 CCAACCTCTTTTTACAATTCCTTTGTT 59.231 33.333 0.00 0.00 46.51 2.83
1988 2072 7.496747 TCCAACCTCTTTTTACAATTCCTTTG 58.503 34.615 0.00 0.00 41.36 2.77
1989 2073 7.344612 ACTCCAACCTCTTTTTACAATTCCTTT 59.655 33.333 0.00 0.00 0.00 3.11
1990 2074 6.839134 ACTCCAACCTCTTTTTACAATTCCTT 59.161 34.615 0.00 0.00 0.00 3.36
1991 2075 6.265422 CACTCCAACCTCTTTTTACAATTCCT 59.735 38.462 0.00 0.00 0.00 3.36
1992 2076 6.447162 CACTCCAACCTCTTTTTACAATTCC 58.553 40.000 0.00 0.00 0.00 3.01
1993 2077 6.264518 TCCACTCCAACCTCTTTTTACAATTC 59.735 38.462 0.00 0.00 0.00 2.17
1994 2078 6.133356 TCCACTCCAACCTCTTTTTACAATT 58.867 36.000 0.00 0.00 0.00 2.32
1995 2079 5.701224 TCCACTCCAACCTCTTTTTACAAT 58.299 37.500 0.00 0.00 0.00 2.71
1996 2080 5.118729 TCCACTCCAACCTCTTTTTACAA 57.881 39.130 0.00 0.00 0.00 2.41
1997 2081 4.781775 TCCACTCCAACCTCTTTTTACA 57.218 40.909 0.00 0.00 0.00 2.41
1998 2082 5.070685 ACATCCACTCCAACCTCTTTTTAC 58.929 41.667 0.00 0.00 0.00 2.01
1999 2083 5.319043 ACATCCACTCCAACCTCTTTTTA 57.681 39.130 0.00 0.00 0.00 1.52
2000 2084 4.184649 ACATCCACTCCAACCTCTTTTT 57.815 40.909 0.00 0.00 0.00 1.94
2001 2085 3.884037 ACATCCACTCCAACCTCTTTT 57.116 42.857 0.00 0.00 0.00 2.27
2002 2086 3.884037 AACATCCACTCCAACCTCTTT 57.116 42.857 0.00 0.00 0.00 2.52
2003 2087 4.993705 TTAACATCCACTCCAACCTCTT 57.006 40.909 0.00 0.00 0.00 2.85
2004 2088 4.993705 TTTAACATCCACTCCAACCTCT 57.006 40.909 0.00 0.00 0.00 3.69
2005 2089 6.350194 GGAAATTTAACATCCACTCCAACCTC 60.350 42.308 0.00 0.00 33.30 3.85
2006 2090 5.480422 GGAAATTTAACATCCACTCCAACCT 59.520 40.000 0.00 0.00 33.30 3.50
2007 2091 5.480422 AGGAAATTTAACATCCACTCCAACC 59.520 40.000 0.00 0.00 35.62 3.77
2008 2092 6.590234 AGGAAATTTAACATCCACTCCAAC 57.410 37.500 0.00 0.00 35.62 3.77
2009 2093 8.112822 TCATAGGAAATTTAACATCCACTCCAA 58.887 33.333 0.00 0.00 35.62 3.53
2010 2094 7.638444 TCATAGGAAATTTAACATCCACTCCA 58.362 34.615 0.00 0.00 35.62 3.86
2011 2095 8.519799 TTCATAGGAAATTTAACATCCACTCC 57.480 34.615 0.00 0.00 35.62 3.85
2068 2152 7.580007 TGATTCATATGATTGGATCCCATAGG 58.420 38.462 9.90 11.47 31.55 2.57
2069 2153 9.470399 TTTGATTCATATGATTGGATCCCATAG 57.530 33.333 9.90 4.88 31.55 2.23
2070 2154 9.470399 CTTTGATTCATATGATTGGATCCCATA 57.530 33.333 9.90 10.27 31.55 2.74
2071 2155 7.399191 CCTTTGATTCATATGATTGGATCCCAT 59.601 37.037 9.90 2.97 31.55 4.00
2072 2156 6.722590 CCTTTGATTCATATGATTGGATCCCA 59.277 38.462 9.90 0.00 31.55 4.37
2073 2157 6.950041 TCCTTTGATTCATATGATTGGATCCC 59.050 38.462 9.90 0.00 31.55 3.85
2074 2158 7.094032 GGTCCTTTGATTCATATGATTGGATCC 60.094 40.741 6.17 4.20 31.55 3.36
2075 2159 7.449395 TGGTCCTTTGATTCATATGATTGGATC 59.551 37.037 6.17 7.17 32.97 3.36
2076 2160 7.299896 TGGTCCTTTGATTCATATGATTGGAT 58.700 34.615 6.17 0.00 0.00 3.41
2077 2161 6.671605 TGGTCCTTTGATTCATATGATTGGA 58.328 36.000 6.17 3.59 0.00 3.53
2078 2162 6.964807 TGGTCCTTTGATTCATATGATTGG 57.035 37.500 6.17 1.25 0.00 3.16
2079 2163 7.774134 TGTTGGTCCTTTGATTCATATGATTG 58.226 34.615 6.17 0.00 0.00 2.67
2080 2164 7.959658 TGTTGGTCCTTTGATTCATATGATT 57.040 32.000 6.17 2.68 0.00 2.57
2081 2165 9.293404 CTATGTTGGTCCTTTGATTCATATGAT 57.707 33.333 6.17 0.00 0.00 2.45
2082 2166 7.720957 CCTATGTTGGTCCTTTGATTCATATGA 59.279 37.037 0.00 0.00 0.00 2.15
2083 2167 7.720957 TCCTATGTTGGTCCTTTGATTCATATG 59.279 37.037 0.00 0.00 0.00 1.78
2084 2168 7.815383 TCCTATGTTGGTCCTTTGATTCATAT 58.185 34.615 0.00 0.00 0.00 1.78
2085 2169 7.206789 TCCTATGTTGGTCCTTTGATTCATA 57.793 36.000 0.00 0.00 0.00 2.15
2086 2170 6.078456 TCCTATGTTGGTCCTTTGATTCAT 57.922 37.500 0.00 0.00 0.00 2.57
2087 2171 5.512942 TCCTATGTTGGTCCTTTGATTCA 57.487 39.130 0.00 0.00 0.00 2.57
2088 2172 6.834168 TTTCCTATGTTGGTCCTTTGATTC 57.166 37.500 0.00 0.00 0.00 2.52
2089 2173 7.610580 TTTTTCCTATGTTGGTCCTTTGATT 57.389 32.000 0.00 0.00 0.00 2.57
2110 2194 9.325248 TGGAGGATTGAAATTCTTAGGATTTTT 57.675 29.630 0.00 0.00 0.00 1.94
2111 2195 8.899887 TGGAGGATTGAAATTCTTAGGATTTT 57.100 30.769 0.00 0.00 0.00 1.82
2112 2196 8.339247 TCTGGAGGATTGAAATTCTTAGGATTT 58.661 33.333 0.00 0.00 0.00 2.17
2113 2197 7.876371 TCTGGAGGATTGAAATTCTTAGGATT 58.124 34.615 0.00 0.00 0.00 3.01
2114 2198 7.457380 TCTGGAGGATTGAAATTCTTAGGAT 57.543 36.000 0.00 0.00 0.00 3.24
2115 2199 6.891306 TCTGGAGGATTGAAATTCTTAGGA 57.109 37.500 0.00 0.00 0.00 2.94
2116 2200 7.944729 TTTCTGGAGGATTGAAATTCTTAGG 57.055 36.000 0.00 0.00 0.00 2.69
2117 2201 8.628280 GGATTTCTGGAGGATTGAAATTCTTAG 58.372 37.037 0.00 0.00 39.56 2.18
2118 2202 8.339247 AGGATTTCTGGAGGATTGAAATTCTTA 58.661 33.333 0.00 0.00 40.92 2.10
2119 2203 7.187676 AGGATTTCTGGAGGATTGAAATTCTT 58.812 34.615 0.00 0.00 40.92 2.52
2120 2204 6.739664 AGGATTTCTGGAGGATTGAAATTCT 58.260 36.000 0.00 0.00 39.71 2.40
2121 2205 8.703378 ATAGGATTTCTGGAGGATTGAAATTC 57.297 34.615 0.00 0.00 39.56 2.17
2124 2208 9.989296 TTTTATAGGATTTCTGGAGGATTGAAA 57.011 29.630 0.00 0.00 34.75 2.69
2128 2212 9.593565 GGAATTTTATAGGATTTCTGGAGGATT 57.406 33.333 0.00 0.00 0.00 3.01
2129 2213 8.964351 AGGAATTTTATAGGATTTCTGGAGGAT 58.036 33.333 0.00 0.00 0.00 3.24
2130 2214 8.350180 AGGAATTTTATAGGATTTCTGGAGGA 57.650 34.615 0.00 0.00 0.00 3.71
2131 2215 9.426534 AAAGGAATTTTATAGGATTTCTGGAGG 57.573 33.333 0.00 0.00 0.00 4.30
2133 2217 9.989296 TCAAAGGAATTTTATAGGATTTCTGGA 57.011 29.630 0.00 0.00 0.00 3.86
2155 2239 7.560368 TGTTTTTAGGGCTTCTTTGATTCAAA 58.440 30.769 11.19 11.19 0.00 2.69
2156 2240 7.118496 TGTTTTTAGGGCTTCTTTGATTCAA 57.882 32.000 0.00 0.00 0.00 2.69
2157 2241 6.723298 TGTTTTTAGGGCTTCTTTGATTCA 57.277 33.333 0.00 0.00 0.00 2.57
2158 2242 7.378181 TCATGTTTTTAGGGCTTCTTTGATTC 58.622 34.615 0.00 0.00 0.00 2.52
2159 2243 7.301868 TCATGTTTTTAGGGCTTCTTTGATT 57.698 32.000 0.00 0.00 0.00 2.57
2160 2244 6.916360 TCATGTTTTTAGGGCTTCTTTGAT 57.084 33.333 0.00 0.00 0.00 2.57
2161 2245 6.723298 TTCATGTTTTTAGGGCTTCTTTGA 57.277 33.333 0.00 0.00 0.00 2.69
2162 2246 6.591448 GGATTCATGTTTTTAGGGCTTCTTTG 59.409 38.462 0.00 0.00 0.00 2.77
2163 2247 6.572314 CGGATTCATGTTTTTAGGGCTTCTTT 60.572 38.462 0.00 0.00 0.00 2.52
2164 2248 5.105756 CGGATTCATGTTTTTAGGGCTTCTT 60.106 40.000 0.00 0.00 0.00 2.52
2165 2249 4.399303 CGGATTCATGTTTTTAGGGCTTCT 59.601 41.667 0.00 0.00 0.00 2.85
2166 2250 4.398044 TCGGATTCATGTTTTTAGGGCTTC 59.602 41.667 0.00 0.00 0.00 3.86
2167 2251 4.340617 TCGGATTCATGTTTTTAGGGCTT 58.659 39.130 0.00 0.00 0.00 4.35
2168 2252 3.963129 TCGGATTCATGTTTTTAGGGCT 58.037 40.909 0.00 0.00 0.00 5.19
2169 2253 4.918810 ATCGGATTCATGTTTTTAGGGC 57.081 40.909 0.00 0.00 0.00 5.19
2170 2254 6.296026 TCCTATCGGATTCATGTTTTTAGGG 58.704 40.000 0.00 0.00 33.30 3.53
2171 2255 7.801716 TTCCTATCGGATTCATGTTTTTAGG 57.198 36.000 0.00 0.00 39.58 2.69
2172 2256 9.056005 TCATTCCTATCGGATTCATGTTTTTAG 57.944 33.333 0.00 0.00 39.58 1.85
2186 2270 4.576053 TGATTTGCACTTCATTCCTATCGG 59.424 41.667 0.00 0.00 0.00 4.18
2202 2286 5.689383 TGTAAAGAAGTCCTGTGATTTGC 57.311 39.130 0.00 0.00 0.00 3.68
2339 2423 5.419155 CGGATAGATTTCCTATGCTCCAGTA 59.581 44.000 0.00 0.00 42.12 2.74
2445 2529 9.143155 AGTCACCCTTTGTATTGTAAGATTTTT 57.857 29.630 0.00 0.00 0.00 1.94
2446 2530 8.576442 CAGTCACCCTTTGTATTGTAAGATTTT 58.424 33.333 0.00 0.00 0.00 1.82
2447 2531 7.942341 TCAGTCACCCTTTGTATTGTAAGATTT 59.058 33.333 0.00 0.00 0.00 2.17
2448 2532 7.390718 GTCAGTCACCCTTTGTATTGTAAGATT 59.609 37.037 0.00 0.00 0.00 2.40
2490 2574 3.582164 ACAGACTCTCCCCAGATAATCC 58.418 50.000 0.00 0.00 0.00 3.01
2491 2575 5.622346 AAACAGACTCTCCCCAGATAATC 57.378 43.478 0.00 0.00 0.00 1.75
2736 2830 7.253950 CCGGCTGTAATGTTTAATTAATGTTGC 60.254 37.037 0.00 0.02 0.00 4.17
2852 2965 2.752238 AGGAGGAGGACGACGCTG 60.752 66.667 0.00 0.00 0.00 5.18
2853 2966 2.438795 GAGGAGGAGGACGACGCT 60.439 66.667 0.00 0.00 0.00 5.07
2862 2975 4.444081 ACCGACCCCGAGGAGGAG 62.444 72.222 8.93 0.00 45.00 3.69
3055 3190 1.008309 GCGAGTACGAGGAGATGCC 60.008 63.158 0.00 0.00 42.66 4.40
3357 3526 0.251832 TGGAGGAAGAGGAAGCTCGT 60.252 55.000 0.00 0.00 0.00 4.18
3571 3776 2.407616 CTACGCATCCGACTCGCA 59.592 61.111 0.00 0.00 38.29 5.10
3875 4107 1.598962 GACACCAGCAGCAGCAAGA 60.599 57.895 3.17 0.00 45.49 3.02
3892 4127 0.325671 AAGATGGGGCTCTTCTCCGA 60.326 55.000 2.90 0.00 29.38 4.55
3915 4151 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
3916 4152 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
3918 4154 2.748058 CTAGCCACCACCACCACCAC 62.748 65.000 0.00 0.00 0.00 4.16
3920 4156 2.351276 CTAGCCACCACCACCACC 59.649 66.667 0.00 0.00 0.00 4.61
4244 4506 2.839026 GTCGTTCGACTCGTAATCAGTG 59.161 50.000 16.50 0.00 32.82 3.66
4245 4507 2.740981 AGTCGTTCGACTCGTAATCAGT 59.259 45.455 19.92 0.00 41.08 3.41
4247 4509 3.928992 ACTAGTCGTTCGACTCGTAATCA 59.071 43.478 27.01 10.46 43.52 2.57
4280 4552 2.093973 ACCTCCACTTTGCGACTCATAG 60.094 50.000 0.00 0.00 0.00 2.23
4281 4553 1.899814 ACCTCCACTTTGCGACTCATA 59.100 47.619 0.00 0.00 0.00 2.15
4282 4554 0.687354 ACCTCCACTTTGCGACTCAT 59.313 50.000 0.00 0.00 0.00 2.90
4283 4555 0.033504 GACCTCCACTTTGCGACTCA 59.966 55.000 0.00 0.00 0.00 3.41
4284 4556 1.009389 CGACCTCCACTTTGCGACTC 61.009 60.000 0.00 0.00 0.00 3.36
4285 4557 1.006102 CGACCTCCACTTTGCGACT 60.006 57.895 0.00 0.00 0.00 4.18
4286 4558 1.006571 TCGACCTCCACTTTGCGAC 60.007 57.895 0.00 0.00 0.00 5.19
4287 4559 1.006571 GTCGACCTCCACTTTGCGA 60.007 57.895 3.51 0.00 0.00 5.10
4309 4581 6.036517 TCGGTAAACTAGTCTACACGAGAATC 59.963 42.308 8.58 0.00 35.37 2.52
4310 4582 5.877012 TCGGTAAACTAGTCTACACGAGAAT 59.123 40.000 8.58 0.00 35.37 2.40
4327 4599 2.439409 TCCACATCTCGACTCGGTAAA 58.561 47.619 0.00 0.00 0.00 2.01
4328 4600 2.118313 TCCACATCTCGACTCGGTAA 57.882 50.000 0.00 0.00 0.00 2.85
4329 4601 1.947456 CATCCACATCTCGACTCGGTA 59.053 52.381 0.00 0.00 0.00 4.02
4341 4613 2.956333 TCGTCGACTAATCCATCCACAT 59.044 45.455 14.70 0.00 0.00 3.21
4342 4614 2.098607 GTCGTCGACTAATCCATCCACA 59.901 50.000 18.09 0.00 0.00 4.17
4406 4678 7.286087 TGAGCAAGCTCATTTATACCATCAAAT 59.714 33.333 20.00 0.00 46.80 2.32
4443 4715 1.074889 TGGAAAGAACTAGGGTTGCCC 59.925 52.381 0.00 0.00 45.90 5.36
4445 4717 2.437413 CCTGGAAAGAACTAGGGTTGC 58.563 52.381 0.00 0.00 35.36 4.17
4448 4720 2.046280 AGCCTGGAAAGAACTAGGGT 57.954 50.000 0.00 0.00 42.68 4.34
4449 4721 2.716217 CAAGCCTGGAAAGAACTAGGG 58.284 52.381 0.00 0.00 38.65 3.53
4451 4723 3.006247 GAGCAAGCCTGGAAAGAACTAG 58.994 50.000 0.00 0.00 0.00 2.57
4453 4725 1.546548 GGAGCAAGCCTGGAAAGAACT 60.547 52.381 0.00 0.00 0.00 3.01
4455 4727 0.773644 AGGAGCAAGCCTGGAAAGAA 59.226 50.000 0.00 0.00 36.76 2.52
4456 4728 0.326264 GAGGAGCAAGCCTGGAAAGA 59.674 55.000 0.00 0.00 38.73 2.52
4457 4729 0.037303 TGAGGAGCAAGCCTGGAAAG 59.963 55.000 0.00 0.00 38.73 2.62
4458 4730 0.250901 GTGAGGAGCAAGCCTGGAAA 60.251 55.000 0.00 0.00 38.73 3.13
4459 4731 1.376466 GTGAGGAGCAAGCCTGGAA 59.624 57.895 0.00 0.00 38.73 3.53
4460 4732 2.596851 GGTGAGGAGCAAGCCTGGA 61.597 63.158 0.00 0.00 38.73 3.86
4462 4734 0.177604 CTAGGTGAGGAGCAAGCCTG 59.822 60.000 0.00 0.00 38.73 4.85
4463 4735 0.041833 TCTAGGTGAGGAGCAAGCCT 59.958 55.000 0.00 0.00 42.17 4.58
4464 4736 1.127343 ATCTAGGTGAGGAGCAAGCC 58.873 55.000 0.00 0.00 0.00 4.35
4466 4738 1.537776 CGCATCTAGGTGAGGAGCAAG 60.538 57.143 7.33 0.00 0.00 4.01
4467 4739 0.461548 CGCATCTAGGTGAGGAGCAA 59.538 55.000 7.33 0.00 0.00 3.91
4470 4742 1.365633 GGCGCATCTAGGTGAGGAG 59.634 63.158 10.83 0.00 0.00 3.69
4471 4743 1.381191 TGGCGCATCTAGGTGAGGA 60.381 57.895 10.83 0.00 0.00 3.71
4472 4744 1.227380 GTGGCGCATCTAGGTGAGG 60.227 63.158 10.83 0.00 0.00 3.86
4473 4745 1.227380 GGTGGCGCATCTAGGTGAG 60.227 63.158 10.83 4.42 0.00 3.51
4531 4803 3.120086 GCCTACGGGTCATGGCCAT 62.120 63.158 20.13 14.09 39.49 4.40
4565 4837 1.402787 CTTCCTCTCCTCTCTCTGGC 58.597 60.000 0.00 0.00 0.00 4.85
4567 4839 1.568597 TCCCTTCCTCTCCTCTCTCTG 59.431 57.143 0.00 0.00 0.00 3.35
4576 4871 1.002274 TGCCTCCTCCCTTCCTCTC 59.998 63.158 0.00 0.00 0.00 3.20
4577 4872 1.306568 GTGCCTCCTCCCTTCCTCT 60.307 63.158 0.00 0.00 0.00 3.69
4652 4958 2.512286 CATCACGCACGGGAGCAT 60.512 61.111 0.05 0.00 0.00 3.79
4682 4989 1.879796 GCTCCCAATCGATCCCATCAC 60.880 57.143 0.00 0.00 0.00 3.06
4683 4990 0.397941 GCTCCCAATCGATCCCATCA 59.602 55.000 0.00 0.00 0.00 3.07
4684 4991 0.689623 AGCTCCCAATCGATCCCATC 59.310 55.000 0.00 0.00 0.00 3.51
4685 4992 1.143813 AAGCTCCCAATCGATCCCAT 58.856 50.000 0.00 0.00 0.00 4.00
4701 5008 2.633860 CAGTCACTGGAACCCAAGC 58.366 57.895 0.00 0.00 30.80 4.01
4716 5024 2.093106 CTACTTAGCTCACGTCCCAGT 58.907 52.381 0.00 0.00 0.00 4.00
4729 5037 2.103263 CCCAAGTGGCTAGCCTACTTAG 59.897 54.545 32.69 28.32 36.46 2.18
4806 5120 0.109342 AGCAGTGCTAGCCAACACTT 59.891 50.000 18.11 0.00 44.59 3.16
4833 5147 9.744468 CTGTACAGCACATTACAGTATATACAA 57.256 33.333 10.54 1.42 40.19 2.41
5006 5320 2.028925 CAAAAGTGGCGGCCCAAC 59.971 61.111 17.97 9.12 44.33 3.77
5007 5321 2.443016 ACAAAAGTGGCGGCCCAA 60.443 55.556 17.97 0.00 44.33 4.12
5008 5322 2.909965 GACAAAAGTGGCGGCCCA 60.910 61.111 17.97 1.34 39.32 5.36
5009 5323 3.680786 GGACAAAAGTGGCGGCCC 61.681 66.667 17.97 8.02 31.03 5.80
5010 5324 4.038080 CGGACAAAAGTGGCGGCC 62.038 66.667 13.32 13.32 31.03 6.13
5011 5325 3.284449 ACGGACAAAAGTGGCGGC 61.284 61.111 0.00 0.00 36.56 6.53
5012 5326 2.637025 CACGGACAAAAGTGGCGG 59.363 61.111 0.00 0.00 39.02 6.13
5013 5327 2.051345 GCACGGACAAAAGTGGCG 60.051 61.111 0.00 0.00 38.68 5.69
5027 5341 2.654912 CGTCCGTTTGAGTCGGCAC 61.655 63.158 0.00 0.00 46.49 5.01
5028 5342 2.355363 CGTCCGTTTGAGTCGGCA 60.355 61.111 0.00 0.00 46.49 5.69
5029 5343 3.774702 GCGTCCGTTTGAGTCGGC 61.775 66.667 0.00 0.00 46.49 5.54
5031 5345 2.372690 CCTGCGTCCGTTTGAGTCG 61.373 63.158 0.00 0.00 0.00 4.18
5032 5346 2.668280 GCCTGCGTCCGTTTGAGTC 61.668 63.158 0.00 0.00 0.00 3.36
5033 5347 2.665185 GCCTGCGTCCGTTTGAGT 60.665 61.111 0.00 0.00 0.00 3.41
5034 5348 3.777925 CGCCTGCGTCCGTTTGAG 61.778 66.667 2.83 0.00 34.35 3.02
5037 5351 4.388499 ATCCGCCTGCGTCCGTTT 62.388 61.111 10.94 0.00 37.81 3.60
5040 5354 4.812476 TTCATCCGCCTGCGTCCG 62.812 66.667 10.94 0.00 37.81 4.79
5041 5355 2.892425 CTTCATCCGCCTGCGTCC 60.892 66.667 10.94 0.00 37.81 4.79
5042 5356 2.125512 ACTTCATCCGCCTGCGTC 60.126 61.111 10.94 0.00 37.81 5.19
5043 5357 2.434884 CACTTCATCCGCCTGCGT 60.435 61.111 10.94 0.00 37.81 5.24
5044 5358 3.197790 CCACTTCATCCGCCTGCG 61.198 66.667 4.20 4.20 39.44 5.18
5045 5359 2.825836 CCCACTTCATCCGCCTGC 60.826 66.667 0.00 0.00 0.00 4.85
5046 5360 1.450312 GACCCACTTCATCCGCCTG 60.450 63.158 0.00 0.00 0.00 4.85
5047 5361 2.990479 GACCCACTTCATCCGCCT 59.010 61.111 0.00 0.00 0.00 5.52
5048 5362 2.511600 CGACCCACTTCATCCGCC 60.512 66.667 0.00 0.00 0.00 6.13
5049 5363 3.195698 GCGACCCACTTCATCCGC 61.196 66.667 0.00 0.00 35.91 5.54
5050 5364 2.511600 GGCGACCCACTTCATCCG 60.512 66.667 0.00 0.00 0.00 4.18
5062 5376 1.212751 GCAACTTCAATGGGGCGAC 59.787 57.895 0.00 0.00 0.00 5.19
5063 5377 0.960364 GAGCAACTTCAATGGGGCGA 60.960 55.000 0.00 0.00 0.00 5.54
5064 5378 0.962356 AGAGCAACTTCAATGGGGCG 60.962 55.000 0.00 0.00 0.00 6.13
5065 5379 2.128771 TAGAGCAACTTCAATGGGGC 57.871 50.000 0.00 0.00 0.00 5.80
5066 5380 4.335416 TCTTTAGAGCAACTTCAATGGGG 58.665 43.478 0.00 0.00 0.00 4.96
5067 5381 5.557891 CTCTTTAGAGCAACTTCAATGGG 57.442 43.478 0.00 0.00 35.13 4.00
5080 5394 8.729805 ACAAGAAAATCCTATGCTCTTTAGAG 57.270 34.615 2.33 2.33 44.75 2.43
5081 5395 8.321353 TGACAAGAAAATCCTATGCTCTTTAGA 58.679 33.333 0.00 0.00 0.00 2.10
5082 5396 8.394121 GTGACAAGAAAATCCTATGCTCTTTAG 58.606 37.037 0.00 0.00 0.00 1.85
5083 5397 7.882791 TGTGACAAGAAAATCCTATGCTCTTTA 59.117 33.333 0.00 0.00 0.00 1.85
5084 5398 6.716628 TGTGACAAGAAAATCCTATGCTCTTT 59.283 34.615 0.00 0.00 0.00 2.52
5255 5569 4.321230 GCAACAACTGATAAGTCCCCTTTG 60.321 45.833 0.00 0.00 31.89 2.77
5270 5592 3.117663 TCCAAAGAGTTAGGGCAACAACT 60.118 43.478 0.00 0.00 39.81 3.16
5383 5726 3.197549 GCAAAGAAGGATCTCAGGTCTCT 59.802 47.826 0.00 0.00 33.77 3.10
5385 5728 2.238395 GGCAAAGAAGGATCTCAGGTCT 59.762 50.000 0.00 0.00 33.77 3.85
5386 5729 2.026822 TGGCAAAGAAGGATCTCAGGTC 60.027 50.000 0.00 0.00 33.77 3.85
5387 5730 1.988107 TGGCAAAGAAGGATCTCAGGT 59.012 47.619 0.00 0.00 33.77 4.00
5388 5731 2.795231 TGGCAAAGAAGGATCTCAGG 57.205 50.000 0.00 0.00 33.77 3.86
5453 5800 6.380095 AATCAAAAGCAATTGCACAAATGT 57.620 29.167 30.89 6.74 45.16 2.71
5556 5903 9.741647 GAGAAATTAGGGAATGAAATAAAGCAG 57.258 33.333 0.00 0.00 0.00 4.24
5640 5987 5.786401 ACATTCACGCAAACTTCTCTATC 57.214 39.130 0.00 0.00 0.00 2.08
5718 6186 2.011947 GGTACCGGTTCCAATTGCTAC 58.988 52.381 24.17 6.82 0.00 3.58
6099 6623 4.136796 GCTTAACATGCATCAGGTATGGA 58.863 43.478 0.00 0.00 43.15 3.41
6126 6650 2.543777 TGTTGTTGTCCCAGTCTAGC 57.456 50.000 0.00 0.00 0.00 3.42
6147 6874 5.707242 TCCAGTTGTTGTTGTTGTTGTTA 57.293 34.783 0.00 0.00 0.00 2.41
6285 7017 6.515832 AGGAATCAATTGTCTTTTTGGTGTC 58.484 36.000 5.13 0.00 0.00 3.67
6297 7029 6.991531 TGCTGCTTTTTAAAGGAATCAATTGT 59.008 30.769 5.13 0.00 35.89 2.71
6378 7110 3.028850 CCAAATCCCTGCACATCAGAAT 58.971 45.455 0.00 0.00 45.72 2.40
6382 7114 2.658285 GATCCAAATCCCTGCACATCA 58.342 47.619 0.00 0.00 0.00 3.07
6384 7116 2.077687 GGATCCAAATCCCTGCACAT 57.922 50.000 6.95 0.00 45.11 3.21
6599 7331 7.181125 AGTTGAACAGATGAGGACTAATAGGTT 59.819 37.037 0.00 0.00 0.00 3.50
6614 7346 3.466836 TGACGAGCAAAGTTGAACAGAT 58.533 40.909 0.00 0.00 0.00 2.90
6636 7368 4.281182 ACTCGTCAGGAACAGACTAACAAT 59.719 41.667 0.00 0.00 42.94 2.71
6655 7387 5.456192 AAGAACATTAAGCATTCGACTCG 57.544 39.130 0.00 0.00 0.00 4.18
6683 7415 2.736721 CCTTATATCCCGCATTGTCACG 59.263 50.000 0.00 0.00 0.00 4.35
6755 7487 5.403897 GTTCATCGAACTCAACAAGAACA 57.596 39.130 0.00 0.00 39.23 3.18
6951 7683 6.830873 ACAAGATTGAAAAATCTCCTCCTG 57.169 37.500 0.00 0.00 38.49 3.86
7026 7758 1.421268 TGGCCAGCAGAGAGAGAAAAA 59.579 47.619 0.00 0.00 0.00 1.94
7027 7759 1.059098 TGGCCAGCAGAGAGAGAAAA 58.941 50.000 0.00 0.00 0.00 2.29
7028 7760 1.059098 TTGGCCAGCAGAGAGAGAAA 58.941 50.000 5.11 0.00 0.00 2.52
7030 7762 2.165357 TATTGGCCAGCAGAGAGAGA 57.835 50.000 5.11 0.00 0.00 3.10
7031 7763 2.104451 ACATATTGGCCAGCAGAGAGAG 59.896 50.000 5.11 0.00 0.00 3.20
7033 7765 2.219458 CACATATTGGCCAGCAGAGAG 58.781 52.381 5.11 0.00 0.00 3.20
7054 7787 5.049612 TGACGAGTATCTTCCATCACGATAC 60.050 44.000 0.00 0.00 39.66 2.24
7060 7793 5.506686 CTCTTGACGAGTATCTTCCATCA 57.493 43.478 0.00 0.00 31.44 3.07
7074 7807 1.532437 TGAAGCATGCAACTCTTGACG 59.468 47.619 21.98 0.00 0.00 4.35
7147 7880 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
7148 7881 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
7149 7882 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
7150 7883 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
7151 7884 8.423215 GCTAAACGCTCTTATATTAGTTTACGG 58.577 37.037 0.00 0.00 34.29 4.02
7152 7885 8.961092 TGCTAAACGCTCTTATATTAGTTTACG 58.039 33.333 0.00 0.00 40.11 3.18
7166 7899 9.542462 TCACTATTTTAATATGCTAAACGCTCT 57.458 29.630 0.00 0.00 40.11 4.09
7198 7931 9.710818 TCCCTCTGTAAACTAATATAAGAGTGT 57.289 33.333 0.00 0.00 0.00 3.55
7200 7933 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
7211 7944 9.577222 GAAGATATAGTACTCCCTCTGTAAACT 57.423 37.037 0.00 0.00 0.00 2.66
7212 7945 9.577222 AGAAGATATAGTACTCCCTCTGTAAAC 57.423 37.037 0.00 0.00 0.00 2.01
7213 7946 9.575868 CAGAAGATATAGTACTCCCTCTGTAAA 57.424 37.037 0.00 0.00 0.00 2.01
7214 7947 8.946248 TCAGAAGATATAGTACTCCCTCTGTAA 58.054 37.037 0.00 0.00 0.00 2.41
7215 7948 8.507582 TCAGAAGATATAGTACTCCCTCTGTA 57.492 38.462 0.00 0.00 0.00 2.74
7216 7949 7.395525 TCAGAAGATATAGTACTCCCTCTGT 57.604 40.000 0.00 0.00 0.00 3.41
7217 7950 7.175990 GGTTCAGAAGATATAGTACTCCCTCTG 59.824 44.444 0.00 4.99 0.00 3.35
7218 7951 7.235804 GGTTCAGAAGATATAGTACTCCCTCT 58.764 42.308 0.00 0.00 0.00 3.69
7219 7952 6.149807 CGGTTCAGAAGATATAGTACTCCCTC 59.850 46.154 0.00 0.00 0.00 4.30
7220 7953 6.005198 CGGTTCAGAAGATATAGTACTCCCT 58.995 44.000 0.00 0.00 0.00 4.20
7221 7954 6.002704 TCGGTTCAGAAGATATAGTACTCCC 58.997 44.000 0.00 0.00 0.00 4.30
7222 7955 7.507733 TTCGGTTCAGAAGATATAGTACTCC 57.492 40.000 0.00 0.00 0.00 3.85
7223 7956 9.968870 ATTTTCGGTTCAGAAGATATAGTACTC 57.031 33.333 0.00 0.00 0.00 2.59
7227 7960 9.667107 TTGAATTTTCGGTTCAGAAGATATAGT 57.333 29.630 0.00 0.00 36.96 2.12
7354 8090 6.954944 TGCGGCTATCAAGTTATAATGTTTC 58.045 36.000 0.00 0.00 0.00 2.78
7410 8146 4.622933 GCCCTAAACCCTAAAAGCAAATGG 60.623 45.833 0.00 0.00 0.00 3.16
7523 8262 8.941977 GTTTTAAAAACTTCACCAGGTTTCAAT 58.058 29.630 1.31 0.00 42.02 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.