Multiple sequence alignment - TraesCS5A01G135700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G135700 chr5A 100.000 5772 0 0 1 5772 306875818 306881589 0.000000e+00 10659.0
1 TraesCS5A01G135700 chr5A 89.943 348 27 2 488 827 509913042 509912695 5.310000e-120 442.0
2 TraesCS5A01G135700 chr5A 93.023 43 2 1 2356 2397 306878142 306878184 1.740000e-05 62.1
3 TraesCS5A01G135700 chr5A 93.023 43 2 1 2325 2367 306878173 306878214 1.740000e-05 62.1
4 TraesCS5A01G135700 chr5B 97.308 1783 30 8 3303 5071 251903791 251905569 0.000000e+00 3011.0
5 TraesCS5A01G135700 chr5B 97.649 1616 29 2 1593 3199 251902177 251903792 0.000000e+00 2765.0
6 TraesCS5A01G135700 chr5B 95.185 623 23 3 5153 5772 251905568 251906186 0.000000e+00 977.0
7 TraesCS5A01G135700 chr5B 89.833 718 38 13 865 1573 251901501 251902192 0.000000e+00 889.0
8 TraesCS5A01G135700 chr5D 96.052 1773 34 10 3303 5071 228247038 228248778 0.000000e+00 2854.0
9 TraesCS5A01G135700 chr5D 97.825 1609 33 2 1593 3199 228245431 228247039 0.000000e+00 2776.0
10 TraesCS5A01G135700 chr5D 96.457 621 19 2 5153 5772 228248777 228249395 0.000000e+00 1022.0
11 TraesCS5A01G135700 chr5D 94.237 642 27 5 937 1573 228244810 228245446 0.000000e+00 972.0
12 TraesCS5A01G135700 chr5D 95.041 121 5 1 3184 3304 134808393 134808274 7.640000e-44 189.0
13 TraesCS5A01G135700 chr5D 97.826 92 2 0 5066 5157 371800731 371800640 5.990000e-35 159.0
14 TraesCS5A01G135700 chr5D 94.231 52 2 1 5426 5476 43217676 43217727 1.720000e-10 78.7
15 TraesCS5A01G135700 chr5D 95.833 48 0 2 5423 5468 35133467 35133420 6.200000e-10 76.8
16 TraesCS5A01G135700 chr5D 88.710 62 1 4 871 927 228244712 228244772 2.890000e-08 71.3
17 TraesCS5A01G135700 chr5D 93.023 43 2 1 2325 2367 228246196 228246237 1.740000e-05 62.1
18 TraesCS5A01G135700 chr7D 93.915 493 30 0 1 493 168498401 168498893 0.000000e+00 745.0
19 TraesCS5A01G135700 chr7D 93.686 491 31 0 3 493 136691111 136691601 0.000000e+00 736.0
20 TraesCS5A01G135700 chr7D 93.509 493 32 0 1 493 527731297 527731789 0.000000e+00 734.0
21 TraesCS5A01G135700 chr7D 90.571 350 23 4 488 829 168499563 168499910 6.820000e-124 455.0
22 TraesCS5A01G135700 chr7D 89.655 348 27 5 488 827 204114166 204114512 8.880000e-118 435.0
23 TraesCS5A01G135700 chr7D 98.198 111 2 0 3194 3304 248393516 248393406 1.640000e-45 195.0
24 TraesCS5A01G135700 chr7D 95.763 118 5 0 3195 3312 379324128 379324245 2.120000e-44 191.0
25 TraesCS5A01G135700 chr7D 96.000 100 2 2 5056 5154 52840436 52840534 1.660000e-35 161.0
26 TraesCS5A01G135700 chr7D 91.818 110 5 4 5063 5171 618321358 618321464 3.600000e-32 150.0
27 TraesCS5A01G135700 chr7D 90.265 113 9 2 5055 5165 611241703 611241815 4.660000e-31 147.0
28 TraesCS5A01G135700 chr7D 83.200 125 18 3 5419 5541 169472594 169472717 1.700000e-20 111.0
29 TraesCS5A01G135700 chr4A 93.915 493 30 0 1 493 68961213 68961705 0.000000e+00 745.0
30 TraesCS5A01G135700 chr4A 89.773 352 22 8 488 826 20247988 20248338 6.870000e-119 438.0
31 TraesCS5A01G135700 chr4A 95.200 125 4 2 3181 3304 239632691 239632814 4.560000e-46 196.0
32 TraesCS5A01G135700 chr4A 96.581 117 4 0 3188 3304 381221317 381221433 1.640000e-45 195.0
33 TraesCS5A01G135700 chr4A 95.833 120 3 2 3186 3304 628490998 628491116 5.900000e-45 193.0
34 TraesCS5A01G135700 chr4A 94.643 56 1 2 5423 5476 714572351 714572296 1.030000e-12 86.1
35 TraesCS5A01G135700 chr2D 93.915 493 30 0 1 493 249984621 249985113 0.000000e+00 745.0
36 TraesCS5A01G135700 chr2D 93.306 493 33 0 1 493 450909107 450909599 0.000000e+00 728.0
37 TraesCS5A01G135700 chr2D 93.306 493 32 1 1 493 532151955 532151464 0.000000e+00 726.0
38 TraesCS5A01G135700 chr2D 90.517 348 25 1 488 827 559316001 559316348 2.450000e-123 453.0
39 TraesCS5A01G135700 chr2D 90.490 347 25 2 488 826 35246985 35246639 8.820000e-123 451.0
40 TraesCS5A01G135700 chr2D 90.490 347 25 2 488 826 95504597 95504943 8.820000e-123 451.0
41 TraesCS5A01G135700 chr2D 98.214 112 2 0 3193 3304 90361245 90361356 4.560000e-46 196.0
42 TraesCS5A01G135700 chr2D 94.030 67 4 0 2469 2535 289842449 289842383 1.020000e-17 102.0
43 TraesCS5A01G135700 chr2D 94.828 58 1 2 5419 5474 226552196 226552253 7.970000e-14 89.8
44 TraesCS5A01G135700 chr2D 94.643 56 1 2 5423 5476 37959510 37959455 1.030000e-12 86.1
45 TraesCS5A01G135700 chr6D 93.712 493 31 0 1 493 68857990 68858482 0.000000e+00 739.0
46 TraesCS5A01G135700 chr6D 99.083 109 1 0 3196 3304 468640891 468640999 4.560000e-46 196.0
47 TraesCS5A01G135700 chr6D 97.297 111 3 0 3194 3304 222595304 222595194 7.640000e-44 189.0
48 TraesCS5A01G135700 chr6D 96.491 114 3 1 3192 3304 298920977 298921090 2.750000e-43 187.0
49 TraesCS5A01G135700 chr6D 97.248 109 3 0 3196 3304 200871673 200871781 9.880000e-43 185.0
50 TraesCS5A01G135700 chr6D 97.248 109 3 0 3198 3306 418960916 418960808 9.880000e-43 185.0
51 TraesCS5A01G135700 chr6D 97.196 107 3 0 3198 3304 7489849 7489743 1.280000e-41 182.0
52 TraesCS5A01G135700 chr6D 97.196 107 3 0 3198 3304 7493774 7493668 1.280000e-41 182.0
53 TraesCS5A01G135700 chr6D 97.196 107 3 0 3198 3304 7499189 7499083 1.280000e-41 182.0
54 TraesCS5A01G135700 chr6D 96.364 110 4 0 3195 3304 38346324 38346433 1.280000e-41 182.0
55 TraesCS5A01G135700 chr6D 95.575 113 4 1 3192 3304 455884008 455884119 4.600000e-41 180.0
56 TraesCS5A01G135700 chr6D 97.753 89 1 1 5066 5154 248003999 248004086 1.000000e-32 152.0
57 TraesCS5A01G135700 chr6D 96.629 89 3 0 5066 5154 120647323 120647235 1.300000e-31 148.0
58 TraesCS5A01G135700 chr6D 96.629 89 3 0 5066 5154 464673608 464673696 1.300000e-31 148.0
59 TraesCS5A01G135700 chr6D 93.878 98 5 1 5064 5161 4556035 4555939 4.660000e-31 147.0
60 TraesCS5A01G135700 chr6D 97.647 85 2 0 5070 5154 205459663 205459579 4.660000e-31 147.0
61 TraesCS5A01G135700 chr6D 97.647 85 2 0 5070 5154 229430747 229430663 4.660000e-31 147.0
62 TraesCS5A01G135700 chr6D 97.647 85 2 0 5070 5154 385917025 385916941 4.660000e-31 147.0
63 TraesCS5A01G135700 chr6D 96.552 87 3 0 5068 5154 6507671 6507757 1.680000e-30 145.0
64 TraesCS5A01G135700 chr6D 93.000 100 6 1 5056 5154 437774035 437774134 1.680000e-30 145.0
65 TraesCS5A01G135700 chr6D 95.556 90 4 0 5065 5154 441898291 441898380 1.680000e-30 145.0
66 TraesCS5A01G135700 chr6D 90.741 108 8 2 5054 5160 462231856 462231750 6.030000e-30 143.0
67 TraesCS5A01G135700 chr6D 94.565 92 4 1 5067 5157 291718566 291718657 2.170000e-29 141.0
68 TraesCS5A01G135700 chr6D 94.444 90 5 0 5066 5155 271233439 271233528 7.800000e-29 139.0
69 TraesCS5A01G135700 chr6D 91.919 99 7 1 5070 5167 461690205 461690107 2.800000e-28 137.0
70 TraesCS5A01G135700 chr6D 94.030 67 4 0 2469 2535 240368908 240368842 1.020000e-17 102.0
71 TraesCS5A01G135700 chr6D 96.226 53 0 2 5423 5473 27176614 27176562 1.030000e-12 86.1
72 TraesCS5A01G135700 chr6D 92.857 56 2 2 5423 5476 450858742 450858687 4.790000e-11 80.5
73 TraesCS5A01G135700 chr6D 93.878 49 0 2 5423 5468 49270639 49270687 2.890000e-08 71.3
74 TraesCS5A01G135700 chr4D 93.509 493 32 0 1 493 487285841 487285349 0.000000e+00 734.0
75 TraesCS5A01G135700 chr4D 90.805 348 24 2 488 827 66298406 66298059 5.270000e-125 459.0
76 TraesCS5A01G135700 chr4D 99.065 107 1 0 3198 3304 211385437 211385331 5.900000e-45 193.0
77 TraesCS5A01G135700 chr4D 99.065 107 1 0 3198 3304 317234727 317234621 5.900000e-45 193.0
78 TraesCS5A01G135700 chr4D 96.522 115 4 0 3190 3304 415293000 415293114 2.120000e-44 191.0
79 TraesCS5A01G135700 chr4D 92.381 105 5 3 5063 5166 133468701 133468599 4.660000e-31 147.0
80 TraesCS5A01G135700 chr4D 94.030 67 4 0 2469 2535 500241159 500241093 1.020000e-17 102.0
81 TraesCS5A01G135700 chr4D 92.188 64 5 0 2472 2535 247162109 247162046 2.210000e-14 91.6
82 TraesCS5A01G135700 chr1D 90.490 347 25 2 488 826 30588150 30587804 8.820000e-123 451.0
83 TraesCS5A01G135700 chr1D 97.368 114 3 0 3198 3311 227655417 227655304 1.640000e-45 195.0
84 TraesCS5A01G135700 chr1D 99.065 107 1 0 3198 3304 247520958 247521064 5.900000e-45 193.0
85 TraesCS5A01G135700 chr1D 95.798 119 3 2 3187 3304 440942686 440942569 2.120000e-44 191.0
86 TraesCS5A01G135700 chr1D 98.148 108 2 0 3198 3305 386156827 386156720 7.640000e-44 189.0
87 TraesCS5A01G135700 chr1D 96.629 89 3 0 5069 5157 463576527 463576615 1.300000e-31 148.0
88 TraesCS5A01G135700 chr1D 90.741 108 7 3 5065 5171 197821564 197821669 2.170000e-29 141.0
89 TraesCS5A01G135700 chr1D 94.030 67 4 0 2469 2535 83711464 83711398 1.020000e-17 102.0
90 TraesCS5A01G135700 chr1D 94.737 57 1 2 5422 5476 376729576 376729632 2.870000e-13 87.9
91 TraesCS5A01G135700 chr6A 97.479 119 1 2 3186 3304 250834632 250834516 9.810000e-48 202.0
92 TraesCS5A01G135700 chr6A 96.639 119 4 0 3186 3304 475435044 475435162 1.270000e-46 198.0
93 TraesCS5A01G135700 chr2A 95.968 124 2 3 3182 3304 16796573 16796694 1.270000e-46 198.0
94 TraesCS5A01G135700 chr2A 92.806 139 4 4 3190 3328 507071277 507071145 4.560000e-46 196.0
95 TraesCS5A01G135700 chr2A 95.200 125 2 4 3185 3307 587962099 587962221 1.640000e-45 195.0
96 TraesCS5A01G135700 chr3B 98.214 112 2 0 3194 3305 12156971 12156860 4.560000e-46 196.0
97 TraesCS5A01G135700 chr3B 95.522 67 3 0 2469 2535 15921744 15921678 2.200000e-19 108.0
98 TraesCS5A01G135700 chr3D 98.198 111 2 0 3194 3304 308275017 308274907 1.640000e-45 195.0
99 TraesCS5A01G135700 chr3D 95.726 117 4 1 3190 3306 339050069 339050184 2.750000e-43 187.0
100 TraesCS5A01G135700 chr3D 87.302 126 11 5 5066 5188 593241205 593241082 7.800000e-29 139.0
101 TraesCS5A01G135700 chr3D 93.939 66 4 0 2469 2534 594563458 594563393 3.680000e-17 100.0
102 TraesCS5A01G135700 chr3D 94.643 56 1 2 5423 5476 590082866 590082921 1.030000e-12 86.1
103 TraesCS5A01G135700 chr3D 92.593 54 3 1 5424 5476 593337979 593338032 6.200000e-10 76.8
104 TraesCS5A01G135700 chrUn 99.065 107 1 0 3198 3304 352766877 352766983 5.900000e-45 193.0
105 TraesCS5A01G135700 chrUn 95.798 119 3 2 3187 3304 11239917 11239800 2.120000e-44 191.0
106 TraesCS5A01G135700 chrUn 97.222 108 3 0 3197 3304 12279383 12279490 3.550000e-42 183.0
107 TraesCS5A01G135700 chrUn 92.593 108 5 3 5056 5161 241299893 241299999 1.000000e-32 152.0
108 TraesCS5A01G135700 chrUn 92.593 108 5 3 5056 5161 317310127 317310233 1.000000e-32 152.0
109 TraesCS5A01G135700 chrUn 92.593 108 5 3 5056 5161 333415658 333415764 1.000000e-32 152.0
110 TraesCS5A01G135700 chrUn 91.667 108 6 3 5056 5161 235338260 235338154 4.660000e-31 147.0
111 TraesCS5A01G135700 chrUn 93.750 96 6 0 5067 5162 369753173 369753268 1.680000e-30 145.0
112 TraesCS5A01G135700 chr4B 97.297 111 3 0 3194 3304 54037928 54038038 7.640000e-44 189.0
113 TraesCS5A01G135700 chr4B 94.898 98 3 2 5061 5157 552019834 552019738 1.000000e-32 152.0
114 TraesCS5A01G135700 chr4B 100.000 38 0 0 5424 5461 427278989 427279026 2.890000e-08 71.3
115 TraesCS5A01G135700 chr7B 93.548 124 8 0 3181 3304 3887338 3887215 9.880000e-43 185.0
116 TraesCS5A01G135700 chr1A 90.580 138 7 5 3171 3304 204618402 204618267 1.650000e-40 178.0
117 TraesCS5A01G135700 chr1A 94.643 56 1 2 5423 5476 485198880 485198825 1.030000e-12 86.1
118 TraesCS5A01G135700 chr3A 96.000 100 3 1 5056 5154 421454564 421454465 1.660000e-35 161.0
119 TraesCS5A01G135700 chr3A 93.519 108 4 3 5056 5161 574288089 574287983 2.150000e-34 158.0
120 TraesCS5A01G135700 chr6B 95.833 96 2 2 5060 5154 42774669 42774575 2.790000e-33 154.0
121 TraesCS5A01G135700 chr6B 96.610 59 2 0 2469 2527 261608931 261608989 1.320000e-16 99.0
122 TraesCS5A01G135700 chr6B 94.915 59 3 0 2469 2527 677434244 677434302 6.160000e-15 93.5
123 TraesCS5A01G135700 chr6B 96.154 52 0 2 5423 5472 717009517 717009466 3.710000e-12 84.2
124 TraesCS5A01G135700 chr7A 92.593 108 5 3 5056 5161 28932735 28932841 1.000000e-32 152.0
125 TraesCS5A01G135700 chr7A 92.593 108 5 3 5056 5161 28985236 28985342 1.000000e-32 152.0
126 TraesCS5A01G135700 chr7A 81.967 122 18 4 5423 5541 172063136 172063256 3.680000e-17 100.0
127 TraesCS5A01G135700 chr1B 88.983 118 10 3 5045 5161 150605138 150605253 6.030000e-30 143.0
128 TraesCS5A01G135700 chr1B 96.610 59 2 0 2469 2527 41250051 41250109 1.320000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G135700 chr5A 306875818 306881589 5771 False 3594.4 10659 95.348667 1 5772 3 chr5A.!!$F1 5771
1 TraesCS5A01G135700 chr5B 251901501 251906186 4685 False 1910.5 3011 94.993750 865 5772 4 chr5B.!!$F1 4907
2 TraesCS5A01G135700 chr5D 228244712 228249395 4683 False 1292.9 2854 94.384000 871 5772 6 chr5D.!!$F2 4901
3 TraesCS5A01G135700 chr7D 168498401 168499910 1509 False 600.0 745 92.243000 1 829 2 chr7D.!!$F9 828

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
858 1534 0.036732 TTTGGATCGGCAGTTGCTCT 59.963 50.0 3.88 0.00 41.7 4.09 F
1583 2301 0.037877 TTTGGATTAACCCCGCGGAA 59.962 50.0 30.73 13.96 38.0 4.30 F
1585 2303 0.037877 TGGATTAACCCCGCGGAAAA 59.962 50.0 30.73 15.13 38.0 2.29 F
3236 3964 0.179084 ACTTGTCGCGGGTATGGATG 60.179 55.0 6.13 0.00 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1824 2550 0.687354 GTCAGCCAAGAGAAGTCCCA 59.313 55.000 0.00 0.00 0.0 4.37 R
3217 3945 0.179084 CATCCATACCCGCGACAAGT 60.179 55.000 8.23 1.45 0.0 3.16 R
3289 4017 0.535797 CCTGTTACTCCCTCCGTTCC 59.464 60.000 0.00 0.00 0.0 3.62 R
5185 5927 1.003118 TGTGCTGATGTCCCCTGTAAC 59.997 52.381 0.00 0.00 0.0 2.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 1.068194 CGACGAGGAGGAGATATTGGC 60.068 57.143 0.00 0.00 0.00 4.52
73 74 2.305928 CATCACCACCTCAACAACCAA 58.694 47.619 0.00 0.00 0.00 3.67
76 77 0.253610 ACCACCTCAACAACCAACGA 59.746 50.000 0.00 0.00 0.00 3.85
82 83 2.203401 CTCAACAACCAACGACCGTTA 58.797 47.619 7.51 0.00 36.46 3.18
86 87 2.836262 ACAACCAACGACCGTTATTCA 58.164 42.857 7.51 0.00 36.46 2.57
98 99 3.016736 CCGTTATTCAGTGGCTCCATTT 58.983 45.455 0.00 0.00 0.00 2.32
123 124 1.199097 CCACCTTCCGGTTTTGAATCG 59.801 52.381 0.00 0.00 42.13 3.34
170 171 7.551035 CTTCTCTGGAAGGACTATTTTGATG 57.449 40.000 0.00 0.00 43.68 3.07
196 197 4.367450 CAAACCCGTTGTTCAAACATCAT 58.633 39.130 0.00 0.00 38.95 2.45
206 207 6.266168 TGTTCAAACATCATAAATTCCGCT 57.734 33.333 0.00 0.00 33.17 5.52
239 240 5.351465 CGTATGAGTAGGCATGTTTTCAACT 59.649 40.000 0.00 0.00 0.00 3.16
240 241 6.533723 CGTATGAGTAGGCATGTTTTCAACTA 59.466 38.462 0.00 0.00 0.00 2.24
277 278 3.704566 TGGTCGGCTATGATGACTACTTT 59.295 43.478 0.00 0.00 33.21 2.66
280 281 5.348986 GTCGGCTATGATGACTACTTTGAA 58.651 41.667 0.00 0.00 0.00 2.69
296 297 2.219080 TGAATGCAAAGAGGATGCCA 57.781 45.000 0.00 0.00 43.16 4.92
367 368 0.256752 TGCTTGCATATGGAGTGCCT 59.743 50.000 16.99 0.00 41.83 4.75
369 370 1.748244 GCTTGCATATGGAGTGCCTGA 60.748 52.381 4.56 0.00 41.83 3.86
383 384 3.199289 AGTGCCTGATGATCTCATTGACA 59.801 43.478 0.00 0.00 36.57 3.58
406 407 1.009900 CGTCCGTATGAGCGAGTCC 60.010 63.158 0.00 0.00 0.00 3.85
418 419 0.175760 GCGAGTCCACATGCCTAGAA 59.824 55.000 0.00 0.00 0.00 2.10
421 422 2.101415 CGAGTCCACATGCCTAGAATCA 59.899 50.000 0.00 0.00 0.00 2.57
469 470 1.614317 GCTGTGTTTGGCCCTGAGTAT 60.614 52.381 0.00 0.00 0.00 2.12
483 484 3.320541 CCTGAGTATTTGAGAGAGCCGAT 59.679 47.826 0.00 0.00 0.00 4.18
505 1181 1.733912 GCTGAAGACATGCGTGATTGA 59.266 47.619 14.17 0.34 0.00 2.57
542 1218 5.280654 ACTGCAAAATGATTTGGTTGAGT 57.719 34.783 0.00 0.00 44.93 3.41
564 1240 2.291209 ATGTGGACTCATGTTGGCAA 57.709 45.000 0.00 0.00 0.00 4.52
565 1241 1.317613 TGTGGACTCATGTTGGCAAC 58.682 50.000 23.12 23.12 0.00 4.17
571 1247 3.509575 GGACTCATGTTGGCAACCAATAA 59.490 43.478 26.31 8.83 45.80 1.40
584 1260 8.133024 TGGCAACCAATAAATGTATCTTCTTT 57.867 30.769 0.00 0.00 0.00 2.52
585 1261 8.592809 TGGCAACCAATAAATGTATCTTCTTTT 58.407 29.630 0.00 0.00 0.00 2.27
596 1272 9.906660 AAATGTATCTTCTTTTATTCGTTTGCA 57.093 25.926 0.00 0.00 0.00 4.08
597 1273 9.906660 AATGTATCTTCTTTTATTCGTTTGCAA 57.093 25.926 0.00 0.00 0.00 4.08
598 1274 9.906660 ATGTATCTTCTTTTATTCGTTTGCAAA 57.093 25.926 8.05 8.05 0.00 3.68
599 1275 9.737427 TGTATCTTCTTTTATTCGTTTGCAAAA 57.263 25.926 14.67 0.00 0.00 2.44
600 1276 9.989394 GTATCTTCTTTTATTCGTTTGCAAAAC 57.011 29.630 14.67 7.51 0.00 2.43
601 1277 8.871686 ATCTTCTTTTATTCGTTTGCAAAACT 57.128 26.923 14.67 1.52 0.00 2.66
602 1278 9.959749 ATCTTCTTTTATTCGTTTGCAAAACTA 57.040 25.926 14.67 2.05 0.00 2.24
603 1279 9.959749 TCTTCTTTTATTCGTTTGCAAAACTAT 57.040 25.926 14.67 9.56 0.00 2.12
604 1280 9.993881 CTTCTTTTATTCGTTTGCAAAACTATG 57.006 29.630 14.67 0.00 0.00 2.23
605 1281 9.522804 TTCTTTTATTCGTTTGCAAAACTATGT 57.477 25.926 14.67 1.14 0.00 2.29
606 1282 8.963130 TCTTTTATTCGTTTGCAAAACTATGTG 58.037 29.630 14.67 0.46 0.00 3.21
607 1283 8.858003 TTTTATTCGTTTGCAAAACTATGTGA 57.142 26.923 14.67 0.94 0.00 3.58
608 1284 8.858003 TTTATTCGTTTGCAAAACTATGTGAA 57.142 26.923 14.67 9.56 0.00 3.18
609 1285 8.858003 TTATTCGTTTGCAAAACTATGTGAAA 57.142 26.923 14.67 0.00 0.00 2.69
610 1286 6.561945 TTCGTTTGCAAAACTATGTGAAAC 57.438 33.333 14.67 0.00 37.35 2.78
656 1332 8.834749 TGTAAAAGTTTACCATTTATTTGGGC 57.165 30.769 10.62 0.00 41.72 5.36
657 1333 7.599245 TGTAAAAGTTTACCATTTATTTGGGCG 59.401 33.333 10.62 0.00 41.72 6.13
658 1334 4.729227 AGTTTACCATTTATTTGGGCGG 57.271 40.909 0.00 0.00 41.35 6.13
659 1335 4.090819 AGTTTACCATTTATTTGGGCGGT 58.909 39.130 0.00 0.00 41.35 5.68
660 1336 4.528987 AGTTTACCATTTATTTGGGCGGTT 59.471 37.500 0.00 0.00 41.35 4.44
661 1337 5.715753 AGTTTACCATTTATTTGGGCGGTTA 59.284 36.000 0.00 0.00 41.35 2.85
662 1338 6.210984 AGTTTACCATTTATTTGGGCGGTTAA 59.789 34.615 0.00 0.00 41.35 2.01
663 1339 6.600882 TTACCATTTATTTGGGCGGTTAAA 57.399 33.333 0.00 0.00 41.35 1.52
664 1340 4.823157 ACCATTTATTTGGGCGGTTAAAC 58.177 39.130 0.00 0.00 41.35 2.01
665 1341 4.528987 ACCATTTATTTGGGCGGTTAAACT 59.471 37.500 0.00 0.00 41.35 2.66
666 1342 5.715753 ACCATTTATTTGGGCGGTTAAACTA 59.284 36.000 0.00 0.00 41.35 2.24
667 1343 6.381707 ACCATTTATTTGGGCGGTTAAACTAT 59.618 34.615 0.00 0.00 41.35 2.12
668 1344 7.093245 ACCATTTATTTGGGCGGTTAAACTATT 60.093 33.333 0.00 0.00 41.35 1.73
669 1345 7.766738 CCATTTATTTGGGCGGTTAAACTATTT 59.233 33.333 0.00 0.00 32.80 1.40
670 1346 9.157104 CATTTATTTGGGCGGTTAAACTATTTT 57.843 29.630 0.00 0.00 0.00 1.82
671 1347 8.535690 TTTATTTGGGCGGTTAAACTATTTTG 57.464 30.769 0.00 0.00 0.00 2.44
672 1348 3.579335 TGGGCGGTTAAACTATTTTGC 57.421 42.857 0.00 0.00 0.00 3.68
673 1349 3.158676 TGGGCGGTTAAACTATTTTGCT 58.841 40.909 0.00 0.00 0.00 3.91
674 1350 3.574826 TGGGCGGTTAAACTATTTTGCTT 59.425 39.130 0.00 0.00 0.00 3.91
675 1351 3.924073 GGGCGGTTAAACTATTTTGCTTG 59.076 43.478 0.00 0.00 0.00 4.01
676 1352 4.552355 GGCGGTTAAACTATTTTGCTTGT 58.448 39.130 0.00 0.00 0.00 3.16
677 1353 4.986034 GGCGGTTAAACTATTTTGCTTGTT 59.014 37.500 0.00 0.00 0.00 2.83
678 1354 6.151004 GGCGGTTAAACTATTTTGCTTGTTA 58.849 36.000 0.00 0.00 0.00 2.41
679 1355 6.809689 GGCGGTTAAACTATTTTGCTTGTTAT 59.190 34.615 0.00 0.00 0.00 1.89
680 1356 7.329962 GGCGGTTAAACTATTTTGCTTGTTATT 59.670 33.333 0.00 0.00 0.00 1.40
681 1357 8.705134 GCGGTTAAACTATTTTGCTTGTTATTT 58.295 29.630 0.00 0.00 0.00 1.40
696 1372 9.926158 TGCTTGTTATTTCATTTCACAATATGT 57.074 25.926 0.00 0.00 0.00 2.29
705 1381 8.828688 TTCATTTCACAATATGTTTGAATGCA 57.171 26.923 0.00 0.00 29.15 3.96
706 1382 8.828688 TCATTTCACAATATGTTTGAATGCAA 57.171 26.923 0.00 0.00 29.15 4.08
707 1383 9.269453 TCATTTCACAATATGTTTGAATGCAAA 57.731 25.926 0.00 0.00 41.47 3.68
710 1386 8.828688 TTCACAATATGTTTGAATGCAAATCA 57.171 26.923 1.18 3.25 45.01 2.57
711 1387 8.828688 TCACAATATGTTTGAATGCAAATCAA 57.171 26.923 12.72 12.72 45.01 2.57
712 1388 9.438228 TCACAATATGTTTGAATGCAAATCAAT 57.562 25.926 16.26 7.11 45.01 2.57
713 1389 9.484326 CACAATATGTTTGAATGCAAATCAATG 57.516 29.630 16.26 13.10 45.01 2.82
714 1390 9.221933 ACAATATGTTTGAATGCAAATCAATGT 57.778 25.926 16.26 13.59 45.01 2.71
722 1398 9.894783 TTTGAATGCAAATCAATGTAAAATTGG 57.105 25.926 16.26 0.00 38.99 3.16
723 1399 8.041829 TGAATGCAAATCAATGTAAAATTGGG 57.958 30.769 3.28 0.00 0.00 4.12
724 1400 7.664731 TGAATGCAAATCAATGTAAAATTGGGT 59.335 29.630 3.28 0.00 0.00 4.51
725 1401 6.798315 TGCAAATCAATGTAAAATTGGGTG 57.202 33.333 0.00 0.00 0.00 4.61
726 1402 5.704515 TGCAAATCAATGTAAAATTGGGTGG 59.295 36.000 0.00 0.00 0.00 4.61
727 1403 5.391843 GCAAATCAATGTAAAATTGGGTGGC 60.392 40.000 0.00 0.00 0.00 5.01
728 1404 3.971245 TCAATGTAAAATTGGGTGGCC 57.029 42.857 0.00 0.00 0.00 5.36
729 1405 3.242867 TCAATGTAAAATTGGGTGGCCA 58.757 40.909 0.00 0.00 0.00 5.36
730 1406 3.260380 TCAATGTAAAATTGGGTGGCCAG 59.740 43.478 5.11 0.00 0.00 4.85
731 1407 0.972883 TGTAAAATTGGGTGGCCAGC 59.027 50.000 27.04 27.04 0.00 4.85
753 1429 1.895131 GGCCATGCCTATACATTTGGG 59.105 52.381 0.00 0.00 46.69 4.12
754 1430 2.597455 GCCATGCCTATACATTTGGGT 58.403 47.619 0.00 0.00 0.00 4.51
755 1431 2.965147 GCCATGCCTATACATTTGGGTT 59.035 45.455 0.00 0.00 0.00 4.11
756 1432 3.243839 GCCATGCCTATACATTTGGGTTG 60.244 47.826 0.00 0.00 0.00 3.77
757 1433 3.321682 CCATGCCTATACATTTGGGTTGG 59.678 47.826 0.00 0.00 0.00 3.77
758 1434 2.383855 TGCCTATACATTTGGGTTGGC 58.616 47.619 0.00 0.00 39.53 4.52
759 1435 2.291865 TGCCTATACATTTGGGTTGGCA 60.292 45.455 0.00 0.00 45.51 4.92
760 1436 2.965147 GCCTATACATTTGGGTTGGCAT 59.035 45.455 0.00 0.00 38.99 4.40
761 1437 3.243839 GCCTATACATTTGGGTTGGCATG 60.244 47.826 0.00 0.00 38.99 4.06
762 1438 3.960102 CCTATACATTTGGGTTGGCATGT 59.040 43.478 0.00 0.00 34.27 3.21
763 1439 4.405358 CCTATACATTTGGGTTGGCATGTT 59.595 41.667 0.00 0.00 32.15 2.71
764 1440 2.547299 ACATTTGGGTTGGCATGTTG 57.453 45.000 0.00 0.00 0.00 3.33
765 1441 2.045524 ACATTTGGGTTGGCATGTTGA 58.954 42.857 0.00 0.00 0.00 3.18
766 1442 2.037511 ACATTTGGGTTGGCATGTTGAG 59.962 45.455 0.00 0.00 0.00 3.02
767 1443 0.392336 TTTGGGTTGGCATGTTGAGC 59.608 50.000 0.00 0.00 0.00 4.26
768 1444 1.804396 TTGGGTTGGCATGTTGAGCG 61.804 55.000 0.00 0.00 0.00 5.03
769 1445 2.268076 GGGTTGGCATGTTGAGCGT 61.268 57.895 0.00 0.00 0.00 5.07
770 1446 1.081242 GGTTGGCATGTTGAGCGTG 60.081 57.895 0.00 0.00 37.17 5.34
783 1459 4.830765 GCGTGCTGCCGACCCATA 62.831 66.667 13.37 0.00 37.76 2.74
784 1460 2.108976 CGTGCTGCCGACCCATAT 59.891 61.111 0.00 0.00 0.00 1.78
785 1461 1.365999 CGTGCTGCCGACCCATATA 59.634 57.895 0.00 0.00 0.00 0.86
786 1462 0.249699 CGTGCTGCCGACCCATATAA 60.250 55.000 0.00 0.00 0.00 0.98
787 1463 1.808512 CGTGCTGCCGACCCATATAAA 60.809 52.381 0.00 0.00 0.00 1.40
788 1464 1.602377 GTGCTGCCGACCCATATAAAC 59.398 52.381 0.00 0.00 0.00 2.01
789 1465 0.865769 GCTGCCGACCCATATAAACG 59.134 55.000 0.00 0.00 0.00 3.60
790 1466 1.508632 CTGCCGACCCATATAAACGG 58.491 55.000 0.00 0.00 45.26 4.44
791 1467 1.069513 CTGCCGACCCATATAAACGGA 59.930 52.381 0.00 0.00 45.31 4.69
792 1468 1.202557 TGCCGACCCATATAAACGGAC 60.203 52.381 0.00 0.00 45.31 4.79
793 1469 1.774639 CCGACCCATATAAACGGACG 58.225 55.000 0.00 0.00 45.31 4.79
794 1470 1.134226 CGACCCATATAAACGGACGC 58.866 55.000 0.00 0.00 0.00 5.19
795 1471 1.505425 GACCCATATAAACGGACGCC 58.495 55.000 0.00 0.00 0.00 5.68
814 1490 3.673484 GACGGACGGTCGACCCAA 61.673 66.667 28.52 0.00 35.61 4.12
815 1491 3.211564 GACGGACGGTCGACCCAAA 62.212 63.158 28.52 0.00 35.61 3.28
816 1492 2.263540 CGGACGGTCGACCCAAAT 59.736 61.111 28.52 11.88 0.00 2.32
817 1493 2.098233 CGGACGGTCGACCCAAATG 61.098 63.158 28.52 16.36 0.00 2.32
818 1494 1.743995 GGACGGTCGACCCAAATGG 60.744 63.158 28.52 15.62 41.37 3.16
819 1495 1.294138 GACGGTCGACCCAAATGGA 59.706 57.895 28.52 0.00 37.39 3.41
820 1496 1.004200 ACGGTCGACCCAAATGGAC 60.004 57.895 28.52 0.58 37.39 4.02
821 1497 1.004320 CGGTCGACCCAAATGGACA 60.004 57.895 28.52 0.00 37.39 4.02
822 1498 0.604243 CGGTCGACCCAAATGGACAA 60.604 55.000 28.52 0.00 37.39 3.18
823 1499 1.611519 GGTCGACCCAAATGGACAAA 58.388 50.000 24.75 0.00 37.39 2.83
824 1500 1.957877 GGTCGACCCAAATGGACAAAA 59.042 47.619 24.75 0.00 37.39 2.44
825 1501 2.362717 GGTCGACCCAAATGGACAAAAA 59.637 45.455 24.75 0.00 37.39 1.94
852 1528 3.065306 TCCGTTTGGATCGGCAGT 58.935 55.556 0.00 0.00 46.49 4.40
853 1529 1.373435 TCCGTTTGGATCGGCAGTT 59.627 52.632 0.00 0.00 46.49 3.16
854 1530 0.953471 TCCGTTTGGATCGGCAGTTG 60.953 55.000 0.00 0.00 46.49 3.16
855 1531 1.154225 CGTTTGGATCGGCAGTTGC 60.154 57.895 0.00 0.00 41.14 4.17
856 1532 1.577328 CGTTTGGATCGGCAGTTGCT 61.577 55.000 3.88 0.00 41.70 3.91
857 1533 0.169009 GTTTGGATCGGCAGTTGCTC 59.831 55.000 3.88 0.00 41.70 4.26
858 1534 0.036732 TTTGGATCGGCAGTTGCTCT 59.963 50.000 3.88 0.00 41.70 4.09
859 1535 0.901827 TTGGATCGGCAGTTGCTCTA 59.098 50.000 3.88 0.00 41.70 2.43
860 1536 0.901827 TGGATCGGCAGTTGCTCTAA 59.098 50.000 3.88 0.00 41.70 2.10
861 1537 1.291132 GGATCGGCAGTTGCTCTAAC 58.709 55.000 3.88 0.00 41.70 2.34
863 1539 2.197577 GATCGGCAGTTGCTCTAACTC 58.802 52.381 3.88 0.00 46.55 3.01
864 1540 1.257743 TCGGCAGTTGCTCTAACTCT 58.742 50.000 3.88 0.00 46.55 3.24
865 1541 1.202582 TCGGCAGTTGCTCTAACTCTC 59.797 52.381 3.88 0.00 46.55 3.20
866 1542 1.737363 CGGCAGTTGCTCTAACTCTCC 60.737 57.143 3.88 0.00 46.55 3.71
933 1614 2.345641 CCACACGCTCACTTTATTCTCG 59.654 50.000 0.00 0.00 0.00 4.04
957 1666 0.454196 ACGCAGCCGAAAAACACTTT 59.546 45.000 0.00 0.00 38.29 2.66
984 1693 0.884514 CTCTCCTCTGCTCGACAACA 59.115 55.000 0.00 0.00 0.00 3.33
986 1695 1.474478 TCTCCTCTGCTCGACAACATC 59.526 52.381 0.00 0.00 0.00 3.06
1089 1798 3.164269 CCCACCCCATCCTCCTCG 61.164 72.222 0.00 0.00 0.00 4.63
1093 1802 2.201490 CCCCATCCTCCTCGCCTA 59.799 66.667 0.00 0.00 0.00 3.93
1095 1804 2.565645 CCCATCCTCCTCGCCTACG 61.566 68.421 0.00 0.00 42.01 3.51
1115 1824 3.616721 AGGTGTGTCTCCGCGCTT 61.617 61.111 5.56 0.00 0.00 4.68
1136 1845 2.248431 GCGTGTTCGTGCTTCCAC 59.752 61.111 0.00 0.00 39.49 4.02
1138 1847 1.564622 CGTGTTCGTGCTTCCACTG 59.435 57.895 0.00 0.00 39.86 3.66
1160 1869 3.055891 GGCACCCAATCTGCTGTTTTTAT 60.056 43.478 0.00 0.00 34.84 1.40
1166 1875 8.632679 CACCCAATCTGCTGTTTTTATGTATAT 58.367 33.333 0.00 0.00 0.00 0.86
1267 1976 2.528743 GCCCGATCGTGCTGTCATG 61.529 63.158 15.63 0.00 0.00 3.07
1271 1980 1.469079 CCGATCGTGCTGTCATGTGTA 60.469 52.381 15.09 0.00 0.00 2.90
1284 1993 2.428171 TCATGTGTAGCCGGTACTAACC 59.572 50.000 1.90 0.00 42.95 2.85
1285 1994 2.220653 TGTGTAGCCGGTACTAACCT 57.779 50.000 1.90 0.00 44.35 3.50
1298 2007 5.126061 CGGTACTAACCTGAAGCTTACCTTA 59.874 44.000 0.00 0.00 44.35 2.69
1308 2017 6.879458 CCTGAAGCTTACCTTATGTGTACTTT 59.121 38.462 0.00 0.00 32.78 2.66
1378 2096 0.179234 TGTTTCTGCGTTCAGTGGGA 59.821 50.000 0.00 0.00 41.10 4.37
1492 2210 0.915364 GTTCCTGGATGCTTCCTCCT 59.085 55.000 18.67 0.00 43.07 3.69
1545 2263 7.217070 GCATTAGCTAAAATCGAACTTTGACTG 59.783 37.037 10.85 0.00 37.91 3.51
1555 2273 9.653287 AAATCGAACTTTGACTGTCAATATCTA 57.347 29.630 22.60 13.42 36.11 1.98
1577 2295 8.990163 TCTACAAAGATATTTGGATTAACCCC 57.010 34.615 16.65 0.00 38.00 4.95
1578 2296 6.709018 ACAAAGATATTTGGATTAACCCCG 57.291 37.500 16.65 0.00 38.00 5.73
1579 2297 5.068591 ACAAAGATATTTGGATTAACCCCGC 59.931 40.000 16.65 0.00 38.00 6.13
1580 2298 3.408634 AGATATTTGGATTAACCCCGCG 58.591 45.455 0.00 0.00 38.00 6.46
1581 2299 1.970092 TATTTGGATTAACCCCGCGG 58.030 50.000 21.04 21.04 38.00 6.46
1582 2300 0.256464 ATTTGGATTAACCCCGCGGA 59.744 50.000 30.73 6.25 38.00 5.54
1583 2301 0.037877 TTTGGATTAACCCCGCGGAA 59.962 50.000 30.73 13.96 38.00 4.30
1584 2302 0.037877 TTGGATTAACCCCGCGGAAA 59.962 50.000 30.73 15.52 38.00 3.13
1585 2303 0.037877 TGGATTAACCCCGCGGAAAA 59.962 50.000 30.73 15.13 38.00 2.29
1586 2304 1.175654 GGATTAACCCCGCGGAAAAA 58.824 50.000 30.73 15.51 0.00 1.94
1721 2447 8.356000 ACTATCTAGGCTATATCTGTGTTTCC 57.644 38.462 0.00 0.00 0.00 3.13
1783 2509 5.163784 GGTAAAATCCTTCTTTACGTGGAGC 60.164 44.000 0.00 0.00 39.24 4.70
1824 2550 5.809001 TCTTGTTGTTCAGCTAGGATCATT 58.191 37.500 0.00 0.00 0.00 2.57
1876 2602 5.393027 CGGAGATTGGTTTGGAGGTTTATTG 60.393 44.000 0.00 0.00 0.00 1.90
2231 2959 5.722021 TCTTTTAAAATCTTCCAGGTGCC 57.278 39.130 0.09 0.00 0.00 5.01
2986 3714 2.664402 AACTTGCCTTCCAGTGATGT 57.336 45.000 0.00 0.00 0.00 3.06
3197 3925 5.039920 TGCCACTTCAAGAGTATGCATAT 57.960 39.130 10.16 0.00 39.20 1.78
3198 3926 6.173427 TGCCACTTCAAGAGTATGCATATA 57.827 37.500 10.16 0.00 39.20 0.86
3199 3927 5.991606 TGCCACTTCAAGAGTATGCATATAC 59.008 40.000 10.16 7.28 39.20 1.47
3208 3936 4.048970 AGTATGCATATACTCCCTCCGT 57.951 45.455 10.16 0.00 44.83 4.69
3209 3937 4.417437 AGTATGCATATACTCCCTCCGTT 58.583 43.478 10.16 0.00 44.83 4.44
3210 3938 3.963428 ATGCATATACTCCCTCCGTTC 57.037 47.619 0.00 0.00 0.00 3.95
3211 3939 1.968493 TGCATATACTCCCTCCGTTCC 59.032 52.381 0.00 0.00 0.00 3.62
3212 3940 1.067776 GCATATACTCCCTCCGTTCCG 60.068 57.143 0.00 0.00 0.00 4.30
3213 3941 2.511659 CATATACTCCCTCCGTTCCGA 58.488 52.381 0.00 0.00 0.00 4.55
3214 3942 2.734755 TATACTCCCTCCGTTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
3215 3943 2.083628 ATACTCCCTCCGTTCCGAAT 57.916 50.000 0.00 0.00 0.00 3.34
3216 3944 1.856629 TACTCCCTCCGTTCCGAATT 58.143 50.000 0.00 0.00 0.00 2.17
3217 3945 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
3218 3946 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
3219 3947 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
3220 3948 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
3221 3949 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3222 3950 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3223 3951 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3224 3952 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
3225 3953 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
3226 3954 1.266211 CGTTCCGAATTACTTGTCGCG 60.266 52.381 0.00 0.00 35.93 5.87
3227 3955 1.060122 GTTCCGAATTACTTGTCGCGG 59.940 52.381 6.13 0.00 40.06 6.46
3228 3956 0.458889 TCCGAATTACTTGTCGCGGG 60.459 55.000 6.13 0.00 39.24 6.13
3229 3957 0.738412 CCGAATTACTTGTCGCGGGT 60.738 55.000 6.13 3.16 35.93 5.28
3230 3958 1.469595 CCGAATTACTTGTCGCGGGTA 60.470 52.381 6.13 2.12 35.93 3.69
3231 3959 2.466846 CGAATTACTTGTCGCGGGTAT 58.533 47.619 6.13 0.00 0.00 2.73
3232 3960 2.217847 CGAATTACTTGTCGCGGGTATG 59.782 50.000 6.13 0.00 0.00 2.39
3233 3961 2.234300 ATTACTTGTCGCGGGTATGG 57.766 50.000 6.13 0.00 0.00 2.74
3234 3962 1.184431 TTACTTGTCGCGGGTATGGA 58.816 50.000 6.13 0.00 0.00 3.41
3235 3963 1.405872 TACTTGTCGCGGGTATGGAT 58.594 50.000 6.13 0.00 0.00 3.41
3236 3964 0.179084 ACTTGTCGCGGGTATGGATG 60.179 55.000 6.13 0.00 0.00 3.51
3237 3965 0.179084 CTTGTCGCGGGTATGGATGT 60.179 55.000 6.13 0.00 0.00 3.06
3238 3966 1.067974 CTTGTCGCGGGTATGGATGTA 59.932 52.381 6.13 0.00 0.00 2.29
3239 3967 1.334160 TGTCGCGGGTATGGATGTAT 58.666 50.000 6.13 0.00 0.00 2.29
3240 3968 1.271379 TGTCGCGGGTATGGATGTATC 59.729 52.381 6.13 0.00 0.00 2.24
3241 3969 1.544691 GTCGCGGGTATGGATGTATCT 59.455 52.381 6.13 0.00 0.00 1.98
3242 3970 2.751259 GTCGCGGGTATGGATGTATCTA 59.249 50.000 6.13 0.00 0.00 1.98
3243 3971 3.014623 TCGCGGGTATGGATGTATCTAG 58.985 50.000 6.13 0.00 0.00 2.43
3244 3972 3.014623 CGCGGGTATGGATGTATCTAGA 58.985 50.000 0.00 0.00 0.00 2.43
3245 3973 3.632604 CGCGGGTATGGATGTATCTAGAT 59.367 47.826 10.73 10.73 0.00 1.98
3246 3974 4.498177 CGCGGGTATGGATGTATCTAGATG 60.498 50.000 15.79 0.00 0.00 2.90
3247 3975 4.402793 GCGGGTATGGATGTATCTAGATGT 59.597 45.833 15.79 1.25 0.00 3.06
3248 3976 5.593095 GCGGGTATGGATGTATCTAGATGTA 59.407 44.000 15.79 4.44 0.00 2.29
3249 3977 6.265649 GCGGGTATGGATGTATCTAGATGTAT 59.734 42.308 15.79 9.11 0.00 2.29
3250 3978 7.201920 GCGGGTATGGATGTATCTAGATGTATT 60.202 40.741 15.79 0.00 0.00 1.89
3251 3979 8.696374 CGGGTATGGATGTATCTAGATGTATTT 58.304 37.037 15.79 0.00 0.00 1.40
3276 4004 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
3277 4005 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
3278 4006 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
3279 4007 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
3280 4008 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
3281 4009 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
3282 4010 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
3283 4011 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
3284 4012 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
3285 4013 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
3286 4014 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
3287 4015 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
3288 4016 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
3289 4017 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
3290 4018 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
3291 4019 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
3292 4020 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
3293 4021 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
3294 4022 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
3295 4023 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
3296 4024 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
3297 4025 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
3298 4026 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3299 4027 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3300 4028 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
3301 4029 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
3568 4303 8.981659 TCTCTTAAATGATGATGAAGTCTGGTA 58.018 33.333 0.00 0.00 0.00 3.25
3694 4429 2.787994 GCTGGAGCATTGCAGGTATAT 58.212 47.619 11.91 0.00 42.49 0.86
4057 4794 9.372541 CTTAATTTTGTGCATCAAATTGTCAAC 57.627 29.630 20.84 0.00 44.15 3.18
4059 4796 6.981762 TTTTGTGCATCAAATTGTCAACTT 57.018 29.167 12.95 0.00 44.15 2.66
4440 5177 3.974719 TCACTATCTCAGCTCAGGACTT 58.025 45.455 0.00 0.00 0.00 3.01
4451 5188 4.021894 CAGCTCAGGACTTACAGTTACACT 60.022 45.833 0.00 0.00 0.00 3.55
4559 5296 9.353999 CTGTTCTAAACTTATACCAAAAATGGC 57.646 33.333 0.00 0.00 0.00 4.40
4563 5300 3.093057 ACTTATACCAAAAATGGCGCCA 58.907 40.909 34.80 34.80 0.00 5.69
4806 5543 0.108945 GCCATTGCTGAACAAGAGCC 60.109 55.000 0.00 0.00 42.87 4.70
5075 5817 9.080097 ACTATGTATGAACTTGATACTACTCCC 57.920 37.037 0.86 0.00 0.00 4.30
5076 5818 9.303116 CTATGTATGAACTTGATACTACTCCCT 57.697 37.037 0.86 0.00 0.00 4.20
5077 5819 7.584122 TGTATGAACTTGATACTACTCCCTC 57.416 40.000 0.86 0.00 0.00 4.30
5078 5820 6.550108 TGTATGAACTTGATACTACTCCCTCC 59.450 42.308 0.86 0.00 0.00 4.30
5079 5821 3.952323 TGAACTTGATACTACTCCCTCCG 59.048 47.826 0.00 0.00 0.00 4.63
5080 5822 3.666345 ACTTGATACTACTCCCTCCGT 57.334 47.619 0.00 0.00 0.00 4.69
5081 5823 4.785346 ACTTGATACTACTCCCTCCGTA 57.215 45.455 0.00 0.00 0.00 4.02
5082 5824 5.121380 ACTTGATACTACTCCCTCCGTAA 57.879 43.478 0.00 0.00 0.00 3.18
5083 5825 5.513233 ACTTGATACTACTCCCTCCGTAAA 58.487 41.667 0.00 0.00 0.00 2.01
5084 5826 5.359292 ACTTGATACTACTCCCTCCGTAAAC 59.641 44.000 0.00 0.00 0.00 2.01
5085 5827 5.121380 TGATACTACTCCCTCCGTAAACT 57.879 43.478 0.00 0.00 0.00 2.66
5086 5828 6.252599 TGATACTACTCCCTCCGTAAACTA 57.747 41.667 0.00 0.00 0.00 2.24
5087 5829 6.662755 TGATACTACTCCCTCCGTAAACTAA 58.337 40.000 0.00 0.00 0.00 2.24
5088 5830 7.293073 TGATACTACTCCCTCCGTAAACTAAT 58.707 38.462 0.00 0.00 0.00 1.73
5089 5831 8.439971 TGATACTACTCCCTCCGTAAACTAATA 58.560 37.037 0.00 0.00 0.00 0.98
5090 5832 9.460019 GATACTACTCCCTCCGTAAACTAATAT 57.540 37.037 0.00 0.00 0.00 1.28
5093 5835 9.294614 ACTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
5094 5836 9.512588 CTACTCCCTCCGTAAACTAATATAAGA 57.487 37.037 0.00 0.00 0.00 2.10
5095 5837 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
5096 5838 8.003629 ACTCCCTCCGTAAACTAATATAAGAGT 58.996 37.037 0.00 0.00 0.00 3.24
5097 5839 8.174733 TCCCTCCGTAAACTAATATAAGAGTG 57.825 38.462 0.00 0.00 0.00 3.51
5098 5840 7.781693 TCCCTCCGTAAACTAATATAAGAGTGT 59.218 37.037 0.00 0.00 0.00 3.55
5099 5841 8.419442 CCCTCCGTAAACTAATATAAGAGTGTT 58.581 37.037 0.00 0.00 0.00 3.32
5100 5842 9.813446 CCTCCGTAAACTAATATAAGAGTGTTT 57.187 33.333 0.00 0.00 0.00 2.83
5148 5890 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
5149 5891 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
5150 5892 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
5151 5893 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
5165 5907 5.615289 ACAGAGGGAGTATATGATTTGTGC 58.385 41.667 0.00 0.00 0.00 4.57
5354 6096 5.065914 GCTCCATAATTCATGCAGGACTTA 58.934 41.667 12.65 12.65 32.84 2.24
5388 6130 8.190326 TGAGTAGGAATTTTCTGTACTCTTCA 57.810 34.615 21.12 9.74 40.47 3.02
5569 6314 4.991056 TGATGAAGCTATAACTTCCATCGC 59.009 41.667 12.28 0.52 44.50 4.58
5598 6343 8.788325 TTTCCATATGATCAGCATTCTATCAG 57.212 34.615 3.65 0.00 38.44 2.90
5619 6364 3.165071 GCCGGGGATTCATTTCCATATT 58.835 45.455 2.18 0.00 37.53 1.28
5656 6401 3.567397 TCCCGGAATTCCTGTTTTCAAA 58.433 40.909 22.05 0.00 0.00 2.69
5749 6494 9.301153 GTAAATCACTTGTTCATTGTGAAGTTT 57.699 29.630 11.01 10.45 42.80 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 1.302431 TGATGGACCAACACGGCAG 60.302 57.895 0.00 0.00 39.03 4.85
73 74 0.606604 AGCCACTGAATAACGGTCGT 59.393 50.000 0.00 0.00 35.72 4.34
76 77 0.981183 TGGAGCCACTGAATAACGGT 59.019 50.000 0.00 0.00 38.85 4.83
82 83 1.683011 CCCGAAATGGAGCCACTGAAT 60.683 52.381 0.00 0.00 42.00 2.57
86 87 2.044946 GCCCGAAATGGAGCCACT 60.045 61.111 0.00 0.00 42.00 4.00
162 163 3.467374 ACGGGTTTGTTGCATCAAAAT 57.533 38.095 21.35 7.78 38.71 1.82
163 164 2.932614 CAACGGGTTTGTTGCATCAAAA 59.067 40.909 21.35 4.90 42.34 2.44
196 197 0.806241 GAAACCGGCAGCGGAATTTA 59.194 50.000 8.49 0.00 0.00 1.40
206 207 1.135527 CCTACTCATACGAAACCGGCA 59.864 52.381 0.00 0.00 0.00 5.69
214 215 5.079689 TGAAAACATGCCTACTCATACGA 57.920 39.130 0.00 0.00 0.00 3.43
215 216 5.794687 TTGAAAACATGCCTACTCATACG 57.205 39.130 0.00 0.00 0.00 3.06
239 240 5.601313 AGCCGACCACTCCTTTTCTAATATA 59.399 40.000 0.00 0.00 0.00 0.86
240 241 4.409247 AGCCGACCACTCCTTTTCTAATAT 59.591 41.667 0.00 0.00 0.00 1.28
248 249 1.568504 TCATAGCCGACCACTCCTTT 58.431 50.000 0.00 0.00 0.00 3.11
250 251 1.043816 CATCATAGCCGACCACTCCT 58.956 55.000 0.00 0.00 0.00 3.69
277 278 2.219080 TGGCATCCTCTTTGCATTCA 57.781 45.000 0.00 0.00 41.95 2.57
280 281 1.315690 CGATGGCATCCTCTTTGCAT 58.684 50.000 21.20 0.00 41.95 3.96
296 297 2.025887 AGGAGAAACCAATCTTGCCGAT 60.026 45.455 0.00 0.00 42.04 4.18
367 368 5.965922 ACGTACTTGTCAATGAGATCATCA 58.034 37.500 0.00 0.00 43.70 3.07
369 370 5.352284 GGACGTACTTGTCAATGAGATCAT 58.648 41.667 0.00 0.00 40.72 2.45
383 384 1.329906 CTCGCTCATACGGACGTACTT 59.670 52.381 6.73 0.00 33.01 2.24
406 407 7.212976 ACTTATACAGTGATTCTAGGCATGTG 58.787 38.462 0.00 0.00 32.83 3.21
418 419 4.878397 GCCTTGCAGAACTTATACAGTGAT 59.122 41.667 0.00 0.00 35.12 3.06
421 422 4.256920 CAGCCTTGCAGAACTTATACAGT 58.743 43.478 0.00 0.00 37.30 3.55
483 484 2.931969 CAATCACGCATGTCTTCAGCTA 59.068 45.455 0.00 0.00 0.00 3.32
505 1181 0.657840 GCAGTTGCACGTGAGTTTCT 59.342 50.000 22.23 6.54 46.40 2.52
542 1218 4.769345 TGCCAACATGAGTCCACATATA 57.231 40.909 0.00 0.00 0.00 0.86
571 1247 9.906660 TTGCAAACGAATAAAAGAAGATACATT 57.093 25.926 0.00 0.00 0.00 2.71
584 1260 8.747666 GTTTCACATAGTTTTGCAAACGAATAA 58.252 29.630 12.39 0.00 0.00 1.40
585 1261 7.915923 TGTTTCACATAGTTTTGCAAACGAATA 59.084 29.630 12.39 2.21 0.00 1.75
586 1262 6.754209 TGTTTCACATAGTTTTGCAAACGAAT 59.246 30.769 12.39 0.00 0.00 3.34
587 1263 6.093404 TGTTTCACATAGTTTTGCAAACGAA 58.907 32.000 12.39 0.00 0.00 3.85
588 1264 5.641709 TGTTTCACATAGTTTTGCAAACGA 58.358 33.333 12.39 4.34 0.00 3.85
589 1265 5.940603 TGTTTCACATAGTTTTGCAAACG 57.059 34.783 12.39 0.96 0.00 3.60
590 1266 9.553418 AAAAATGTTTCACATAGTTTTGCAAAC 57.447 25.926 12.39 7.48 37.97 2.93
630 1306 9.274206 GCCCAAATAAATGGTAAACTTTTACAA 57.726 29.630 12.71 3.19 43.64 2.41
631 1307 7.599245 CGCCCAAATAAATGGTAAACTTTTACA 59.401 33.333 12.71 1.73 43.64 2.41
632 1308 7.063662 CCGCCCAAATAAATGGTAAACTTTTAC 59.936 37.037 3.63 3.63 41.68 2.01
633 1309 7.097834 CCGCCCAAATAAATGGTAAACTTTTA 58.902 34.615 0.00 0.00 38.91 1.52
634 1310 5.935206 CCGCCCAAATAAATGGTAAACTTTT 59.065 36.000 0.00 0.00 38.91 2.27
635 1311 5.012251 ACCGCCCAAATAAATGGTAAACTTT 59.988 36.000 0.00 0.00 38.91 2.66
636 1312 4.528987 ACCGCCCAAATAAATGGTAAACTT 59.471 37.500 0.00 0.00 38.91 2.66
637 1313 4.090819 ACCGCCCAAATAAATGGTAAACT 58.909 39.130 0.00 0.00 38.91 2.66
638 1314 4.459390 ACCGCCCAAATAAATGGTAAAC 57.541 40.909 0.00 0.00 38.91 2.01
639 1315 6.600882 TTAACCGCCCAAATAAATGGTAAA 57.399 33.333 0.00 0.00 38.91 2.01
640 1316 6.210984 AGTTTAACCGCCCAAATAAATGGTAA 59.789 34.615 0.00 0.00 38.91 2.85
641 1317 5.715753 AGTTTAACCGCCCAAATAAATGGTA 59.284 36.000 0.00 0.00 38.91 3.25
642 1318 4.528987 AGTTTAACCGCCCAAATAAATGGT 59.471 37.500 0.00 0.00 38.91 3.55
643 1319 5.079689 AGTTTAACCGCCCAAATAAATGG 57.920 39.130 0.00 0.00 40.35 3.16
644 1320 8.710835 AAATAGTTTAACCGCCCAAATAAATG 57.289 30.769 0.00 0.00 0.00 2.32
645 1321 9.157104 CAAAATAGTTTAACCGCCCAAATAAAT 57.843 29.630 0.00 0.00 0.00 1.40
646 1322 7.117956 GCAAAATAGTTTAACCGCCCAAATAAA 59.882 33.333 0.00 0.00 0.00 1.40
647 1323 6.590677 GCAAAATAGTTTAACCGCCCAAATAA 59.409 34.615 0.00 0.00 0.00 1.40
648 1324 6.071278 AGCAAAATAGTTTAACCGCCCAAATA 60.071 34.615 0.00 0.00 0.00 1.40
649 1325 4.932799 GCAAAATAGTTTAACCGCCCAAAT 59.067 37.500 0.00 0.00 0.00 2.32
650 1326 4.039366 AGCAAAATAGTTTAACCGCCCAAA 59.961 37.500 0.00 0.00 0.00 3.28
651 1327 3.574826 AGCAAAATAGTTTAACCGCCCAA 59.425 39.130 0.00 0.00 0.00 4.12
652 1328 3.158676 AGCAAAATAGTTTAACCGCCCA 58.841 40.909 0.00 0.00 0.00 5.36
653 1329 3.861276 AGCAAAATAGTTTAACCGCCC 57.139 42.857 0.00 0.00 0.00 6.13
654 1330 4.552355 ACAAGCAAAATAGTTTAACCGCC 58.448 39.130 0.00 0.00 0.00 6.13
655 1331 7.806149 ATAACAAGCAAAATAGTTTAACCGC 57.194 32.000 0.00 0.00 0.00 5.68
670 1346 9.926158 ACATATTGTGAAATGAAATAACAAGCA 57.074 25.926 0.00 0.00 34.50 3.91
679 1355 9.269453 TGCATTCAAACATATTGTGAAATGAAA 57.731 25.926 11.16 1.33 35.07 2.69
680 1356 8.828688 TGCATTCAAACATATTGTGAAATGAA 57.171 26.923 11.16 0.00 35.07 2.57
681 1357 8.828688 TTGCATTCAAACATATTGTGAAATGA 57.171 26.923 11.16 0.00 35.07 2.57
684 1360 9.269453 TGATTTGCATTCAAACATATTGTGAAA 57.731 25.926 0.00 0.00 44.11 2.69
685 1361 8.828688 TGATTTGCATTCAAACATATTGTGAA 57.171 26.923 0.00 0.00 44.11 3.18
686 1362 8.828688 TTGATTTGCATTCAAACATATTGTGA 57.171 26.923 9.47 0.00 44.11 3.58
687 1363 9.484326 CATTGATTTGCATTCAAACATATTGTG 57.516 29.630 14.40 4.78 44.11 3.33
688 1364 9.221933 ACATTGATTTGCATTCAAACATATTGT 57.778 25.926 14.40 10.83 44.11 2.71
696 1372 9.894783 CCAATTTTACATTGATTTGCATTCAAA 57.105 25.926 14.40 0.00 45.24 2.69
697 1373 8.512956 CCCAATTTTACATTGATTTGCATTCAA 58.487 29.630 13.19 13.19 37.49 2.69
698 1374 7.664731 ACCCAATTTTACATTGATTTGCATTCA 59.335 29.630 0.00 0.00 0.00 2.57
699 1375 7.964011 CACCCAATTTTACATTGATTTGCATTC 59.036 33.333 0.00 0.00 0.00 2.67
700 1376 7.094291 CCACCCAATTTTACATTGATTTGCATT 60.094 33.333 0.00 0.00 0.00 3.56
701 1377 6.374894 CCACCCAATTTTACATTGATTTGCAT 59.625 34.615 0.00 0.00 0.00 3.96
702 1378 5.704515 CCACCCAATTTTACATTGATTTGCA 59.295 36.000 0.00 0.00 0.00 4.08
703 1379 5.391843 GCCACCCAATTTTACATTGATTTGC 60.392 40.000 0.00 0.00 0.00 3.68
704 1380 5.123661 GGCCACCCAATTTTACATTGATTTG 59.876 40.000 0.00 0.00 0.00 2.32
705 1381 5.222007 TGGCCACCCAATTTTACATTGATTT 60.222 36.000 0.00 0.00 38.46 2.17
706 1382 4.288105 TGGCCACCCAATTTTACATTGATT 59.712 37.500 0.00 0.00 38.46 2.57
707 1383 3.843027 TGGCCACCCAATTTTACATTGAT 59.157 39.130 0.00 0.00 38.46 2.57
708 1384 3.242867 TGGCCACCCAATTTTACATTGA 58.757 40.909 0.00 0.00 38.46 2.57
709 1385 3.598299 CTGGCCACCCAATTTTACATTG 58.402 45.455 0.00 0.00 41.58 2.82
710 1386 2.027285 GCTGGCCACCCAATTTTACATT 60.027 45.455 0.00 0.00 41.58 2.71
711 1387 1.554617 GCTGGCCACCCAATTTTACAT 59.445 47.619 0.00 0.00 41.58 2.29
712 1388 0.972883 GCTGGCCACCCAATTTTACA 59.027 50.000 0.00 0.00 41.58 2.41
713 1389 0.249120 GGCTGGCCACCCAATTTTAC 59.751 55.000 12.59 0.00 41.58 2.01
714 1390 1.254284 CGGCTGGCCACCCAATTTTA 61.254 55.000 17.48 0.00 41.58 1.52
715 1391 2.582493 CGGCTGGCCACCCAATTTT 61.582 57.895 17.48 0.00 41.58 1.82
716 1392 2.996734 CGGCTGGCCACCCAATTT 60.997 61.111 17.48 0.00 41.58 1.82
734 1410 2.597455 ACCCAAATGTATAGGCATGGC 58.403 47.619 12.14 12.14 0.00 4.40
735 1411 3.321682 CCAACCCAAATGTATAGGCATGG 59.678 47.826 0.00 0.00 0.00 3.66
736 1412 3.243839 GCCAACCCAAATGTATAGGCATG 60.244 47.826 0.00 0.00 40.50 4.06
737 1413 2.965147 GCCAACCCAAATGTATAGGCAT 59.035 45.455 0.00 0.00 40.50 4.40
738 1414 2.383855 GCCAACCCAAATGTATAGGCA 58.616 47.619 0.00 0.00 40.50 4.75
739 1415 2.383855 TGCCAACCCAAATGTATAGGC 58.616 47.619 0.00 0.00 41.15 3.93
740 1416 3.960102 ACATGCCAACCCAAATGTATAGG 59.040 43.478 0.00 0.00 31.63 2.57
741 1417 5.126869 TCAACATGCCAACCCAAATGTATAG 59.873 40.000 0.00 0.00 33.04 1.31
742 1418 5.019470 TCAACATGCCAACCCAAATGTATA 58.981 37.500 0.00 0.00 33.04 1.47
743 1419 3.837146 TCAACATGCCAACCCAAATGTAT 59.163 39.130 0.00 0.00 33.04 2.29
744 1420 3.234353 TCAACATGCCAACCCAAATGTA 58.766 40.909 0.00 0.00 33.04 2.29
745 1421 2.037511 CTCAACATGCCAACCCAAATGT 59.962 45.455 0.00 0.00 34.79 2.71
746 1422 2.690786 CTCAACATGCCAACCCAAATG 58.309 47.619 0.00 0.00 0.00 2.32
747 1423 1.002315 GCTCAACATGCCAACCCAAAT 59.998 47.619 0.00 0.00 0.00 2.32
748 1424 0.392336 GCTCAACATGCCAACCCAAA 59.608 50.000 0.00 0.00 0.00 3.28
749 1425 1.804396 CGCTCAACATGCCAACCCAA 61.804 55.000 0.00 0.00 0.00 4.12
750 1426 2.267351 CGCTCAACATGCCAACCCA 61.267 57.895 0.00 0.00 0.00 4.51
751 1427 2.268076 ACGCTCAACATGCCAACCC 61.268 57.895 0.00 0.00 0.00 4.11
752 1428 1.081242 CACGCTCAACATGCCAACC 60.081 57.895 0.00 0.00 0.00 3.77
753 1429 1.730547 GCACGCTCAACATGCCAAC 60.731 57.895 0.00 0.00 28.98 3.77
754 1430 1.898094 AGCACGCTCAACATGCCAA 60.898 52.632 0.00 0.00 38.57 4.52
755 1431 2.281692 AGCACGCTCAACATGCCA 60.282 55.556 0.00 0.00 38.57 4.92
756 1432 2.177531 CAGCACGCTCAACATGCC 59.822 61.111 0.00 0.00 38.57 4.40
757 1433 2.503375 GCAGCACGCTCAACATGC 60.503 61.111 0.00 0.00 37.88 4.06
758 1434 2.177531 GGCAGCACGCTCAACATG 59.822 61.111 0.00 0.00 41.91 3.21
759 1435 3.425713 CGGCAGCACGCTCAACAT 61.426 61.111 0.00 0.00 41.91 2.71
760 1436 4.600576 TCGGCAGCACGCTCAACA 62.601 61.111 0.00 0.00 41.91 3.33
761 1437 4.077188 GTCGGCAGCACGCTCAAC 62.077 66.667 0.00 0.00 41.91 3.18
766 1442 2.709125 TATATGGGTCGGCAGCACGC 62.709 60.000 0.00 0.00 41.28 5.34
767 1443 0.249699 TTATATGGGTCGGCAGCACG 60.250 55.000 0.00 0.00 0.00 5.34
768 1444 1.602377 GTTTATATGGGTCGGCAGCAC 59.398 52.381 0.00 0.00 0.00 4.40
769 1445 1.808512 CGTTTATATGGGTCGGCAGCA 60.809 52.381 0.00 0.00 0.00 4.41
770 1446 0.865769 CGTTTATATGGGTCGGCAGC 59.134 55.000 0.00 0.00 0.00 5.25
771 1447 1.069513 TCCGTTTATATGGGTCGGCAG 59.930 52.381 0.00 0.00 40.81 4.85
772 1448 1.121378 TCCGTTTATATGGGTCGGCA 58.879 50.000 0.00 0.00 40.81 5.69
773 1449 1.505425 GTCCGTTTATATGGGTCGGC 58.495 55.000 0.00 0.00 40.81 5.54
774 1450 1.774639 CGTCCGTTTATATGGGTCGG 58.225 55.000 0.00 0.00 42.12 4.79
775 1451 1.134226 GCGTCCGTTTATATGGGTCG 58.866 55.000 0.00 0.00 34.13 4.79
776 1452 1.505425 GGCGTCCGTTTATATGGGTC 58.495 55.000 0.00 0.00 0.00 4.46
777 1453 0.249573 CGGCGTCCGTTTATATGGGT 60.250 55.000 9.69 0.00 42.73 4.51
778 1454 0.947180 CCGGCGTCCGTTTATATGGG 60.947 60.000 15.38 0.00 46.80 4.00
779 1455 0.032403 TCCGGCGTCCGTTTATATGG 59.968 55.000 15.38 0.51 46.80 2.74
780 1456 1.134226 GTCCGGCGTCCGTTTATATG 58.866 55.000 15.38 1.12 46.80 1.78
781 1457 0.318107 CGTCCGGCGTCCGTTTATAT 60.318 55.000 15.38 0.00 46.80 0.86
782 1458 1.063972 CGTCCGGCGTCCGTTTATA 59.936 57.895 15.38 0.00 46.80 0.98
783 1459 2.202650 CGTCCGGCGTCCGTTTAT 60.203 61.111 15.38 0.00 46.80 1.40
784 1460 4.418401 CCGTCCGGCGTCCGTTTA 62.418 66.667 15.38 0.67 46.80 2.01
797 1473 2.496828 ATTTGGGTCGACCGTCCGTC 62.497 60.000 27.68 13.52 44.64 4.79
798 1474 2.576832 ATTTGGGTCGACCGTCCGT 61.577 57.895 27.68 10.15 44.64 4.69
799 1475 2.098233 CATTTGGGTCGACCGTCCG 61.098 63.158 27.68 11.46 44.64 4.79
800 1476 1.743995 CCATTTGGGTCGACCGTCC 60.744 63.158 27.68 15.00 44.64 4.79
801 1477 1.017701 GTCCATTTGGGTCGACCGTC 61.018 60.000 27.68 15.75 44.64 4.79
802 1478 1.004200 GTCCATTTGGGTCGACCGT 60.004 57.895 27.68 11.23 44.64 4.83
803 1479 0.604243 TTGTCCATTTGGGTCGACCG 60.604 55.000 27.68 13.63 44.64 4.79
804 1480 1.611519 TTTGTCCATTTGGGTCGACC 58.388 50.000 27.04 27.04 38.11 4.79
805 1481 3.719173 TTTTTGTCCATTTGGGTCGAC 57.281 42.857 7.13 7.13 38.11 4.20
824 1500 4.260620 CGATCCAAACGGATAGCGATTTTT 60.261 41.667 0.00 0.00 43.70 1.94
825 1501 3.247648 CGATCCAAACGGATAGCGATTTT 59.752 43.478 0.00 0.00 43.70 1.82
826 1502 2.800544 CGATCCAAACGGATAGCGATTT 59.199 45.455 0.00 0.00 43.70 2.17
827 1503 2.404215 CGATCCAAACGGATAGCGATT 58.596 47.619 0.00 0.00 43.70 3.34
828 1504 2.065993 CGATCCAAACGGATAGCGAT 57.934 50.000 0.00 0.00 43.70 4.58
829 1505 3.562639 CGATCCAAACGGATAGCGA 57.437 52.632 0.00 0.00 43.70 4.93
837 1513 1.154225 GCAACTGCCGATCCAAACG 60.154 57.895 0.00 0.00 34.31 3.60
838 1514 0.169009 GAGCAACTGCCGATCCAAAC 59.831 55.000 0.00 0.00 43.38 2.93
839 1515 0.036732 AGAGCAACTGCCGATCCAAA 59.963 50.000 0.00 0.00 43.38 3.28
840 1516 0.901827 TAGAGCAACTGCCGATCCAA 59.098 50.000 0.00 0.00 43.38 3.53
841 1517 0.901827 TTAGAGCAACTGCCGATCCA 59.098 50.000 0.00 0.00 43.38 3.41
842 1518 1.134670 AGTTAGAGCAACTGCCGATCC 60.135 52.381 0.00 0.00 46.01 3.36
843 1519 2.301577 AGTTAGAGCAACTGCCGATC 57.698 50.000 0.00 0.00 46.01 3.69
855 1531 2.360844 TCACGCTCTGGAGAGTTAGAG 58.639 52.381 4.34 0.00 43.85 2.43
856 1532 2.488545 GTTCACGCTCTGGAGAGTTAGA 59.511 50.000 4.34 0.00 43.85 2.10
857 1533 2.416162 GGTTCACGCTCTGGAGAGTTAG 60.416 54.545 4.34 1.04 43.85 2.34
858 1534 1.544691 GGTTCACGCTCTGGAGAGTTA 59.455 52.381 4.34 0.00 43.85 2.24
859 1535 0.318762 GGTTCACGCTCTGGAGAGTT 59.681 55.000 4.34 0.00 43.85 3.01
860 1536 0.827925 TGGTTCACGCTCTGGAGAGT 60.828 55.000 5.57 1.33 43.85 3.24
861 1537 0.108898 CTGGTTCACGCTCTGGAGAG 60.109 60.000 1.35 0.00 44.75 3.20
862 1538 0.539669 TCTGGTTCACGCTCTGGAGA 60.540 55.000 1.35 0.00 0.00 3.71
863 1539 0.389166 GTCTGGTTCACGCTCTGGAG 60.389 60.000 0.00 0.00 0.00 3.86
864 1540 1.112916 TGTCTGGTTCACGCTCTGGA 61.113 55.000 0.00 0.00 0.00 3.86
865 1541 0.946221 GTGTCTGGTTCACGCTCTGG 60.946 60.000 0.00 0.00 0.00 3.86
866 1542 2.522060 GTGTCTGGTTCACGCTCTG 58.478 57.895 0.00 0.00 0.00 3.35
895 1576 5.470368 CGTGTGGACAAGAGAAGAGATAAA 58.530 41.667 0.00 0.00 0.00 1.40
896 1577 4.618460 GCGTGTGGACAAGAGAAGAGATAA 60.618 45.833 0.00 0.00 0.00 1.75
957 1666 2.175202 GAGCAGAGGAGAGTGGAGAAA 58.825 52.381 0.00 0.00 0.00 2.52
1072 1781 3.164269 CGAGGAGGATGGGGTGGG 61.164 72.222 0.00 0.00 0.00 4.61
1095 1804 2.430921 CGCGGAGACACACCTGTC 60.431 66.667 0.00 0.00 46.50 3.51
1115 1824 2.017783 GAAGCACGAACACGCGGTA 61.018 57.895 12.47 0.00 35.12 4.02
1136 1845 0.896940 AACAGCAGATTGGGTGCCAG 60.897 55.000 0.00 0.00 42.24 4.85
1138 1847 0.681175 AAAACAGCAGATTGGGTGCC 59.319 50.000 0.00 0.00 42.24 5.01
1166 1875 7.690637 GCGAATGTTTTTCTCACGTGATTATTA 59.309 33.333 20.40 2.15 0.00 0.98
1174 1883 2.869801 TCTGCGAATGTTTTTCTCACGT 59.130 40.909 0.00 0.00 0.00 4.49
1284 1993 7.907214 AAAGTACACATAAGGTAAGCTTCAG 57.093 36.000 0.00 0.00 0.00 3.02
1285 1994 8.685838 AAAAAGTACACATAAGGTAAGCTTCA 57.314 30.769 0.00 0.00 0.00 3.02
1308 2017 3.146066 ACGTTGCCAGCAAGAGATAAAA 58.854 40.909 5.07 0.00 36.52 1.52
1338 2052 1.735386 CAGTGTTCTCAGAGCCATGG 58.265 55.000 7.63 7.63 0.00 3.66
1339 2053 1.085091 GCAGTGTTCTCAGAGCCATG 58.915 55.000 0.00 0.00 0.00 3.66
1378 2096 1.228367 CCCAGCAGCAACCAGACTT 60.228 57.895 0.00 0.00 0.00 3.01
1555 2273 5.068591 GCGGGGTTAATCCAAATATCTTTGT 59.931 40.000 7.18 0.00 40.15 2.83
1586 2304 9.981460 ACTACCAATCCAAATATCTTTCTCTTT 57.019 29.630 0.00 0.00 0.00 2.52
1587 2305 9.401058 CACTACCAATCCAAATATCTTTCTCTT 57.599 33.333 0.00 0.00 0.00 2.85
1588 2306 8.552296 ACACTACCAATCCAAATATCTTTCTCT 58.448 33.333 0.00 0.00 0.00 3.10
1589 2307 8.738645 ACACTACCAATCCAAATATCTTTCTC 57.261 34.615 0.00 0.00 0.00 2.87
1592 2310 9.747898 TGTTACACTACCAATCCAAATATCTTT 57.252 29.630 0.00 0.00 0.00 2.52
1593 2311 9.174166 GTGTTACACTACCAATCCAAATATCTT 57.826 33.333 8.41 0.00 0.00 2.40
1594 2312 7.494625 CGTGTTACACTACCAATCCAAATATCT 59.505 37.037 13.86 0.00 31.34 1.98
1595 2313 7.279313 ACGTGTTACACTACCAATCCAAATATC 59.721 37.037 13.86 0.00 31.34 1.63
1596 2314 7.107542 ACGTGTTACACTACCAATCCAAATAT 58.892 34.615 13.86 0.00 31.34 1.28
1597 2315 6.465948 ACGTGTTACACTACCAATCCAAATA 58.534 36.000 13.86 0.00 31.34 1.40
1598 2316 5.310451 ACGTGTTACACTACCAATCCAAAT 58.690 37.500 13.86 0.00 31.34 2.32
1599 2317 4.706035 ACGTGTTACACTACCAATCCAAA 58.294 39.130 13.86 0.00 31.34 3.28
1600 2318 4.339872 ACGTGTTACACTACCAATCCAA 57.660 40.909 13.86 0.00 31.34 3.53
1601 2319 4.618927 GCTACGTGTTACACTACCAATCCA 60.619 45.833 13.86 0.00 31.34 3.41
1602 2320 3.861689 GCTACGTGTTACACTACCAATCC 59.138 47.826 13.86 0.00 31.34 3.01
1603 2321 3.861689 GGCTACGTGTTACACTACCAATC 59.138 47.826 13.86 0.00 31.34 2.67
1604 2322 3.258872 TGGCTACGTGTTACACTACCAAT 59.741 43.478 13.86 0.00 31.34 3.16
1605 2323 2.627221 TGGCTACGTGTTACACTACCAA 59.373 45.455 13.86 0.00 31.34 3.67
1606 2324 2.237643 TGGCTACGTGTTACACTACCA 58.762 47.619 13.86 11.72 31.34 3.25
1607 2325 3.302365 TTGGCTACGTGTTACACTACC 57.698 47.619 13.86 9.44 31.34 3.18
1824 2550 0.687354 GTCAGCCAAGAGAAGTCCCA 59.313 55.000 0.00 0.00 0.00 4.37
2231 2959 3.338249 TCGATCTTTTCCAGAGCCAAAG 58.662 45.455 0.00 0.00 34.02 2.77
2788 3516 4.906618 ACGAAAGGAATTACCACTGTGAT 58.093 39.130 9.86 0.00 42.04 3.06
3207 3935 1.060122 CCGCGACAAGTAATTCGGAAC 59.940 52.381 8.23 0.00 39.23 3.62
3208 3936 1.352114 CCGCGACAAGTAATTCGGAA 58.648 50.000 8.23 0.00 39.23 4.30
3209 3937 0.458889 CCCGCGACAAGTAATTCGGA 60.459 55.000 8.23 0.00 39.23 4.55
3210 3938 0.738412 ACCCGCGACAAGTAATTCGG 60.738 55.000 8.23 0.00 35.73 4.30
3211 3939 1.912001 TACCCGCGACAAGTAATTCG 58.088 50.000 8.23 0.00 38.31 3.34
3212 3940 2.542595 CCATACCCGCGACAAGTAATTC 59.457 50.000 8.23 0.00 0.00 2.17
3213 3941 2.168936 TCCATACCCGCGACAAGTAATT 59.831 45.455 8.23 0.00 0.00 1.40
3214 3942 1.758280 TCCATACCCGCGACAAGTAAT 59.242 47.619 8.23 0.00 0.00 1.89
3215 3943 1.184431 TCCATACCCGCGACAAGTAA 58.816 50.000 8.23 0.00 0.00 2.24
3216 3944 1.067974 CATCCATACCCGCGACAAGTA 59.932 52.381 8.23 4.04 0.00 2.24
3217 3945 0.179084 CATCCATACCCGCGACAAGT 60.179 55.000 8.23 1.45 0.00 3.16
3218 3946 0.179084 ACATCCATACCCGCGACAAG 60.179 55.000 8.23 0.00 0.00 3.16
3219 3947 1.112950 TACATCCATACCCGCGACAA 58.887 50.000 8.23 0.00 0.00 3.18
3220 3948 1.271379 GATACATCCATACCCGCGACA 59.729 52.381 8.23 0.00 0.00 4.35
3221 3949 1.544691 AGATACATCCATACCCGCGAC 59.455 52.381 8.23 0.00 0.00 5.19
3222 3950 1.919240 AGATACATCCATACCCGCGA 58.081 50.000 8.23 0.00 0.00 5.87
3223 3951 3.014623 TCTAGATACATCCATACCCGCG 58.985 50.000 0.00 0.00 0.00 6.46
3224 3952 4.402793 ACATCTAGATACATCCATACCCGC 59.597 45.833 4.54 0.00 0.00 6.13
3225 3953 7.825331 ATACATCTAGATACATCCATACCCG 57.175 40.000 4.54 0.00 0.00 5.28
3250 3978 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
3251 3979 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
3252 3980 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
3253 3981 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
3254 3982 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
3255 3983 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
3256 3984 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
3257 3985 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
3258 3986 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
3259 3987 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
3260 3988 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
3261 3989 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
3262 3990 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
3263 3991 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
3264 3992 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
3265 3993 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
3266 3994 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
3267 3995 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
3268 3996 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
3269 3997 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
3270 3998 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
3271 3999 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
3272 4000 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
3273 4001 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
3274 4002 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
3275 4003 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
3276 4004 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
3277 4005 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
3278 4006 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
3279 4007 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
3280 4008 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
3281 4009 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
3282 4010 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
3283 4011 4.286549 TGTTACTCCCTCCGTTCCAAATTA 59.713 41.667 0.00 0.00 0.00 1.40
3284 4012 3.073356 TGTTACTCCCTCCGTTCCAAATT 59.927 43.478 0.00 0.00 0.00 1.82
3285 4013 2.640826 TGTTACTCCCTCCGTTCCAAAT 59.359 45.455 0.00 0.00 0.00 2.32
3286 4014 2.038033 CTGTTACTCCCTCCGTTCCAAA 59.962 50.000 0.00 0.00 0.00 3.28
3287 4015 1.621814 CTGTTACTCCCTCCGTTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
3288 4016 1.263356 CTGTTACTCCCTCCGTTCCA 58.737 55.000 0.00 0.00 0.00 3.53
3289 4017 0.535797 CCTGTTACTCCCTCCGTTCC 59.464 60.000 0.00 0.00 0.00 3.62
3290 4018 1.553706 TCCTGTTACTCCCTCCGTTC 58.446 55.000 0.00 0.00 0.00 3.95
3291 4019 2.249309 ATCCTGTTACTCCCTCCGTT 57.751 50.000 0.00 0.00 0.00 4.44
3292 4020 3.614568 ATATCCTGTTACTCCCTCCGT 57.385 47.619 0.00 0.00 0.00 4.69
3293 4021 6.890814 ACTTATATATCCTGTTACTCCCTCCG 59.109 42.308 0.00 0.00 0.00 4.63
3294 4022 8.532819 CAACTTATATATCCTGTTACTCCCTCC 58.467 40.741 0.00 0.00 0.00 4.30
3295 4023 8.035984 GCAACTTATATATCCTGTTACTCCCTC 58.964 40.741 0.00 0.00 0.00 4.30
3296 4024 7.038231 GGCAACTTATATATCCTGTTACTCCCT 60.038 40.741 0.00 0.00 0.00 4.20
3297 4025 7.104290 GGCAACTTATATATCCTGTTACTCCC 58.896 42.308 0.00 0.00 0.00 4.30
3568 4303 4.809426 CAGGAGAACGTTGAAGTTGTAGTT 59.191 41.667 5.00 0.00 34.00 2.24
3973 4710 5.088739 CCAAAAAGTACATGATGCGAGTTC 58.911 41.667 0.00 0.00 0.00 3.01
4057 4794 7.645058 AGGAATTGGACACATATGGTTAAAG 57.355 36.000 7.80 0.00 0.00 1.85
4059 4796 6.951198 ACAAGGAATTGGACACATATGGTTAA 59.049 34.615 7.80 3.34 0.00 2.01
4283 5020 6.126623 TGTTACTGGGCAATCAATATACAGGA 60.127 38.462 0.00 0.00 0.00 3.86
4284 5021 6.061441 TGTTACTGGGCAATCAATATACAGG 58.939 40.000 0.00 0.00 0.00 4.00
4559 5296 2.103094 TCTGTGAGGAATAGGAATGGCG 59.897 50.000 0.00 0.00 0.00 5.69
4806 5543 2.868583 CAATGGTGATCCTTGTCTAGCG 59.131 50.000 0.00 0.00 34.23 4.26
5069 5811 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
5070 5812 8.003629 ACTCTTATATTAGTTTACGGAGGGAGT 58.996 37.037 0.00 0.00 0.00 3.85
5071 5813 8.298140 CACTCTTATATTAGTTTACGGAGGGAG 58.702 40.741 0.00 0.00 0.00 4.30
5072 5814 7.781693 ACACTCTTATATTAGTTTACGGAGGGA 59.218 37.037 0.00 0.00 0.00 4.20
5073 5815 7.949434 ACACTCTTATATTAGTTTACGGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
5074 5816 9.813446 AAACACTCTTATATTAGTTTACGGAGG 57.187 33.333 0.00 0.00 0.00 4.30
5122 5864 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
5123 5865 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
5124 5866 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
5125 5867 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
5126 5868 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
5137 5879 8.993424 ACAAATCATATACTCCCTCTGTAAACT 58.007 33.333 0.00 0.00 0.00 2.66
5138 5880 9.046296 CACAAATCATATACTCCCTCTGTAAAC 57.954 37.037 0.00 0.00 0.00 2.01
5139 5881 7.715249 GCACAAATCATATACTCCCTCTGTAAA 59.285 37.037 0.00 0.00 0.00 2.01
5140 5882 7.147567 TGCACAAATCATATACTCCCTCTGTAA 60.148 37.037 0.00 0.00 0.00 2.41
5141 5883 6.326323 TGCACAAATCATATACTCCCTCTGTA 59.674 38.462 0.00 0.00 0.00 2.74
5142 5884 5.130975 TGCACAAATCATATACTCCCTCTGT 59.869 40.000 0.00 0.00 0.00 3.41
5143 5885 5.614308 TGCACAAATCATATACTCCCTCTG 58.386 41.667 0.00 0.00 0.00 3.35
5144 5886 5.367937 ACTGCACAAATCATATACTCCCTCT 59.632 40.000 0.00 0.00 0.00 3.69
5145 5887 5.615289 ACTGCACAAATCATATACTCCCTC 58.385 41.667 0.00 0.00 0.00 4.30
5146 5888 5.636903 ACTGCACAAATCATATACTCCCT 57.363 39.130 0.00 0.00 0.00 4.20
5147 5889 6.204882 GGTAACTGCACAAATCATATACTCCC 59.795 42.308 0.00 0.00 0.00 4.30
5148 5890 7.190920 GGTAACTGCACAAATCATATACTCC 57.809 40.000 0.00 0.00 0.00 3.85
5185 5927 1.003118 TGTGCTGATGTCCCCTGTAAC 59.997 52.381 0.00 0.00 0.00 2.50
5354 6096 7.721399 ACAGAAAATTCCTACTCAGTTCATGTT 59.279 33.333 0.00 0.00 0.00 2.71
5388 6130 4.038271 TGCCTGAGAACAAAATCTCCAT 57.962 40.909 2.16 0.00 44.27 3.41
5528 6273 7.550906 GCTTCATCAAACTATTGTACTCTTCCT 59.449 37.037 0.00 0.00 37.79 3.36
5569 6314 7.228314 AGAATGCTGATCATATGGAAATTGG 57.772 36.000 2.13 0.00 34.33 3.16
5598 6343 2.286365 TATGGAAATGAATCCCCGGC 57.714 50.000 0.00 0.00 38.82 6.13
5619 6364 4.352893 TCCGGGATGATAGAATGCTGATA 58.647 43.478 0.00 0.00 0.00 2.15
5749 6494 1.112113 GGGCATCTCGAGGAGTAACA 58.888 55.000 13.56 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.