Multiple sequence alignment - TraesCS5A01G135500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G135500 | chr5A | 100.000 | 5804 | 0 | 0 | 1 | 5804 | 306495703 | 306489900 | 0.000000e+00 | 10719.0 |
1 | TraesCS5A01G135500 | chr5A | 100.000 | 582 | 0 | 0 | 6219 | 6800 | 306489485 | 306488904 | 0.000000e+00 | 1075.0 |
2 | TraesCS5A01G135500 | chr5A | 91.975 | 162 | 12 | 1 | 2281 | 2441 | 558675497 | 558675658 | 6.860000e-55 | 226.0 |
3 | TraesCS5A01G135500 | chr5A | 93.478 | 46 | 2 | 1 | 4851 | 4896 | 136984893 | 136984937 | 4.400000e-07 | 67.6 |
4 | TraesCS5A01G135500 | chr5B | 94.033 | 3117 | 117 | 41 | 872 | 3922 | 251562876 | 251559763 | 0.000000e+00 | 4662.0 |
5 | TraesCS5A01G135500 | chr5B | 96.589 | 645 | 16 | 4 | 4182 | 4823 | 251559362 | 251558721 | 0.000000e+00 | 1064.0 |
6 | TraesCS5A01G135500 | chr5B | 97.635 | 592 | 13 | 1 | 5213 | 5803 | 251558600 | 251558009 | 0.000000e+00 | 1014.0 |
7 | TraesCS5A01G135500 | chr5B | 85.746 | 898 | 78 | 19 | 1 | 880 | 251573270 | 251572405 | 0.000000e+00 | 904.0 |
8 | TraesCS5A01G135500 | chr5B | 91.922 | 359 | 14 | 5 | 6220 | 6573 | 251558007 | 251557659 | 7.930000e-134 | 488.0 |
9 | TraesCS5A01G135500 | chr5B | 92.105 | 114 | 9 | 0 | 6598 | 6711 | 251557665 | 251557552 | 1.960000e-35 | 161.0 |
10 | TraesCS5A01G135500 | chr5D | 95.903 | 1977 | 55 | 6 | 1980 | 3947 | 228063472 | 228061513 | 0.000000e+00 | 3179.0 |
11 | TraesCS5A01G135500 | chr5D | 90.708 | 2034 | 132 | 28 | 1 | 1992 | 228065621 | 228063603 | 0.000000e+00 | 2656.0 |
12 | TraesCS5A01G135500 | chr5D | 95.677 | 879 | 28 | 6 | 4929 | 5803 | 228060470 | 228059598 | 0.000000e+00 | 1404.0 |
13 | TraesCS5A01G135500 | chr5D | 96.904 | 646 | 13 | 5 | 4179 | 4821 | 228061112 | 228060471 | 0.000000e+00 | 1075.0 |
14 | TraesCS5A01G135500 | chr5D | 95.105 | 286 | 14 | 0 | 6280 | 6565 | 228059371 | 228059086 | 1.040000e-122 | 451.0 |
15 | TraesCS5A01G135500 | chr5D | 87.037 | 270 | 30 | 1 | 3942 | 4211 | 498779161 | 498779425 | 3.990000e-77 | 300.0 |
16 | TraesCS5A01G135500 | chr5D | 93.269 | 104 | 6 | 1 | 6608 | 6711 | 228059078 | 228058976 | 1.180000e-32 | 152.0 |
17 | TraesCS5A01G135500 | chr5D | 94.030 | 67 | 3 | 1 | 6220 | 6285 | 228059596 | 228059530 | 4.340000e-17 | 100.0 |
18 | TraesCS5A01G135500 | chr5D | 84.524 | 84 | 10 | 3 | 6708 | 6789 | 431905662 | 431905744 | 5.650000e-11 | 80.5 |
19 | TraesCS5A01G135500 | chr5D | 100.000 | 36 | 0 | 0 | 4897 | 4932 | 2138659 | 2138694 | 4.400000e-07 | 67.6 |
20 | TraesCS5A01G135500 | chr5D | 100.000 | 36 | 0 | 0 | 4897 | 4932 | 432992164 | 432992199 | 4.400000e-07 | 67.6 |
21 | TraesCS5A01G135500 | chr5D | 85.075 | 67 | 8 | 2 | 6709 | 6774 | 542610849 | 542610914 | 4.400000e-07 | 67.6 |
22 | TraesCS5A01G135500 | chr1D | 89.313 | 262 | 28 | 0 | 3950 | 4211 | 58580569 | 58580830 | 5.080000e-86 | 329.0 |
23 | TraesCS5A01G135500 | chr1D | 90.419 | 167 | 12 | 4 | 2270 | 2435 | 387944773 | 387944936 | 4.130000e-52 | 217.0 |
24 | TraesCS5A01G135500 | chr1D | 95.652 | 46 | 1 | 1 | 4851 | 4896 | 332264925 | 332264969 | 9.460000e-09 | 73.1 |
25 | TraesCS5A01G135500 | chr7A | 89.286 | 252 | 23 | 2 | 3962 | 4212 | 462341621 | 462341373 | 5.120000e-81 | 313.0 |
26 | TraesCS5A01G135500 | chr7A | 100.000 | 37 | 0 | 0 | 4897 | 4933 | 138348323 | 138348287 | 1.220000e-07 | 69.4 |
27 | TraesCS5A01G135500 | chr7A | 100.000 | 36 | 0 | 0 | 4897 | 4932 | 638844403 | 638844368 | 4.400000e-07 | 67.6 |
28 | TraesCS5A01G135500 | chr6B | 89.958 | 239 | 19 | 4 | 3977 | 4212 | 57702061 | 57701825 | 3.080000e-78 | 303.0 |
29 | TraesCS5A01G135500 | chr6B | 88.306 | 248 | 24 | 4 | 3965 | 4211 | 64857113 | 64856870 | 6.670000e-75 | 292.0 |
30 | TraesCS5A01G135500 | chr6B | 77.622 | 143 | 24 | 6 | 701 | 841 | 454070293 | 454070157 | 5.650000e-11 | 80.5 |
31 | TraesCS5A01G135500 | chr6B | 93.478 | 46 | 2 | 1 | 4851 | 4896 | 590564981 | 590565025 | 4.400000e-07 | 67.6 |
32 | TraesCS5A01G135500 | chr4A | 87.500 | 264 | 32 | 1 | 3949 | 4212 | 742458027 | 742457765 | 3.080000e-78 | 303.0 |
33 | TraesCS5A01G135500 | chr4A | 88.764 | 178 | 17 | 3 | 2281 | 2456 | 150653474 | 150653298 | 1.490000e-51 | 215.0 |
34 | TraesCS5A01G135500 | chr4A | 89.320 | 103 | 9 | 2 | 5124 | 5226 | 700021978 | 700022078 | 1.990000e-25 | 128.0 |
35 | TraesCS5A01G135500 | chr4A | 86.842 | 114 | 10 | 4 | 5117 | 5226 | 663252130 | 663252018 | 9.260000e-24 | 122.0 |
36 | TraesCS5A01G135500 | chr3A | 90.393 | 229 | 19 | 3 | 3954 | 4182 | 556284111 | 556284336 | 1.430000e-76 | 298.0 |
37 | TraesCS5A01G135500 | chr3A | 91.411 | 163 | 12 | 2 | 2281 | 2442 | 726769128 | 726768967 | 8.880000e-54 | 222.0 |
38 | TraesCS5A01G135500 | chr3A | 91.358 | 162 | 13 | 1 | 2281 | 2441 | 607058572 | 607058411 | 3.190000e-53 | 220.0 |
39 | TraesCS5A01G135500 | chr1B | 86.891 | 267 | 30 | 2 | 3946 | 4212 | 664021335 | 664021074 | 1.850000e-75 | 294.0 |
40 | TraesCS5A01G135500 | chr1B | 87.273 | 110 | 9 | 4 | 5121 | 5226 | 492303871 | 492303979 | 3.330000e-23 | 121.0 |
41 | TraesCS5A01G135500 | chr1B | 95.652 | 46 | 1 | 1 | 4851 | 4896 | 95235191 | 95235235 | 9.460000e-09 | 73.1 |
42 | TraesCS5A01G135500 | chr6A | 86.466 | 266 | 34 | 2 | 3949 | 4214 | 27087177 | 27086914 | 2.400000e-74 | 291.0 |
43 | TraesCS5A01G135500 | chr6A | 95.652 | 46 | 1 | 1 | 4851 | 4896 | 17663903 | 17663859 | 9.460000e-09 | 73.1 |
44 | TraesCS5A01G135500 | chr4D | 89.595 | 173 | 17 | 1 | 2279 | 2450 | 12520303 | 12520131 | 1.150000e-52 | 219.0 |
45 | TraesCS5A01G135500 | chr4D | 100.000 | 37 | 0 | 0 | 4897 | 4933 | 75783066 | 75783102 | 1.220000e-07 | 69.4 |
46 | TraesCS5A01G135500 | chr4D | 100.000 | 28 | 0 | 0 | 4821 | 4848 | 490943685 | 490943712 | 1.200000e-02 | 52.8 |
47 | TraesCS5A01G135500 | chr4B | 90.419 | 167 | 15 | 1 | 2277 | 2442 | 28724308 | 28724142 | 1.150000e-52 | 219.0 |
48 | TraesCS5A01G135500 | chrUn | 92.708 | 96 | 7 | 0 | 5131 | 5226 | 11850068 | 11850163 | 9.200000e-29 | 139.0 |
49 | TraesCS5A01G135500 | chrUn | 91.919 | 99 | 8 | 0 | 5131 | 5229 | 351755287 | 351755189 | 9.200000e-29 | 139.0 |
50 | TraesCS5A01G135500 | chrUn | 91.919 | 99 | 8 | 0 | 5131 | 5229 | 380526192 | 380526094 | 9.200000e-29 | 139.0 |
51 | TraesCS5A01G135500 | chrUn | 93.478 | 46 | 2 | 1 | 4851 | 4896 | 304744353 | 304744397 | 4.400000e-07 | 67.6 |
52 | TraesCS5A01G135500 | chrUn | 93.478 | 46 | 2 | 1 | 4851 | 4896 | 322088710 | 322088666 | 4.400000e-07 | 67.6 |
53 | TraesCS5A01G135500 | chr2A | 91.176 | 102 | 8 | 1 | 5125 | 5226 | 766966497 | 766966397 | 3.310000e-28 | 137.0 |
54 | TraesCS5A01G135500 | chr7D | 89.320 | 103 | 9 | 2 | 5124 | 5226 | 29293774 | 29293674 | 1.990000e-25 | 128.0 |
55 | TraesCS5A01G135500 | chr7D | 87.500 | 72 | 3 | 3 | 4865 | 4933 | 632024670 | 632024602 | 2.030000e-10 | 78.7 |
56 | TraesCS5A01G135500 | chr6D | 88.889 | 90 | 6 | 4 | 6709 | 6797 | 36547558 | 36547644 | 2.590000e-19 | 108.0 |
57 | TraesCS5A01G135500 | chr6D | 87.778 | 90 | 11 | 0 | 6708 | 6797 | 404320289 | 404320378 | 9.330000e-19 | 106.0 |
58 | TraesCS5A01G135500 | chr3D | 81.818 | 132 | 19 | 2 | 283 | 413 | 537919138 | 537919265 | 9.330000e-19 | 106.0 |
59 | TraesCS5A01G135500 | chr2B | 75.000 | 248 | 42 | 12 | 600 | 840 | 109302357 | 109302123 | 5.610000e-16 | 97.1 |
60 | TraesCS5A01G135500 | chr2B | 73.220 | 295 | 58 | 16 | 474 | 754 | 705224617 | 705224904 | 3.380000e-13 | 87.9 |
61 | TraesCS5A01G135500 | chr2B | 90.909 | 55 | 3 | 2 | 373 | 427 | 347101238 | 347101290 | 9.460000e-09 | 73.1 |
62 | TraesCS5A01G135500 | chr1A | 95.652 | 46 | 1 | 1 | 4851 | 4896 | 499947394 | 499947350 | 9.460000e-09 | 73.1 |
63 | TraesCS5A01G135500 | chr7B | 93.333 | 45 | 1 | 2 | 4897 | 4940 | 457401446 | 457401403 | 1.580000e-06 | 65.8 |
64 | TraesCS5A01G135500 | chr7B | 100.000 | 29 | 0 | 0 | 4821 | 4849 | 371732222 | 371732250 | 3.000000e-03 | 54.7 |
65 | TraesCS5A01G135500 | chr3B | 93.333 | 45 | 2 | 1 | 4897 | 4941 | 303626052 | 303626095 | 1.580000e-06 | 65.8 |
66 | TraesCS5A01G135500 | chr3B | 88.000 | 50 | 4 | 2 | 4897 | 4945 | 820454629 | 820454581 | 2.650000e-04 | 58.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G135500 | chr5A | 306488904 | 306495703 | 6799 | True | 5897.000000 | 10719 | 100.000000 | 1 | 6800 | 2 | chr5A.!!$R1 | 6799 |
1 | TraesCS5A01G135500 | chr5B | 251557552 | 251562876 | 5324 | True | 1477.800000 | 4662 | 94.456800 | 872 | 6711 | 5 | chr5B.!!$R2 | 5839 |
2 | TraesCS5A01G135500 | chr5B | 251572405 | 251573270 | 865 | True | 904.000000 | 904 | 85.746000 | 1 | 880 | 1 | chr5B.!!$R1 | 879 |
3 | TraesCS5A01G135500 | chr5D | 228058976 | 228065621 | 6645 | True | 1288.142857 | 3179 | 94.513714 | 1 | 6711 | 7 | chr5D.!!$R1 | 6710 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
660 | 679 | 0.036010 | ACTGCCCACGAGAGGATTTG | 60.036 | 55.0 | 0.00 | 0.0 | 0.00 | 2.32 | F |
1047 | 1076 | 0.246635 | CCACCATCGTCTTCTTCCGT | 59.753 | 55.0 | 0.00 | 0.0 | 0.00 | 4.69 | F |
1195 | 1225 | 0.396435 | ACGTCAGCAACAGGATGGAA | 59.604 | 50.0 | 0.00 | 0.0 | 43.62 | 3.53 | F |
1512 | 1552 | 0.397254 | AGTACCTGCTCGTATGGCCT | 60.397 | 55.0 | 3.32 | 0.0 | 0.00 | 5.19 | F |
2603 | 2805 | 1.179814 | AGGCTCTGTTCGGTTCGACT | 61.180 | 55.0 | 0.00 | 0.0 | 34.89 | 4.18 | F |
4277 | 4851 | 0.988832 | AGGATGGGCGGTGAGTTAAA | 59.011 | 50.0 | 0.00 | 0.0 | 0.00 | 1.52 | F |
4863 | 5469 | 0.034337 | CAAGAACCCTCCGTCCGAAA | 59.966 | 55.0 | 0.00 | 0.0 | 0.00 | 3.46 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1701 | 1749 | 1.000233 | CACAGGTAACGTGACGACCG | 61.000 | 60.000 | 13.70 | 8.82 | 41.53 | 4.79 | R |
2473 | 2671 | 1.197721 | GGCAAACAGTGTCTGATTCGG | 59.802 | 52.381 | 0.00 | 0.00 | 35.18 | 4.30 | R |
3120 | 3325 | 4.316722 | CGACGAGATATGCTTCTTTGAACG | 60.317 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 | R |
3276 | 3481 | 2.164219 | CCAGGCTGCAAATGTATTTCGT | 59.836 | 45.455 | 9.56 | 0.00 | 0.00 | 3.85 | R |
4286 | 4860 | 0.923358 | ACTCAAGGGACCCACAAACA | 59.077 | 50.000 | 14.60 | 0.00 | 0.00 | 2.83 | R |
5532 | 6142 | 0.739813 | GTCGTCCTGCGCCAAACTAT | 60.740 | 55.000 | 4.18 | 0.00 | 41.07 | 2.12 | R |
6713 | 7493 | 0.325296 | TTGGGGACGTAGCTGGAGAT | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
139 | 141 | 5.533482 | CCGACGGATCTATTCAAAAGATCT | 58.467 | 41.667 | 8.64 | 0.00 | 45.74 | 2.75 |
140 | 142 | 5.631512 | CCGACGGATCTATTCAAAAGATCTC | 59.368 | 44.000 | 8.64 | 3.63 | 45.74 | 2.75 |
173 | 175 | 3.804325 | AGTCATCCAATCTAACGCAATCG | 59.196 | 43.478 | 0.00 | 0.00 | 42.43 | 3.34 |
186 | 188 | 2.813908 | AATCGTCCGGTCAAGCGC | 60.814 | 61.111 | 0.00 | 0.00 | 0.00 | 5.92 |
204 | 206 | 1.401409 | CGCCATCGTCACTTTTGCAAT | 60.401 | 47.619 | 0.00 | 0.00 | 0.00 | 3.56 |
242 | 244 | 0.258774 | ACCCTTCTGCAACACTGGTT | 59.741 | 50.000 | 0.00 | 0.00 | 37.87 | 3.67 |
313 | 317 | 1.254284 | CCGCCCCCTTGTTGCAAATA | 61.254 | 55.000 | 0.00 | 0.00 | 0.00 | 1.40 |
316 | 320 | 2.631267 | GCCCCCTTGTTGCAAATATTG | 58.369 | 47.619 | 0.00 | 0.00 | 0.00 | 1.90 |
321 | 325 | 5.062528 | CCCCTTGTTGCAAATATTGTTTGT | 58.937 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
369 | 373 | 2.039974 | ACCGCATCGCATTGCTTGA | 61.040 | 52.632 | 7.12 | 0.00 | 40.54 | 3.02 |
412 | 416 | 1.133809 | CAGTCTGGTTGGGGAAGGGA | 61.134 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
415 | 419 | 1.140134 | TCTGGTTGGGGAAGGGAAGG | 61.140 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
418 | 422 | 1.432023 | GGTTGGGGAAGGGAAGGTGA | 61.432 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
447 | 452 | 2.825387 | GCGATGCAGCATGGGTCA | 60.825 | 61.111 | 14.22 | 0.00 | 35.86 | 4.02 |
454 | 459 | 1.035932 | GCAGCATGGGTCAGAGCATT | 61.036 | 55.000 | 1.20 | 0.00 | 35.86 | 3.56 |
485 | 502 | 2.582226 | GACGATCCGATGTGCGCA | 60.582 | 61.111 | 5.66 | 5.66 | 39.11 | 6.09 |
605 | 624 | 0.166814 | GAGCAACACATGAAGGCGTC | 59.833 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
625 | 644 | 2.970639 | CTTCACGGGGAGCTCGAA | 59.029 | 61.111 | 7.83 | 4.27 | 0.00 | 3.71 |
659 | 678 | 0.693049 | AACTGCCCACGAGAGGATTT | 59.307 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
660 | 679 | 0.036010 | ACTGCCCACGAGAGGATTTG | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
711 | 730 | 0.755686 | GGTTGGGGATTGCAACAACA | 59.244 | 50.000 | 23.86 | 10.67 | 43.61 | 3.33 |
712 | 731 | 1.270252 | GGTTGGGGATTGCAACAACAG | 60.270 | 52.381 | 23.86 | 0.00 | 43.61 | 3.16 |
733 | 752 | 4.453478 | CAGCTCAGTTGCAAAGTCTATTCA | 59.547 | 41.667 | 0.00 | 0.00 | 34.99 | 2.57 |
750 | 769 | 9.406113 | AGTCTATTCAAGGTAATACGTTACTCT | 57.594 | 33.333 | 0.00 | 0.00 | 40.06 | 3.24 |
753 | 772 | 6.741992 | TTCAAGGTAATACGTTACTCTCGA | 57.258 | 37.500 | 0.00 | 0.00 | 40.06 | 4.04 |
775 | 794 | 8.126871 | TCGAACGATCTGATTAAAATTCGATT | 57.873 | 30.769 | 15.17 | 3.44 | 41.05 | 3.34 |
824 | 844 | 1.840181 | GCGCATCGTTATCAGTCAGA | 58.160 | 50.000 | 0.30 | 0.00 | 0.00 | 3.27 |
938 | 960 | 8.722480 | AACATAATTCTCTCGAACATTCATCA | 57.278 | 30.769 | 0.00 | 0.00 | 30.67 | 3.07 |
1047 | 1076 | 0.246635 | CCACCATCGTCTTCTTCCGT | 59.753 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
1080 | 1109 | 4.787280 | CGACTCTGCCCTCCCCCT | 62.787 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
1164 | 1194 | 4.496927 | CGCCCGCTCCAAAATGGC | 62.497 | 66.667 | 0.00 | 0.00 | 37.47 | 4.40 |
1174 | 1204 | 0.897863 | CCAAAATGGCGGAGGTGGAA | 60.898 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1195 | 1225 | 0.396435 | ACGTCAGCAACAGGATGGAA | 59.604 | 50.000 | 0.00 | 0.00 | 43.62 | 3.53 |
1261 | 1291 | 2.592993 | CCCCGCCCTCTTTGACAGA | 61.593 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
1343 | 1382 | 2.570284 | CCGGCCCTTGGTTGGTTTC | 61.570 | 63.158 | 0.00 | 0.00 | 0.00 | 2.78 |
1344 | 1383 | 2.914908 | CGGCCCTTGGTTGGTTTCG | 61.915 | 63.158 | 0.00 | 0.00 | 0.00 | 3.46 |
1345 | 1384 | 2.338620 | GCCCTTGGTTGGTTTCGC | 59.661 | 61.111 | 0.00 | 0.00 | 0.00 | 4.70 |
1346 | 1385 | 2.642700 | CCCTTGGTTGGTTTCGCG | 59.357 | 61.111 | 0.00 | 0.00 | 0.00 | 5.87 |
1347 | 1386 | 1.894756 | CCCTTGGTTGGTTTCGCGA | 60.895 | 57.895 | 3.71 | 3.71 | 0.00 | 5.87 |
1348 | 1387 | 1.281656 | CCTTGGTTGGTTTCGCGAC | 59.718 | 57.895 | 9.15 | 0.00 | 0.00 | 5.19 |
1349 | 1388 | 1.281656 | CTTGGTTGGTTTCGCGACC | 59.718 | 57.895 | 9.15 | 9.62 | 40.23 | 4.79 |
1360 | 1400 | 4.436998 | CGCGACCCCTCCTCACAC | 62.437 | 72.222 | 0.00 | 0.00 | 0.00 | 3.82 |
1512 | 1552 | 0.397254 | AGTACCTGCTCGTATGGCCT | 60.397 | 55.000 | 3.32 | 0.00 | 0.00 | 5.19 |
1516 | 1556 | 4.221422 | TGCTCGTATGGCCTCCGC | 62.221 | 66.667 | 3.32 | 0.00 | 0.00 | 5.54 |
1701 | 1749 | 1.200020 | CGCAGGACCATTTGAAGGTTC | 59.800 | 52.381 | 0.00 | 0.00 | 40.09 | 3.62 |
1875 | 1923 | 1.338107 | TTCCAGAGGACGAGCTTCAA | 58.662 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
1943 | 1991 | 1.677552 | AGGTTTACCTCTGCACCCG | 59.322 | 57.895 | 0.00 | 0.00 | 44.77 | 5.28 |
2045 | 2242 | 9.213777 | TCAAACTGTGGGATACTTATATCTCTT | 57.786 | 33.333 | 0.00 | 0.00 | 38.89 | 2.85 |
2339 | 2536 | 2.294233 | TCCAATACGGACTACATACGGC | 59.706 | 50.000 | 0.00 | 0.00 | 39.64 | 5.68 |
2420 | 2618 | 8.841300 | CCTATTGGAATCTCTAAAAAGGCTTAC | 58.159 | 37.037 | 0.00 | 0.00 | 34.57 | 2.34 |
2435 | 2633 | 7.809546 | AAAGGCTTACATTTAGGAATAGAGC | 57.190 | 36.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2473 | 2671 | 7.608308 | TTTTGCATGGCCTGTTAATAATTTC | 57.392 | 32.000 | 3.32 | 0.00 | 0.00 | 2.17 |
2493 | 2691 | 1.197721 | CCGAATCAGACACTGTTTGCC | 59.802 | 52.381 | 0.00 | 0.00 | 32.61 | 4.52 |
2595 | 2797 | 7.478322 | TGTACTAGTTTATAAGGCTCTGTTCG | 58.522 | 38.462 | 0.00 | 0.00 | 0.00 | 3.95 |
2603 | 2805 | 1.179814 | AGGCTCTGTTCGGTTCGACT | 61.180 | 55.000 | 0.00 | 0.00 | 34.89 | 4.18 |
2785 | 2989 | 2.941453 | TTCGCACACTATCAGGTCTC | 57.059 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
3070 | 3274 | 8.026396 | TGTTCCCCATAGTAGTCCTTTTATAC | 57.974 | 38.462 | 0.00 | 0.00 | 0.00 | 1.47 |
3120 | 3325 | 8.697292 | AGGTGAATAGACAAAGTCTAGATAACC | 58.303 | 37.037 | 15.19 | 15.19 | 46.35 | 2.85 |
3276 | 3481 | 6.430925 | CACTCAATCCTTGTACTGATCCAAAA | 59.569 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
3316 | 3521 | 5.577945 | GCCTGGTTGATGTTATGTGAAAATG | 59.422 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3319 | 3524 | 7.329226 | CCTGGTTGATGTTATGTGAAAATGTTC | 59.671 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
3494 | 3699 | 9.661563 | ATCTGTCAAAACTTACGGTATCAATTA | 57.338 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
3575 | 3780 | 9.604626 | CAGTTTGTGCTCTTTTCTATTTTCTAG | 57.395 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
3874 | 4111 | 9.851686 | TTCTACATACCATTTCTTGAATATGCT | 57.148 | 29.630 | 0.00 | 0.00 | 31.98 | 3.79 |
3959 | 4532 | 5.318630 | TGTGTTAAACAAGTAATCCCTCCC | 58.681 | 41.667 | 0.00 | 0.00 | 35.24 | 4.30 |
4142 | 4715 | 6.619801 | ATTGATATCTTTTCCTACAACCGC | 57.380 | 37.500 | 3.98 | 0.00 | 0.00 | 5.68 |
4143 | 4716 | 5.092554 | TGATATCTTTTCCTACAACCGCA | 57.907 | 39.130 | 3.98 | 0.00 | 0.00 | 5.69 |
4144 | 4717 | 5.116180 | TGATATCTTTTCCTACAACCGCAG | 58.884 | 41.667 | 3.98 | 0.00 | 0.00 | 5.18 |
4145 | 4718 | 2.922740 | TCTTTTCCTACAACCGCAGT | 57.077 | 45.000 | 0.00 | 0.00 | 0.00 | 4.40 |
4146 | 4719 | 2.762745 | TCTTTTCCTACAACCGCAGTC | 58.237 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
4147 | 4720 | 2.103432 | TCTTTTCCTACAACCGCAGTCA | 59.897 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
4148 | 4721 | 2.623878 | TTTCCTACAACCGCAGTCAA | 57.376 | 45.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4149 | 4722 | 2.623878 | TTCCTACAACCGCAGTCAAA | 57.376 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4150 | 4723 | 1.873698 | TCCTACAACCGCAGTCAAAC | 58.126 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
4151 | 4724 | 1.414919 | TCCTACAACCGCAGTCAAACT | 59.585 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
4152 | 4725 | 2.158871 | TCCTACAACCGCAGTCAAACTT | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
4153 | 4726 | 2.616842 | CCTACAACCGCAGTCAAACTTT | 59.383 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
4154 | 4727 | 3.810941 | CCTACAACCGCAGTCAAACTTTA | 59.189 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
4155 | 4728 | 3.685836 | ACAACCGCAGTCAAACTTTAC | 57.314 | 42.857 | 0.00 | 0.00 | 0.00 | 2.01 |
4156 | 4729 | 3.275999 | ACAACCGCAGTCAAACTTTACT | 58.724 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
4157 | 4730 | 4.444536 | ACAACCGCAGTCAAACTTTACTA | 58.555 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
4158 | 4731 | 4.271776 | ACAACCGCAGTCAAACTTTACTAC | 59.728 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
4159 | 4732 | 3.054878 | ACCGCAGTCAAACTTTACTACG | 58.945 | 45.455 | 0.00 | 0.00 | 33.30 | 3.51 |
4160 | 4733 | 3.054878 | CCGCAGTCAAACTTTACTACGT | 58.945 | 45.455 | 0.00 | 0.00 | 31.93 | 3.57 |
4161 | 4734 | 3.492011 | CCGCAGTCAAACTTTACTACGTT | 59.508 | 43.478 | 0.00 | 0.00 | 31.93 | 3.99 |
4162 | 4735 | 4.025480 | CCGCAGTCAAACTTTACTACGTTT | 60.025 | 41.667 | 0.00 | 0.00 | 31.93 | 3.60 |
4163 | 4736 | 5.175491 | CCGCAGTCAAACTTTACTACGTTTA | 59.825 | 40.000 | 0.00 | 0.00 | 31.93 | 2.01 |
4164 | 4737 | 6.292274 | CCGCAGTCAAACTTTACTACGTTTAA | 60.292 | 38.462 | 0.00 | 0.00 | 31.93 | 1.52 |
4165 | 4738 | 6.567512 | CGCAGTCAAACTTTACTACGTTTAAC | 59.432 | 38.462 | 0.00 | 0.00 | 32.52 | 2.01 |
4166 | 4739 | 6.847792 | GCAGTCAAACTTTACTACGTTTAACC | 59.152 | 38.462 | 0.00 | 0.00 | 32.52 | 2.85 |
4167 | 4740 | 7.254556 | GCAGTCAAACTTTACTACGTTTAACCT | 60.255 | 37.037 | 0.00 | 0.00 | 32.52 | 3.50 |
4168 | 4741 | 9.248291 | CAGTCAAACTTTACTACGTTTAACCTA | 57.752 | 33.333 | 0.00 | 0.00 | 32.52 | 3.08 |
4169 | 4742 | 9.816354 | AGTCAAACTTTACTACGTTTAACCTAA | 57.184 | 29.630 | 0.00 | 0.00 | 32.52 | 2.69 |
4173 | 4746 | 9.816354 | AAACTTTACTACGTTTAACCTAAGACA | 57.184 | 29.630 | 0.00 | 0.00 | 32.05 | 3.41 |
4174 | 4747 | 9.816354 | AACTTTACTACGTTTAACCTAAGACAA | 57.184 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
4175 | 4748 | 9.816354 | ACTTTACTACGTTTAACCTAAGACAAA | 57.184 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
4206 | 4779 | 3.806958 | CGAACTAAAAAGAAACGGAGGC | 58.193 | 45.455 | 0.00 | 0.00 | 0.00 | 4.70 |
4207 | 4780 | 3.249080 | CGAACTAAAAAGAAACGGAGGCA | 59.751 | 43.478 | 0.00 | 0.00 | 0.00 | 4.75 |
4263 | 4837 | 5.062683 | CGTGTCTTTTGTGATGTCTAGGATG | 59.937 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4275 | 4849 | 1.063492 | TCTAGGATGGGCGGTGAGTTA | 60.063 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
4276 | 4850 | 1.760613 | CTAGGATGGGCGGTGAGTTAA | 59.239 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
4277 | 4851 | 0.988832 | AGGATGGGCGGTGAGTTAAA | 59.011 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
4341 | 4915 | 8.106247 | TGTACATGGAGTTTTCCTTCATTAAC | 57.894 | 34.615 | 0.00 | 0.00 | 44.36 | 2.01 |
4848 | 5454 | 5.429762 | AGATACATCCATTTGAGGGACAAGA | 59.570 | 40.000 | 0.00 | 0.00 | 39.77 | 3.02 |
4849 | 5455 | 4.387026 | ACATCCATTTGAGGGACAAGAA | 57.613 | 40.909 | 0.00 | 0.00 | 39.77 | 2.52 |
4850 | 5456 | 4.082125 | ACATCCATTTGAGGGACAAGAAC | 58.918 | 43.478 | 0.00 | 0.00 | 39.77 | 3.01 |
4851 | 5457 | 3.154827 | TCCATTTGAGGGACAAGAACC | 57.845 | 47.619 | 0.00 | 0.00 | 39.77 | 3.62 |
4857 | 5463 | 3.479979 | GGGACAAGAACCCTCCGT | 58.520 | 61.111 | 0.00 | 0.00 | 43.65 | 4.69 |
4858 | 5464 | 1.295746 | GGGACAAGAACCCTCCGTC | 59.704 | 63.158 | 0.00 | 0.00 | 43.65 | 4.79 |
4859 | 5465 | 1.295746 | GGACAAGAACCCTCCGTCC | 59.704 | 63.158 | 0.00 | 0.00 | 37.58 | 4.79 |
4860 | 5466 | 1.080025 | GACAAGAACCCTCCGTCCG | 60.080 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
4861 | 5467 | 1.530013 | GACAAGAACCCTCCGTCCGA | 61.530 | 60.000 | 0.00 | 0.00 | 0.00 | 4.55 |
4862 | 5468 | 1.117142 | ACAAGAACCCTCCGTCCGAA | 61.117 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4863 | 5469 | 0.034337 | CAAGAACCCTCCGTCCGAAA | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
4864 | 5470 | 0.760572 | AAGAACCCTCCGTCCGAAAA | 59.239 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4865 | 5471 | 0.760572 | AGAACCCTCCGTCCGAAAAA | 59.239 | 50.000 | 0.00 | 0.00 | 0.00 | 1.94 |
4866 | 5472 | 1.154197 | GAACCCTCCGTCCGAAAAAG | 58.846 | 55.000 | 0.00 | 0.00 | 0.00 | 2.27 |
4867 | 5473 | 0.887836 | AACCCTCCGTCCGAAAAAGC | 60.888 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4868 | 5474 | 1.003718 | CCCTCCGTCCGAAAAAGCT | 60.004 | 57.895 | 0.00 | 0.00 | 0.00 | 3.74 |
4869 | 5475 | 0.605589 | CCCTCCGTCCGAAAAAGCTT | 60.606 | 55.000 | 0.00 | 0.00 | 0.00 | 3.74 |
4870 | 5476 | 0.517316 | CCTCCGTCCGAAAAAGCTTG | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
4871 | 5477 | 0.110192 | CTCCGTCCGAAAAAGCTTGC | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
4872 | 5478 | 1.081442 | CCGTCCGAAAAAGCTTGCC | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 4.52 |
4873 | 5479 | 1.081442 | CGTCCGAAAAAGCTTGCCC | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 5.36 |
4874 | 5480 | 1.289066 | GTCCGAAAAAGCTTGCCCC | 59.711 | 57.895 | 0.00 | 0.00 | 0.00 | 5.80 |
4875 | 5481 | 1.152830 | TCCGAAAAAGCTTGCCCCT | 59.847 | 52.632 | 0.00 | 0.00 | 0.00 | 4.79 |
4876 | 5482 | 0.893727 | TCCGAAAAAGCTTGCCCCTC | 60.894 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4877 | 5483 | 1.178534 | CCGAAAAAGCTTGCCCCTCA | 61.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4878 | 5484 | 0.673437 | CGAAAAAGCTTGCCCCTCAA | 59.327 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4879 | 5485 | 1.068434 | CGAAAAAGCTTGCCCCTCAAA | 59.932 | 47.619 | 0.00 | 0.00 | 33.65 | 2.69 |
4880 | 5486 | 2.289010 | CGAAAAAGCTTGCCCCTCAAAT | 60.289 | 45.455 | 0.00 | 0.00 | 33.65 | 2.32 |
4881 | 5487 | 2.845363 | AAAAGCTTGCCCCTCAAATG | 57.155 | 45.000 | 0.00 | 0.00 | 33.65 | 2.32 |
4882 | 5488 | 0.978907 | AAAGCTTGCCCCTCAAATGG | 59.021 | 50.000 | 0.00 | 0.00 | 33.65 | 3.16 |
4883 | 5489 | 0.114954 | AAGCTTGCCCCTCAAATGGA | 59.885 | 50.000 | 0.00 | 0.00 | 33.65 | 3.41 |
4884 | 5490 | 0.337428 | AGCTTGCCCCTCAAATGGAT | 59.663 | 50.000 | 0.00 | 0.00 | 33.65 | 3.41 |
4885 | 5491 | 0.462789 | GCTTGCCCCTCAAATGGATG | 59.537 | 55.000 | 0.00 | 0.00 | 33.65 | 3.51 |
4886 | 5492 | 1.856629 | CTTGCCCCTCAAATGGATGT | 58.143 | 50.000 | 0.00 | 0.00 | 33.65 | 3.06 |
4887 | 5493 | 2.949963 | GCTTGCCCCTCAAATGGATGTA | 60.950 | 50.000 | 0.00 | 0.00 | 33.65 | 2.29 |
4888 | 5494 | 2.435372 | TGCCCCTCAAATGGATGTAC | 57.565 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
4889 | 5495 | 1.064017 | TGCCCCTCAAATGGATGTACC | 60.064 | 52.381 | 0.00 | 0.00 | 39.54 | 3.34 |
4890 | 5496 | 1.215423 | GCCCCTCAAATGGATGTACCT | 59.785 | 52.381 | 0.00 | 0.00 | 39.86 | 3.08 |
4891 | 5497 | 2.358195 | GCCCCTCAAATGGATGTACCTT | 60.358 | 50.000 | 0.00 | 0.00 | 39.86 | 3.50 |
4892 | 5498 | 3.117663 | GCCCCTCAAATGGATGTACCTTA | 60.118 | 47.826 | 0.00 | 0.00 | 39.86 | 2.69 |
4893 | 5499 | 4.718961 | CCCCTCAAATGGATGTACCTTAG | 58.281 | 47.826 | 0.00 | 0.00 | 39.86 | 2.18 |
4894 | 5500 | 4.137543 | CCCTCAAATGGATGTACCTTAGC | 58.862 | 47.826 | 0.00 | 0.00 | 39.86 | 3.09 |
4895 | 5501 | 4.385199 | CCCTCAAATGGATGTACCTTAGCA | 60.385 | 45.833 | 0.00 | 0.00 | 39.86 | 3.49 |
4896 | 5502 | 5.192927 | CCTCAAATGGATGTACCTTAGCAA | 58.807 | 41.667 | 0.00 | 0.00 | 39.86 | 3.91 |
4897 | 5503 | 5.829924 | CCTCAAATGGATGTACCTTAGCAAT | 59.170 | 40.000 | 0.00 | 0.00 | 39.86 | 3.56 |
4898 | 5504 | 6.322201 | CCTCAAATGGATGTACCTTAGCAATT | 59.678 | 38.462 | 0.00 | 0.00 | 39.86 | 2.32 |
4899 | 5505 | 7.147846 | CCTCAAATGGATGTACCTTAGCAATTT | 60.148 | 37.037 | 0.00 | 0.00 | 39.86 | 1.82 |
4900 | 5506 | 7.546358 | TCAAATGGATGTACCTTAGCAATTTG | 58.454 | 34.615 | 4.26 | 4.26 | 36.62 | 2.32 |
4901 | 5507 | 7.395772 | TCAAATGGATGTACCTTAGCAATTTGA | 59.604 | 33.333 | 7.88 | 7.88 | 39.25 | 2.69 |
4911 | 5517 | 2.299326 | AGCAATTTGAGGGACAAGCT | 57.701 | 45.000 | 0.00 | 0.00 | 39.77 | 3.74 |
4921 | 5527 | 1.133915 | AGGGACAAGCTTTTTCGGACA | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
4987 | 5594 | 7.450124 | TCACTGTTTTGGTAAAGTACAAACA | 57.550 | 32.000 | 0.00 | 0.55 | 36.42 | 2.83 |
4997 | 5604 | 7.936584 | TGGTAAAGTACAAACAAATTGAGAGG | 58.063 | 34.615 | 0.00 | 0.00 | 41.85 | 3.69 |
5016 | 5623 | 7.177878 | TGAGAGGAATTAGCAAAATCTCCTTT | 58.822 | 34.615 | 12.44 | 9.31 | 33.42 | 3.11 |
5061 | 5668 | 3.053693 | TGAGATAATGGGTTGAAGGGGTG | 60.054 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
5065 | 5672 | 1.739608 | ATGGGTTGAAGGGGTGCCTT | 61.740 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
5121 | 5728 | 8.469200 | TCCAAATAAAGAGACATGGCTATTTTG | 58.531 | 33.333 | 25.28 | 17.15 | 32.23 | 2.44 |
5132 | 5742 | 5.045578 | ACATGGCTATTTTGTACTCCTGTCT | 60.046 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5150 | 5760 | 3.830178 | TGTCTGGAAATACTTGTCGGAGA | 59.170 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
5151 | 5761 | 4.282449 | TGTCTGGAAATACTTGTCGGAGAA | 59.718 | 41.667 | 0.00 | 0.00 | 39.69 | 2.87 |
5158 | 5768 | 6.318900 | GGAAATACTTGTCGGAGAAATGGATT | 59.681 | 38.462 | 0.00 | 0.00 | 34.34 | 3.01 |
5197 | 5807 | 9.915629 | AAATACGTCTAGATACATCCATTTCTC | 57.084 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
5237 | 5847 | 5.424573 | GGTGAAGGGAGTACTTGTTAGGTAT | 59.575 | 44.000 | 0.00 | 0.00 | 0.00 | 2.73 |
5440 | 6050 | 2.417933 | GACAATGAGCATCGAACAAGCT | 59.582 | 45.455 | 4.96 | 4.96 | 42.17 | 3.74 |
5482 | 6092 | 1.259609 | TGGAGCAATGGCAAGAAAGG | 58.740 | 50.000 | 0.00 | 0.00 | 44.61 | 3.11 |
5532 | 6142 | 6.857492 | CTCCTCTTGGCACAAGGATGACAA | 62.857 | 50.000 | 15.42 | 0.00 | 43.55 | 3.18 |
5666 | 6276 | 6.403636 | CGGCTAAATTGAAAGCTATTGACACT | 60.404 | 38.462 | 7.42 | 0.00 | 38.80 | 3.55 |
5667 | 6277 | 6.749118 | GGCTAAATTGAAAGCTATTGACACTG | 59.251 | 38.462 | 7.42 | 0.00 | 38.80 | 3.66 |
5700 | 6312 | 3.943381 | ACCACATGTAGCTGATGTTCATG | 59.057 | 43.478 | 9.81 | 9.98 | 40.80 | 3.07 |
5768 | 6380 | 6.540189 | AGTGATCACCAGAGTACATTATTTGC | 59.460 | 38.462 | 22.21 | 0.00 | 0.00 | 3.68 |
5803 | 6415 | 5.385617 | GCGAGTGCATTATTTCATCCATAC | 58.614 | 41.667 | 0.00 | 0.00 | 42.15 | 2.39 |
6264 | 6876 | 9.642327 | CCATATCTCTATTGATATAGCATCTGC | 57.358 | 37.037 | 0.00 | 0.00 | 37.49 | 4.26 |
6299 | 7075 | 7.323420 | TCAACTAATTCTGATCTGTCGATGTT | 58.677 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
6327 | 7103 | 8.552296 | ACCAATCTATATCCTCTGAAGTTGTTT | 58.448 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
6341 | 7117 | 7.687941 | TGAAGTTGTTTTCAGGGATCTTATC | 57.312 | 36.000 | 0.00 | 0.00 | 32.39 | 1.75 |
6371 | 7147 | 2.020720 | TGCCATCAACACTGACGTTTT | 58.979 | 42.857 | 0.00 | 0.00 | 33.30 | 2.43 |
6518 | 7298 | 1.375908 | GTGGCAAGCAGGACATCGA | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 3.59 |
6565 | 7345 | 2.277591 | CGGTCGGGTAGGTGGACAA | 61.278 | 63.158 | 0.00 | 0.00 | 32.39 | 3.18 |
6573 | 7353 | 3.578716 | CGGGTAGGTGGACAATCTATGAT | 59.421 | 47.826 | 0.00 | 0.00 | 0.00 | 2.45 |
6574 | 7354 | 4.561530 | CGGGTAGGTGGACAATCTATGATG | 60.562 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
6575 | 7355 | 4.263068 | GGGTAGGTGGACAATCTATGATGG | 60.263 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6576 | 7356 | 4.593206 | GGTAGGTGGACAATCTATGATGGA | 59.407 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
6577 | 7357 | 5.071788 | GGTAGGTGGACAATCTATGATGGAA | 59.928 | 44.000 | 0.00 | 0.00 | 0.00 | 3.53 |
6578 | 7358 | 5.301835 | AGGTGGACAATCTATGATGGAAG | 57.698 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
6579 | 7359 | 4.723789 | AGGTGGACAATCTATGATGGAAGT | 59.276 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
6580 | 7360 | 4.818546 | GGTGGACAATCTATGATGGAAGTG | 59.181 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
6581 | 7361 | 5.431765 | GTGGACAATCTATGATGGAAGTGT | 58.568 | 41.667 | 0.00 | 0.00 | 0.00 | 3.55 |
6582 | 7362 | 5.882557 | GTGGACAATCTATGATGGAAGTGTT | 59.117 | 40.000 | 1.20 | 0.00 | 0.00 | 3.32 |
6583 | 7363 | 5.882000 | TGGACAATCTATGATGGAAGTGTTG | 59.118 | 40.000 | 1.20 | 0.00 | 0.00 | 3.33 |
6584 | 7364 | 5.220931 | GGACAATCTATGATGGAAGTGTTGC | 60.221 | 44.000 | 1.20 | 0.00 | 0.00 | 4.17 |
6585 | 7365 | 5.503927 | ACAATCTATGATGGAAGTGTTGCT | 58.496 | 37.500 | 0.00 | 0.00 | 0.00 | 3.91 |
6586 | 7366 | 6.653020 | ACAATCTATGATGGAAGTGTTGCTA | 58.347 | 36.000 | 0.00 | 0.00 | 0.00 | 3.49 |
6587 | 7367 | 7.112122 | ACAATCTATGATGGAAGTGTTGCTAA | 58.888 | 34.615 | 0.00 | 0.00 | 0.00 | 3.09 |
6588 | 7368 | 7.611467 | ACAATCTATGATGGAAGTGTTGCTAAA | 59.389 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
6589 | 7369 | 8.461222 | CAATCTATGATGGAAGTGTTGCTAAAA | 58.539 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
6590 | 7370 | 7.994425 | TCTATGATGGAAGTGTTGCTAAAAA | 57.006 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
6628 | 7408 | 5.221925 | TGGAAGTTATCAATCATAGGGGAGC | 60.222 | 44.000 | 0.00 | 0.00 | 0.00 | 4.70 |
6645 | 7425 | 4.415735 | GGGAGCGAATGAAAGATTTTGAC | 58.584 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
6712 | 7492 | 9.078753 | GTAAACAGAATAACTTCAGAGTAGAGC | 57.921 | 37.037 | 0.00 | 0.00 | 34.21 | 4.09 |
6713 | 7493 | 6.842437 | ACAGAATAACTTCAGAGTAGAGCA | 57.158 | 37.500 | 0.00 | 0.00 | 34.21 | 4.26 |
6714 | 7494 | 7.416964 | ACAGAATAACTTCAGAGTAGAGCAT | 57.583 | 36.000 | 0.00 | 0.00 | 34.21 | 3.79 |
6715 | 7495 | 7.488322 | ACAGAATAACTTCAGAGTAGAGCATC | 58.512 | 38.462 | 0.00 | 0.00 | 34.21 | 3.91 |
6716 | 7496 | 7.341769 | ACAGAATAACTTCAGAGTAGAGCATCT | 59.658 | 37.037 | 0.00 | 0.00 | 40.77 | 2.90 |
6717 | 7497 | 7.862372 | CAGAATAACTTCAGAGTAGAGCATCTC | 59.138 | 40.741 | 0.00 | 0.00 | 36.13 | 2.75 |
6718 | 7498 | 7.014230 | AGAATAACTTCAGAGTAGAGCATCTCC | 59.986 | 40.741 | 0.00 | 0.00 | 36.13 | 3.71 |
6727 | 7507 | 3.560826 | GAGCATCTCCAGCTACGTC | 57.439 | 57.895 | 0.00 | 0.00 | 43.58 | 4.34 |
6728 | 7508 | 0.031449 | GAGCATCTCCAGCTACGTCC | 59.969 | 60.000 | 0.00 | 0.00 | 43.58 | 4.79 |
6729 | 7509 | 1.068250 | GCATCTCCAGCTACGTCCC | 59.932 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
6730 | 7510 | 1.742768 | CATCTCCAGCTACGTCCCC | 59.257 | 63.158 | 0.00 | 0.00 | 0.00 | 4.81 |
6731 | 7511 | 1.043116 | CATCTCCAGCTACGTCCCCA | 61.043 | 60.000 | 0.00 | 0.00 | 0.00 | 4.96 |
6732 | 7512 | 0.325296 | ATCTCCAGCTACGTCCCCAA | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
6733 | 7513 | 1.218316 | CTCCAGCTACGTCCCCAAC | 59.782 | 63.158 | 0.00 | 0.00 | 0.00 | 3.77 |
6734 | 7514 | 1.534476 | TCCAGCTACGTCCCCAACA | 60.534 | 57.895 | 0.00 | 0.00 | 0.00 | 3.33 |
6735 | 7515 | 1.079127 | CCAGCTACGTCCCCAACAG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 3.16 |
6736 | 7516 | 1.079127 | CAGCTACGTCCCCAACAGG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
6737 | 7517 | 2.436115 | GCTACGTCCCCAACAGGC | 60.436 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
6738 | 7518 | 2.267961 | CTACGTCCCCAACAGGCC | 59.732 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
6739 | 7519 | 3.324108 | TACGTCCCCAACAGGCCC | 61.324 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
6740 | 7520 | 3.857521 | TACGTCCCCAACAGGCCCT | 62.858 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
6741 | 7521 | 4.410400 | CGTCCCCAACAGGCCCTC | 62.410 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
6742 | 7522 | 4.048470 | GTCCCCAACAGGCCCTCC | 62.048 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
6743 | 7523 | 4.608514 | TCCCCAACAGGCCCTCCA | 62.609 | 66.667 | 0.00 | 0.00 | 33.74 | 3.86 |
6744 | 7524 | 3.589542 | CCCCAACAGGCCCTCCAA | 61.590 | 66.667 | 0.00 | 0.00 | 33.74 | 3.53 |
6745 | 7525 | 2.036256 | CCCAACAGGCCCTCCAAG | 59.964 | 66.667 | 0.00 | 0.00 | 33.74 | 3.61 |
6746 | 7526 | 2.036256 | CCAACAGGCCCTCCAAGG | 59.964 | 66.667 | 0.00 | 0.00 | 34.30 | 3.61 |
6782 | 7562 | 2.746277 | CGCCGAAAACCCTCCCAG | 60.746 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
6783 | 7563 | 2.434774 | GCCGAAAACCCTCCCAGT | 59.565 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
6784 | 7564 | 1.674651 | GCCGAAAACCCTCCCAGTC | 60.675 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
6785 | 7565 | 1.375523 | CCGAAAACCCTCCCAGTCG | 60.376 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
6786 | 7566 | 2.033194 | CGAAAACCCTCCCAGTCGC | 61.033 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
6787 | 7567 | 2.032071 | AAAACCCTCCCAGTCGCG | 59.968 | 61.111 | 0.00 | 0.00 | 0.00 | 5.87 |
6788 | 7568 | 4.699522 | AAACCCTCCCAGTCGCGC | 62.700 | 66.667 | 0.00 | 0.00 | 0.00 | 6.86 |
6796 | 7576 | 4.069232 | CCAGTCGCGCCCTCAAGA | 62.069 | 66.667 | 0.00 | 0.00 | 0.00 | 3.02 |
6797 | 7577 | 2.185350 | CAGTCGCGCCCTCAAGAT | 59.815 | 61.111 | 0.00 | 0.00 | 0.00 | 2.40 |
6798 | 7578 | 2.169789 | CAGTCGCGCCCTCAAGATG | 61.170 | 63.158 | 0.00 | 0.00 | 0.00 | 2.90 |
6799 | 7579 | 3.567797 | GTCGCGCCCTCAAGATGC | 61.568 | 66.667 | 0.00 | 0.00 | 0.00 | 3.91 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
40 | 41 | 1.412343 | AGCAAACCAAAGATGCCGTTT | 59.588 | 42.857 | 0.00 | 0.00 | 40.93 | 3.60 |
43 | 44 | 2.262572 | GTAGCAAACCAAAGATGCCG | 57.737 | 50.000 | 0.00 | 0.00 | 40.93 | 5.69 |
78 | 79 | 5.279056 | CGGCCCAACAAATAAGGTCTAAAAA | 60.279 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
84 | 85 | 1.201414 | CACGGCCCAACAAATAAGGTC | 59.799 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
90 | 91 | 1.582610 | CGTAGCACGGCCCAACAAAT | 61.583 | 55.000 | 0.00 | 0.00 | 38.08 | 2.32 |
114 | 116 | 2.971660 | TTTGAATAGATCCGTCGGCA | 57.028 | 45.000 | 6.34 | 0.00 | 0.00 | 5.69 |
127 | 129 | 4.441634 | CGTAGACCGGGAGATCTTTTGAAT | 60.442 | 45.833 | 6.32 | 0.00 | 32.48 | 2.57 |
139 | 141 | 0.465097 | GGATGACTCGTAGACCGGGA | 60.465 | 60.000 | 6.32 | 0.00 | 40.44 | 5.14 |
140 | 142 | 0.750546 | TGGATGACTCGTAGACCGGG | 60.751 | 60.000 | 6.32 | 0.00 | 44.85 | 5.73 |
173 | 175 | 3.195698 | GATGGCGCTTGACCGGAC | 61.196 | 66.667 | 9.46 | 1.07 | 0.00 | 4.79 |
186 | 188 | 6.785191 | ACTTATATTGCAAAAGTGACGATGG | 58.215 | 36.000 | 12.97 | 0.00 | 32.38 | 3.51 |
242 | 244 | 8.803201 | TTCGTTACAAATATTGTTGCAATGAA | 57.197 | 26.923 | 0.59 | 0.00 | 42.22 | 2.57 |
295 | 299 | 0.823460 | ATATTTGCAACAAGGGGGCG | 59.177 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
297 | 301 | 3.979101 | ACAATATTTGCAACAAGGGGG | 57.021 | 42.857 | 0.00 | 0.00 | 0.00 | 5.40 |
338 | 342 | 1.812571 | GATGCGGTGACTTTCCACAAT | 59.187 | 47.619 | 0.00 | 0.00 | 38.74 | 2.71 |
369 | 373 | 2.685017 | TGCTCGAGGCCATGACCT | 60.685 | 61.111 | 15.58 | 0.00 | 45.04 | 3.85 |
412 | 416 | 0.251341 | GCCTCCAACACCATCACCTT | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 3.50 |
415 | 419 | 0.392998 | ATCGCCTCCAACACCATCAC | 60.393 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
418 | 422 | 1.750399 | GCATCGCCTCCAACACCAT | 60.750 | 57.895 | 0.00 | 0.00 | 0.00 | 3.55 |
447 | 452 | 2.545952 | CGCCGTCCAACTATAATGCTCT | 60.546 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
454 | 459 | 1.265095 | GATCGTCGCCGTCCAACTATA | 59.735 | 52.381 | 0.00 | 0.00 | 35.01 | 1.31 |
472 | 477 | 2.583319 | CGAGTGCGCACATCGGAT | 60.583 | 61.111 | 39.21 | 20.20 | 41.52 | 4.18 |
523 | 540 | 2.107141 | CGCATCTTCCCGTCTCCC | 59.893 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
591 | 610 | 2.731691 | AAGCCGACGCCTTCATGTGT | 62.732 | 55.000 | 0.00 | 0.00 | 34.57 | 3.72 |
605 | 624 | 4.821589 | GAGCTCCCCGTGAAGCCG | 62.822 | 72.222 | 0.87 | 0.00 | 0.00 | 5.52 |
625 | 644 | 2.032681 | GTTGCCTCCCGTGCTCTT | 59.967 | 61.111 | 0.00 | 0.00 | 0.00 | 2.85 |
646 | 665 | 2.246719 | GGATCCAAATCCTCTCGTGG | 57.753 | 55.000 | 6.95 | 0.00 | 46.97 | 4.94 |
659 | 678 | 5.951148 | TGATGTTTTGCTAAATCTGGATCCA | 59.049 | 36.000 | 15.27 | 15.27 | 0.00 | 3.41 |
660 | 679 | 6.096001 | AGTGATGTTTTGCTAAATCTGGATCC | 59.904 | 38.462 | 4.20 | 4.20 | 0.00 | 3.36 |
671 | 690 | 3.676172 | CCGTAACGAGTGATGTTTTGCTA | 59.324 | 43.478 | 0.00 | 0.00 | 0.00 | 3.49 |
677 | 696 | 2.409975 | CCAACCGTAACGAGTGATGTT | 58.590 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
711 | 730 | 4.645535 | TGAATAGACTTTGCAACTGAGCT | 58.354 | 39.130 | 0.00 | 0.00 | 34.99 | 4.09 |
712 | 731 | 5.362556 | TTGAATAGACTTTGCAACTGAGC | 57.637 | 39.130 | 0.00 | 0.00 | 0.00 | 4.26 |
733 | 752 | 5.563842 | CGTTCGAGAGTAACGTATTACCTT | 58.436 | 41.667 | 0.00 | 0.00 | 43.52 | 3.50 |
750 | 769 | 7.694388 | ATCGAATTTTAATCAGATCGTTCGA | 57.306 | 32.000 | 14.90 | 14.90 | 46.46 | 3.71 |
775 | 794 | 2.433491 | CCGTGGCCGTCGAATCAA | 60.433 | 61.111 | 19.30 | 0.00 | 0.00 | 2.57 |
799 | 818 | 1.201825 | GATAACGATGCGCGCTTCC | 59.798 | 57.895 | 32.96 | 20.83 | 46.04 | 3.46 |
803 | 822 | 1.199370 | GACTGATAACGATGCGCGC | 59.801 | 57.895 | 27.26 | 27.26 | 46.04 | 6.86 |
804 | 823 | 3.170552 | ATCTGACTGATAACGATGCGCG | 61.171 | 50.000 | 0.00 | 0.00 | 38.79 | 6.86 |
805 | 824 | 1.840181 | TCTGACTGATAACGATGCGC | 58.160 | 50.000 | 0.00 | 0.00 | 0.00 | 6.09 |
806 | 825 | 3.632189 | TCATCTGACTGATAACGATGCG | 58.368 | 45.455 | 0.00 | 0.00 | 33.36 | 4.73 |
807 | 826 | 6.201615 | TCAAATCATCTGACTGATAACGATGC | 59.798 | 38.462 | 0.00 | 0.00 | 34.79 | 3.91 |
808 | 827 | 7.704789 | TCAAATCATCTGACTGATAACGATG | 57.295 | 36.000 | 0.00 | 0.00 | 34.79 | 3.84 |
809 | 828 | 8.899427 | ATTCAAATCATCTGACTGATAACGAT | 57.101 | 30.769 | 0.00 | 0.00 | 34.79 | 3.73 |
898 | 918 | 5.757850 | ATTATGTTCGAGGGAAGCAAATC | 57.242 | 39.130 | 0.00 | 0.00 | 31.49 | 2.17 |
938 | 960 | 0.683504 | ATCTGGCGAGTAGAACCGGT | 60.684 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
1155 | 1185 | 0.897863 | TTCCACCTCCGCCATTTTGG | 60.898 | 55.000 | 0.00 | 0.00 | 41.55 | 3.28 |
1156 | 1186 | 0.527565 | CTTCCACCTCCGCCATTTTG | 59.472 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
1164 | 1194 | 1.213013 | CTGACGTCTTCCACCTCCG | 59.787 | 63.158 | 17.92 | 0.00 | 0.00 | 4.63 |
1174 | 1204 | 0.036952 | CCATCCTGTTGCTGACGTCT | 60.037 | 55.000 | 17.92 | 0.00 | 0.00 | 4.18 |
1261 | 1291 | 2.997897 | GAGTGGAGGTGGGACGCT | 60.998 | 66.667 | 0.00 | 0.00 | 39.78 | 5.07 |
1343 | 1382 | 4.436998 | GTGTGAGGAGGGGTCGCG | 62.437 | 72.222 | 0.00 | 0.00 | 0.00 | 5.87 |
1344 | 1383 | 4.436998 | CGTGTGAGGAGGGGTCGC | 62.437 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
1345 | 1384 | 2.005960 | GATCGTGTGAGGAGGGGTCG | 62.006 | 65.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1346 | 1385 | 1.817209 | GATCGTGTGAGGAGGGGTC | 59.183 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
1347 | 1386 | 2.052690 | CGATCGTGTGAGGAGGGGT | 61.053 | 63.158 | 7.03 | 0.00 | 0.00 | 4.95 |
1348 | 1387 | 2.786495 | CCGATCGTGTGAGGAGGGG | 61.786 | 68.421 | 15.09 | 0.00 | 0.00 | 4.79 |
1349 | 1388 | 1.605058 | AACCGATCGTGTGAGGAGGG | 61.605 | 60.000 | 15.09 | 0.00 | 0.00 | 4.30 |
1360 | 1400 | 1.154035 | GCCCAAGCAAAACCGATCG | 60.154 | 57.895 | 8.51 | 8.51 | 39.53 | 3.69 |
1516 | 1556 | 1.075600 | GAGAGAGAGGGGAGTGGGG | 60.076 | 68.421 | 0.00 | 0.00 | 0.00 | 4.96 |
1520 | 1560 | 1.409101 | GCGTAAGAGAGAGAGGGGAGT | 60.409 | 57.143 | 0.00 | 0.00 | 43.02 | 3.85 |
1529 | 1571 | 2.423892 | GTCAGATGTGGCGTAAGAGAGA | 59.576 | 50.000 | 0.00 | 0.00 | 43.02 | 3.10 |
1701 | 1749 | 1.000233 | CACAGGTAACGTGACGACCG | 61.000 | 60.000 | 13.70 | 8.82 | 41.53 | 4.79 |
1875 | 1923 | 3.521126 | CAGACTGCCCCTGCCTATATAAT | 59.479 | 47.826 | 0.00 | 0.00 | 36.33 | 1.28 |
2367 | 2564 | 4.154195 | ACATACGGAGCAAAATGAGTGAAC | 59.846 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
2435 | 2633 | 4.277258 | CATGCAAAAATGCTAGCTACTCG | 58.723 | 43.478 | 17.23 | 1.37 | 35.49 | 4.18 |
2473 | 2671 | 1.197721 | GGCAAACAGTGTCTGATTCGG | 59.802 | 52.381 | 0.00 | 0.00 | 35.18 | 4.30 |
2595 | 2797 | 9.285770 | GTAAATCAAATTATTTCCAGTCGAACC | 57.714 | 33.333 | 0.00 | 0.00 | 31.63 | 3.62 |
3120 | 3325 | 4.316722 | CGACGAGATATGCTTCTTTGAACG | 60.317 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
3276 | 3481 | 2.164219 | CCAGGCTGCAAATGTATTTCGT | 59.836 | 45.455 | 9.56 | 0.00 | 0.00 | 3.85 |
3316 | 3521 | 5.175673 | GGCACAAAAATCAGCTAAACAGAAC | 59.824 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3319 | 3524 | 4.619973 | TGGCACAAAAATCAGCTAAACAG | 58.380 | 39.130 | 0.00 | 0.00 | 31.92 | 3.16 |
3452 | 3657 | 8.918202 | TTTGACAGATTACAGAACAAAGGTAT | 57.082 | 30.769 | 0.00 | 0.00 | 0.00 | 2.73 |
3459 | 3664 | 7.042321 | CCGTAAGTTTTGACAGATTACAGAACA | 60.042 | 37.037 | 0.00 | 0.00 | 34.87 | 3.18 |
3494 | 3699 | 4.999311 | GCCAAGCCTGAATCAAAGAAAAAT | 59.001 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
3624 | 3861 | 9.487442 | TCAAAAGCCTACAAAGGGAAATATAAT | 57.513 | 29.630 | 0.00 | 0.00 | 43.87 | 1.28 |
3820 | 4057 | 5.982516 | TGTCAACCACAATTTTTGTAGATGC | 59.017 | 36.000 | 0.00 | 0.00 | 43.23 | 3.91 |
4116 | 4689 | 8.784043 | GCGGTTGTAGGAAAAGATATCAATATT | 58.216 | 33.333 | 5.32 | 0.00 | 0.00 | 1.28 |
4117 | 4690 | 7.936847 | TGCGGTTGTAGGAAAAGATATCAATAT | 59.063 | 33.333 | 5.32 | 0.00 | 0.00 | 1.28 |
4118 | 4691 | 7.276658 | TGCGGTTGTAGGAAAAGATATCAATA | 58.723 | 34.615 | 5.32 | 0.00 | 0.00 | 1.90 |
4119 | 4692 | 6.119536 | TGCGGTTGTAGGAAAAGATATCAAT | 58.880 | 36.000 | 5.32 | 0.00 | 0.00 | 2.57 |
4120 | 4693 | 5.492895 | TGCGGTTGTAGGAAAAGATATCAA | 58.507 | 37.500 | 5.32 | 0.00 | 0.00 | 2.57 |
4121 | 4694 | 5.092554 | TGCGGTTGTAGGAAAAGATATCA | 57.907 | 39.130 | 5.32 | 0.00 | 0.00 | 2.15 |
4122 | 4695 | 5.116882 | ACTGCGGTTGTAGGAAAAGATATC | 58.883 | 41.667 | 0.00 | 0.00 | 31.21 | 1.63 |
4123 | 4696 | 5.099042 | ACTGCGGTTGTAGGAAAAGATAT | 57.901 | 39.130 | 0.00 | 0.00 | 31.21 | 1.63 |
4124 | 4697 | 4.020928 | TGACTGCGGTTGTAGGAAAAGATA | 60.021 | 41.667 | 0.00 | 0.00 | 31.21 | 1.98 |
4125 | 4698 | 3.244422 | TGACTGCGGTTGTAGGAAAAGAT | 60.244 | 43.478 | 0.00 | 0.00 | 31.21 | 2.40 |
4126 | 4699 | 2.103432 | TGACTGCGGTTGTAGGAAAAGA | 59.897 | 45.455 | 0.00 | 0.00 | 31.21 | 2.52 |
4127 | 4700 | 2.489971 | TGACTGCGGTTGTAGGAAAAG | 58.510 | 47.619 | 0.00 | 0.00 | 31.21 | 2.27 |
4128 | 4701 | 2.623878 | TGACTGCGGTTGTAGGAAAA | 57.376 | 45.000 | 0.00 | 0.00 | 31.21 | 2.29 |
4129 | 4702 | 2.614983 | GTTTGACTGCGGTTGTAGGAAA | 59.385 | 45.455 | 0.00 | 0.00 | 31.21 | 3.13 |
4130 | 4703 | 2.158871 | AGTTTGACTGCGGTTGTAGGAA | 60.159 | 45.455 | 0.00 | 0.00 | 31.21 | 3.36 |
4131 | 4704 | 1.414919 | AGTTTGACTGCGGTTGTAGGA | 59.585 | 47.619 | 0.00 | 0.00 | 31.21 | 2.94 |
4132 | 4705 | 1.878953 | AGTTTGACTGCGGTTGTAGG | 58.121 | 50.000 | 0.00 | 0.00 | 31.21 | 3.18 |
4133 | 4706 | 3.963383 | AAAGTTTGACTGCGGTTGTAG | 57.037 | 42.857 | 0.00 | 0.00 | 0.00 | 2.74 |
4134 | 4707 | 4.444536 | AGTAAAGTTTGACTGCGGTTGTA | 58.555 | 39.130 | 0.00 | 0.00 | 0.00 | 2.41 |
4135 | 4708 | 3.275999 | AGTAAAGTTTGACTGCGGTTGT | 58.724 | 40.909 | 0.00 | 0.00 | 0.00 | 3.32 |
4136 | 4709 | 3.963383 | AGTAAAGTTTGACTGCGGTTG | 57.037 | 42.857 | 0.00 | 0.00 | 0.00 | 3.77 |
4137 | 4710 | 3.492011 | CGTAGTAAAGTTTGACTGCGGTT | 59.508 | 43.478 | 18.54 | 0.00 | 44.74 | 4.44 |
4138 | 4711 | 3.054878 | CGTAGTAAAGTTTGACTGCGGT | 58.945 | 45.455 | 18.54 | 0.00 | 44.74 | 5.68 |
4139 | 4712 | 3.700130 | CGTAGTAAAGTTTGACTGCGG | 57.300 | 47.619 | 18.54 | 0.00 | 44.74 | 5.69 |
4141 | 4714 | 6.847792 | GGTTAAACGTAGTAAAGTTTGACTGC | 59.152 | 38.462 | 18.28 | 1.64 | 45.00 | 4.40 |
4142 | 4715 | 8.134905 | AGGTTAAACGTAGTAAAGTTTGACTG | 57.865 | 34.615 | 18.28 | 0.00 | 45.00 | 3.51 |
4143 | 4716 | 9.816354 | TTAGGTTAAACGTAGTAAAGTTTGACT | 57.184 | 29.630 | 18.28 | 13.35 | 45.00 | 3.41 |
4147 | 4720 | 9.816354 | TGTCTTAGGTTAAACGTAGTAAAGTTT | 57.184 | 29.630 | 9.18 | 9.18 | 45.00 | 2.66 |
4148 | 4721 | 9.816354 | TTGTCTTAGGTTAAACGTAGTAAAGTT | 57.184 | 29.630 | 0.00 | 0.00 | 45.00 | 2.66 |
4149 | 4722 | 9.816354 | TTTGTCTTAGGTTAAACGTAGTAAAGT | 57.184 | 29.630 | 0.00 | 0.00 | 45.00 | 2.66 |
4163 | 4736 | 8.827677 | GTTCGCATATAAGATTTGTCTTAGGTT | 58.172 | 33.333 | 4.47 | 0.00 | 35.89 | 3.50 |
4164 | 4737 | 8.204836 | AGTTCGCATATAAGATTTGTCTTAGGT | 58.795 | 33.333 | 4.47 | 0.00 | 35.89 | 3.08 |
4165 | 4738 | 8.594881 | AGTTCGCATATAAGATTTGTCTTAGG | 57.405 | 34.615 | 4.47 | 0.00 | 35.89 | 2.69 |
4175 | 4748 | 9.916397 | CGTTTCTTTTTAGTTCGCATATAAGAT | 57.084 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
4176 | 4749 | 8.385111 | CCGTTTCTTTTTAGTTCGCATATAAGA | 58.615 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
4177 | 4750 | 8.385111 | TCCGTTTCTTTTTAGTTCGCATATAAG | 58.615 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
4206 | 4779 | 4.899502 | ACAGAGAAAACCTCCATGTACTG | 58.100 | 43.478 | 0.00 | 0.00 | 42.97 | 2.74 |
4207 | 4780 | 5.568620 | AACAGAGAAAACCTCCATGTACT | 57.431 | 39.130 | 0.00 | 0.00 | 42.97 | 2.73 |
4239 | 4812 | 4.556233 | TCCTAGACATCACAAAAGACACG | 58.444 | 43.478 | 0.00 | 0.00 | 0.00 | 4.49 |
4277 | 4851 | 7.456269 | TCAAGGGACCCACAAACATATATTTTT | 59.544 | 33.333 | 14.60 | 0.00 | 0.00 | 1.94 |
4282 | 4856 | 4.538490 | ACTCAAGGGACCCACAAACATATA | 59.462 | 41.667 | 14.60 | 0.00 | 0.00 | 0.86 |
4285 | 4859 | 1.499007 | ACTCAAGGGACCCACAAACAT | 59.501 | 47.619 | 14.60 | 0.00 | 0.00 | 2.71 |
4286 | 4860 | 0.923358 | ACTCAAGGGACCCACAAACA | 59.077 | 50.000 | 14.60 | 0.00 | 0.00 | 2.83 |
4287 | 4861 | 2.943036 | TACTCAAGGGACCCACAAAC | 57.057 | 50.000 | 14.60 | 0.00 | 0.00 | 2.93 |
4504 | 5078 | 1.129998 | CTTGCTCTGCCTTCAATGACG | 59.870 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
4848 | 5454 | 0.887836 | GCTTTTTCGGACGGAGGGTT | 60.888 | 55.000 | 0.00 | 0.00 | 0.00 | 4.11 |
4849 | 5455 | 1.302271 | GCTTTTTCGGACGGAGGGT | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 4.34 |
4850 | 5456 | 0.605589 | AAGCTTTTTCGGACGGAGGG | 60.606 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4851 | 5457 | 0.517316 | CAAGCTTTTTCGGACGGAGG | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4852 | 5458 | 0.110192 | GCAAGCTTTTTCGGACGGAG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4853 | 5459 | 1.512156 | GGCAAGCTTTTTCGGACGGA | 61.512 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4854 | 5460 | 1.081442 | GGCAAGCTTTTTCGGACGG | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 4.79 |
4855 | 5461 | 1.081442 | GGGCAAGCTTTTTCGGACG | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 4.79 |
4856 | 5462 | 1.179174 | AGGGGCAAGCTTTTTCGGAC | 61.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4857 | 5463 | 0.893727 | GAGGGGCAAGCTTTTTCGGA | 60.894 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
4858 | 5464 | 1.178534 | TGAGGGGCAAGCTTTTTCGG | 61.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4859 | 5465 | 0.673437 | TTGAGGGGCAAGCTTTTTCG | 59.327 | 50.000 | 0.00 | 0.00 | 31.55 | 3.46 |
4860 | 5466 | 2.908688 | TTTGAGGGGCAAGCTTTTTC | 57.091 | 45.000 | 0.00 | 0.00 | 37.87 | 2.29 |
4861 | 5467 | 2.224597 | CCATTTGAGGGGCAAGCTTTTT | 60.225 | 45.455 | 0.00 | 0.00 | 37.87 | 1.94 |
4862 | 5468 | 1.348696 | CCATTTGAGGGGCAAGCTTTT | 59.651 | 47.619 | 0.00 | 0.00 | 37.87 | 2.27 |
4863 | 5469 | 0.978907 | CCATTTGAGGGGCAAGCTTT | 59.021 | 50.000 | 0.00 | 0.00 | 37.87 | 3.51 |
4864 | 5470 | 0.114954 | TCCATTTGAGGGGCAAGCTT | 59.885 | 50.000 | 0.00 | 0.00 | 37.87 | 3.74 |
4865 | 5471 | 0.337428 | ATCCATTTGAGGGGCAAGCT | 59.663 | 50.000 | 0.00 | 0.00 | 37.87 | 3.74 |
4866 | 5472 | 0.462789 | CATCCATTTGAGGGGCAAGC | 59.537 | 55.000 | 0.00 | 0.00 | 37.87 | 4.01 |
4867 | 5473 | 1.856629 | ACATCCATTTGAGGGGCAAG | 58.143 | 50.000 | 0.00 | 0.00 | 37.87 | 4.01 |
4868 | 5474 | 2.622977 | GGTACATCCATTTGAGGGGCAA | 60.623 | 50.000 | 0.00 | 0.00 | 35.97 | 4.52 |
4869 | 5475 | 1.064017 | GGTACATCCATTTGAGGGGCA | 60.064 | 52.381 | 0.00 | 0.00 | 35.97 | 5.36 |
4870 | 5476 | 1.215423 | AGGTACATCCATTTGAGGGGC | 59.785 | 52.381 | 0.00 | 0.00 | 39.02 | 5.80 |
4871 | 5477 | 3.669939 | AAGGTACATCCATTTGAGGGG | 57.330 | 47.619 | 0.00 | 0.00 | 39.02 | 4.79 |
4872 | 5478 | 4.137543 | GCTAAGGTACATCCATTTGAGGG | 58.862 | 47.826 | 0.00 | 0.00 | 39.02 | 4.30 |
4873 | 5479 | 4.780815 | TGCTAAGGTACATCCATTTGAGG | 58.219 | 43.478 | 0.00 | 0.00 | 39.02 | 3.86 |
4874 | 5480 | 6.949352 | ATTGCTAAGGTACATCCATTTGAG | 57.051 | 37.500 | 0.00 | 0.00 | 39.02 | 3.02 |
4875 | 5481 | 7.395772 | TCAAATTGCTAAGGTACATCCATTTGA | 59.604 | 33.333 | 0.00 | 0.00 | 38.06 | 2.69 |
4876 | 5482 | 7.546358 | TCAAATTGCTAAGGTACATCCATTTG | 58.454 | 34.615 | 0.00 | 0.00 | 39.02 | 2.32 |
4877 | 5483 | 7.147846 | CCTCAAATTGCTAAGGTACATCCATTT | 60.148 | 37.037 | 0.00 | 0.00 | 39.02 | 2.32 |
4878 | 5484 | 6.322201 | CCTCAAATTGCTAAGGTACATCCATT | 59.678 | 38.462 | 0.00 | 0.00 | 39.02 | 3.16 |
4879 | 5485 | 5.829924 | CCTCAAATTGCTAAGGTACATCCAT | 59.170 | 40.000 | 0.00 | 0.00 | 39.02 | 3.41 |
4880 | 5486 | 5.192927 | CCTCAAATTGCTAAGGTACATCCA | 58.807 | 41.667 | 0.00 | 0.00 | 39.02 | 3.41 |
4881 | 5487 | 4.580580 | CCCTCAAATTGCTAAGGTACATCC | 59.419 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
4882 | 5488 | 5.297029 | GTCCCTCAAATTGCTAAGGTACATC | 59.703 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
4883 | 5489 | 5.193679 | GTCCCTCAAATTGCTAAGGTACAT | 58.806 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
4884 | 5490 | 4.042311 | TGTCCCTCAAATTGCTAAGGTACA | 59.958 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
4885 | 5491 | 4.585879 | TGTCCCTCAAATTGCTAAGGTAC | 58.414 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
4886 | 5492 | 4.919774 | TGTCCCTCAAATTGCTAAGGTA | 57.080 | 40.909 | 0.00 | 0.00 | 0.00 | 3.08 |
4887 | 5493 | 3.806949 | TGTCCCTCAAATTGCTAAGGT | 57.193 | 42.857 | 0.00 | 0.00 | 0.00 | 3.50 |
4888 | 5494 | 3.119352 | GCTTGTCCCTCAAATTGCTAAGG | 60.119 | 47.826 | 0.00 | 0.00 | 35.48 | 2.69 |
4889 | 5495 | 3.760684 | AGCTTGTCCCTCAAATTGCTAAG | 59.239 | 43.478 | 0.00 | 0.00 | 34.71 | 2.18 |
4890 | 5496 | 3.766545 | AGCTTGTCCCTCAAATTGCTAA | 58.233 | 40.909 | 0.00 | 0.00 | 34.71 | 3.09 |
4891 | 5497 | 3.439857 | AGCTTGTCCCTCAAATTGCTA | 57.560 | 42.857 | 0.00 | 0.00 | 34.71 | 3.49 |
4892 | 5498 | 2.299326 | AGCTTGTCCCTCAAATTGCT | 57.701 | 45.000 | 0.00 | 0.00 | 35.48 | 3.91 |
4893 | 5499 | 3.391506 | AAAGCTTGTCCCTCAAATTGC | 57.608 | 42.857 | 0.00 | 0.00 | 35.48 | 3.56 |
4894 | 5500 | 4.445385 | CGAAAAAGCTTGTCCCTCAAATTG | 59.555 | 41.667 | 0.00 | 0.00 | 35.48 | 2.32 |
4895 | 5501 | 4.501400 | CCGAAAAAGCTTGTCCCTCAAATT | 60.501 | 41.667 | 0.00 | 0.00 | 35.48 | 1.82 |
4896 | 5502 | 3.005791 | CCGAAAAAGCTTGTCCCTCAAAT | 59.994 | 43.478 | 0.00 | 0.00 | 35.48 | 2.32 |
4897 | 5503 | 2.360801 | CCGAAAAAGCTTGTCCCTCAAA | 59.639 | 45.455 | 0.00 | 0.00 | 35.48 | 2.69 |
4898 | 5504 | 1.953686 | CCGAAAAAGCTTGTCCCTCAA | 59.046 | 47.619 | 0.00 | 0.00 | 34.61 | 3.02 |
4899 | 5505 | 1.142060 | TCCGAAAAAGCTTGTCCCTCA | 59.858 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
4900 | 5506 | 1.535896 | GTCCGAAAAAGCTTGTCCCTC | 59.464 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
4901 | 5507 | 1.133915 | TGTCCGAAAAAGCTTGTCCCT | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
4911 | 5517 | 3.236896 | ACTACTCCCTCTGTCCGAAAAA | 58.763 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
4921 | 5527 | 6.497259 | TGACAGAATAACAAACTACTCCCTCT | 59.503 | 38.462 | 0.00 | 0.00 | 0.00 | 3.69 |
4987 | 5594 | 8.473219 | GGAGATTTTGCTAATTCCTCTCAATTT | 58.527 | 33.333 | 0.00 | 0.00 | 31.47 | 1.82 |
4997 | 5604 | 6.924111 | TCACCAAAGGAGATTTTGCTAATTC | 58.076 | 36.000 | 0.00 | 0.00 | 36.86 | 2.17 |
5016 | 5623 | 7.227873 | TCAATTAATTAGTGTGTCCTTCACCA | 58.772 | 34.615 | 0.00 | 0.00 | 45.61 | 4.17 |
5025 | 5632 | 9.920946 | ACCCATTATCTCAATTAATTAGTGTGT | 57.079 | 29.630 | 0.00 | 0.00 | 0.00 | 3.72 |
5065 | 5672 | 5.869649 | TGCATAAACTACAGCCTCATCTA | 57.130 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
5075 | 5682 | 5.141182 | TGGACCCTTTTTGCATAAACTACA | 58.859 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
5132 | 5742 | 4.941263 | CCATTTCTCCGACAAGTATTTCCA | 59.059 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
5184 | 5794 | 8.746052 | AAATATTTGTCGGAGAAATGGATGTA | 57.254 | 30.769 | 19.84 | 2.88 | 39.69 | 2.29 |
5214 | 5824 | 4.886496 | ACCTAACAAGTACTCCCTTCAC | 57.114 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
5237 | 5847 | 4.041198 | CCAGGGAAACTGTCTAGTGGTTTA | 59.959 | 45.833 | 9.21 | 0.00 | 46.06 | 2.01 |
5440 | 6050 | 3.761218 | TCATTTTCATTTCCGCTAAGCCA | 59.239 | 39.130 | 0.00 | 0.00 | 0.00 | 4.75 |
5449 | 6059 | 5.526111 | CCATTGCTCCATCATTTTCATTTCC | 59.474 | 40.000 | 0.00 | 0.00 | 0.00 | 3.13 |
5482 | 6092 | 3.626670 | CCTCTTGAATCATCTTGGCAGTC | 59.373 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
5532 | 6142 | 0.739813 | GTCGTCCTGCGCCAAACTAT | 60.740 | 55.000 | 4.18 | 0.00 | 41.07 | 2.12 |
5667 | 6277 | 3.557595 | GCTACATGTGGTATCTTCAGCAC | 59.442 | 47.826 | 9.11 | 0.00 | 45.10 | 4.40 |
5726 | 6338 | 1.166531 | ACTCTTGCAAACGTGAGGGC | 61.167 | 55.000 | 15.48 | 0.00 | 0.00 | 5.19 |
5768 | 6380 | 1.002576 | TGCACTCGCACAACATTTCTG | 60.003 | 47.619 | 0.00 | 0.00 | 45.36 | 3.02 |
6223 | 6835 | 6.302269 | AGAGATATGGATGGCACCTAAAAAG | 58.698 | 40.000 | 0.00 | 0.00 | 0.00 | 2.27 |
6228 | 6840 | 6.263754 | TCAATAGAGATATGGATGGCACCTA | 58.736 | 40.000 | 0.00 | 0.00 | 0.00 | 3.08 |
6261 | 6873 | 7.012989 | TCAGAATTAGTTGATTCATGATGGCAG | 59.987 | 37.037 | 0.00 | 0.00 | 38.27 | 4.85 |
6264 | 6876 | 9.286170 | AGATCAGAATTAGTTGATTCATGATGG | 57.714 | 33.333 | 0.00 | 0.00 | 38.27 | 3.51 |
6299 | 7075 | 7.345653 | ACAACTTCAGAGGATATAGATTGGTGA | 59.654 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
6335 | 7111 | 0.753262 | GGCAAGGAGGAGCGATAAGA | 59.247 | 55.000 | 0.00 | 0.00 | 0.00 | 2.10 |
6341 | 7117 | 1.078214 | TTGATGGCAAGGAGGAGCG | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 5.03 |
6371 | 7147 | 2.225382 | TAGGAAGACCGACATGACCA | 57.775 | 50.000 | 0.00 | 0.00 | 41.83 | 4.02 |
6518 | 7298 | 4.511246 | CACCCGGATGGCTGGCAT | 62.511 | 66.667 | 17.28 | 17.28 | 39.39 | 4.40 |
6565 | 7345 | 8.579850 | TTTTTAGCAACACTTCCATCATAGAT | 57.420 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
6599 | 7379 | 8.551440 | CCCCTATGATTGATAACTTCCATCATA | 58.449 | 37.037 | 8.31 | 8.31 | 42.47 | 2.15 |
6600 | 7380 | 7.240405 | TCCCCTATGATTGATAACTTCCATCAT | 59.760 | 37.037 | 7.17 | 7.17 | 44.88 | 2.45 |
6601 | 7381 | 6.562223 | TCCCCTATGATTGATAACTTCCATCA | 59.438 | 38.462 | 0.00 | 0.00 | 39.90 | 3.07 |
6605 | 7385 | 5.249420 | GCTCCCCTATGATTGATAACTTCC | 58.751 | 45.833 | 0.00 | 0.00 | 0.00 | 3.46 |
6606 | 7386 | 4.932200 | CGCTCCCCTATGATTGATAACTTC | 59.068 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
6615 | 7395 | 4.103153 | TCTTTCATTCGCTCCCCTATGATT | 59.897 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
6628 | 7408 | 9.999883 | GAAGAAAATGTCAAAATCTTTCATTCG | 57.000 | 29.630 | 0.00 | 0.00 | 30.89 | 3.34 |
6692 | 7472 | 7.014230 | GGAGATGCTCTACTCTGAAGTTATTCT | 59.986 | 40.741 | 0.00 | 0.00 | 36.92 | 2.40 |
6711 | 7491 | 1.068250 | GGGACGTAGCTGGAGATGC | 59.932 | 63.158 | 0.00 | 0.00 | 0.00 | 3.91 |
6712 | 7492 | 1.043116 | TGGGGACGTAGCTGGAGATG | 61.043 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
6713 | 7493 | 0.325296 | TTGGGGACGTAGCTGGAGAT | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 |
6714 | 7494 | 1.077805 | TTGGGGACGTAGCTGGAGA | 59.922 | 57.895 | 0.00 | 0.00 | 0.00 | 3.71 |
6715 | 7495 | 1.218316 | GTTGGGGACGTAGCTGGAG | 59.782 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
6716 | 7496 | 1.534476 | TGTTGGGGACGTAGCTGGA | 60.534 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
6717 | 7497 | 1.079127 | CTGTTGGGGACGTAGCTGG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
6718 | 7498 | 1.079127 | CCTGTTGGGGACGTAGCTG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.24 |
6719 | 7499 | 2.955881 | GCCTGTTGGGGACGTAGCT | 61.956 | 63.158 | 0.00 | 0.00 | 35.12 | 3.32 |
6720 | 7500 | 2.436115 | GCCTGTTGGGGACGTAGC | 60.436 | 66.667 | 0.00 | 0.00 | 35.12 | 3.58 |
6721 | 7501 | 2.267961 | GGCCTGTTGGGGACGTAG | 59.732 | 66.667 | 0.00 | 0.00 | 35.12 | 3.51 |
6722 | 7502 | 3.324108 | GGGCCTGTTGGGGACGTA | 61.324 | 66.667 | 0.84 | 0.00 | 34.56 | 3.57 |
6724 | 7504 | 4.410400 | GAGGGCCTGTTGGGGACG | 62.410 | 72.222 | 12.95 | 0.00 | 34.56 | 4.79 |
6725 | 7505 | 4.048470 | GGAGGGCCTGTTGGGGAC | 62.048 | 72.222 | 12.95 | 0.00 | 35.12 | 4.46 |
6726 | 7506 | 4.608514 | TGGAGGGCCTGTTGGGGA | 62.609 | 66.667 | 12.95 | 0.00 | 35.12 | 4.81 |
6727 | 7507 | 3.589542 | TTGGAGGGCCTGTTGGGG | 61.590 | 66.667 | 12.95 | 0.00 | 35.12 | 4.96 |
6728 | 7508 | 2.036256 | CTTGGAGGGCCTGTTGGG | 59.964 | 66.667 | 12.95 | 0.00 | 38.36 | 4.12 |
6729 | 7509 | 2.036256 | CCTTGGAGGGCCTGTTGG | 59.964 | 66.667 | 12.95 | 3.64 | 34.31 | 3.77 |
6730 | 7510 | 2.677875 | GCCTTGGAGGGCCTGTTG | 60.678 | 66.667 | 12.95 | 0.00 | 45.92 | 3.33 |
6737 | 7517 | 3.036431 | AAAAAGTCGCCTTGGAGGG | 57.964 | 52.632 | 0.00 | 0.00 | 35.37 | 4.30 |
6765 | 7545 | 2.746277 | CTGGGAGGGTTTTCGGCG | 60.746 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
6766 | 7546 | 1.674651 | GACTGGGAGGGTTTTCGGC | 60.675 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
6767 | 7547 | 1.375523 | CGACTGGGAGGGTTTTCGG | 60.376 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
6768 | 7548 | 2.033194 | GCGACTGGGAGGGTTTTCG | 61.033 | 63.158 | 0.00 | 0.00 | 0.00 | 3.46 |
6769 | 7549 | 2.033194 | CGCGACTGGGAGGGTTTTC | 61.033 | 63.158 | 0.00 | 0.00 | 0.00 | 2.29 |
6770 | 7550 | 2.032071 | CGCGACTGGGAGGGTTTT | 59.968 | 61.111 | 0.00 | 0.00 | 0.00 | 2.43 |
6771 | 7551 | 4.699522 | GCGCGACTGGGAGGGTTT | 62.700 | 66.667 | 12.10 | 0.00 | 0.00 | 3.27 |
6779 | 7559 | 3.376935 | ATCTTGAGGGCGCGACTGG | 62.377 | 63.158 | 13.91 | 0.00 | 0.00 | 4.00 |
6780 | 7560 | 2.169789 | CATCTTGAGGGCGCGACTG | 61.170 | 63.158 | 13.91 | 0.00 | 0.00 | 3.51 |
6781 | 7561 | 2.185350 | CATCTTGAGGGCGCGACT | 59.815 | 61.111 | 13.91 | 7.89 | 0.00 | 4.18 |
6782 | 7562 | 3.567797 | GCATCTTGAGGGCGCGAC | 61.568 | 66.667 | 12.10 | 6.99 | 0.00 | 5.19 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.