Multiple sequence alignment - TraesCS5A01G134100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G134100 chr5A 100.000 6333 0 0 1 6333 302310550 302304218 0.000000e+00 11695.0
1 TraesCS5A01G134100 chr5A 93.146 321 21 1 313 633 127519050 127519369 2.670000e-128 470.0
2 TraesCS5A01G134100 chr5A 92.857 294 21 0 343 636 553426753 553427046 1.630000e-115 427.0
3 TraesCS5A01G134100 chr5A 91.837 98 8 0 2022 2119 7109734 7109637 3.080000e-28 137.0
4 TraesCS5A01G134100 chr5D 93.134 4078 178 51 2247 6262 221588628 221592665 0.000000e+00 5886.0
5 TraesCS5A01G134100 chr5D 97.636 1396 29 2 641 2033 221587169 221588563 0.000000e+00 2392.0
6 TraesCS5A01G134100 chr5D 97.101 69 2 0 2114 2182 221588561 221588629 4.010000e-22 117.0
7 TraesCS5A01G134100 chr5D 90.741 54 1 1 264 313 221587114 221587167 1.140000e-07 69.4
8 TraesCS5A01G134100 chr5D 86.538 52 4 3 6282 6332 104096093 104096142 3.000000e-03 54.7
9 TraesCS5A01G134100 chr5B 94.623 1711 69 10 2327 4022 244118145 244119847 0.000000e+00 2628.0
10 TraesCS5A01G134100 chr5B 97.070 1263 23 4 778 2033 244116554 244117809 0.000000e+00 2115.0
11 TraesCS5A01G134100 chr5B 95.013 1183 37 10 4462 5623 244120082 244121263 0.000000e+00 1838.0
12 TraesCS5A01G134100 chr5B 95.035 282 11 3 2 281 490657513 490657233 2.100000e-119 440.0
13 TraesCS5A01G134100 chr5B 89.106 358 27 12 5915 6262 244121727 244122082 9.750000e-118 435.0
14 TraesCS5A01G134100 chr5B 98.585 212 3 0 2114 2325 244117807 244118018 5.990000e-100 375.0
15 TraesCS5A01G134100 chr5B 95.349 129 3 1 5694 5822 244121277 244121402 1.080000e-47 202.0
16 TraesCS5A01G134100 chr5B 89.189 111 6 6 2013 2119 13221660 13221552 3.980000e-27 134.0
17 TraesCS5A01G134100 chr5B 89.623 106 8 2 2023 2128 659412126 659412228 1.430000e-26 132.0
18 TraesCS5A01G134100 chr5B 100.000 30 0 0 4031 4060 244119880 244119851 8.870000e-04 56.5
19 TraesCS5A01G134100 chrUn 94.753 324 17 0 313 636 99715529 99715206 7.330000e-139 505.0
20 TraesCS5A01G134100 chr6D 93.519 324 21 0 313 636 254819956 254819633 3.430000e-132 483.0
21 TraesCS5A01G134100 chr2A 97.348 264 7 0 2 265 676579254 676579517 3.480000e-122 449.0
22 TraesCS5A01G134100 chr2A 94.662 281 13 2 2 281 765109701 765109422 9.750000e-118 435.0
23 TraesCS5A01G134100 chr2A 94.346 283 15 1 2 283 530045223 530045505 3.510000e-117 433.0
24 TraesCS5A01G134100 chr2A 83.108 296 45 3 344 636 2459737 2460030 1.350000e-66 265.0
25 TraesCS5A01G134100 chr2A 97.647 85 2 0 2032 2116 199665787 199665871 5.120000e-31 147.0
26 TraesCS5A01G134100 chr2A 94.565 92 4 1 2032 2123 408935238 408935328 2.380000e-29 141.0
27 TraesCS5A01G134100 chr4A 96.981 265 8 0 2 266 4515701 4515965 4.500000e-121 446.0
28 TraesCS5A01G134100 chr6A 96.629 267 9 0 2 268 501284288 501284554 1.620000e-120 444.0
29 TraesCS5A01G134100 chr6A 95.714 70 3 0 6264 6333 559202889 559202820 5.190000e-21 113.0
30 TraesCS5A01G134100 chr6A 86.885 61 6 2 6267 6326 15780363 15780422 4.100000e-07 67.6
31 TraesCS5A01G134100 chr1A 95.324 278 12 1 2 279 447440001 447439725 2.100000e-119 440.0
32 TraesCS5A01G134100 chr7D 94.718 284 12 2 2 282 509108541 509108824 7.540000e-119 438.0
33 TraesCS5A01G134100 chr7D 82.716 324 56 0 313 636 197344456 197344133 8.030000e-74 289.0
34 TraesCS5A01G134100 chr3A 95.000 280 13 1 2 280 612208202 612207923 7.540000e-119 438.0
35 TraesCS5A01G134100 chr3A 90.541 74 5 2 6262 6333 208266782 208266709 5.230000e-16 97.1
36 TraesCS5A01G134100 chr2D 83.618 293 42 4 344 636 565092273 565092559 2.910000e-68 270.0
37 TraesCS5A01G134100 chr2D 96.552 87 3 0 2032 2118 373220112 373220198 1.840000e-30 145.0
38 TraesCS5A01G134100 chr2B 81.602 337 53 7 314 648 791445584 791445255 2.910000e-68 270.0
39 TraesCS5A01G134100 chr2B 87.097 62 5 3 6260 6320 108641993 108642052 4.100000e-07 67.6
40 TraesCS5A01G134100 chr2B 86.667 60 5 3 6265 6324 475628486 475628430 5.300000e-06 63.9
41 TraesCS5A01G134100 chr7B 84.444 270 38 4 370 636 161660104 161659836 4.870000e-66 263.0
42 TraesCS5A01G134100 chr7B 95.455 88 4 0 2032 2119 235308704 235308617 2.380000e-29 141.0
43 TraesCS5A01G134100 chr7B 93.333 45 1 1 6282 6324 472782330 472782286 1.470000e-06 65.8
44 TraesCS5A01G134100 chr7B 86.538 52 4 3 6282 6333 580971017 580971065 3.000000e-03 54.7
45 TraesCS5A01G134100 chr3B 94.792 96 4 1 2032 2127 766989809 766989715 1.420000e-31 148.0
46 TraesCS5A01G134100 chr4B 94.505 91 5 0 2029 2119 496549868 496549958 2.380000e-29 141.0
47 TraesCS5A01G134100 chr4B 97.619 42 1 0 6284 6325 191095837 191095878 8.810000e-09 73.1
48 TraesCS5A01G134100 chr1D 91.667 72 3 2 6264 6333 298438661 298438591 5.230000e-16 97.1
49 TraesCS5A01G134100 chr4D 95.238 42 0 2 6282 6322 199021271 199021311 1.470000e-06 65.8
50 TraesCS5A01G134100 chr4D 96.970 33 0 1 6282 6313 310454880 310454912 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G134100 chr5A 302304218 302310550 6332 True 11695.0 11695 100.000000 1 6333 1 chr5A.!!$R2 6332
1 TraesCS5A01G134100 chr5D 221587114 221592665 5551 False 2116.1 5886 94.653000 264 6262 4 chr5D.!!$F2 5998
2 TraesCS5A01G134100 chr5B 244116554 244122082 5528 False 1265.5 2628 94.957667 778 6262 6 chr5B.!!$F2 5484

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
418 423 0.029300 CCAGACGCACAAAACCACAG 59.971 55.0 0.00 0.0 0.00 3.66 F
613 618 0.108567 TTCAGCACGCGCCTTATGTA 60.109 50.0 5.73 0.0 39.83 2.29 F
630 635 0.179134 GTAGCGCGTCTGTTGGAGAT 60.179 55.0 8.43 0.0 31.63 2.75 F
631 636 0.179137 TAGCGCGTCTGTTGGAGATG 60.179 55.0 8.43 0.0 40.33 2.90 F
2045 2060 0.466124 GCATGTACTCCCTCTGTCCC 59.534 60.0 0.00 0.0 0.00 4.46 F
2603 2843 0.459585 TGCAGCGGACGAACTATTCC 60.460 55.0 0.00 0.0 0.00 3.01 F
3641 3885 0.515127 TAACATTTGACGCCGCACAG 59.485 50.0 0.00 0.0 0.00 3.66 F
4238 4496 0.727398 GGTGGTCAATAAGTGCGAGC 59.273 55.0 0.00 0.0 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1878 1890 0.886490 CTCACCCCACTGACAACAGC 60.886 60.000 0.00 0.00 46.95 4.40 R
2192 2207 0.968405 GCAACCTTTCATGCAAGGGA 59.032 50.000 25.19 0.00 46.98 4.20 R
2193 2208 0.971386 AGCAACCTTTCATGCAAGGG 59.029 50.000 25.19 14.58 46.98 3.95 R
2603 2843 1.901591 ACAGCCAGGACAGATTGTTG 58.098 50.000 0.00 0.00 0.00 3.33 R
2967 3209 0.106268 TTGCCCAGTTGAGCAAGGAA 60.106 50.000 0.00 0.00 43.74 3.36 R
4200 4458 1.197721 CCAACAAGACATGAGTTCGCC 59.802 52.381 0.00 0.00 0.00 5.54 R
5092 5472 1.065418 AGGGCAGTTCCTAATCCAACG 60.065 52.381 0.00 0.00 34.92 4.10 R
5995 6631 1.006832 CTGGATAAACCGAGCAACCG 58.993 55.000 0.00 0.00 42.61 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.417754 AGTCATGTCAGTCACATCATTCT 57.582 39.130 0.00 0.00 44.60 2.40
23 24 5.417811 AGTCATGTCAGTCACATCATTCTC 58.582 41.667 0.00 0.00 44.60 2.87
24 25 4.569966 GTCATGTCAGTCACATCATTCTCC 59.430 45.833 0.00 0.00 44.60 3.71
25 26 4.468868 TCATGTCAGTCACATCATTCTCCT 59.531 41.667 0.00 0.00 44.60 3.69
26 27 5.658190 TCATGTCAGTCACATCATTCTCCTA 59.342 40.000 0.00 0.00 44.60 2.94
27 28 6.155049 TCATGTCAGTCACATCATTCTCCTAA 59.845 38.462 0.00 0.00 44.60 2.69
28 29 6.550938 TGTCAGTCACATCATTCTCCTAAT 57.449 37.500 0.00 0.00 0.00 1.73
29 30 7.660030 TGTCAGTCACATCATTCTCCTAATA 57.340 36.000 0.00 0.00 0.00 0.98
30 31 8.078060 TGTCAGTCACATCATTCTCCTAATAA 57.922 34.615 0.00 0.00 0.00 1.40
31 32 8.708378 TGTCAGTCACATCATTCTCCTAATAAT 58.292 33.333 0.00 0.00 0.00 1.28
32 33 8.986847 GTCAGTCACATCATTCTCCTAATAATG 58.013 37.037 0.00 0.00 34.96 1.90
33 34 8.708378 TCAGTCACATCATTCTCCTAATAATGT 58.292 33.333 0.00 0.00 35.16 2.71
34 35 8.771766 CAGTCACATCATTCTCCTAATAATGTG 58.228 37.037 7.42 7.42 42.27 3.21
35 36 8.708378 AGTCACATCATTCTCCTAATAATGTGA 58.292 33.333 11.06 11.06 45.37 3.58
37 38 9.716531 TCACATCATTCTCCTAATAATGTGATC 57.283 33.333 11.06 0.00 43.74 2.92
38 39 8.944029 CACATCATTCTCCTAATAATGTGATCC 58.056 37.037 7.85 0.00 43.10 3.36
39 40 8.105829 ACATCATTCTCCTAATAATGTGATCCC 58.894 37.037 0.00 0.00 35.16 3.85
40 41 6.701340 TCATTCTCCTAATAATGTGATCCCG 58.299 40.000 0.00 0.00 35.16 5.14
41 42 6.270000 TCATTCTCCTAATAATGTGATCCCGT 59.730 38.462 0.00 0.00 35.16 5.28
42 43 6.494666 TTCTCCTAATAATGTGATCCCGTT 57.505 37.500 0.00 0.00 0.00 4.44
43 44 7.606135 TTCTCCTAATAATGTGATCCCGTTA 57.394 36.000 0.00 0.00 0.00 3.18
44 45 7.606135 TCTCCTAATAATGTGATCCCGTTAA 57.394 36.000 0.00 0.00 0.00 2.01
45 46 8.202461 TCTCCTAATAATGTGATCCCGTTAAT 57.798 34.615 0.00 0.00 0.00 1.40
46 47 8.311836 TCTCCTAATAATGTGATCCCGTTAATC 58.688 37.037 0.00 0.00 0.00 1.75
47 48 7.969004 TCCTAATAATGTGATCCCGTTAATCA 58.031 34.615 0.00 0.00 0.00 2.57
48 49 8.433599 TCCTAATAATGTGATCCCGTTAATCAA 58.566 33.333 0.00 0.00 35.04 2.57
49 50 9.062524 CCTAATAATGTGATCCCGTTAATCAAA 57.937 33.333 0.00 0.00 35.04 2.69
52 53 8.690203 ATAATGTGATCCCGTTAATCAAATGA 57.310 30.769 0.00 0.00 32.55 2.57
53 54 5.811399 TGTGATCCCGTTAATCAAATGAC 57.189 39.130 0.00 0.00 35.04 3.06
54 55 5.249420 TGTGATCCCGTTAATCAAATGACA 58.751 37.500 0.00 0.00 35.04 3.58
55 56 5.707764 TGTGATCCCGTTAATCAAATGACAA 59.292 36.000 0.00 0.00 35.04 3.18
56 57 6.027749 GTGATCCCGTTAATCAAATGACAAC 58.972 40.000 0.00 0.00 35.04 3.32
57 58 5.943416 TGATCCCGTTAATCAAATGACAACT 59.057 36.000 0.00 0.00 30.37 3.16
58 59 7.065324 GTGATCCCGTTAATCAAATGACAACTA 59.935 37.037 0.00 0.00 35.04 2.24
59 60 7.608376 TGATCCCGTTAATCAAATGACAACTAA 59.392 33.333 0.00 0.00 30.37 2.24
60 61 7.931578 TCCCGTTAATCAAATGACAACTAAT 57.068 32.000 7.65 0.00 0.00 1.73
61 62 7.757526 TCCCGTTAATCAAATGACAACTAATG 58.242 34.615 7.65 0.00 0.00 1.90
77 78 8.788325 ACAACTAATGTCTATGGTTAGGAAAC 57.212 34.615 0.00 0.00 37.96 2.78
78 79 8.380099 ACAACTAATGTCTATGGTTAGGAAACA 58.620 33.333 0.00 0.00 37.96 2.83
79 80 9.396022 CAACTAATGTCTATGGTTAGGAAACAT 57.604 33.333 0.00 0.00 37.34 2.71
94 95 8.956426 GTTAGGAAACATAACCATCTTTGATCA 58.044 33.333 0.00 0.00 35.56 2.92
95 96 9.527157 TTAGGAAACATAACCATCTTTGATCAA 57.473 29.630 3.38 3.38 0.00 2.57
96 97 7.830739 AGGAAACATAACCATCTTTGATCAAC 58.169 34.615 7.89 0.00 0.00 3.18
97 98 6.747280 GGAAACATAACCATCTTTGATCAACG 59.253 38.462 7.89 6.62 0.00 4.10
98 99 7.361713 GGAAACATAACCATCTTTGATCAACGA 60.362 37.037 16.08 16.08 0.00 3.85
99 100 6.668541 ACATAACCATCTTTGATCAACGAG 57.331 37.500 18.24 10.23 0.00 4.18
100 101 5.065218 ACATAACCATCTTTGATCAACGAGC 59.935 40.000 18.24 0.00 0.00 5.03
101 102 3.340814 ACCATCTTTGATCAACGAGCT 57.659 42.857 18.24 2.03 0.00 4.09
102 103 4.471904 ACCATCTTTGATCAACGAGCTA 57.528 40.909 18.24 0.00 0.00 3.32
103 104 4.437239 ACCATCTTTGATCAACGAGCTAG 58.563 43.478 18.24 8.24 0.00 3.42
104 105 4.081420 ACCATCTTTGATCAACGAGCTAGT 60.081 41.667 18.24 10.56 0.00 2.57
105 106 4.872691 CCATCTTTGATCAACGAGCTAGTT 59.127 41.667 18.24 6.37 34.15 2.24
106 107 6.042777 CCATCTTTGATCAACGAGCTAGTTA 58.957 40.000 18.24 2.13 32.35 2.24
107 108 6.535150 CCATCTTTGATCAACGAGCTAGTTAA 59.465 38.462 18.24 0.00 32.35 2.01
108 109 7.254252 CCATCTTTGATCAACGAGCTAGTTAAG 60.254 40.741 18.24 11.45 32.35 1.85
109 110 6.688578 TCTTTGATCAACGAGCTAGTTAAGT 58.311 36.000 12.12 1.48 32.35 2.24
110 111 7.823665 TCTTTGATCAACGAGCTAGTTAAGTA 58.176 34.615 12.12 0.00 32.35 2.24
111 112 7.968956 TCTTTGATCAACGAGCTAGTTAAGTAG 59.031 37.037 12.12 12.29 32.35 2.57
112 113 6.997239 TGATCAACGAGCTAGTTAAGTAGA 57.003 37.500 19.55 5.60 32.35 2.59
113 114 7.017498 TGATCAACGAGCTAGTTAAGTAGAG 57.983 40.000 19.55 12.15 32.35 2.43
114 115 5.814764 TCAACGAGCTAGTTAAGTAGAGG 57.185 43.478 19.55 10.25 32.35 3.69
115 116 4.096081 TCAACGAGCTAGTTAAGTAGAGGC 59.904 45.833 19.55 6.71 32.35 4.70
116 117 3.618351 ACGAGCTAGTTAAGTAGAGGCA 58.382 45.455 19.55 0.00 0.00 4.75
117 118 4.208746 ACGAGCTAGTTAAGTAGAGGCAT 58.791 43.478 19.55 1.40 0.00 4.40
118 119 5.374921 ACGAGCTAGTTAAGTAGAGGCATA 58.625 41.667 19.55 0.00 0.00 3.14
119 120 5.239087 ACGAGCTAGTTAAGTAGAGGCATAC 59.761 44.000 19.55 1.94 0.00 2.39
120 121 5.470777 CGAGCTAGTTAAGTAGAGGCATACT 59.529 44.000 19.55 6.35 37.61 2.12
121 122 6.649973 CGAGCTAGTTAAGTAGAGGCATACTA 59.350 42.308 19.55 0.00 34.90 1.82
122 123 7.148540 CGAGCTAGTTAAGTAGAGGCATACTAG 60.149 44.444 19.55 0.00 34.90 2.57
123 124 7.519927 AGCTAGTTAAGTAGAGGCATACTAGT 58.480 38.462 19.55 0.00 37.18 2.57
124 125 7.446013 AGCTAGTTAAGTAGAGGCATACTAGTG 59.554 40.741 19.55 0.00 37.18 2.74
125 126 7.444792 GCTAGTTAAGTAGAGGCATACTAGTGA 59.555 40.741 19.55 0.00 37.18 3.41
126 127 7.571080 AGTTAAGTAGAGGCATACTAGTGAC 57.429 40.000 5.39 0.00 34.90 3.67
127 128 7.117397 AGTTAAGTAGAGGCATACTAGTGACA 58.883 38.462 5.39 0.00 34.90 3.58
128 129 5.838531 AAGTAGAGGCATACTAGTGACAC 57.161 43.478 5.39 0.00 34.90 3.67
129 130 5.118729 AGTAGAGGCATACTAGTGACACT 57.881 43.478 13.68 13.68 34.21 3.55
130 131 5.127491 AGTAGAGGCATACTAGTGACACTC 58.873 45.833 12.39 8.31 34.21 3.51
131 132 4.243793 AGAGGCATACTAGTGACACTCT 57.756 45.455 12.39 10.40 0.00 3.24
132 133 3.951037 AGAGGCATACTAGTGACACTCTG 59.049 47.826 12.39 9.04 33.23 3.35
133 134 3.697045 GAGGCATACTAGTGACACTCTGT 59.303 47.826 12.39 14.35 0.00 3.41
134 135 4.090090 AGGCATACTAGTGACACTCTGTT 58.910 43.478 12.39 0.00 0.00 3.16
135 136 4.528596 AGGCATACTAGTGACACTCTGTTT 59.471 41.667 12.39 5.23 0.00 2.83
136 137 4.627467 GGCATACTAGTGACACTCTGTTTG 59.373 45.833 12.39 16.63 0.00 2.93
137 138 5.230942 GCATACTAGTGACACTCTGTTTGT 58.769 41.667 12.39 5.61 0.00 2.83
138 139 5.346281 GCATACTAGTGACACTCTGTTTGTC 59.654 44.000 12.39 9.81 43.22 3.18
139 140 6.682746 CATACTAGTGACACTCTGTTTGTCT 58.317 40.000 12.39 0.00 43.30 3.41
140 141 7.575155 GCATACTAGTGACACTCTGTTTGTCTA 60.575 40.741 12.39 0.00 43.30 2.59
141 142 6.902771 ACTAGTGACACTCTGTTTGTCTAT 57.097 37.500 12.39 0.00 43.30 1.98
142 143 7.997773 ACTAGTGACACTCTGTTTGTCTATA 57.002 36.000 12.39 0.00 43.30 1.31
143 144 8.582657 ACTAGTGACACTCTGTTTGTCTATAT 57.417 34.615 12.39 0.00 43.30 0.86
144 145 9.682465 ACTAGTGACACTCTGTTTGTCTATATA 57.318 33.333 12.39 0.00 43.30 0.86
148 149 9.803315 GTGACACTCTGTTTGTCTATATATTCA 57.197 33.333 0.00 0.00 43.30 2.57
149 150 9.803315 TGACACTCTGTTTGTCTATATATTCAC 57.197 33.333 11.01 0.00 43.30 3.18
150 151 9.803315 GACACTCTGTTTGTCTATATATTCACA 57.197 33.333 0.00 0.00 40.30 3.58
151 152 9.587772 ACACTCTGTTTGTCTATATATTCACAC 57.412 33.333 0.00 0.00 0.00 3.82
152 153 9.586435 CACTCTGTTTGTCTATATATTCACACA 57.414 33.333 0.00 0.00 0.00 3.72
168 169 6.429791 TTCACACATGTATTATGTTTCCGG 57.570 37.500 0.00 0.00 0.00 5.14
169 170 5.492895 TCACACATGTATTATGTTTCCGGT 58.507 37.500 0.00 0.00 0.00 5.28
170 171 5.941058 TCACACATGTATTATGTTTCCGGTT 59.059 36.000 0.00 0.00 0.00 4.44
171 172 7.104290 TCACACATGTATTATGTTTCCGGTTA 58.896 34.615 0.00 0.00 0.00 2.85
172 173 7.606839 TCACACATGTATTATGTTTCCGGTTAA 59.393 33.333 0.00 0.00 0.00 2.01
173 174 8.402472 CACACATGTATTATGTTTCCGGTTAAT 58.598 33.333 0.00 1.95 0.00 1.40
174 175 9.616156 ACACATGTATTATGTTTCCGGTTAATA 57.384 29.630 0.00 0.00 0.00 0.98
184 185 8.828688 ATGTTTCCGGTTAATATAACTCTAGC 57.171 34.615 0.00 0.00 0.00 3.42
185 186 7.784037 TGTTTCCGGTTAATATAACTCTAGCA 58.216 34.615 0.00 0.00 0.00 3.49
186 187 8.426489 TGTTTCCGGTTAATATAACTCTAGCAT 58.574 33.333 0.00 0.00 0.00 3.79
187 188 8.709646 GTTTCCGGTTAATATAACTCTAGCATG 58.290 37.037 0.00 0.00 0.00 4.06
188 189 7.770366 TCCGGTTAATATAACTCTAGCATGA 57.230 36.000 0.00 0.00 0.00 3.07
189 190 8.185506 TCCGGTTAATATAACTCTAGCATGAA 57.814 34.615 0.00 0.00 0.00 2.57
190 191 8.812972 TCCGGTTAATATAACTCTAGCATGAAT 58.187 33.333 0.00 0.00 0.00 2.57
249 250 8.637196 AATAACTTTATTATTGCCTCTAGGGC 57.363 34.615 13.60 13.60 44.71 5.19
261 262 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02
262 263 5.310409 CCTCTAGGGCATATTTCCTTCAA 57.690 43.478 0.00 0.00 34.75 2.69
331 336 2.378028 GAGCATCTCCAACAGACGC 58.622 57.895 0.00 0.00 40.90 5.19
332 337 1.416813 GAGCATCTCCAACAGACGCG 61.417 60.000 3.53 3.53 45.48 6.01
333 338 2.456119 GCATCTCCAACAGACGCGG 61.456 63.158 12.47 0.00 28.87 6.46
334 339 1.811266 CATCTCCAACAGACGCGGG 60.811 63.158 12.47 0.00 32.26 6.13
335 340 3.665675 ATCTCCAACAGACGCGGGC 62.666 63.158 12.47 1.16 32.26 6.13
336 341 4.379243 CTCCAACAGACGCGGGCT 62.379 66.667 12.47 4.12 0.00 5.19
337 342 2.992689 TCCAACAGACGCGGGCTA 60.993 61.111 12.47 0.00 0.00 3.93
338 343 2.509336 CCAACAGACGCGGGCTAG 60.509 66.667 12.47 5.24 0.00 3.42
339 344 3.188786 CAACAGACGCGGGCTAGC 61.189 66.667 12.47 6.04 0.00 3.42
376 381 6.688637 AAAAGTATACAACCCCGAAATAGC 57.311 37.500 5.50 0.00 0.00 2.97
377 382 3.986277 AGTATACAACCCCGAAATAGCG 58.014 45.455 5.50 0.00 0.00 4.26
378 383 1.589803 ATACAACCCCGAAATAGCGC 58.410 50.000 0.00 0.00 0.00 5.92
379 384 0.538118 TACAACCCCGAAATAGCGCT 59.462 50.000 17.26 17.26 0.00 5.92
380 385 0.322187 ACAACCCCGAAATAGCGCTT 60.322 50.000 18.68 0.00 0.00 4.68
381 386 0.808755 CAACCCCGAAATAGCGCTTT 59.191 50.000 18.68 4.25 0.00 3.51
382 387 1.201414 CAACCCCGAAATAGCGCTTTT 59.799 47.619 18.68 12.24 0.00 2.27
383 388 0.808755 ACCCCGAAATAGCGCTTTTG 59.191 50.000 18.68 8.86 0.00 2.44
384 389 0.525455 CCCCGAAATAGCGCTTTTGC 60.525 55.000 18.68 12.58 43.23 3.68
398 403 4.683721 TTGCGCGCGGGAGGTTTA 62.684 61.111 33.06 1.38 0.00 2.01
401 406 4.745751 CGCGCGGGAGGTTTACCA 62.746 66.667 24.84 0.00 38.89 3.25
402 407 2.818274 GCGCGGGAGGTTTACCAG 60.818 66.667 8.83 0.00 38.89 4.00
403 408 2.975536 CGCGGGAGGTTTACCAGA 59.024 61.111 0.00 0.00 38.89 3.86
404 409 1.447314 CGCGGGAGGTTTACCAGAC 60.447 63.158 0.00 0.00 38.89 3.51
405 410 1.447314 GCGGGAGGTTTACCAGACG 60.447 63.158 1.13 3.60 38.89 4.18
406 411 1.447314 CGGGAGGTTTACCAGACGC 60.447 63.158 1.13 0.74 38.89 5.19
407 412 1.675219 GGGAGGTTTACCAGACGCA 59.325 57.895 1.13 0.00 38.89 5.24
408 413 0.672711 GGGAGGTTTACCAGACGCAC 60.673 60.000 1.13 0.00 38.89 5.34
409 414 0.034337 GGAGGTTTACCAGACGCACA 59.966 55.000 1.13 0.00 38.89 4.57
410 415 1.541670 GGAGGTTTACCAGACGCACAA 60.542 52.381 1.13 0.00 38.89 3.33
411 416 2.215196 GAGGTTTACCAGACGCACAAA 58.785 47.619 1.13 0.00 38.89 2.83
412 417 2.614983 GAGGTTTACCAGACGCACAAAA 59.385 45.455 1.13 0.00 38.89 2.44
413 418 2.356695 AGGTTTACCAGACGCACAAAAC 59.643 45.455 1.13 0.00 38.89 2.43
414 419 2.542205 GGTTTACCAGACGCACAAAACC 60.542 50.000 0.00 0.00 39.13 3.27
415 420 2.039818 TTACCAGACGCACAAAACCA 57.960 45.000 0.00 0.00 0.00 3.67
416 421 1.301423 TACCAGACGCACAAAACCAC 58.699 50.000 0.00 0.00 0.00 4.16
417 422 0.678366 ACCAGACGCACAAAACCACA 60.678 50.000 0.00 0.00 0.00 4.17
418 423 0.029300 CCAGACGCACAAAACCACAG 59.971 55.000 0.00 0.00 0.00 3.66
419 424 0.592247 CAGACGCACAAAACCACAGC 60.592 55.000 0.00 0.00 0.00 4.40
421 426 3.024043 CGCACAAAACCACAGCGC 61.024 61.111 0.00 0.00 41.95 5.92
422 427 2.658268 GCACAAAACCACAGCGCC 60.658 61.111 2.29 0.00 0.00 6.53
423 428 2.027460 CACAAAACCACAGCGCCC 59.973 61.111 2.29 0.00 0.00 6.13
424 429 2.441164 ACAAAACCACAGCGCCCA 60.441 55.556 2.29 0.00 0.00 5.36
425 430 2.055042 ACAAAACCACAGCGCCCAA 61.055 52.632 2.29 0.00 0.00 4.12
426 431 1.591327 CAAAACCACAGCGCCCAAC 60.591 57.895 2.29 0.00 0.00 3.77
427 432 2.791868 AAAACCACAGCGCCCAACC 61.792 57.895 2.29 0.00 0.00 3.77
428 433 3.731766 AAACCACAGCGCCCAACCT 62.732 57.895 2.29 0.00 0.00 3.50
429 434 4.954970 ACCACAGCGCCCAACCTG 62.955 66.667 2.29 0.00 35.26 4.00
440 445 4.263572 CAACCTGGCGGACCCACA 62.264 66.667 0.00 0.00 39.18 4.17
441 446 4.265056 AACCTGGCGGACCCACAC 62.265 66.667 0.00 0.00 39.18 3.82
480 485 3.690280 CCGGCGCCCCAAATTTGT 61.690 61.111 23.46 0.00 0.00 2.83
481 486 2.344203 CCGGCGCCCCAAATTTGTA 61.344 57.895 23.46 0.00 0.00 2.41
482 487 1.138671 CGGCGCCCCAAATTTGTAG 59.861 57.895 23.46 8.62 0.00 2.74
483 488 1.153647 GGCGCCCCAAATTTGTAGC 60.154 57.895 18.11 16.31 0.00 3.58
484 489 1.604147 GGCGCCCCAAATTTGTAGCT 61.604 55.000 18.11 0.00 0.00 3.32
485 490 1.099689 GCGCCCCAAATTTGTAGCTA 58.900 50.000 20.82 0.00 0.00 3.32
486 491 1.202256 GCGCCCCAAATTTGTAGCTAC 60.202 52.381 17.30 17.30 0.00 3.58
487 492 1.063469 CGCCCCAAATTTGTAGCTACG 59.937 52.381 18.74 11.37 0.00 3.51
488 493 1.202256 GCCCCAAATTTGTAGCTACGC 60.202 52.381 18.74 8.86 0.00 4.42
489 494 2.365582 CCCCAAATTTGTAGCTACGCT 58.634 47.619 18.74 3.28 43.41 5.07
490 495 2.097466 CCCCAAATTTGTAGCTACGCTG 59.903 50.000 18.74 10.52 40.10 5.18
491 496 2.477863 CCCAAATTTGTAGCTACGCTGC 60.478 50.000 18.74 0.00 40.10 5.25
492 497 2.477863 CCAAATTTGTAGCTACGCTGCC 60.478 50.000 18.74 0.00 40.45 4.85
493 498 1.379527 AATTTGTAGCTACGCTGCCC 58.620 50.000 18.74 0.00 40.45 5.36
494 499 0.810031 ATTTGTAGCTACGCTGCCCG 60.810 55.000 18.74 0.00 40.45 6.13
495 500 4.508128 TGTAGCTACGCTGCCCGC 62.508 66.667 18.74 0.00 40.45 6.13
505 510 3.047280 CTGCCCGCGTGCACTAAA 61.047 61.111 13.54 0.00 36.04 1.85
506 511 2.359354 TGCCCGCGTGCACTAAAT 60.359 55.556 13.54 0.00 36.04 1.40
507 512 1.922135 CTGCCCGCGTGCACTAAATT 61.922 55.000 13.54 0.00 36.04 1.82
508 513 1.211709 GCCCGCGTGCACTAAATTT 59.788 52.632 16.19 0.00 0.00 1.82
509 514 1.070471 GCCCGCGTGCACTAAATTTG 61.070 55.000 16.19 0.00 0.00 2.32
510 515 1.070471 CCCGCGTGCACTAAATTTGC 61.070 55.000 16.19 7.92 40.63 3.68
517 522 2.932498 TGCACTAAATTTGCAGCTTCG 58.068 42.857 0.00 0.00 45.06 3.79
518 523 2.293122 TGCACTAAATTTGCAGCTTCGT 59.707 40.909 0.00 0.00 45.06 3.85
519 524 3.243367 TGCACTAAATTTGCAGCTTCGTT 60.243 39.130 0.00 0.00 45.06 3.85
520 525 3.735746 GCACTAAATTTGCAGCTTCGTTT 59.264 39.130 0.00 0.00 39.93 3.60
521 526 4.209080 GCACTAAATTTGCAGCTTCGTTTT 59.791 37.500 0.00 0.00 39.93 2.43
522 527 5.276820 GCACTAAATTTGCAGCTTCGTTTTT 60.277 36.000 0.00 0.00 39.93 1.94
523 528 6.122125 CACTAAATTTGCAGCTTCGTTTTTG 58.878 36.000 0.00 0.00 0.00 2.44
524 529 5.810074 ACTAAATTTGCAGCTTCGTTTTTGT 59.190 32.000 0.00 0.00 0.00 2.83
525 530 4.519191 AATTTGCAGCTTCGTTTTTGTG 57.481 36.364 0.00 0.00 0.00 3.33
526 531 1.276415 TTGCAGCTTCGTTTTTGTGC 58.724 45.000 0.00 0.00 0.00 4.57
527 532 0.865218 TGCAGCTTCGTTTTTGTGCG 60.865 50.000 0.00 0.00 33.52 5.34
528 533 0.865639 GCAGCTTCGTTTTTGTGCGT 60.866 50.000 0.00 0.00 0.00 5.24
529 534 0.839477 CAGCTTCGTTTTTGTGCGTG 59.161 50.000 0.00 0.00 0.00 5.34
530 535 0.865639 AGCTTCGTTTTTGTGCGTGC 60.866 50.000 0.00 0.00 0.00 5.34
531 536 0.865639 GCTTCGTTTTTGTGCGTGCT 60.866 50.000 0.00 0.00 0.00 4.40
532 537 1.544686 CTTCGTTTTTGTGCGTGCTT 58.455 45.000 0.00 0.00 0.00 3.91
533 538 1.917303 CTTCGTTTTTGTGCGTGCTTT 59.083 42.857 0.00 0.00 0.00 3.51
534 539 2.826979 TCGTTTTTGTGCGTGCTTTA 57.173 40.000 0.00 0.00 0.00 1.85
535 540 3.341857 TCGTTTTTGTGCGTGCTTTAT 57.658 38.095 0.00 0.00 0.00 1.40
536 541 3.696898 TCGTTTTTGTGCGTGCTTTATT 58.303 36.364 0.00 0.00 0.00 1.40
537 542 4.106197 TCGTTTTTGTGCGTGCTTTATTT 58.894 34.783 0.00 0.00 0.00 1.40
538 543 4.563184 TCGTTTTTGTGCGTGCTTTATTTT 59.437 33.333 0.00 0.00 0.00 1.82
539 544 5.742453 TCGTTTTTGTGCGTGCTTTATTTTA 59.258 32.000 0.00 0.00 0.00 1.52
540 545 5.831601 CGTTTTTGTGCGTGCTTTATTTTAC 59.168 36.000 0.00 0.00 0.00 2.01
541 546 6.506513 CGTTTTTGTGCGTGCTTTATTTTACA 60.507 34.615 0.00 0.00 0.00 2.41
542 547 6.503616 TTTTGTGCGTGCTTTATTTTACAG 57.496 33.333 0.00 0.00 0.00 2.74
543 548 3.560503 TGTGCGTGCTTTATTTTACAGC 58.439 40.909 0.00 0.00 0.00 4.40
544 549 3.252215 TGTGCGTGCTTTATTTTACAGCT 59.748 39.130 0.00 0.00 34.42 4.24
545 550 4.226761 GTGCGTGCTTTATTTTACAGCTT 58.773 39.130 0.00 0.00 34.42 3.74
546 551 4.320953 GTGCGTGCTTTATTTTACAGCTTC 59.679 41.667 0.00 0.00 34.42 3.86
547 552 4.215399 TGCGTGCTTTATTTTACAGCTTCT 59.785 37.500 0.00 0.00 34.42 2.85
548 553 4.554973 GCGTGCTTTATTTTACAGCTTCTG 59.445 41.667 0.00 0.00 37.52 3.02
549 554 4.554973 CGTGCTTTATTTTACAGCTTCTGC 59.445 41.667 0.00 0.00 34.37 4.26
568 573 8.097514 CTTCTGCTGAAGCGTTATTTTTAATC 57.902 34.615 18.83 0.00 45.83 1.75
569 574 7.139896 TCTGCTGAAGCGTTATTTTTAATCA 57.860 32.000 0.00 0.00 45.83 2.57
570 575 7.021196 TCTGCTGAAGCGTTATTTTTAATCAC 58.979 34.615 0.00 0.00 45.83 3.06
571 576 5.792962 TGCTGAAGCGTTATTTTTAATCACG 59.207 36.000 0.00 2.67 45.83 4.35
576 581 4.382269 CGTTATTTTTAATCACGCACGC 57.618 40.909 0.00 0.00 0.00 5.34
577 582 3.063667 CGTTATTTTTAATCACGCACGCG 60.064 43.478 10.36 10.36 46.03 6.01
578 583 1.255767 ATTTTTAATCACGCACGCGC 58.744 45.000 12.02 0.00 44.19 6.86
579 584 0.236187 TTTTTAATCACGCACGCGCT 59.764 45.000 12.02 0.00 44.19 5.92
580 585 1.069255 TTTTAATCACGCACGCGCTA 58.931 45.000 12.02 0.00 44.19 4.26
581 586 1.282817 TTTAATCACGCACGCGCTAT 58.717 45.000 12.02 2.17 44.19 2.97
582 587 2.122563 TTAATCACGCACGCGCTATA 57.877 45.000 12.02 0.00 44.19 1.31
583 588 2.341318 TAATCACGCACGCGCTATAT 57.659 45.000 12.02 0.00 44.19 0.86
584 589 2.341318 AATCACGCACGCGCTATATA 57.659 45.000 12.02 0.00 44.19 0.86
585 590 1.896345 ATCACGCACGCGCTATATAG 58.104 50.000 12.02 5.30 44.19 1.31
586 591 0.869730 TCACGCACGCGCTATATAGA 59.130 50.000 14.16 0.00 44.19 1.98
587 592 1.264826 TCACGCACGCGCTATATAGAA 59.735 47.619 14.16 0.00 44.19 2.10
588 593 2.048498 CACGCACGCGCTATATAGAAA 58.952 47.619 14.16 0.00 44.19 2.52
589 594 2.661675 CACGCACGCGCTATATAGAAAT 59.338 45.455 14.16 0.00 44.19 2.17
590 595 2.915463 ACGCACGCGCTATATAGAAATC 59.085 45.455 14.16 0.00 44.19 2.17
591 596 3.172050 CGCACGCGCTATATAGAAATCT 58.828 45.455 14.16 0.00 35.30 2.40
592 597 3.608506 CGCACGCGCTATATAGAAATCTT 59.391 43.478 14.16 0.00 35.30 2.40
593 598 4.090066 CGCACGCGCTATATAGAAATCTTT 59.910 41.667 14.16 0.00 35.30 2.52
594 599 5.388475 CGCACGCGCTATATAGAAATCTTTT 60.388 40.000 14.16 0.00 35.30 2.27
595 600 6.363473 GCACGCGCTATATAGAAATCTTTTT 58.637 36.000 14.16 0.00 34.30 1.94
596 601 6.516695 GCACGCGCTATATAGAAATCTTTTTC 59.483 38.462 14.16 0.00 37.35 2.29
597 602 7.564128 CACGCGCTATATAGAAATCTTTTTCA 58.436 34.615 14.16 0.00 43.09 2.69
598 603 7.737744 CACGCGCTATATAGAAATCTTTTTCAG 59.262 37.037 14.16 0.00 43.09 3.02
599 604 6.734171 CGCGCTATATAGAAATCTTTTTCAGC 59.266 38.462 14.16 0.00 43.09 4.26
600 605 7.569408 CGCGCTATATAGAAATCTTTTTCAGCA 60.569 37.037 14.16 0.00 43.09 4.41
601 606 7.532209 GCGCTATATAGAAATCTTTTTCAGCAC 59.468 37.037 14.16 0.00 43.09 4.40
602 607 7.737744 CGCTATATAGAAATCTTTTTCAGCACG 59.262 37.037 14.16 0.00 43.09 5.34
603 608 7.532209 GCTATATAGAAATCTTTTTCAGCACGC 59.468 37.037 14.16 0.00 43.09 5.34
604 609 2.921126 AGAAATCTTTTTCAGCACGCG 58.079 42.857 3.53 3.53 43.09 6.01
605 610 1.383412 GAAATCTTTTTCAGCACGCGC 59.617 47.619 5.73 0.00 40.82 6.86
606 611 0.387239 AATCTTTTTCAGCACGCGCC 60.387 50.000 5.73 0.00 39.83 6.53
607 612 1.237285 ATCTTTTTCAGCACGCGCCT 61.237 50.000 5.73 0.00 39.83 5.52
608 613 1.008538 CTTTTTCAGCACGCGCCTT 60.009 52.632 5.73 0.00 39.83 4.35
609 614 0.237235 CTTTTTCAGCACGCGCCTTA 59.763 50.000 5.73 0.00 39.83 2.69
610 615 0.878416 TTTTTCAGCACGCGCCTTAT 59.122 45.000 5.73 0.00 39.83 1.73
611 616 0.167908 TTTTCAGCACGCGCCTTATG 59.832 50.000 5.73 0.00 39.83 1.90
612 617 0.953471 TTTCAGCACGCGCCTTATGT 60.953 50.000 5.73 0.00 39.83 2.29
613 618 0.108567 TTCAGCACGCGCCTTATGTA 60.109 50.000 5.73 0.00 39.83 2.29
614 619 0.527600 TCAGCACGCGCCTTATGTAG 60.528 55.000 5.73 0.00 39.83 2.74
615 620 1.883084 AGCACGCGCCTTATGTAGC 60.883 57.895 5.73 0.48 39.83 3.58
620 625 3.221956 CGCCTTATGTAGCGCGTC 58.778 61.111 8.43 0.00 46.50 5.19
621 626 1.299165 CGCCTTATGTAGCGCGTCT 60.299 57.895 8.43 8.22 46.50 4.18
622 627 1.540607 CGCCTTATGTAGCGCGTCTG 61.541 60.000 8.43 0.00 46.50 3.51
623 628 0.527817 GCCTTATGTAGCGCGTCTGT 60.528 55.000 8.43 0.00 0.00 3.41
624 629 1.922570 CCTTATGTAGCGCGTCTGTT 58.077 50.000 8.43 0.00 0.00 3.16
625 630 1.588404 CCTTATGTAGCGCGTCTGTTG 59.412 52.381 8.43 0.00 0.00 3.33
626 631 1.588404 CTTATGTAGCGCGTCTGTTGG 59.412 52.381 8.43 0.00 0.00 3.77
627 632 0.812549 TATGTAGCGCGTCTGTTGGA 59.187 50.000 8.43 0.00 0.00 3.53
628 633 0.458543 ATGTAGCGCGTCTGTTGGAG 60.459 55.000 8.43 0.00 0.00 3.86
629 634 1.211969 GTAGCGCGTCTGTTGGAGA 59.788 57.895 8.43 0.00 0.00 3.71
630 635 0.179134 GTAGCGCGTCTGTTGGAGAT 60.179 55.000 8.43 0.00 31.63 2.75
631 636 0.179137 TAGCGCGTCTGTTGGAGATG 60.179 55.000 8.43 0.00 40.33 2.90
636 641 2.376808 CGTCTGTTGGAGATGCTCTT 57.623 50.000 0.00 0.00 30.78 2.85
637 642 1.998315 CGTCTGTTGGAGATGCTCTTG 59.002 52.381 0.00 0.00 30.78 3.02
638 643 2.354259 GTCTGTTGGAGATGCTCTTGG 58.646 52.381 0.00 0.00 31.63 3.61
639 644 1.093159 CTGTTGGAGATGCTCTTGGC 58.907 55.000 0.00 0.00 42.22 4.52
723 728 3.187637 CCATATAAACATACAACGGCCCG 59.812 47.826 0.00 0.00 0.00 6.13
732 737 4.418328 AACGGCCCGCCTTGCATA 62.418 61.111 1.23 0.00 0.00 3.14
738 743 1.524008 GCCCGCCTTGCATATAACCC 61.524 60.000 0.00 0.00 0.00 4.11
739 744 0.893727 CCCGCCTTGCATATAACCCC 60.894 60.000 0.00 0.00 0.00 4.95
857 862 3.099841 TTGGTGCTGGTGGTGGGA 61.100 61.111 0.00 0.00 0.00 4.37
938 943 2.001269 CGAAATCCCCCACCTCCCT 61.001 63.158 0.00 0.00 0.00 4.20
949 954 4.033776 CCTCCCTTCCTTGCGCCA 62.034 66.667 4.18 0.00 0.00 5.69
1101 1106 3.385384 CACTCCTGCCTCCTGCGA 61.385 66.667 0.00 0.00 45.60 5.10
1497 1502 2.350057 TCTACATCTACCTCAGCGCT 57.650 50.000 2.64 2.64 0.00 5.92
1878 1890 8.586570 TGAATACTTGGTTTGTTTATTTGCAG 57.413 30.769 0.00 0.00 0.00 4.41
2040 2055 8.901472 TTCATATTATAGCATGTACTCCCTCT 57.099 34.615 0.00 0.00 0.00 3.69
2041 2056 8.298729 TCATATTATAGCATGTACTCCCTCTG 57.701 38.462 0.00 0.00 0.00 3.35
2042 2057 7.895962 TCATATTATAGCATGTACTCCCTCTGT 59.104 37.037 0.00 0.00 0.00 3.41
2043 2058 6.597832 ATTATAGCATGTACTCCCTCTGTC 57.402 41.667 0.00 0.00 0.00 3.51
2044 2059 1.490574 AGCATGTACTCCCTCTGTCC 58.509 55.000 0.00 0.00 0.00 4.02
2045 2060 0.466124 GCATGTACTCCCTCTGTCCC 59.534 60.000 0.00 0.00 0.00 4.46
2046 2061 1.866015 CATGTACTCCCTCTGTCCCA 58.134 55.000 0.00 0.00 0.00 4.37
2047 2062 2.187958 CATGTACTCCCTCTGTCCCAA 58.812 52.381 0.00 0.00 0.00 4.12
2048 2063 2.409064 TGTACTCCCTCTGTCCCAAA 57.591 50.000 0.00 0.00 0.00 3.28
2049 2064 2.696775 TGTACTCCCTCTGTCCCAAAA 58.303 47.619 0.00 0.00 0.00 2.44
2050 2065 3.256704 TGTACTCCCTCTGTCCCAAAAT 58.743 45.455 0.00 0.00 0.00 1.82
2051 2066 4.431378 TGTACTCCCTCTGTCCCAAAATA 58.569 43.478 0.00 0.00 0.00 1.40
2052 2067 5.036916 TGTACTCCCTCTGTCCCAAAATAT 58.963 41.667 0.00 0.00 0.00 1.28
2053 2068 6.206787 TGTACTCCCTCTGTCCCAAAATATA 58.793 40.000 0.00 0.00 0.00 0.86
2054 2069 6.674861 TGTACTCCCTCTGTCCCAAAATATAA 59.325 38.462 0.00 0.00 0.00 0.98
2055 2070 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
2056 2071 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
2057 2072 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
2058 2073 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
2059 2074 5.527582 CCCTCTGTCCCAAAATATAAGAACG 59.472 44.000 0.00 0.00 0.00 3.95
2060 2075 6.113411 CCTCTGTCCCAAAATATAAGAACGT 58.887 40.000 0.00 0.00 0.00 3.99
2061 2076 6.598064 CCTCTGTCCCAAAATATAAGAACGTT 59.402 38.462 0.00 0.00 0.00 3.99
2062 2077 7.120726 CCTCTGTCCCAAAATATAAGAACGTTT 59.879 37.037 0.46 0.00 0.00 3.60
2063 2078 8.398878 TCTGTCCCAAAATATAAGAACGTTTT 57.601 30.769 0.46 0.00 0.00 2.43
2064 2079 8.852135 TCTGTCCCAAAATATAAGAACGTTTTT 58.148 29.630 9.22 9.22 0.00 1.94
2065 2080 8.804688 TGTCCCAAAATATAAGAACGTTTTTG 57.195 30.769 13.87 12.16 37.14 2.44
2066 2081 8.630917 TGTCCCAAAATATAAGAACGTTTTTGA 58.369 29.630 13.87 2.81 38.79 2.69
2067 2082 8.908678 GTCCCAAAATATAAGAACGTTTTTGAC 58.091 33.333 13.87 5.89 38.79 3.18
2068 2083 8.630917 TCCCAAAATATAAGAACGTTTTTGACA 58.369 29.630 13.87 0.01 38.79 3.58
2069 2084 8.696175 CCCAAAATATAAGAACGTTTTTGACAC 58.304 33.333 13.87 0.00 38.79 3.67
2070 2085 9.458374 CCAAAATATAAGAACGTTTTTGACACT 57.542 29.630 13.87 0.00 38.79 3.55
2078 2093 8.603242 AAGAACGTTTTTGACACTATGATAGT 57.397 30.769 0.46 0.00 40.28 2.12
2079 2094 9.701098 AAGAACGTTTTTGACACTATGATAGTA 57.299 29.630 4.56 0.00 37.23 1.82
2080 2095 9.871238 AGAACGTTTTTGACACTATGATAGTAT 57.129 29.630 4.56 0.00 37.23 2.12
2082 2097 9.647797 AACGTTTTTGACACTATGATAGTATCA 57.352 29.630 15.10 15.10 40.20 2.15
2083 2098 9.647797 ACGTTTTTGACACTATGATAGTATCAA 57.352 29.630 19.25 19.25 46.91 2.57
2089 2104 9.647797 TTGACACTATGATAGTATCAAAAACGT 57.352 29.630 20.47 10.26 45.96 3.99
2090 2105 9.647797 TGACACTATGATAGTATCAAAAACGTT 57.352 29.630 16.61 0.00 39.11 3.99
2092 2107 9.871238 ACACTATGATAGTATCAAAAACGTTCT 57.129 29.630 16.61 0.15 43.50 3.01
2105 2120 9.634163 ATCAAAAACGTTCTTATATTTTGGGAC 57.366 29.630 15.53 0.00 39.94 4.46
2106 2121 8.630917 TCAAAAACGTTCTTATATTTTGGGACA 58.369 29.630 15.53 0.00 39.94 4.02
2107 2122 8.911662 CAAAAACGTTCTTATATTTTGGGACAG 58.088 33.333 0.00 0.00 42.39 3.51
2108 2123 7.989416 AAACGTTCTTATATTTTGGGACAGA 57.011 32.000 0.00 0.00 42.39 3.41
2109 2124 7.611213 AACGTTCTTATATTTTGGGACAGAG 57.389 36.000 0.00 0.00 42.39 3.35
2110 2125 6.113411 ACGTTCTTATATTTTGGGACAGAGG 58.887 40.000 0.00 0.00 42.39 3.69
2111 2126 5.527582 CGTTCTTATATTTTGGGACAGAGGG 59.472 44.000 0.00 0.00 42.39 4.30
2112 2127 6.631766 CGTTCTTATATTTTGGGACAGAGGGA 60.632 42.308 0.00 0.00 42.39 4.20
2181 2196 9.494271 TTGTAATATTGATAGGATCAGCAAGTC 57.506 33.333 0.00 0.00 40.94 3.01
2182 2197 8.874156 TGTAATATTGATAGGATCAGCAAGTCT 58.126 33.333 0.00 0.00 40.94 3.24
2185 2200 4.862902 TGATAGGATCAGCAAGTCTAGC 57.137 45.455 0.00 0.00 33.59 3.42
2186 2201 4.218312 TGATAGGATCAGCAAGTCTAGCA 58.782 43.478 0.00 0.00 33.59 3.49
2187 2202 2.977772 AGGATCAGCAAGTCTAGCAC 57.022 50.000 0.00 0.00 0.00 4.40
2188 2203 2.182827 AGGATCAGCAAGTCTAGCACA 58.817 47.619 0.00 0.00 0.00 4.57
2189 2204 2.770802 AGGATCAGCAAGTCTAGCACAT 59.229 45.455 0.00 0.00 0.00 3.21
2190 2205 3.963374 AGGATCAGCAAGTCTAGCACATA 59.037 43.478 0.00 0.00 0.00 2.29
2191 2206 4.406972 AGGATCAGCAAGTCTAGCACATAA 59.593 41.667 0.00 0.00 0.00 1.90
2192 2207 5.071519 AGGATCAGCAAGTCTAGCACATAAT 59.928 40.000 0.00 0.00 0.00 1.28
2193 2208 5.407995 GGATCAGCAAGTCTAGCACATAATC 59.592 44.000 0.00 0.00 0.00 1.75
2194 2209 4.697514 TCAGCAAGTCTAGCACATAATCC 58.302 43.478 0.00 0.00 0.00 3.01
2195 2210 3.812053 CAGCAAGTCTAGCACATAATCCC 59.188 47.826 0.00 0.00 0.00 3.85
2196 2211 3.713764 AGCAAGTCTAGCACATAATCCCT 59.286 43.478 0.00 0.00 0.00 4.20
2197 2212 4.164988 AGCAAGTCTAGCACATAATCCCTT 59.835 41.667 0.00 0.00 0.00 3.95
2198 2213 4.274459 GCAAGTCTAGCACATAATCCCTTG 59.726 45.833 0.00 0.00 0.00 3.61
2199 2214 4.078639 AGTCTAGCACATAATCCCTTGC 57.921 45.455 0.00 0.00 35.08 4.01
2200 2215 3.455910 AGTCTAGCACATAATCCCTTGCA 59.544 43.478 0.00 0.00 37.44 4.08
2201 2216 4.103785 AGTCTAGCACATAATCCCTTGCAT 59.896 41.667 0.00 0.00 37.44 3.96
2202 2217 4.214971 GTCTAGCACATAATCCCTTGCATG 59.785 45.833 0.00 0.00 37.44 4.06
2203 2218 3.301794 AGCACATAATCCCTTGCATGA 57.698 42.857 0.00 0.00 37.44 3.07
2204 2219 3.634504 AGCACATAATCCCTTGCATGAA 58.365 40.909 0.00 0.00 37.44 2.57
2205 2220 4.025360 AGCACATAATCCCTTGCATGAAA 58.975 39.130 0.00 0.00 37.44 2.69
2206 2221 4.098960 AGCACATAATCCCTTGCATGAAAG 59.901 41.667 6.44 6.44 37.44 2.62
2207 2222 4.738541 GCACATAATCCCTTGCATGAAAGG 60.739 45.833 24.19 24.19 45.48 3.11
2208 2223 4.403432 CACATAATCCCTTGCATGAAAGGT 59.597 41.667 27.80 14.37 44.58 3.50
2209 2224 5.025453 ACATAATCCCTTGCATGAAAGGTT 58.975 37.500 27.80 19.52 44.58 3.50
2210 2225 3.967332 AATCCCTTGCATGAAAGGTTG 57.033 42.857 27.80 15.58 44.58 3.77
2211 2226 0.968405 TCCCTTGCATGAAAGGTTGC 59.032 50.000 27.80 0.00 44.58 4.17
2212 2227 0.971386 CCCTTGCATGAAAGGTTGCT 59.029 50.000 27.80 0.00 44.58 3.91
2213 2228 1.337447 CCCTTGCATGAAAGGTTGCTG 60.337 52.381 27.80 10.96 44.58 4.41
2214 2229 1.614903 CCTTGCATGAAAGGTTGCTGA 59.385 47.619 23.02 0.00 41.65 4.26
2215 2230 2.036217 CCTTGCATGAAAGGTTGCTGAA 59.964 45.455 23.02 0.00 41.65 3.02
2216 2231 3.314553 CTTGCATGAAAGGTTGCTGAAG 58.685 45.455 5.41 0.00 39.60 3.02
2217 2232 2.309613 TGCATGAAAGGTTGCTGAAGT 58.690 42.857 0.00 0.00 39.60 3.01
2218 2233 2.034939 TGCATGAAAGGTTGCTGAAGTG 59.965 45.455 0.00 0.00 39.60 3.16
2219 2234 2.294233 GCATGAAAGGTTGCTGAAGTGA 59.706 45.455 0.00 0.00 35.95 3.41
2220 2235 3.057033 GCATGAAAGGTTGCTGAAGTGAT 60.057 43.478 0.00 0.00 35.95 3.06
2221 2236 4.156556 GCATGAAAGGTTGCTGAAGTGATA 59.843 41.667 0.00 0.00 35.95 2.15
2222 2237 5.335897 GCATGAAAGGTTGCTGAAGTGATAA 60.336 40.000 0.00 0.00 35.95 1.75
2223 2238 6.680810 CATGAAAGGTTGCTGAAGTGATAAA 58.319 36.000 0.00 0.00 0.00 1.40
2224 2239 6.707440 TGAAAGGTTGCTGAAGTGATAAAA 57.293 33.333 0.00 0.00 0.00 1.52
2225 2240 7.106439 TGAAAGGTTGCTGAAGTGATAAAAA 57.894 32.000 0.00 0.00 0.00 1.94
2226 2241 7.725251 TGAAAGGTTGCTGAAGTGATAAAAAT 58.275 30.769 0.00 0.00 0.00 1.82
2227 2242 8.855110 TGAAAGGTTGCTGAAGTGATAAAAATA 58.145 29.630 0.00 0.00 0.00 1.40
2228 2243 9.691362 GAAAGGTTGCTGAAGTGATAAAAATAA 57.309 29.630 0.00 0.00 0.00 1.40
2229 2244 9.696917 AAAGGTTGCTGAAGTGATAAAAATAAG 57.303 29.630 0.00 0.00 0.00 1.73
2230 2245 7.830739 AGGTTGCTGAAGTGATAAAAATAAGG 58.169 34.615 0.00 0.00 0.00 2.69
2231 2246 7.669722 AGGTTGCTGAAGTGATAAAAATAAGGA 59.330 33.333 0.00 0.00 0.00 3.36
2232 2247 8.470002 GGTTGCTGAAGTGATAAAAATAAGGAT 58.530 33.333 0.00 0.00 0.00 3.24
2233 2248 9.294030 GTTGCTGAAGTGATAAAAATAAGGATG 57.706 33.333 0.00 0.00 0.00 3.51
2234 2249 7.483307 TGCTGAAGTGATAAAAATAAGGATGC 58.517 34.615 0.00 0.00 0.00 3.91
2235 2250 7.340232 TGCTGAAGTGATAAAAATAAGGATGCT 59.660 33.333 0.00 0.00 0.00 3.79
2236 2251 7.859875 GCTGAAGTGATAAAAATAAGGATGCTC 59.140 37.037 0.00 0.00 0.00 4.26
2237 2252 8.806429 TGAAGTGATAAAAATAAGGATGCTCA 57.194 30.769 0.00 0.00 0.00 4.26
2238 2253 9.412460 TGAAGTGATAAAAATAAGGATGCTCAT 57.588 29.630 0.00 0.00 0.00 2.90
2239 2254 9.890352 GAAGTGATAAAAATAAGGATGCTCATC 57.110 33.333 1.35 1.35 37.11 2.92
2240 2255 8.985315 AGTGATAAAAATAAGGATGCTCATCA 57.015 30.769 11.49 0.00 39.54 3.07
2241 2256 8.844244 AGTGATAAAAATAAGGATGCTCATCAC 58.156 33.333 11.49 0.00 39.54 3.06
2242 2257 8.844244 GTGATAAAAATAAGGATGCTCATCACT 58.156 33.333 11.49 4.19 39.54 3.41
2243 2258 9.412460 TGATAAAAATAAGGATGCTCATCACTT 57.588 29.630 11.49 12.90 39.54 3.16
2246 2261 8.814038 AAAAATAAGGATGCTCATCACTTACT 57.186 30.769 11.49 4.84 39.54 2.24
2273 2354 2.700371 TCTTCACTCTTTCCTGCAGTGA 59.300 45.455 13.81 5.76 43.81 3.41
2404 2610 7.335924 GGTGAAGTTACCAAAGTAAGCATGATA 59.664 37.037 0.00 0.00 39.13 2.15
2493 2729 9.638239 AAACATTGCGTTCATTACATAAAGAAT 57.362 25.926 0.00 0.00 36.59 2.40
2536 2776 1.212935 CCAAGCACCTTACCTAGCCAT 59.787 52.381 0.00 0.00 0.00 4.40
2603 2843 0.459585 TGCAGCGGACGAACTATTCC 60.460 55.000 0.00 0.00 0.00 3.01
2611 2851 4.181578 CGGACGAACTATTCCAACAATCT 58.818 43.478 0.00 0.00 0.00 2.40
2703 2943 2.619646 GGGTTTTGTTTGGAGCGTAAGA 59.380 45.455 0.00 0.00 43.02 2.10
2792 3033 8.291740 TCAATGAAATCATACACAAGTGAACAG 58.708 33.333 7.28 0.00 35.10 3.16
2909 3150 4.382345 TTTCTTAGCCTAGGTAGCGAAC 57.618 45.455 11.31 0.00 34.64 3.95
2940 3182 4.278419 ACTCTTACCAATCAGTTTGCAACC 59.722 41.667 0.00 0.00 33.73 3.77
3330 3574 7.094205 ACCAAAGGATACATTTTAGCAGTGAAG 60.094 37.037 0.00 0.00 41.41 3.02
3402 3646 2.028748 GGTGAAAACCTAGTGACGCCTA 60.029 50.000 0.00 0.00 0.00 3.93
3447 3691 3.652055 AGTCCTTCTCATACAGGCATCT 58.348 45.455 0.00 0.00 0.00 2.90
3537 3781 1.674908 GCGTGTTGCAGCTTTTCTAC 58.325 50.000 1.17 0.00 45.45 2.59
3585 3829 5.305585 ACTGTTTAGTAACATGACCACTGG 58.694 41.667 0.00 0.00 43.02 4.00
3641 3885 0.515127 TAACATTTGACGCCGCACAG 59.485 50.000 0.00 0.00 0.00 3.66
3642 3886 1.444119 AACATTTGACGCCGCACAGT 61.444 50.000 0.00 0.00 0.00 3.55
3643 3887 1.154413 CATTTGACGCCGCACAGTC 60.154 57.895 0.00 0.00 37.85 3.51
3716 3963 6.796785 ATGCTTAATTGTGGATAAGCCTTT 57.203 33.333 13.22 0.00 42.91 3.11
3725 3972 6.662865 TGTGGATAAGCCTTTCATTTGAAA 57.337 33.333 5.67 5.67 41.41 2.69
3737 3984 8.375465 GCCTTTCATTTGAAATATTTCAGTTCG 58.625 33.333 25.58 17.21 46.68 3.95
3923 4179 2.096119 GCTGCACAATTGTTTTGATGGC 60.096 45.455 8.77 8.08 0.00 4.40
3942 4198 3.449018 TGGCTACTCAGATCTGAACCTTC 59.551 47.826 25.09 15.11 39.39 3.46
4025 4283 5.355350 GCTTATTCTGCAAGGTCACACTATT 59.645 40.000 0.00 0.00 0.00 1.73
4043 4301 7.118825 CACACTATTGTCTATATCCTTGCCATG 59.881 40.741 0.00 0.00 31.66 3.66
4051 4309 2.717639 ATCCTTGCCATGTCTACCAC 57.282 50.000 0.00 0.00 0.00 4.16
4059 4317 2.418746 GCCATGTCTACCACGATGTTCT 60.419 50.000 0.00 0.00 0.00 3.01
4060 4318 3.861840 CCATGTCTACCACGATGTTCTT 58.138 45.455 0.00 0.00 0.00 2.52
4092 4350 3.281727 TGCCATGGGAGACATAGAAAC 57.718 47.619 15.13 0.00 37.84 2.78
4134 4392 4.928601 TCGTTCCCTGTAAATCAGATACG 58.071 43.478 0.00 0.00 46.27 3.06
4144 4402 6.442112 TGTAAATCAGATACGAGAGCAGATG 58.558 40.000 0.00 0.00 0.00 2.90
4163 4421 9.852091 AGCAGATGAAGATCTTTAACAAAATTC 57.148 29.630 9.87 0.00 36.75 2.17
4164 4422 8.792538 GCAGATGAAGATCTTTAACAAAATTCG 58.207 33.333 9.87 0.00 36.75 3.34
4223 4481 2.224079 CGAACTCATGTCTTGTTGGTGG 59.776 50.000 0.00 0.00 0.00 4.61
4234 4492 3.900941 CTTGTTGGTGGTCAATAAGTGC 58.099 45.455 6.95 0.00 44.43 4.40
4238 4496 0.727398 GGTGGTCAATAAGTGCGAGC 59.273 55.000 0.00 0.00 0.00 5.03
4249 4507 5.734855 ATAAGTGCGAGCAATTACGAAAT 57.265 34.783 18.17 2.90 38.91 2.17
4287 4545 6.303839 TCTCATTTTAGGGCAGTGTTTAACT 58.696 36.000 0.00 0.00 40.93 2.24
4288 4546 6.775629 TCTCATTTTAGGGCAGTGTTTAACTT 59.224 34.615 0.00 0.00 36.83 2.66
4289 4547 7.286775 TCTCATTTTAGGGCAGTGTTTAACTTT 59.713 33.333 0.00 0.00 36.83 2.66
4301 4559 7.970384 CAGTGTTTAACTTTACTCACTGTCAA 58.030 34.615 16.55 0.00 44.01 3.18
4327 4585 7.574496 GCATCAGCTATGTTTTCTTCTCATAG 58.426 38.462 0.00 0.00 41.96 2.23
4387 4645 6.369890 TGTTTGATCATCTGCAGACTTTCTAC 59.630 38.462 20.97 16.07 0.00 2.59
4391 4649 5.836821 TCATCTGCAGACTTTCTACGTAT 57.163 39.130 20.97 0.00 0.00 3.06
4393 4651 6.726230 TCATCTGCAGACTTTCTACGTATAC 58.274 40.000 20.97 0.00 0.00 1.47
4394 4652 6.542735 TCATCTGCAGACTTTCTACGTATACT 59.457 38.462 20.97 0.00 0.00 2.12
4417 4675 7.151308 ACTATAGAGCTCATGATTGTACTTGC 58.849 38.462 17.77 0.00 0.00 4.01
4435 4693 6.992063 ACTTGCAACAAGAAATCGATATCT 57.008 33.333 13.94 0.00 0.00 1.98
4437 4695 7.467623 ACTTGCAACAAGAAATCGATATCTTC 58.532 34.615 13.94 0.00 33.73 2.87
4467 4843 7.806690 TGCATCTTTGAAGTACTCATTGTAAC 58.193 34.615 0.00 0.00 32.78 2.50
4474 4850 6.509656 TGAAGTACTCATTGTAACGACACTT 58.490 36.000 0.00 0.00 34.48 3.16
4486 4862 2.285977 ACGACACTTGGTTTCTGGTTC 58.714 47.619 0.00 0.00 0.00 3.62
4513 4889 8.248945 ACTTTGAGATTTGAATGGAAGCATAAG 58.751 33.333 0.00 0.00 0.00 1.73
4514 4890 6.140303 TGAGATTTGAATGGAAGCATAAGC 57.860 37.500 0.00 0.00 42.56 3.09
4532 4908 4.724279 AAGCTCCTTTCTTAACCTTGGA 57.276 40.909 0.00 0.00 0.00 3.53
4561 4941 6.379417 TCATGATACTGATGGCTATCTACCTG 59.621 42.308 11.68 0.98 34.31 4.00
4621 5001 3.596214 TCTTTTGAAGCTCACGATACCC 58.404 45.455 0.00 0.00 0.00 3.69
4663 5043 5.537188 TGGAACAAATTTTATGTCTGTGCC 58.463 37.500 0.00 0.00 36.39 5.01
4831 5211 5.140177 CACTTCCGTTTTGAGAAAGAATCG 58.860 41.667 0.00 0.00 0.00 3.34
4845 5225 4.756084 AAGAATCGCCAGAAACAGAAAG 57.244 40.909 0.00 0.00 0.00 2.62
5017 5397 1.461127 GTCGGTGATCTTGTTGCTGAC 59.539 52.381 0.00 0.00 0.00 3.51
5024 5404 1.009675 CTTGTTGCTGACGTGGCAC 60.010 57.895 7.79 7.79 39.55 5.01
5092 5472 1.404583 GGCCCAATGTTCAACATGCTC 60.405 52.381 3.07 0.00 37.97 4.26
5386 5766 4.212213 TGTGTGTACGGTAATTGTTTGC 57.788 40.909 0.00 0.00 0.00 3.68
5537 5934 9.419297 CATTCCATATTTTATGAATTGCAGAGG 57.581 33.333 0.00 0.00 0.00 3.69
5641 6038 1.177401 GTTTTCCTCACTCCCCATGC 58.823 55.000 0.00 0.00 0.00 4.06
5679 6076 4.772886 ACAGTTACAACCTCCTGTTTCT 57.227 40.909 0.00 0.00 34.64 2.52
5680 6077 5.112129 ACAGTTACAACCTCCTGTTTCTT 57.888 39.130 0.00 0.00 34.64 2.52
5681 6078 5.506708 ACAGTTACAACCTCCTGTTTCTTT 58.493 37.500 0.00 0.00 34.64 2.52
5783 6180 2.096218 GTCCTTGTCGTCTCAAATGTGC 60.096 50.000 0.00 0.00 0.00 4.57
5854 6332 6.349300 TGAAAAATCTAGAGCATGGGTAGTC 58.651 40.000 0.00 0.00 0.00 2.59
5872 6350 2.907042 AGTCCGACTTCCTCTCCAATTT 59.093 45.455 0.00 0.00 0.00 1.82
5873 6351 4.094476 AGTCCGACTTCCTCTCCAATTTA 58.906 43.478 0.00 0.00 0.00 1.40
5874 6352 4.717280 AGTCCGACTTCCTCTCCAATTTAT 59.283 41.667 0.00 0.00 0.00 1.40
5875 6353 5.897824 AGTCCGACTTCCTCTCCAATTTATA 59.102 40.000 0.00 0.00 0.00 0.98
5930 6563 8.300286 TCGAGCTATTGATTATTTTCGATCTCT 58.700 33.333 0.00 0.00 31.74 3.10
5995 6631 2.386661 TCCATTCAGAAGAAGCCGAC 57.613 50.000 0.00 0.00 37.14 4.79
6012 6648 1.004595 GACGGTTGCTCGGTTTATCC 58.995 55.000 0.00 0.00 0.00 2.59
6078 6718 3.181480 GCAAACTAGGACCAAAGCACAAA 60.181 43.478 0.00 0.00 0.00 2.83
6079 6719 4.359706 CAAACTAGGACCAAAGCACAAAC 58.640 43.478 0.00 0.00 0.00 2.93
6143 6783 8.612619 ACAAACAGAAAAGTACATTGTCTACAG 58.387 33.333 0.00 0.00 0.00 2.74
6149 6789 9.046296 AGAAAAGTACATTGTCTACAGAAACAG 57.954 33.333 0.00 0.00 0.00 3.16
6262 6904 1.337074 CCGCCACAAGCATGTTTGATT 60.337 47.619 26.57 4.50 44.04 2.57
6263 6905 2.406130 CGCCACAAGCATGTTTGATTT 58.594 42.857 26.57 3.78 44.04 2.17
6264 6906 2.801679 CGCCACAAGCATGTTTGATTTT 59.198 40.909 26.57 3.41 44.04 1.82
6265 6907 3.248125 CGCCACAAGCATGTTTGATTTTT 59.752 39.130 26.57 3.04 44.04 1.94
6283 6925 3.863606 TTTTTGAAGCCCCACCCG 58.136 55.556 0.00 0.00 0.00 5.28
6284 6926 1.075896 TTTTTGAAGCCCCACCCGT 60.076 52.632 0.00 0.00 0.00 5.28
6285 6927 0.185416 TTTTTGAAGCCCCACCCGTA 59.815 50.000 0.00 0.00 0.00 4.02
6286 6928 0.250989 TTTTGAAGCCCCACCCGTAG 60.251 55.000 0.00 0.00 0.00 3.51
6287 6929 1.128809 TTTGAAGCCCCACCCGTAGA 61.129 55.000 0.00 0.00 0.00 2.59
6288 6930 1.128809 TTGAAGCCCCACCCGTAGAA 61.129 55.000 0.00 0.00 0.00 2.10
6289 6931 1.078637 GAAGCCCCACCCGTAGAAC 60.079 63.158 0.00 0.00 0.00 3.01
6290 6932 1.833787 GAAGCCCCACCCGTAGAACA 61.834 60.000 0.00 0.00 0.00 3.18
6291 6933 1.420532 AAGCCCCACCCGTAGAACAA 61.421 55.000 0.00 0.00 0.00 2.83
6292 6934 1.205460 AGCCCCACCCGTAGAACAAT 61.205 55.000 0.00 0.00 0.00 2.71
6293 6935 0.542805 GCCCCACCCGTAGAACAATA 59.457 55.000 0.00 0.00 0.00 1.90
6294 6936 1.474498 GCCCCACCCGTAGAACAATAG 60.474 57.143 0.00 0.00 0.00 1.73
6295 6937 1.835531 CCCCACCCGTAGAACAATAGT 59.164 52.381 0.00 0.00 0.00 2.12
6296 6938 2.237893 CCCCACCCGTAGAACAATAGTT 59.762 50.000 0.00 0.00 41.64 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.417754 AGAATGATGTGACTGACATGACT 57.582 39.130 0.00 0.00 45.90 3.41
1 2 4.569966 GGAGAATGATGTGACTGACATGAC 59.430 45.833 0.00 0.00 45.90 3.06
2 3 4.468868 AGGAGAATGATGTGACTGACATGA 59.531 41.667 0.00 0.00 45.90 3.07
3 4 4.767478 AGGAGAATGATGTGACTGACATG 58.233 43.478 0.00 0.00 45.90 3.21
5 6 6.550938 ATTAGGAGAATGATGTGACTGACA 57.449 37.500 0.00 0.00 39.53 3.58
6 7 8.986847 CATTATTAGGAGAATGATGTGACTGAC 58.013 37.037 0.00 0.00 36.76 3.51
7 8 8.708378 ACATTATTAGGAGAATGATGTGACTGA 58.292 33.333 6.83 0.00 36.76 3.41
8 9 8.899427 ACATTATTAGGAGAATGATGTGACTG 57.101 34.615 6.83 0.00 36.76 3.51
12 13 8.944029 GGATCACATTATTAGGAGAATGATGTG 58.056 37.037 20.62 20.62 46.86 3.21
13 14 8.105829 GGGATCACATTATTAGGAGAATGATGT 58.894 37.037 0.00 2.78 36.76 3.06
14 15 7.279536 CGGGATCACATTATTAGGAGAATGATG 59.720 40.741 0.00 1.70 36.76 3.07
15 16 7.038017 ACGGGATCACATTATTAGGAGAATGAT 60.038 37.037 0.00 0.00 36.76 2.45
16 17 6.270000 ACGGGATCACATTATTAGGAGAATGA 59.730 38.462 0.00 0.00 36.76 2.57
17 18 6.467677 ACGGGATCACATTATTAGGAGAATG 58.532 40.000 0.00 0.00 39.71 2.67
18 19 6.688073 ACGGGATCACATTATTAGGAGAAT 57.312 37.500 0.00 0.00 0.00 2.40
19 20 6.494666 AACGGGATCACATTATTAGGAGAA 57.505 37.500 0.00 0.00 0.00 2.87
20 21 7.606135 TTAACGGGATCACATTATTAGGAGA 57.394 36.000 0.00 0.00 0.00 3.71
21 22 8.094548 TGATTAACGGGATCACATTATTAGGAG 58.905 37.037 0.00 0.00 0.00 3.69
22 23 7.969004 TGATTAACGGGATCACATTATTAGGA 58.031 34.615 0.00 0.00 0.00 2.94
23 24 8.615878 TTGATTAACGGGATCACATTATTAGG 57.384 34.615 0.00 0.00 33.51 2.69
26 27 9.130661 TCATTTGATTAACGGGATCACATTATT 57.869 29.630 0.00 0.00 33.51 1.40
27 28 8.567948 GTCATTTGATTAACGGGATCACATTAT 58.432 33.333 0.00 0.00 33.51 1.28
28 29 7.554476 TGTCATTTGATTAACGGGATCACATTA 59.446 33.333 0.00 0.00 33.51 1.90
29 30 6.376864 TGTCATTTGATTAACGGGATCACATT 59.623 34.615 0.00 0.00 33.51 2.71
30 31 5.885352 TGTCATTTGATTAACGGGATCACAT 59.115 36.000 0.00 0.00 33.51 3.21
31 32 5.249420 TGTCATTTGATTAACGGGATCACA 58.751 37.500 0.00 0.00 33.51 3.58
32 33 5.811399 TGTCATTTGATTAACGGGATCAC 57.189 39.130 0.00 0.00 33.51 3.06
33 34 5.943416 AGTTGTCATTTGATTAACGGGATCA 59.057 36.000 0.00 0.00 32.73 2.92
34 35 6.436843 AGTTGTCATTTGATTAACGGGATC 57.563 37.500 0.00 0.00 32.73 3.36
35 36 7.931578 TTAGTTGTCATTTGATTAACGGGAT 57.068 32.000 0.00 0.00 32.73 3.85
36 37 7.392113 ACATTAGTTGTCATTTGATTAACGGGA 59.608 33.333 0.00 0.00 30.89 5.14
37 38 7.535139 ACATTAGTTGTCATTTGATTAACGGG 58.465 34.615 0.00 0.00 30.89 5.28
52 53 8.380099 TGTTTCCTAACCATAGACATTAGTTGT 58.620 33.333 0.00 0.00 35.80 3.32
53 54 8.786826 TGTTTCCTAACCATAGACATTAGTTG 57.213 34.615 0.00 0.00 33.15 3.16
57 58 9.841295 GGTTATGTTTCCTAACCATAGACATTA 57.159 33.333 7.24 0.00 44.95 1.90
58 59 8.747538 GGTTATGTTTCCTAACCATAGACATT 57.252 34.615 7.24 0.00 44.95 2.71
67 68 7.696992 TCAAAGATGGTTATGTTTCCTAACC 57.303 36.000 5.49 5.49 45.53 2.85
68 69 8.956426 TGATCAAAGATGGTTATGTTTCCTAAC 58.044 33.333 0.00 0.00 28.23 2.34
69 70 9.527157 TTGATCAAAGATGGTTATGTTTCCTAA 57.473 29.630 5.45 0.00 28.23 2.69
70 71 8.956426 GTTGATCAAAGATGGTTATGTTTCCTA 58.044 33.333 10.35 0.00 28.23 2.94
71 72 7.362056 CGTTGATCAAAGATGGTTATGTTTCCT 60.362 37.037 15.34 0.00 28.23 3.36
72 73 6.747280 CGTTGATCAAAGATGGTTATGTTTCC 59.253 38.462 15.34 0.00 28.23 3.13
73 74 7.526608 TCGTTGATCAAAGATGGTTATGTTTC 58.473 34.615 18.50 0.00 28.23 2.78
74 75 7.447374 TCGTTGATCAAAGATGGTTATGTTT 57.553 32.000 18.50 0.00 30.61 2.83
75 76 6.403636 GCTCGTTGATCAAAGATGGTTATGTT 60.404 38.462 21.83 0.00 0.00 2.71
76 77 5.065218 GCTCGTTGATCAAAGATGGTTATGT 59.935 40.000 21.83 0.00 0.00 2.29
77 78 5.295292 AGCTCGTTGATCAAAGATGGTTATG 59.705 40.000 21.83 11.16 0.00 1.90
78 79 5.431765 AGCTCGTTGATCAAAGATGGTTAT 58.568 37.500 21.83 4.91 0.00 1.89
79 80 4.832248 AGCTCGTTGATCAAAGATGGTTA 58.168 39.130 21.83 1.90 0.00 2.85
80 81 3.679389 AGCTCGTTGATCAAAGATGGTT 58.321 40.909 21.83 8.86 0.00 3.67
81 82 3.340814 AGCTCGTTGATCAAAGATGGT 57.659 42.857 21.83 17.63 0.00 3.55
82 83 4.437239 ACTAGCTCGTTGATCAAAGATGG 58.563 43.478 21.83 14.18 0.00 3.51
83 84 7.276658 ACTTAACTAGCTCGTTGATCAAAGATG 59.723 37.037 21.83 16.63 0.00 2.90
84 85 7.324178 ACTTAACTAGCTCGTTGATCAAAGAT 58.676 34.615 21.83 12.82 0.00 2.40
85 86 6.688578 ACTTAACTAGCTCGTTGATCAAAGA 58.311 36.000 20.62 20.62 0.00 2.52
86 87 6.952935 ACTTAACTAGCTCGTTGATCAAAG 57.047 37.500 10.35 12.64 0.00 2.77
87 88 7.823665 TCTACTTAACTAGCTCGTTGATCAAA 58.176 34.615 10.35 0.00 0.00 2.69
88 89 7.387119 TCTACTTAACTAGCTCGTTGATCAA 57.613 36.000 13.54 3.38 0.00 2.57
89 90 6.038382 CCTCTACTTAACTAGCTCGTTGATCA 59.962 42.308 13.54 0.00 0.00 2.92
90 91 6.432107 CCTCTACTTAACTAGCTCGTTGATC 58.568 44.000 13.54 0.00 0.00 2.92
91 92 5.221087 GCCTCTACTTAACTAGCTCGTTGAT 60.221 44.000 13.54 2.07 0.00 2.57
92 93 4.096081 GCCTCTACTTAACTAGCTCGTTGA 59.904 45.833 13.54 4.72 0.00 3.18
93 94 4.142447 TGCCTCTACTTAACTAGCTCGTTG 60.142 45.833 13.54 0.77 0.00 4.10
94 95 4.015084 TGCCTCTACTTAACTAGCTCGTT 58.985 43.478 8.82 8.82 0.00 3.85
95 96 3.618351 TGCCTCTACTTAACTAGCTCGT 58.382 45.455 0.00 0.00 0.00 4.18
96 97 4.839668 ATGCCTCTACTTAACTAGCTCG 57.160 45.455 0.00 0.00 0.00 5.03
97 98 6.887626 AGTATGCCTCTACTTAACTAGCTC 57.112 41.667 0.00 0.00 0.00 4.09
98 99 7.446013 CACTAGTATGCCTCTACTTAACTAGCT 59.554 40.741 0.00 0.00 33.96 3.32
99 100 7.444792 TCACTAGTATGCCTCTACTTAACTAGC 59.555 40.741 0.00 0.00 33.96 3.42
100 101 8.776470 GTCACTAGTATGCCTCTACTTAACTAG 58.224 40.741 0.00 0.00 33.96 2.57
101 102 8.270030 TGTCACTAGTATGCCTCTACTTAACTA 58.730 37.037 0.00 0.00 33.96 2.24
102 103 7.067251 GTGTCACTAGTATGCCTCTACTTAACT 59.933 40.741 0.00 0.00 33.96 2.24
103 104 7.067251 AGTGTCACTAGTATGCCTCTACTTAAC 59.933 40.741 2.87 0.00 33.96 2.01
104 105 7.117397 AGTGTCACTAGTATGCCTCTACTTAA 58.883 38.462 2.87 0.00 33.96 1.85
105 106 6.660800 AGTGTCACTAGTATGCCTCTACTTA 58.339 40.000 2.87 0.00 33.96 2.24
106 107 5.511363 AGTGTCACTAGTATGCCTCTACTT 58.489 41.667 2.87 0.00 33.96 2.24
107 108 5.104277 AGAGTGTCACTAGTATGCCTCTACT 60.104 44.000 5.21 0.00 36.04 2.57
108 109 5.008217 CAGAGTGTCACTAGTATGCCTCTAC 59.992 48.000 5.21 0.00 0.00 2.59
109 110 5.126779 CAGAGTGTCACTAGTATGCCTCTA 58.873 45.833 5.21 0.00 0.00 2.43
110 111 3.951037 CAGAGTGTCACTAGTATGCCTCT 59.049 47.826 5.21 1.89 0.00 3.69
111 112 3.697045 ACAGAGTGTCACTAGTATGCCTC 59.303 47.826 5.21 0.00 0.00 4.70
112 113 3.702792 ACAGAGTGTCACTAGTATGCCT 58.297 45.455 5.21 0.00 0.00 4.75
113 114 4.457834 AACAGAGTGTCACTAGTATGCC 57.542 45.455 5.21 0.00 0.00 4.40
114 115 5.230942 ACAAACAGAGTGTCACTAGTATGC 58.769 41.667 5.21 0.00 0.00 3.14
115 116 6.682746 AGACAAACAGAGTGTCACTAGTATG 58.317 40.000 5.21 5.56 46.44 2.39
116 117 6.902771 AGACAAACAGAGTGTCACTAGTAT 57.097 37.500 5.21 0.00 46.44 2.12
117 118 7.997773 ATAGACAAACAGAGTGTCACTAGTA 57.002 36.000 5.21 0.00 46.44 1.82
118 119 6.902771 ATAGACAAACAGAGTGTCACTAGT 57.097 37.500 5.21 5.11 46.44 2.57
122 123 9.803315 TGAATATATAGACAAACAGAGTGTCAC 57.197 33.333 7.26 0.00 46.44 3.67
123 124 9.803315 GTGAATATATAGACAAACAGAGTGTCA 57.197 33.333 7.26 0.00 46.44 3.58
124 125 9.803315 TGTGAATATATAGACAAACAGAGTGTC 57.197 33.333 0.00 0.00 44.75 3.67
125 126 9.587772 GTGTGAATATATAGACAAACAGAGTGT 57.412 33.333 7.14 0.00 0.00 3.55
126 127 9.586435 TGTGTGAATATATAGACAAACAGAGTG 57.414 33.333 9.49 0.00 0.00 3.51
142 143 8.783093 CCGGAAACATAATACATGTGTGAATAT 58.217 33.333 9.11 0.00 31.80 1.28
143 144 7.771361 ACCGGAAACATAATACATGTGTGAATA 59.229 33.333 9.46 0.00 31.80 1.75
144 145 6.601613 ACCGGAAACATAATACATGTGTGAAT 59.398 34.615 9.46 0.00 31.80 2.57
145 146 5.941058 ACCGGAAACATAATACATGTGTGAA 59.059 36.000 9.46 0.00 31.80 3.18
146 147 5.492895 ACCGGAAACATAATACATGTGTGA 58.507 37.500 9.46 0.00 31.80 3.58
147 148 5.811399 ACCGGAAACATAATACATGTGTG 57.189 39.130 9.46 4.81 31.80 3.82
148 149 7.925043 TTAACCGGAAACATAATACATGTGT 57.075 32.000 9.46 0.00 31.80 3.72
158 159 9.918630 GCTAGAGTTATATTAACCGGAAACATA 57.081 33.333 9.46 0.00 0.00 2.29
159 160 8.426489 TGCTAGAGTTATATTAACCGGAAACAT 58.574 33.333 9.46 0.00 0.00 2.71
160 161 7.784037 TGCTAGAGTTATATTAACCGGAAACA 58.216 34.615 9.46 0.00 0.00 2.83
161 162 8.709646 CATGCTAGAGTTATATTAACCGGAAAC 58.290 37.037 9.46 0.61 0.00 2.78
162 163 8.644216 TCATGCTAGAGTTATATTAACCGGAAA 58.356 33.333 9.46 1.61 0.00 3.13
163 164 8.185506 TCATGCTAGAGTTATATTAACCGGAA 57.814 34.615 9.46 0.00 0.00 4.30
164 165 7.770366 TCATGCTAGAGTTATATTAACCGGA 57.230 36.000 9.46 0.00 0.00 5.14
240 241 4.982241 TGAAGGAAATATGCCCTAGAGG 57.018 45.455 0.00 0.00 39.47 3.69
241 242 6.238869 GCTTTTGAAGGAAATATGCCCTAGAG 60.239 42.308 0.00 0.00 31.36 2.43
242 243 5.594317 GCTTTTGAAGGAAATATGCCCTAGA 59.406 40.000 0.00 0.00 31.36 2.43
243 244 5.360714 TGCTTTTGAAGGAAATATGCCCTAG 59.639 40.000 0.00 0.00 31.36 3.02
244 245 5.127031 GTGCTTTTGAAGGAAATATGCCCTA 59.873 40.000 0.00 0.00 31.36 3.53
245 246 4.081476 GTGCTTTTGAAGGAAATATGCCCT 60.081 41.667 0.00 0.00 0.00 5.19
246 247 4.183865 GTGCTTTTGAAGGAAATATGCCC 58.816 43.478 0.00 0.00 0.00 5.36
247 248 4.183865 GGTGCTTTTGAAGGAAATATGCC 58.816 43.478 0.00 0.00 0.00 4.40
248 249 3.859386 CGGTGCTTTTGAAGGAAATATGC 59.141 43.478 0.00 0.00 0.00 3.14
249 250 5.309323 TCGGTGCTTTTGAAGGAAATATG 57.691 39.130 0.00 0.00 0.00 1.78
250 251 5.710099 TCTTCGGTGCTTTTGAAGGAAATAT 59.290 36.000 1.81 0.00 39.59 1.28
251 252 5.067273 TCTTCGGTGCTTTTGAAGGAAATA 58.933 37.500 1.81 0.00 39.59 1.40
252 253 3.888930 TCTTCGGTGCTTTTGAAGGAAAT 59.111 39.130 1.81 0.00 39.59 2.17
253 254 3.283751 TCTTCGGTGCTTTTGAAGGAAA 58.716 40.909 1.81 0.00 39.59 3.13
254 255 2.878406 CTCTTCGGTGCTTTTGAAGGAA 59.122 45.455 1.81 0.00 39.59 3.36
255 256 2.494059 CTCTTCGGTGCTTTTGAAGGA 58.506 47.619 1.81 0.00 39.59 3.36
256 257 1.068954 GCTCTTCGGTGCTTTTGAAGG 60.069 52.381 1.81 0.00 39.59 3.46
257 258 1.603802 TGCTCTTCGGTGCTTTTGAAG 59.396 47.619 0.00 0.00 40.30 3.02
258 259 1.674359 TGCTCTTCGGTGCTTTTGAA 58.326 45.000 0.00 0.00 35.70 2.69
259 260 1.674359 TTGCTCTTCGGTGCTTTTGA 58.326 45.000 0.00 0.00 35.70 2.69
260 261 2.712057 ATTGCTCTTCGGTGCTTTTG 57.288 45.000 0.00 0.00 35.70 2.44
261 262 3.733443 AAATTGCTCTTCGGTGCTTTT 57.267 38.095 0.00 0.00 35.70 2.27
262 263 3.733443 AAAATTGCTCTTCGGTGCTTT 57.267 38.095 0.00 0.00 35.70 3.51
305 310 6.112058 GTCTGTTGGAGATGCTCTAAATTCT 58.888 40.000 0.00 0.00 33.06 2.40
316 321 1.811266 CCCGCGTCTGTTGGAGATG 60.811 63.158 4.92 0.00 40.33 2.90
317 322 2.579201 CCCGCGTCTGTTGGAGAT 59.421 61.111 4.92 0.00 31.63 2.75
318 323 4.373116 GCCCGCGTCTGTTGGAGA 62.373 66.667 4.92 0.00 0.00 3.71
319 324 2.890847 CTAGCCCGCGTCTGTTGGAG 62.891 65.000 4.92 0.00 0.00 3.86
320 325 2.992689 TAGCCCGCGTCTGTTGGA 60.993 61.111 4.92 0.00 0.00 3.53
321 326 2.509336 CTAGCCCGCGTCTGTTGG 60.509 66.667 4.92 0.00 0.00 3.77
322 327 3.188786 GCTAGCCCGCGTCTGTTG 61.189 66.667 2.29 0.00 0.00 3.33
352 357 6.183360 CGCTATTTCGGGGTTGTATACTTTTT 60.183 38.462 4.17 0.00 0.00 1.94
353 358 5.295045 CGCTATTTCGGGGTTGTATACTTTT 59.705 40.000 4.17 0.00 0.00 2.27
354 359 4.812626 CGCTATTTCGGGGTTGTATACTTT 59.187 41.667 4.17 0.00 0.00 2.66
355 360 4.374399 CGCTATTTCGGGGTTGTATACTT 58.626 43.478 4.17 0.00 0.00 2.24
356 361 3.801293 GCGCTATTTCGGGGTTGTATACT 60.801 47.826 0.00 0.00 0.00 2.12
357 362 2.477754 GCGCTATTTCGGGGTTGTATAC 59.522 50.000 0.00 0.00 0.00 1.47
358 363 2.366266 AGCGCTATTTCGGGGTTGTATA 59.634 45.455 8.99 0.00 0.00 1.47
359 364 1.140252 AGCGCTATTTCGGGGTTGTAT 59.860 47.619 8.99 0.00 0.00 2.29
360 365 0.538118 AGCGCTATTTCGGGGTTGTA 59.462 50.000 8.99 0.00 0.00 2.41
361 366 0.322187 AAGCGCTATTTCGGGGTTGT 60.322 50.000 12.05 0.00 36.41 3.32
362 367 0.808755 AAAGCGCTATTTCGGGGTTG 59.191 50.000 12.05 0.00 37.57 3.77
363 368 1.201414 CAAAAGCGCTATTTCGGGGTT 59.799 47.619 12.05 0.00 38.88 4.11
364 369 0.808755 CAAAAGCGCTATTTCGGGGT 59.191 50.000 12.05 0.00 0.00 4.95
365 370 0.525455 GCAAAAGCGCTATTTCGGGG 60.525 55.000 12.05 3.41 0.00 5.73
366 371 0.861450 CGCAAAAGCGCTATTTCGGG 60.861 55.000 12.05 12.02 0.00 5.14
367 372 2.554656 CGCAAAAGCGCTATTTCGG 58.445 52.632 12.05 4.42 0.00 4.30
381 386 4.683721 TAAACCTCCCGCGCGCAA 62.684 61.111 32.61 14.83 0.00 4.85
384 389 4.745751 TGGTAAACCTCCCGCGCG 62.746 66.667 25.67 25.67 36.82 6.86
385 390 2.818274 CTGGTAAACCTCCCGCGC 60.818 66.667 0.00 0.00 36.82 6.86
386 391 1.447314 GTCTGGTAAACCTCCCGCG 60.447 63.158 0.00 0.00 36.82 6.46
387 392 1.447314 CGTCTGGTAAACCTCCCGC 60.447 63.158 0.02 0.00 36.82 6.13
388 393 1.447314 GCGTCTGGTAAACCTCCCG 60.447 63.158 0.02 1.26 36.82 5.14
389 394 0.672711 GTGCGTCTGGTAAACCTCCC 60.673 60.000 0.02 0.00 36.82 4.30
390 395 0.034337 TGTGCGTCTGGTAAACCTCC 59.966 55.000 0.02 0.00 36.82 4.30
391 396 1.873698 TTGTGCGTCTGGTAAACCTC 58.126 50.000 0.02 0.00 36.82 3.85
392 397 2.335316 TTTGTGCGTCTGGTAAACCT 57.665 45.000 0.02 0.00 36.82 3.50
393 398 2.542205 GGTTTTGTGCGTCTGGTAAACC 60.542 50.000 0.00 0.00 38.15 3.27
394 399 2.097791 TGGTTTTGTGCGTCTGGTAAAC 59.902 45.455 0.00 0.00 0.00 2.01
395 400 2.097791 GTGGTTTTGTGCGTCTGGTAAA 59.902 45.455 0.00 0.00 0.00 2.01
396 401 1.671845 GTGGTTTTGTGCGTCTGGTAA 59.328 47.619 0.00 0.00 0.00 2.85
397 402 1.301423 GTGGTTTTGTGCGTCTGGTA 58.699 50.000 0.00 0.00 0.00 3.25
398 403 0.678366 TGTGGTTTTGTGCGTCTGGT 60.678 50.000 0.00 0.00 0.00 4.00
399 404 0.029300 CTGTGGTTTTGTGCGTCTGG 59.971 55.000 0.00 0.00 0.00 3.86
400 405 0.592247 GCTGTGGTTTTGTGCGTCTG 60.592 55.000 0.00 0.00 0.00 3.51
401 406 1.727467 GCTGTGGTTTTGTGCGTCT 59.273 52.632 0.00 0.00 0.00 4.18
402 407 1.654137 CGCTGTGGTTTTGTGCGTC 60.654 57.895 0.00 0.00 41.45 5.19
403 408 2.407210 CGCTGTGGTTTTGTGCGT 59.593 55.556 0.00 0.00 41.45 5.24
405 410 2.658268 GGCGCTGTGGTTTTGTGC 60.658 61.111 7.64 0.00 36.59 4.57
406 411 2.027460 GGGCGCTGTGGTTTTGTG 59.973 61.111 7.64 0.00 0.00 3.33
407 412 2.055042 TTGGGCGCTGTGGTTTTGT 61.055 52.632 7.64 0.00 0.00 2.83
408 413 1.591327 GTTGGGCGCTGTGGTTTTG 60.591 57.895 7.64 0.00 0.00 2.44
409 414 2.791868 GGTTGGGCGCTGTGGTTTT 61.792 57.895 7.64 0.00 0.00 2.43
410 415 3.223589 GGTTGGGCGCTGTGGTTT 61.224 61.111 7.64 0.00 0.00 3.27
411 416 4.204028 AGGTTGGGCGCTGTGGTT 62.204 61.111 7.64 0.00 0.00 3.67
412 417 4.954970 CAGGTTGGGCGCTGTGGT 62.955 66.667 7.64 0.00 0.00 4.16
423 428 4.263572 TGTGGGTCCGCCAGGTTG 62.264 66.667 0.00 0.00 39.05 3.77
424 429 4.265056 GTGTGGGTCCGCCAGGTT 62.265 66.667 0.00 0.00 39.05 3.50
463 468 2.278182 CTACAAATTTGGGGCGCCGG 62.278 60.000 22.54 0.00 0.00 6.13
464 469 1.138671 CTACAAATTTGGGGCGCCG 59.861 57.895 22.54 6.21 0.00 6.46
465 470 1.153647 GCTACAAATTTGGGGCGCC 60.154 57.895 21.18 21.18 0.00 6.53
466 471 1.099689 TAGCTACAAATTTGGGGCGC 58.900 50.000 21.74 16.36 35.83 6.53
467 472 1.063469 CGTAGCTACAAATTTGGGGCG 59.937 52.381 23.21 12.57 35.83 6.13
468 473 2.844122 CGTAGCTACAAATTTGGGGC 57.156 50.000 23.21 21.78 0.00 5.80
488 493 1.922135 AATTTAGTGCACGCGGGCAG 61.922 55.000 40.05 11.37 45.96 4.85
489 494 1.519751 AAATTTAGTGCACGCGGGCA 61.520 50.000 35.74 35.74 42.53 5.36
490 495 1.070471 CAAATTTAGTGCACGCGGGC 61.070 55.000 29.97 29.97 0.00 6.13
491 496 1.070471 GCAAATTTAGTGCACGCGGG 61.070 55.000 12.47 7.92 41.80 6.13
492 497 0.386605 TGCAAATTTAGTGCACGCGG 60.387 50.000 12.47 0.00 46.76 6.46
493 498 0.976963 CTGCAAATTTAGTGCACGCG 59.023 50.000 12.01 3.53 46.76 6.01
494 499 0.710017 GCTGCAAATTTAGTGCACGC 59.290 50.000 12.01 7.46 46.76 5.34
495 500 2.336554 AGCTGCAAATTTAGTGCACG 57.663 45.000 12.01 0.00 46.76 5.34
496 501 2.658325 CGAAGCTGCAAATTTAGTGCAC 59.342 45.455 9.40 9.40 46.76 4.57
498 503 2.933769 ACGAAGCTGCAAATTTAGTGC 58.066 42.857 1.02 0.00 42.55 4.40
499 504 5.888412 AAAACGAAGCTGCAAATTTAGTG 57.112 34.783 1.02 0.00 0.00 2.74
500 505 5.810074 ACAAAAACGAAGCTGCAAATTTAGT 59.190 32.000 1.02 0.00 0.00 2.24
501 506 6.122125 CACAAAAACGAAGCTGCAAATTTAG 58.878 36.000 1.02 0.00 0.00 1.85
502 507 5.501574 GCACAAAAACGAAGCTGCAAATTTA 60.502 36.000 1.02 0.00 0.00 1.40
503 508 4.727448 GCACAAAAACGAAGCTGCAAATTT 60.727 37.500 1.02 0.00 0.00 1.82
504 509 3.242381 GCACAAAAACGAAGCTGCAAATT 60.242 39.130 1.02 0.00 0.00 1.82
505 510 2.284952 GCACAAAAACGAAGCTGCAAAT 59.715 40.909 1.02 0.00 0.00 2.32
506 511 1.658095 GCACAAAAACGAAGCTGCAAA 59.342 42.857 1.02 0.00 0.00 3.68
507 512 1.276415 GCACAAAAACGAAGCTGCAA 58.724 45.000 1.02 0.00 0.00 4.08
508 513 0.865218 CGCACAAAAACGAAGCTGCA 60.865 50.000 1.02 0.00 0.00 4.41
509 514 0.865639 ACGCACAAAAACGAAGCTGC 60.866 50.000 0.00 0.00 0.00 5.25
510 515 0.839477 CACGCACAAAAACGAAGCTG 59.161 50.000 0.00 0.00 0.00 4.24
511 516 0.865639 GCACGCACAAAAACGAAGCT 60.866 50.000 0.00 0.00 33.49 3.74
512 517 0.865639 AGCACGCACAAAAACGAAGC 60.866 50.000 0.00 0.00 35.34 3.86
513 518 1.544686 AAGCACGCACAAAAACGAAG 58.455 45.000 0.00 0.00 0.00 3.79
514 519 1.983972 AAAGCACGCACAAAAACGAA 58.016 40.000 0.00 0.00 0.00 3.85
515 520 2.826979 TAAAGCACGCACAAAAACGA 57.173 40.000 0.00 0.00 0.00 3.85
516 521 4.430407 AAATAAAGCACGCACAAAAACG 57.570 36.364 0.00 0.00 0.00 3.60
517 522 6.697152 TGTAAAATAAAGCACGCACAAAAAC 58.303 32.000 0.00 0.00 0.00 2.43
518 523 6.508721 GCTGTAAAATAAAGCACGCACAAAAA 60.509 34.615 0.00 0.00 36.91 1.94
519 524 5.051374 GCTGTAAAATAAAGCACGCACAAAA 60.051 36.000 0.00 0.00 36.91 2.44
520 525 4.442733 GCTGTAAAATAAAGCACGCACAAA 59.557 37.500 0.00 0.00 36.91 2.83
521 526 3.978217 GCTGTAAAATAAAGCACGCACAA 59.022 39.130 0.00 0.00 36.91 3.33
522 527 3.252215 AGCTGTAAAATAAAGCACGCACA 59.748 39.130 2.62 0.00 39.47 4.57
523 528 3.821841 AGCTGTAAAATAAAGCACGCAC 58.178 40.909 2.62 0.00 39.47 5.34
524 529 4.215399 AGAAGCTGTAAAATAAAGCACGCA 59.785 37.500 2.62 0.00 39.47 5.24
525 530 4.554973 CAGAAGCTGTAAAATAAAGCACGC 59.445 41.667 2.62 0.00 39.47 5.34
526 531 4.554973 GCAGAAGCTGTAAAATAAAGCACG 59.445 41.667 2.62 0.00 39.47 5.34
527 532 5.999483 GCAGAAGCTGTAAAATAAAGCAC 57.001 39.130 2.62 0.00 39.47 4.40
544 549 7.537306 GTGATTAAAAATAACGCTTCAGCAGAA 59.463 33.333 0.00 0.00 42.21 3.02
545 550 7.021196 GTGATTAAAAATAACGCTTCAGCAGA 58.979 34.615 0.00 0.00 42.21 4.26
546 551 6.022251 CGTGATTAAAAATAACGCTTCAGCAG 60.022 38.462 0.00 0.00 42.21 4.24
547 552 5.792962 CGTGATTAAAAATAACGCTTCAGCA 59.207 36.000 0.00 0.00 42.21 4.41
548 553 6.230460 CGTGATTAAAAATAACGCTTCAGC 57.770 37.500 0.00 0.00 37.78 4.26
555 560 3.063667 CGCGTGCGTGATTAAAAATAACG 60.064 43.478 6.00 5.36 37.32 3.18
556 561 3.300066 GCGCGTGCGTGATTAAAAATAAC 60.300 43.478 16.27 0.00 42.09 1.89
557 562 2.841329 GCGCGTGCGTGATTAAAAATAA 59.159 40.909 16.27 0.00 42.09 1.40
558 563 2.432856 GCGCGTGCGTGATTAAAAATA 58.567 42.857 16.27 0.00 42.09 1.40
559 564 1.255767 GCGCGTGCGTGATTAAAAAT 58.744 45.000 16.27 0.00 42.09 1.82
560 565 2.702331 GCGCGTGCGTGATTAAAAA 58.298 47.368 16.27 0.00 42.09 1.94
561 566 4.426029 GCGCGTGCGTGATTAAAA 57.574 50.000 16.27 0.00 42.09 1.52
570 575 8.540849 GAAAAAGATTTCTATATAGCGCGTGCG 61.541 40.741 16.39 10.36 42.95 5.34
571 576 5.517037 AAAGATTTCTATATAGCGCGTGC 57.483 39.130 14.39 14.39 43.24 5.34
572 577 7.564128 TGAAAAAGATTTCTATATAGCGCGTG 58.436 34.615 8.43 0.00 44.32 5.34
573 578 7.569591 GCTGAAAAAGATTTCTATATAGCGCGT 60.570 37.037 8.43 0.00 44.32 6.01
574 579 6.734171 GCTGAAAAAGATTTCTATATAGCGCG 59.266 38.462 0.00 0.00 44.32 6.86
575 580 7.532209 GTGCTGAAAAAGATTTCTATATAGCGC 59.468 37.037 0.00 0.00 44.32 5.92
576 581 7.737744 CGTGCTGAAAAAGATTTCTATATAGCG 59.262 37.037 4.75 0.00 44.32 4.26
577 582 7.532209 GCGTGCTGAAAAAGATTTCTATATAGC 59.468 37.037 4.75 0.00 44.32 2.97
578 583 7.737744 CGCGTGCTGAAAAAGATTTCTATATAG 59.262 37.037 3.10 3.10 44.32 1.31
579 584 7.564128 CGCGTGCTGAAAAAGATTTCTATATA 58.436 34.615 0.00 0.00 44.32 0.86
580 585 6.422223 CGCGTGCTGAAAAAGATTTCTATAT 58.578 36.000 0.00 0.00 44.32 0.86
581 586 5.726688 GCGCGTGCTGAAAAAGATTTCTATA 60.727 40.000 15.02 0.00 44.32 1.31
582 587 4.651994 CGCGTGCTGAAAAAGATTTCTAT 58.348 39.130 0.00 0.00 44.32 1.98
583 588 3.666902 GCGCGTGCTGAAAAAGATTTCTA 60.667 43.478 15.02 0.00 44.32 2.10
584 589 2.918131 GCGCGTGCTGAAAAAGATTTCT 60.918 45.455 15.02 0.00 44.32 2.52
585 590 1.383412 GCGCGTGCTGAAAAAGATTTC 59.617 47.619 15.02 0.00 44.27 2.17
586 591 1.408422 GCGCGTGCTGAAAAAGATTT 58.592 45.000 15.02 0.00 38.39 2.17
587 592 0.387239 GGCGCGTGCTGAAAAAGATT 60.387 50.000 21.89 0.00 42.25 2.40
588 593 1.210155 GGCGCGTGCTGAAAAAGAT 59.790 52.632 21.89 0.00 42.25 2.40
589 594 1.444119 AAGGCGCGTGCTGAAAAAGA 61.444 50.000 21.89 0.00 42.25 2.52
590 595 0.237235 TAAGGCGCGTGCTGAAAAAG 59.763 50.000 21.89 0.00 42.25 2.27
591 596 0.878416 ATAAGGCGCGTGCTGAAAAA 59.122 45.000 21.89 1.26 42.25 1.94
592 597 0.167908 CATAAGGCGCGTGCTGAAAA 59.832 50.000 21.89 2.74 42.25 2.29
593 598 0.953471 ACATAAGGCGCGTGCTGAAA 60.953 50.000 21.89 4.61 42.25 2.69
594 599 0.108567 TACATAAGGCGCGTGCTGAA 60.109 50.000 21.89 6.52 42.25 3.02
595 600 0.527600 CTACATAAGGCGCGTGCTGA 60.528 55.000 21.89 6.68 42.25 4.26
596 601 1.927210 CTACATAAGGCGCGTGCTG 59.073 57.895 21.89 13.54 42.25 4.41
597 602 1.883084 GCTACATAAGGCGCGTGCT 60.883 57.895 21.89 4.17 42.25 4.40
598 603 2.626455 GCTACATAAGGCGCGTGC 59.374 61.111 13.78 13.78 41.71 5.34
599 604 2.920869 CGCTACATAAGGCGCGTG 59.079 61.111 8.43 0.00 44.64 5.34
604 609 0.527817 ACAGACGCGCTACATAAGGC 60.528 55.000 5.73 0.00 0.00 4.35
605 610 1.588404 CAACAGACGCGCTACATAAGG 59.412 52.381 5.73 0.00 0.00 2.69
606 611 1.588404 CCAACAGACGCGCTACATAAG 59.412 52.381 5.73 0.00 0.00 1.73
607 612 1.202817 TCCAACAGACGCGCTACATAA 59.797 47.619 5.73 0.00 0.00 1.90
608 613 0.812549 TCCAACAGACGCGCTACATA 59.187 50.000 5.73 0.00 0.00 2.29
609 614 0.458543 CTCCAACAGACGCGCTACAT 60.459 55.000 5.73 0.00 0.00 2.29
610 615 1.080772 CTCCAACAGACGCGCTACA 60.081 57.895 5.73 0.00 0.00 2.74
611 616 0.179134 ATCTCCAACAGACGCGCTAC 60.179 55.000 5.73 0.00 32.26 3.58
612 617 0.179137 CATCTCCAACAGACGCGCTA 60.179 55.000 5.73 0.00 32.26 4.26
613 618 1.446792 CATCTCCAACAGACGCGCT 60.447 57.895 5.73 0.50 32.26 5.92
614 619 3.084579 CATCTCCAACAGACGCGC 58.915 61.111 5.73 0.00 32.26 6.86
615 620 1.416813 GAGCATCTCCAACAGACGCG 61.417 60.000 3.53 3.53 45.48 6.01
616 621 2.378028 GAGCATCTCCAACAGACGC 58.622 57.895 0.00 0.00 40.90 5.19
631 636 3.368571 GCACCACCTGCCAAGAGC 61.369 66.667 0.00 0.00 40.42 4.09
641 646 0.675522 TTAGCGCTTAAGGCACCACC 60.676 55.000 18.68 0.00 41.91 4.61
646 651 6.459573 CCAATTTCTATTTAGCGCTTAAGGCA 60.460 38.462 18.68 1.21 41.91 4.75
723 728 1.812571 CGATGGGGTTATATGCAAGGC 59.187 52.381 0.00 0.00 0.00 4.35
738 743 4.838152 CGGACTGGCCCACGATGG 62.838 72.222 0.00 0.00 37.25 3.51
762 767 2.502510 GGAAATGCAGCACGCGTG 60.503 61.111 34.01 34.01 46.97 5.34
770 775 0.443869 CGGAGAACGTGGAAATGCAG 59.556 55.000 0.00 0.00 37.93 4.41
841 846 2.424842 GAATCCCACCACCAGCACCA 62.425 60.000 0.00 0.00 0.00 4.17
938 943 1.001517 TAATGGCTGGCGCAAGGAA 60.002 52.632 15.05 0.00 38.10 3.36
949 954 0.676782 GCGGTGGTGAAGTAATGGCT 60.677 55.000 0.00 0.00 0.00 4.75
1867 1879 4.442073 CACTGACAACAGCTGCAAATAAAC 59.558 41.667 15.27 0.00 46.95 2.01
1878 1890 0.886490 CTCACCCCACTGACAACAGC 60.886 60.000 0.00 0.00 46.95 4.40
2030 2045 5.632034 ATATTTTGGGACAGAGGGAGTAC 57.368 43.478 0.00 0.00 42.39 2.73
2031 2046 7.136885 TCTTATATTTTGGGACAGAGGGAGTA 58.863 38.462 0.00 0.00 42.39 2.59
2032 2047 5.970640 TCTTATATTTTGGGACAGAGGGAGT 59.029 40.000 0.00 0.00 42.39 3.85
2033 2048 6.500589 TCTTATATTTTGGGACAGAGGGAG 57.499 41.667 0.00 0.00 42.39 4.30
2034 2049 6.631766 CGTTCTTATATTTTGGGACAGAGGGA 60.632 42.308 0.00 0.00 42.39 4.20
2035 2050 5.527582 CGTTCTTATATTTTGGGACAGAGGG 59.472 44.000 0.00 0.00 42.39 4.30
2036 2051 6.113411 ACGTTCTTATATTTTGGGACAGAGG 58.887 40.000 0.00 0.00 42.39 3.69
2037 2052 7.611213 AACGTTCTTATATTTTGGGACAGAG 57.389 36.000 0.00 0.00 42.39 3.35
2038 2053 7.989416 AAACGTTCTTATATTTTGGGACAGA 57.011 32.000 0.00 0.00 42.39 3.41
2039 2054 8.911662 CAAAAACGTTCTTATATTTTGGGACAG 58.088 33.333 0.00 0.00 42.39 3.51
2040 2055 8.630917 TCAAAAACGTTCTTATATTTTGGGACA 58.369 29.630 15.53 0.00 39.94 4.02
2041 2056 8.908678 GTCAAAAACGTTCTTATATTTTGGGAC 58.091 33.333 15.53 7.20 39.94 4.46
2042 2057 8.630917 TGTCAAAAACGTTCTTATATTTTGGGA 58.369 29.630 15.53 4.35 39.94 4.37
2043 2058 8.696175 GTGTCAAAAACGTTCTTATATTTTGGG 58.304 33.333 15.53 0.00 39.94 4.12
2044 2059 9.458374 AGTGTCAAAAACGTTCTTATATTTTGG 57.542 29.630 15.53 0.00 39.94 3.28
2052 2067 9.701098 ACTATCATAGTGTCAAAAACGTTCTTA 57.299 29.630 0.00 0.00 37.69 2.10
2053 2068 8.603242 ACTATCATAGTGTCAAAAACGTTCTT 57.397 30.769 0.00 0.00 37.69 2.52
2054 2069 9.871238 ATACTATCATAGTGTCAAAAACGTTCT 57.129 29.630 7.66 0.00 39.81 3.01
2066 2081 9.871238 AGAACGTTTTTGATACTATCATAGTGT 57.129 29.630 7.66 0.00 39.81 3.55
2079 2094 9.634163 GTCCCAAAATATAAGAACGTTTTTGAT 57.366 29.630 13.87 4.93 38.79 2.57
2080 2095 8.630917 TGTCCCAAAATATAAGAACGTTTTTGA 58.369 29.630 13.87 2.81 38.79 2.69
2081 2096 8.804688 TGTCCCAAAATATAAGAACGTTTTTG 57.195 30.769 13.87 12.16 37.14 2.44
2082 2097 8.852135 TCTGTCCCAAAATATAAGAACGTTTTT 58.148 29.630 9.22 9.22 0.00 1.94
2083 2098 8.398878 TCTGTCCCAAAATATAAGAACGTTTT 57.601 30.769 0.46 0.00 0.00 2.43
2084 2099 7.120726 CCTCTGTCCCAAAATATAAGAACGTTT 59.879 37.037 0.46 0.00 0.00 3.60
2085 2100 6.598064 CCTCTGTCCCAAAATATAAGAACGTT 59.402 38.462 0.00 0.00 0.00 3.99
2086 2101 6.113411 CCTCTGTCCCAAAATATAAGAACGT 58.887 40.000 0.00 0.00 0.00 3.99
2087 2102 5.527582 CCCTCTGTCCCAAAATATAAGAACG 59.472 44.000 0.00 0.00 0.00 3.95
2088 2103 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
2089 2104 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
2090 2105 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
2091 2106 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
2092 2107 6.906901 ACTACTCCCTCTGTCCCAAAATATAA 59.093 38.462 0.00 0.00 0.00 0.98
2093 2108 6.449956 ACTACTCCCTCTGTCCCAAAATATA 58.550 40.000 0.00 0.00 0.00 0.86
2094 2109 5.289510 ACTACTCCCTCTGTCCCAAAATAT 58.710 41.667 0.00 0.00 0.00 1.28
2095 2110 4.695606 ACTACTCCCTCTGTCCCAAAATA 58.304 43.478 0.00 0.00 0.00 1.40
2096 2111 3.532102 ACTACTCCCTCTGTCCCAAAAT 58.468 45.455 0.00 0.00 0.00 1.82
2097 2112 2.986050 ACTACTCCCTCTGTCCCAAAA 58.014 47.619 0.00 0.00 0.00 2.44
2098 2113 2.715763 ACTACTCCCTCTGTCCCAAA 57.284 50.000 0.00 0.00 0.00 3.28
2099 2114 2.158219 TGAACTACTCCCTCTGTCCCAA 60.158 50.000 0.00 0.00 0.00 4.12
2100 2115 1.431633 TGAACTACTCCCTCTGTCCCA 59.568 52.381 0.00 0.00 0.00 4.37
2101 2116 1.826096 GTGAACTACTCCCTCTGTCCC 59.174 57.143 0.00 0.00 0.00 4.46
2102 2117 2.810164 AGTGAACTACTCCCTCTGTCC 58.190 52.381 0.00 0.00 33.17 4.02
2103 2118 3.574826 ACAAGTGAACTACTCCCTCTGTC 59.425 47.826 0.00 0.00 39.18 3.51
2104 2119 3.577919 ACAAGTGAACTACTCCCTCTGT 58.422 45.455 0.00 0.00 39.18 3.41
2105 2120 4.767928 ACTACAAGTGAACTACTCCCTCTG 59.232 45.833 0.00 0.00 39.18 3.35
2106 2121 5.000570 ACTACAAGTGAACTACTCCCTCT 57.999 43.478 0.00 0.00 39.18 3.69
2107 2122 5.725325 AACTACAAGTGAACTACTCCCTC 57.275 43.478 0.00 0.00 39.18 4.30
2108 2123 6.210984 CCTAAACTACAAGTGAACTACTCCCT 59.789 42.308 0.00 0.00 39.18 4.20
2109 2124 6.210185 TCCTAAACTACAAGTGAACTACTCCC 59.790 42.308 0.00 0.00 39.18 4.30
2110 2125 7.224522 TCCTAAACTACAAGTGAACTACTCC 57.775 40.000 0.00 0.00 39.18 3.85
2111 2126 8.305317 ACATCCTAAACTACAAGTGAACTACTC 58.695 37.037 0.00 0.00 39.18 2.59
2112 2127 8.191534 ACATCCTAAACTACAAGTGAACTACT 57.808 34.615 0.00 0.00 42.89 2.57
2171 2186 5.303971 GGATTATGTGCTAGACTTGCTGAT 58.696 41.667 10.25 4.83 0.00 2.90
2181 2196 4.392047 TCATGCAAGGGATTATGTGCTAG 58.608 43.478 0.00 0.00 37.87 3.42
2182 2197 4.436113 TCATGCAAGGGATTATGTGCTA 57.564 40.909 0.00 0.00 37.87 3.49
2183 2198 3.301794 TCATGCAAGGGATTATGTGCT 57.698 42.857 0.00 0.00 37.87 4.40
2184 2199 4.365723 CTTTCATGCAAGGGATTATGTGC 58.634 43.478 0.00 0.00 37.51 4.57
2185 2200 4.403432 ACCTTTCATGCAAGGGATTATGTG 59.597 41.667 25.19 0.67 46.98 3.21
2186 2201 4.613437 ACCTTTCATGCAAGGGATTATGT 58.387 39.130 25.19 2.56 46.98 2.29
2187 2202 5.353938 CAACCTTTCATGCAAGGGATTATG 58.646 41.667 25.19 13.13 46.98 1.90
2188 2203 4.141869 GCAACCTTTCATGCAAGGGATTAT 60.142 41.667 25.19 3.94 46.98 1.28
2189 2204 3.195396 GCAACCTTTCATGCAAGGGATTA 59.805 43.478 25.19 0.00 46.98 1.75
2190 2205 2.027837 GCAACCTTTCATGCAAGGGATT 60.028 45.455 25.19 10.89 46.98 3.01
2191 2206 1.551883 GCAACCTTTCATGCAAGGGAT 59.448 47.619 25.19 12.79 46.98 3.85
2192 2207 0.968405 GCAACCTTTCATGCAAGGGA 59.032 50.000 25.19 0.00 46.98 4.20
2193 2208 0.971386 AGCAACCTTTCATGCAAGGG 59.029 50.000 25.19 14.58 46.98 3.95
2195 2210 3.243636 ACTTCAGCAACCTTTCATGCAAG 60.244 43.478 0.00 0.00 44.95 4.01
2196 2211 2.694628 ACTTCAGCAACCTTTCATGCAA 59.305 40.909 0.00 0.00 44.95 4.08
2197 2212 2.034939 CACTTCAGCAACCTTTCATGCA 59.965 45.455 0.00 0.00 44.95 3.96
2198 2213 2.294233 TCACTTCAGCAACCTTTCATGC 59.706 45.455 0.00 0.00 42.87 4.06
2199 2214 4.778534 ATCACTTCAGCAACCTTTCATG 57.221 40.909 0.00 0.00 0.00 3.07
2200 2215 6.899393 TTTATCACTTCAGCAACCTTTCAT 57.101 33.333 0.00 0.00 0.00 2.57
2201 2216 6.707440 TTTTATCACTTCAGCAACCTTTCA 57.293 33.333 0.00 0.00 0.00 2.69
2202 2217 9.691362 TTATTTTTATCACTTCAGCAACCTTTC 57.309 29.630 0.00 0.00 0.00 2.62
2203 2218 9.696917 CTTATTTTTATCACTTCAGCAACCTTT 57.303 29.630 0.00 0.00 0.00 3.11
2204 2219 8.306761 CCTTATTTTTATCACTTCAGCAACCTT 58.693 33.333 0.00 0.00 0.00 3.50
2205 2220 7.669722 TCCTTATTTTTATCACTTCAGCAACCT 59.330 33.333 0.00 0.00 0.00 3.50
2206 2221 7.826690 TCCTTATTTTTATCACTTCAGCAACC 58.173 34.615 0.00 0.00 0.00 3.77
2207 2222 9.294030 CATCCTTATTTTTATCACTTCAGCAAC 57.706 33.333 0.00 0.00 0.00 4.17
2208 2223 7.975616 GCATCCTTATTTTTATCACTTCAGCAA 59.024 33.333 0.00 0.00 0.00 3.91
2209 2224 7.340232 AGCATCCTTATTTTTATCACTTCAGCA 59.660 33.333 0.00 0.00 0.00 4.41
2210 2225 7.710896 AGCATCCTTATTTTTATCACTTCAGC 58.289 34.615 0.00 0.00 0.00 4.26
2211 2226 8.896744 TGAGCATCCTTATTTTTATCACTTCAG 58.103 33.333 0.00 0.00 0.00 3.02
2212 2227 8.806429 TGAGCATCCTTATTTTTATCACTTCA 57.194 30.769 0.00 0.00 0.00 3.02
2213 2228 9.890352 GATGAGCATCCTTATTTTTATCACTTC 57.110 33.333 0.00 0.00 31.76 3.01
2214 2229 9.412460 TGATGAGCATCCTTATTTTTATCACTT 57.588 29.630 7.92 0.00 37.02 3.16
2215 2230 8.844244 GTGATGAGCATCCTTATTTTTATCACT 58.156 33.333 7.92 0.00 38.26 3.41
2216 2231 8.844244 AGTGATGAGCATCCTTATTTTTATCAC 58.156 33.333 7.92 0.00 40.34 3.06
2217 2232 8.985315 AGTGATGAGCATCCTTATTTTTATCA 57.015 30.769 7.92 0.00 37.02 2.15
2220 2235 9.905713 AGTAAGTGATGAGCATCCTTATTTTTA 57.094 29.630 16.87 2.59 35.31 1.52
2221 2236 8.814038 AGTAAGTGATGAGCATCCTTATTTTT 57.186 30.769 16.87 7.59 35.31 1.94
2222 2237 8.049117 TGAGTAAGTGATGAGCATCCTTATTTT 58.951 33.333 16.87 10.50 35.31 1.82
2223 2238 7.568349 TGAGTAAGTGATGAGCATCCTTATTT 58.432 34.615 16.87 11.96 35.31 1.40
2224 2239 7.129457 TGAGTAAGTGATGAGCATCCTTATT 57.871 36.000 16.87 14.53 35.31 1.40
2225 2240 6.737720 TGAGTAAGTGATGAGCATCCTTAT 57.262 37.500 16.87 10.57 35.31 1.73
2226 2241 6.737720 ATGAGTAAGTGATGAGCATCCTTA 57.262 37.500 7.92 11.01 37.02 2.69
2227 2242 5.627182 ATGAGTAAGTGATGAGCATCCTT 57.373 39.130 7.92 11.81 37.02 3.36
2228 2243 5.627182 AATGAGTAAGTGATGAGCATCCT 57.373 39.130 7.92 2.58 37.02 3.24
2229 2244 6.541641 AGAAAATGAGTAAGTGATGAGCATCC 59.458 38.462 7.92 0.46 37.02 3.51
2230 2245 7.551035 AGAAAATGAGTAAGTGATGAGCATC 57.449 36.000 3.55 3.55 38.29 3.91
2231 2246 7.609146 TGAAGAAAATGAGTAAGTGATGAGCAT 59.391 33.333 0.00 0.00 0.00 3.79
2232 2247 6.936335 TGAAGAAAATGAGTAAGTGATGAGCA 59.064 34.615 0.00 0.00 0.00 4.26
2233 2248 7.118971 AGTGAAGAAAATGAGTAAGTGATGAGC 59.881 37.037 0.00 0.00 0.00 4.26
2234 2249 8.545229 AGTGAAGAAAATGAGTAAGTGATGAG 57.455 34.615 0.00 0.00 0.00 2.90
2235 2250 8.370940 AGAGTGAAGAAAATGAGTAAGTGATGA 58.629 33.333 0.00 0.00 0.00 2.92
2236 2251 8.545229 AGAGTGAAGAAAATGAGTAAGTGATG 57.455 34.615 0.00 0.00 0.00 3.07
2237 2252 9.566432 AAAGAGTGAAGAAAATGAGTAAGTGAT 57.434 29.630 0.00 0.00 0.00 3.06
2238 2253 8.964476 AAAGAGTGAAGAAAATGAGTAAGTGA 57.036 30.769 0.00 0.00 0.00 3.41
2239 2254 8.286097 GGAAAGAGTGAAGAAAATGAGTAAGTG 58.714 37.037 0.00 0.00 0.00 3.16
2240 2255 8.214364 AGGAAAGAGTGAAGAAAATGAGTAAGT 58.786 33.333 0.00 0.00 0.00 2.24
2241 2256 8.502387 CAGGAAAGAGTGAAGAAAATGAGTAAG 58.498 37.037 0.00 0.00 0.00 2.34
2242 2257 7.041098 GCAGGAAAGAGTGAAGAAAATGAGTAA 60.041 37.037 0.00 0.00 0.00 2.24
2243 2258 6.428159 GCAGGAAAGAGTGAAGAAAATGAGTA 59.572 38.462 0.00 0.00 0.00 2.59
2244 2259 5.240403 GCAGGAAAGAGTGAAGAAAATGAGT 59.760 40.000 0.00 0.00 0.00 3.41
2245 2260 5.240183 TGCAGGAAAGAGTGAAGAAAATGAG 59.760 40.000 0.00 0.00 0.00 2.90
2246 2261 5.132502 TGCAGGAAAGAGTGAAGAAAATGA 58.867 37.500 0.00 0.00 0.00 2.57
2273 2354 9.950680 CAAAATACACAAGTGAATCAACTAAGT 57.049 29.630 7.28 0.00 0.00 2.24
2348 2554 6.363882 TGCAAATGTAATGGACTGGATATGA 58.636 36.000 0.00 0.00 0.00 2.15
2404 2610 6.306987 AGTGAAAGAAAGTGGGTATGTGATT 58.693 36.000 0.00 0.00 0.00 2.57
2536 2776 2.282391 GGTCATGCCACAGGTGCA 60.282 61.111 1.78 0.00 43.97 4.57
2589 2829 4.032900 CAGATTGTTGGAATAGTTCGTCCG 59.967 45.833 0.00 0.00 36.65 4.79
2603 2843 1.901591 ACAGCCAGGACAGATTGTTG 58.098 50.000 0.00 0.00 0.00 3.33
2703 2943 1.071699 AGACGTTAACACAGTGCCCAT 59.928 47.619 6.39 0.00 0.00 4.00
2762 3002 9.628746 TCACTTGTGTATGATTTCATTGAAATG 57.371 29.630 25.33 12.24 41.56 2.32
2792 3033 9.341899 CACCAATATGCTTTAACTTTTACTGTC 57.658 33.333 0.00 0.00 0.00 3.51
2909 3150 9.450807 CAAACTGATTGGTAAGAGTTAAAAGTG 57.549 33.333 0.00 0.00 35.27 3.16
2967 3209 0.106268 TTGCCCAGTTGAGCAAGGAA 60.106 50.000 0.00 0.00 43.74 3.36
3097 3339 3.634448 CCTATCTGAGTGTTCTCCATCGT 59.366 47.826 0.00 0.00 39.75 3.73
3287 3529 8.626917 TCCTTTGGTTATATGGGTTCTAACTA 57.373 34.615 0.00 0.00 0.00 2.24
3307 3551 6.127619 GGCTTCACTGCTAAAATGTATCCTTT 60.128 38.462 0.00 0.00 0.00 3.11
3330 3574 7.786030 TCATCTTTCCTATGTATATAGCAGGC 58.214 38.462 1.07 0.00 35.88 4.85
3364 3608 2.509548 TCACCTGGTCCCTCATATTTGG 59.490 50.000 0.00 0.00 0.00 3.28
3402 3646 8.860088 ACTTGATAGCTTTAAGTCAAACCATTT 58.140 29.630 0.00 0.00 29.12 2.32
3447 3691 9.062524 CATGTTCTTAATTATTAACGGGGATGA 57.937 33.333 0.00 0.00 0.00 2.92
3537 3781 4.132336 AGTATACATGTGCAGCTGGATTG 58.868 43.478 17.12 16.56 0.00 2.67
3576 3820 3.199071 ACTGAAACTTGTACCAGTGGTCA 59.801 43.478 20.72 13.91 38.32 4.02
3585 3829 5.468746 TGGAAGCATACACTGAAACTTGTAC 59.531 40.000 0.00 0.00 31.09 2.90
3641 3885 8.609176 TGTACAAGATTGTAAACTGTTTGAGAC 58.391 33.333 15.69 6.85 44.46 3.36
3642 3886 8.725405 TGTACAAGATTGTAAACTGTTTGAGA 57.275 30.769 15.69 1.95 44.46 3.27
3725 3972 7.387948 ACTTTGCAGTAGTTCGAACTGAAATAT 59.612 33.333 35.24 14.21 45.89 1.28
3879 4135 3.859061 TCCTCCTAATCTCGTGCTAGA 57.141 47.619 0.00 0.00 0.00 2.43
3923 4179 8.739039 CCATATAGAAGGTTCAGATCTGAGTAG 58.261 40.741 23.92 0.00 41.13 2.57
4001 4259 3.077359 AGTGTGACCTTGCAGAATAAGC 58.923 45.455 0.00 0.00 0.00 3.09
4025 4283 5.246203 GGTAGACATGGCAAGGATATAGACA 59.754 44.000 0.00 0.00 0.00 3.41
4043 4301 4.745649 AGCTTAAGAACATCGTGGTAGAC 58.254 43.478 6.67 0.00 0.00 2.59
4051 4309 5.266242 GCATGGTAAAGCTTAAGAACATCG 58.734 41.667 6.67 0.26 0.00 3.84
4104 4362 6.231951 TGATTTACAGGGAACGATAACACAA 58.768 36.000 0.00 0.00 0.00 3.33
4105 4363 5.795972 TGATTTACAGGGAACGATAACACA 58.204 37.500 0.00 0.00 0.00 3.72
4106 4364 6.103997 TCTGATTTACAGGGAACGATAACAC 58.896 40.000 0.00 0.00 45.76 3.32
4107 4365 6.288941 TCTGATTTACAGGGAACGATAACA 57.711 37.500 0.00 0.00 45.76 2.41
4108 4366 7.114529 CGTATCTGATTTACAGGGAACGATAAC 59.885 40.741 0.00 0.00 45.76 1.89
4134 4392 7.840342 TTGTTAAAGATCTTCATCTGCTCTC 57.160 36.000 8.78 0.00 38.55 3.20
4200 4458 1.197721 CCAACAAGACATGAGTTCGCC 59.802 52.381 0.00 0.00 0.00 5.54
4223 4481 4.032445 TCGTAATTGCTCGCACTTATTGAC 59.968 41.667 5.24 0.00 0.00 3.18
4234 4492 4.211164 TGCCATAGATTTCGTAATTGCTCG 59.789 41.667 0.00 0.00 0.00 5.03
4238 4496 7.251704 AGACTTGCCATAGATTTCGTAATTG 57.748 36.000 0.00 0.00 0.00 2.32
4249 4507 7.050377 CCTAAAATGAGAAGACTTGCCATAGA 58.950 38.462 0.00 0.00 0.00 1.98
4287 4545 3.748048 GCTGATGCTTGACAGTGAGTAAA 59.252 43.478 0.00 0.00 36.62 2.01
4288 4546 3.329386 GCTGATGCTTGACAGTGAGTAA 58.671 45.455 0.00 0.00 36.62 2.24
4289 4547 2.964740 GCTGATGCTTGACAGTGAGTA 58.035 47.619 0.00 0.00 36.62 2.59
4352 4610 7.324935 TGCAGATGATCAAACAGCAAAATATT 58.675 30.769 16.42 0.00 0.00 1.28
4362 4620 5.311265 AGAAAGTCTGCAGATGATCAAACA 58.689 37.500 21.47 0.00 0.00 2.83
4387 4645 9.923786 GTACAATCATGAGCTCTATAGTATACG 57.076 37.037 16.19 0.00 0.00 3.06
4391 4649 8.300286 GCAAGTACAATCATGAGCTCTATAGTA 58.700 37.037 16.19 7.61 0.00 1.82
4393 4651 7.150640 TGCAAGTACAATCATGAGCTCTATAG 58.849 38.462 16.19 2.19 0.00 1.31
4394 4652 7.054491 TGCAAGTACAATCATGAGCTCTATA 57.946 36.000 16.19 0.00 0.00 1.31
4435 4693 6.542005 TGAGTACTTCAAAGATGCAACAAGAA 59.458 34.615 0.00 0.00 31.34 2.52
4437 4695 6.304356 TGAGTACTTCAAAGATGCAACAAG 57.696 37.500 0.00 0.00 31.34 3.16
4467 4843 2.031683 GTGAACCAGAAACCAAGTGTCG 59.968 50.000 0.00 0.00 0.00 4.35
4474 4850 4.229304 TCTCAAAGTGAACCAGAAACCA 57.771 40.909 0.00 0.00 0.00 3.67
4486 4862 5.775686 TGCTTCCATTCAAATCTCAAAGTG 58.224 37.500 0.00 0.00 0.00 3.16
4513 4889 5.984695 AAATCCAAGGTTAAGAAAGGAGC 57.015 39.130 0.00 0.00 0.00 4.70
4514 4890 7.524717 TGAAAATCCAAGGTTAAGAAAGGAG 57.475 36.000 0.00 0.00 0.00 3.69
4519 4895 9.753674 AGTATCATGAAAATCCAAGGTTAAGAA 57.246 29.630 0.00 0.00 0.00 2.52
4532 4908 9.664332 GTAGATAGCCATCAGTATCATGAAAAT 57.336 33.333 0.00 0.00 33.21 1.82
4561 4941 2.293399 CCAAACTCTTGTTACCTGCCAC 59.707 50.000 0.00 0.00 34.96 5.01
4621 5001 2.417933 CCATTCAGAAGGAAGCGTTGAG 59.582 50.000 0.00 0.00 39.30 3.02
4654 5034 1.417517 AGACAGATGTTGGCACAGACA 59.582 47.619 0.00 0.00 42.39 3.41
4663 5043 3.133542 TGAGAGGGCATAGACAGATGTTG 59.866 47.826 0.00 0.00 0.00 3.33
4831 5211 2.064014 GCAATGCTTTCTGTTTCTGGC 58.936 47.619 0.00 0.00 0.00 4.85
4845 5225 3.187227 CGATATGAGGGTACTTGCAATGC 59.813 47.826 0.00 0.00 0.00 3.56
5092 5472 1.065418 AGGGCAGTTCCTAATCCAACG 60.065 52.381 0.00 0.00 34.92 4.10
5370 5750 5.462405 TGAAATGGCAAACAATTACCGTAC 58.538 37.500 0.00 0.00 0.00 3.67
5386 5766 5.614923 TCAAATGCAATTGCTTGAAATGG 57.385 34.783 29.37 11.38 42.66 3.16
5537 5934 6.336566 ACAGATGATGTCAGAGTATTGTGTC 58.663 40.000 0.00 0.00 37.75 3.67
5641 6038 5.560966 AACTGTTTTACCTGTGTCTTGTG 57.439 39.130 0.00 0.00 0.00 3.33
5678 6075 7.961283 GCAAGGTTTCCTACGATTTAAGTAAAG 59.039 37.037 0.00 0.00 31.13 1.85
5679 6076 7.444792 TGCAAGGTTTCCTACGATTTAAGTAAA 59.555 33.333 0.00 0.00 31.13 2.01
5680 6077 6.935771 TGCAAGGTTTCCTACGATTTAAGTAA 59.064 34.615 0.00 0.00 31.13 2.24
5681 6078 6.465948 TGCAAGGTTTCCTACGATTTAAGTA 58.534 36.000 0.00 0.00 31.13 2.24
5783 6180 4.828829 ACGAGGAATAGTTTACAAGGTGG 58.171 43.478 0.00 0.00 0.00 4.61
5826 6223 6.012745 ACCCATGCTCTAGATTTTTCAAAGT 58.987 36.000 0.00 0.00 0.00 2.66
5829 6226 6.721318 ACTACCCATGCTCTAGATTTTTCAA 58.279 36.000 0.00 0.00 0.00 2.69
5830 6227 6.313519 ACTACCCATGCTCTAGATTTTTCA 57.686 37.500 0.00 0.00 0.00 2.69
5831 6228 5.760743 GGACTACCCATGCTCTAGATTTTTC 59.239 44.000 0.00 0.00 34.14 2.29
5873 6351 9.189156 ACTTGCCCGCAATCATAAATTATATAT 57.811 29.630 1.98 0.00 35.20 0.86
5874 6352 8.574251 ACTTGCCCGCAATCATAAATTATATA 57.426 30.769 1.98 0.00 35.20 0.86
5875 6353 7.466746 ACTTGCCCGCAATCATAAATTATAT 57.533 32.000 1.98 0.00 35.20 0.86
5891 6369 1.082104 GCTCGACAAAACTTGCCCG 60.082 57.895 0.00 0.00 0.00 6.13
5995 6631 1.006832 CTGGATAAACCGAGCAACCG 58.993 55.000 0.00 0.00 42.61 4.44
6012 6648 2.281900 TTTCGGCCGGTTTCCCTG 60.282 61.111 27.83 0.00 0.00 4.45
6078 6718 3.134574 TGGGCGTTCTTGTATTTCTGT 57.865 42.857 0.00 0.00 0.00 3.41
6079 6719 4.475944 CTTTGGGCGTTCTTGTATTTCTG 58.524 43.478 0.00 0.00 0.00 3.02
6106 6746 5.861787 ACTTTTCTGTTTGTGCTGTGTTAAC 59.138 36.000 0.00 0.00 0.00 2.01
6108 6748 5.637006 ACTTTTCTGTTTGTGCTGTGTTA 57.363 34.783 0.00 0.00 0.00 2.41
6143 6783 4.260375 GGTGATGTACGATGATGCTGTTTC 60.260 45.833 0.00 0.00 0.00 2.78
6149 6789 1.528586 GCTGGTGATGTACGATGATGC 59.471 52.381 0.00 0.00 0.00 3.91
6184 6824 2.434702 AGTTCAGGGAAGTCAAAGTCGT 59.565 45.455 0.00 0.00 0.00 4.34
6191 6831 2.123589 TGGTGAAGTTCAGGGAAGTCA 58.876 47.619 5.62 0.00 0.00 3.41
6266 6908 0.185416 TACGGGTGGGGCTTCAAAAA 59.815 50.000 0.00 0.00 0.00 1.94
6267 6909 0.250989 CTACGGGTGGGGCTTCAAAA 60.251 55.000 0.00 0.00 0.00 2.44
6268 6910 1.128809 TCTACGGGTGGGGCTTCAAA 61.129 55.000 0.00 0.00 0.00 2.69
6269 6911 1.128809 TTCTACGGGTGGGGCTTCAA 61.129 55.000 0.00 0.00 0.00 2.69
6270 6912 1.536907 TTCTACGGGTGGGGCTTCA 60.537 57.895 0.00 0.00 0.00 3.02
6271 6913 1.078637 GTTCTACGGGTGGGGCTTC 60.079 63.158 0.00 0.00 0.00 3.86
6272 6914 1.420532 TTGTTCTACGGGTGGGGCTT 61.421 55.000 0.00 0.00 0.00 4.35
6273 6915 1.205460 ATTGTTCTACGGGTGGGGCT 61.205 55.000 0.00 0.00 0.00 5.19
6274 6916 0.542805 TATTGTTCTACGGGTGGGGC 59.457 55.000 0.00 0.00 0.00 5.80
6275 6917 1.835531 ACTATTGTTCTACGGGTGGGG 59.164 52.381 0.00 0.00 0.00 4.96
6276 6918 3.528532 GAACTATTGTTCTACGGGTGGG 58.471 50.000 12.08 0.00 46.56 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.