Multiple sequence alignment - TraesCS5A01G132800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G132800 chr5A 100.000 4778 0 0 1 4778 299361367 299356590 0.000000e+00 8824.0
1 TraesCS5A01G132800 chr5A 92.765 387 20 6 267 649 552058777 552058395 1.940000e-153 553.0
2 TraesCS5A01G132800 chr5A 88.182 110 12 1 2 111 96161308 96161416 3.880000e-26 130.0
3 TraesCS5A01G132800 chr5B 95.043 3732 100 31 662 4336 246585607 246589310 0.000000e+00 5788.0
4 TraesCS5A01G132800 chr5B 96.480 2557 66 11 1793 4336 235446018 235443473 0.000000e+00 4202.0
5 TraesCS5A01G132800 chr5B 93.254 919 32 13 914 1805 235447853 235446938 0.000000e+00 1327.0
6 TraesCS5A01G132800 chr5B 92.506 387 25 4 266 649 557104165 557104550 6.990000e-153 551.0
7 TraesCS5A01G132800 chr5B 87.770 278 16 3 662 922 235449017 235448741 4.640000e-80 309.0
8 TraesCS5A01G132800 chr5B 93.370 181 12 0 4484 4664 246589297 246589477 7.880000e-68 268.0
9 TraesCS5A01G132800 chr5B 92.308 182 14 0 4483 4664 235443487 235443306 4.740000e-65 259.0
10 TraesCS5A01G132800 chr5B 75.776 161 28 9 4625 4778 489304148 489304304 2.390000e-08 71.3
11 TraesCS5A01G132800 chr5D 94.498 3708 146 26 662 4336 224873171 224869489 0.000000e+00 5664.0
12 TraesCS5A01G132800 chr5D 91.919 297 22 2 4483 4778 224869503 224869208 9.570000e-112 414.0
13 TraesCS5A01G132800 chr5D 82.759 87 12 3 4574 4659 520343455 520343539 1.840000e-09 75.0
14 TraesCS5A01G132800 chr7D 94.057 387 18 5 267 649 83378724 83378339 2.480000e-162 582.0
15 TraesCS5A01G132800 chr7D 92.727 385 22 4 266 649 58906551 58906930 6.990000e-153 551.0
16 TraesCS5A01G132800 chr7D 90.667 150 8 5 4339 4485 622392970 622393116 1.360000e-45 195.0
17 TraesCS5A01G132800 chr1A 93.557 388 20 4 266 649 518055793 518056179 1.490000e-159 573.0
18 TraesCS5A01G132800 chr1A 92.468 385 23 5 267 648 522010422 522010041 3.250000e-151 545.0
19 TraesCS5A01G132800 chr1A 96.296 81 3 0 2 82 223738516 223738596 3.000000e-27 134.0
20 TraesCS5A01G132800 chr1A 84.328 134 17 3 1714 1845 433014549 433014418 1.400000e-25 128.0
21 TraesCS5A01G132800 chr1A 84.536 97 13 2 4684 4778 247806374 247806470 1.420000e-15 95.3
22 TraesCS5A01G132800 chr3D 93.282 387 18 4 267 649 23155579 23155961 8.980000e-157 564.0
23 TraesCS5A01G132800 chr3D 92.810 153 6 4 4338 4485 163112921 163112769 2.900000e-52 217.0
24 TraesCS5A01G132800 chr3D 92.188 128 7 2 4361 4485 511626136 511626009 1.370000e-40 178.0
25 TraesCS5A01G132800 chr3D 87.963 108 12 1 2 109 60068512 60068618 5.020000e-25 126.0
26 TraesCS5A01G132800 chr3D 89.189 74 3 5 4709 4778 570099296 570099224 2.370000e-13 87.9
27 TraesCS5A01G132800 chr3D 94.231 52 1 2 4719 4770 358180470 358180421 1.430000e-10 78.7
28 TraesCS5A01G132800 chr3B 93.264 386 20 5 267 649 521474910 521475292 8.980000e-157 564.0
29 TraesCS5A01G132800 chr3B 91.667 384 30 2 267 649 116082884 116083266 9.100000e-147 531.0
30 TraesCS5A01G132800 chr3B 78.472 144 27 4 4625 4765 488314933 488315075 1.830000e-14 91.6
31 TraesCS5A01G132800 chr2B 91.391 151 9 3 4338 4484 72399306 72399456 2.250000e-48 204.0
32 TraesCS5A01G132800 chr2B 91.391 151 7 4 4338 4485 631372457 631372604 8.110000e-48 202.0
33 TraesCS5A01G132800 chr3A 86.842 152 10 6 4338 4485 533127612 533127467 1.380000e-35 161.0
34 TraesCS5A01G132800 chr3A 90.741 108 9 1 2 109 425501837 425501943 4.980000e-30 143.0
35 TraesCS5A01G132800 chr2A 90.400 125 8 3 4365 4485 31590991 31590867 1.380000e-35 161.0
36 TraesCS5A01G132800 chr2A 80.337 178 28 6 4599 4774 502837007 502836835 1.400000e-25 128.0
37 TraesCS5A01G132800 chr2D 92.593 108 7 1 2 109 151746278 151746384 2.300000e-33 154.0
38 TraesCS5A01G132800 chr4D 90.741 108 8 2 2 109 192109238 192109133 4.980000e-30 143.0
39 TraesCS5A01G132800 chr6A 90.000 110 10 1 2 111 204451737 204451629 1.790000e-29 141.0
40 TraesCS5A01G132800 chr6D 89.908 109 10 1 2 110 217269907 217270014 6.450000e-29 139.0
41 TraesCS5A01G132800 chr6D 88.889 108 11 1 2 109 300437839 300437945 1.080000e-26 132.0
42 TraesCS5A01G132800 chr1B 78.333 180 32 5 4603 4778 666272110 666272286 5.060000e-20 110.0
43 TraesCS5A01G132800 chr6B 90.141 71 3 4 4709 4776 475583236 475583305 6.590000e-14 89.8
44 TraesCS5A01G132800 chr6B 86.667 75 8 2 4706 4778 678815479 678815405 1.100000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G132800 chr5A 299356590 299361367 4777 True 8824.00 8824 100.0000 1 4778 1 chr5A.!!$R1 4777
1 TraesCS5A01G132800 chr5B 246585607 246589477 3870 False 3028.00 5788 94.2065 662 4664 2 chr5B.!!$F3 4002
2 TraesCS5A01G132800 chr5B 235443306 235449017 5711 True 1524.25 4202 92.4530 662 4664 4 chr5B.!!$R1 4002
3 TraesCS5A01G132800 chr5D 224869208 224873171 3963 True 3039.00 5664 93.2085 662 4778 2 chr5D.!!$R1 4116

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
926 1845 0.109319 CCCAGGCAAAATCGAAACCG 60.109 55.000 0.00 0.00 0.00 4.44 F
1770 2722 0.584876 GTTTCAGTTACCGCAGCGTT 59.415 50.000 15.05 0.74 0.00 4.84 F
2491 4386 1.064946 TGCGGTTTTGCAAAGTCGG 59.935 52.632 26.08 20.44 43.02 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2522 4417 0.249573 GGTTCGTTCGGTCTTGTCCA 60.250 55.0 0.00 0.00 0.00 4.02 R
2833 4728 1.003769 GCAACTGCTGCGTTTTAGGC 61.004 55.0 7.04 4.98 42.37 3.93 R
4486 6394 0.107654 ACTTAGCCCGCCAAGCTTAG 60.108 55.0 0.00 0.00 41.56 2.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.572985 TCTTGAATGCTTGTTGGTGAAG 57.427 40.909 0.00 0.00 0.00 3.02
23 24 4.206375 TCTTGAATGCTTGTTGGTGAAGA 58.794 39.130 0.00 0.00 0.00 2.87
24 25 4.828939 TCTTGAATGCTTGTTGGTGAAGAT 59.171 37.500 0.00 0.00 0.00 2.40
25 26 4.508461 TGAATGCTTGTTGGTGAAGATG 57.492 40.909 0.00 0.00 0.00 2.90
26 27 3.256383 TGAATGCTTGTTGGTGAAGATGG 59.744 43.478 0.00 0.00 0.00 3.51
27 28 2.655090 TGCTTGTTGGTGAAGATGGA 57.345 45.000 0.00 0.00 0.00 3.41
28 29 2.229792 TGCTTGTTGGTGAAGATGGAC 58.770 47.619 0.00 0.00 0.00 4.02
29 30 1.541588 GCTTGTTGGTGAAGATGGACC 59.458 52.381 0.00 0.00 0.00 4.46
30 31 1.806542 CTTGTTGGTGAAGATGGACCG 59.193 52.381 0.00 0.00 34.69 4.79
31 32 0.762418 TGTTGGTGAAGATGGACCGT 59.238 50.000 0.00 0.00 34.69 4.83
32 33 1.972075 TGTTGGTGAAGATGGACCGTA 59.028 47.619 0.00 0.00 34.69 4.02
33 34 2.289195 TGTTGGTGAAGATGGACCGTAC 60.289 50.000 0.00 0.00 34.69 3.67
34 35 0.528924 TGGTGAAGATGGACCGTACG 59.471 55.000 8.69 8.69 34.69 3.67
35 36 0.179119 GGTGAAGATGGACCGTACGG 60.179 60.000 32.22 32.22 42.03 4.02
36 37 0.179119 GTGAAGATGGACCGTACGGG 60.179 60.000 35.86 19.18 43.62 5.28
37 38 1.227176 GAAGATGGACCGTACGGGC 60.227 63.158 35.86 34.43 44.33 6.13
46 47 4.132441 CGTACGGGCCCGCTTGTA 62.132 66.667 43.58 25.69 44.19 2.41
47 48 2.202837 GTACGGGCCCGCTTGTAG 60.203 66.667 43.58 17.10 44.19 2.74
48 49 2.362760 TACGGGCCCGCTTGTAGA 60.363 61.111 43.58 17.26 44.19 2.59
49 50 2.420568 TACGGGCCCGCTTGTAGAG 61.421 63.158 43.58 15.44 44.19 2.43
57 58 3.188786 GCTTGTAGAGCCACGCCG 61.189 66.667 0.00 0.00 46.01 6.46
58 59 2.261671 CTTGTAGAGCCACGCCGT 59.738 61.111 0.00 0.00 0.00 5.68
59 60 2.048597 TTGTAGAGCCACGCCGTG 60.049 61.111 10.95 10.95 0.00 4.94
79 80 4.711949 CCGCAGGCAGGCAAGTCT 62.712 66.667 0.00 0.00 46.14 3.24
80 81 3.429141 CGCAGGCAGGCAAGTCTG 61.429 66.667 7.14 7.14 43.93 3.51
81 82 3.060615 GCAGGCAGGCAAGTCTGG 61.061 66.667 12.46 0.00 41.45 3.86
82 83 2.752358 CAGGCAGGCAAGTCTGGA 59.248 61.111 3.62 0.00 37.58 3.86
83 84 1.376942 CAGGCAGGCAAGTCTGGAG 60.377 63.158 3.62 0.00 37.58 3.86
84 85 1.537397 AGGCAGGCAAGTCTGGAGA 60.537 57.895 3.62 0.00 35.43 3.71
85 86 1.376553 GGCAGGCAAGTCTGGAGAC 60.377 63.158 3.62 0.00 45.08 3.36
96 97 2.003301 GTCTGGAGACTCGCAATTTCC 58.997 52.381 0.00 0.00 41.65 3.13
97 98 1.623311 TCTGGAGACTCGCAATTTCCA 59.377 47.619 0.00 0.00 36.55 3.53
98 99 2.005451 CTGGAGACTCGCAATTTCCAG 58.995 52.381 5.85 5.85 46.21 3.86
99 100 1.347707 TGGAGACTCGCAATTTCCAGT 59.652 47.619 0.00 0.00 33.21 4.00
100 101 2.565391 TGGAGACTCGCAATTTCCAGTA 59.435 45.455 0.00 0.00 33.21 2.74
101 102 2.930682 GGAGACTCGCAATTTCCAGTAC 59.069 50.000 0.00 0.00 0.00 2.73
102 103 2.599082 GAGACTCGCAATTTCCAGTACG 59.401 50.000 0.00 0.00 0.00 3.67
103 104 2.029290 AGACTCGCAATTTCCAGTACGT 60.029 45.455 0.00 0.00 0.00 3.57
104 105 2.334838 ACTCGCAATTTCCAGTACGTC 58.665 47.619 0.00 0.00 0.00 4.34
105 106 1.320555 CTCGCAATTTCCAGTACGTCG 59.679 52.381 0.00 0.00 0.00 5.12
106 107 1.068402 TCGCAATTTCCAGTACGTCGA 60.068 47.619 0.00 0.00 0.00 4.20
107 108 1.058695 CGCAATTTCCAGTACGTCGAC 59.941 52.381 5.18 5.18 0.00 4.20
108 109 2.063266 GCAATTTCCAGTACGTCGACA 58.937 47.619 17.16 0.00 0.00 4.35
109 110 2.477375 GCAATTTCCAGTACGTCGACAA 59.523 45.455 17.16 0.00 0.00 3.18
110 111 3.124636 GCAATTTCCAGTACGTCGACAAT 59.875 43.478 17.16 5.40 0.00 2.71
111 112 4.378046 GCAATTTCCAGTACGTCGACAATT 60.378 41.667 17.16 8.25 0.00 2.32
112 113 5.685841 CAATTTCCAGTACGTCGACAATTT 58.314 37.500 17.16 0.63 0.00 1.82
113 114 6.619018 GCAATTTCCAGTACGTCGACAATTTA 60.619 38.462 17.16 0.00 0.00 1.40
114 115 6.642683 ATTTCCAGTACGTCGACAATTTAG 57.357 37.500 17.16 0.00 0.00 1.85
115 116 5.375417 TTCCAGTACGTCGACAATTTAGA 57.625 39.130 17.16 2.26 0.00 2.10
116 117 5.571784 TCCAGTACGTCGACAATTTAGAT 57.428 39.130 17.16 0.00 0.00 1.98
117 118 5.337554 TCCAGTACGTCGACAATTTAGATG 58.662 41.667 17.16 2.86 0.00 2.90
118 119 5.100259 CCAGTACGTCGACAATTTAGATGT 58.900 41.667 17.16 4.31 37.77 3.06
119 120 5.229469 CCAGTACGTCGACAATTTAGATGTC 59.771 44.000 17.16 0.00 42.94 3.06
120 121 5.229469 CAGTACGTCGACAATTTAGATGTCC 59.771 44.000 17.16 0.00 43.34 4.02
121 122 4.182693 ACGTCGACAATTTAGATGTCCA 57.817 40.909 17.16 0.00 43.34 4.02
122 123 4.562082 ACGTCGACAATTTAGATGTCCAA 58.438 39.130 17.16 0.00 43.34 3.53
123 124 4.992319 ACGTCGACAATTTAGATGTCCAAA 59.008 37.500 17.16 0.00 43.34 3.28
124 125 5.642063 ACGTCGACAATTTAGATGTCCAAAT 59.358 36.000 17.16 0.00 43.34 2.32
125 126 5.959527 CGTCGACAATTTAGATGTCCAAATG 59.040 40.000 17.16 0.00 43.34 2.32
126 127 6.183360 CGTCGACAATTTAGATGTCCAAATGA 60.183 38.462 17.16 0.00 43.34 2.57
127 128 7.465916 CGTCGACAATTTAGATGTCCAAATGAT 60.466 37.037 17.16 0.00 43.34 2.45
128 129 7.852945 GTCGACAATTTAGATGTCCAAATGATC 59.147 37.037 11.55 0.00 43.34 2.92
129 130 7.770433 TCGACAATTTAGATGTCCAAATGATCT 59.230 33.333 0.00 0.00 43.34 2.75
130 131 9.045223 CGACAATTTAGATGTCCAAATGATCTA 57.955 33.333 0.00 0.00 43.34 1.98
137 138 7.959689 AGATGTCCAAATGATCTAGAAATCG 57.040 36.000 0.00 0.00 0.00 3.34
138 139 7.730084 AGATGTCCAAATGATCTAGAAATCGA 58.270 34.615 0.00 0.00 0.00 3.59
139 140 8.206867 AGATGTCCAAATGATCTAGAAATCGAA 58.793 33.333 0.00 0.00 0.00 3.71
140 141 7.776933 TGTCCAAATGATCTAGAAATCGAAG 57.223 36.000 0.00 0.00 0.00 3.79
141 142 6.258727 TGTCCAAATGATCTAGAAATCGAAGC 59.741 38.462 0.00 0.00 0.00 3.86
142 143 6.258727 GTCCAAATGATCTAGAAATCGAAGCA 59.741 38.462 0.00 0.00 0.00 3.91
143 144 6.481313 TCCAAATGATCTAGAAATCGAAGCAG 59.519 38.462 0.00 0.00 0.00 4.24
144 145 6.481313 CCAAATGATCTAGAAATCGAAGCAGA 59.519 38.462 0.00 0.00 0.00 4.26
145 146 7.343691 CAAATGATCTAGAAATCGAAGCAGAC 58.656 38.462 0.00 0.00 0.00 3.51
146 147 4.938080 TGATCTAGAAATCGAAGCAGACC 58.062 43.478 0.00 0.00 0.00 3.85
147 148 4.646945 TGATCTAGAAATCGAAGCAGACCT 59.353 41.667 0.00 0.00 0.00 3.85
148 149 4.640789 TCTAGAAATCGAAGCAGACCTC 57.359 45.455 0.00 0.00 0.00 3.85
149 150 4.017126 TCTAGAAATCGAAGCAGACCTCA 58.983 43.478 0.00 0.00 0.00 3.86
150 151 3.902881 AGAAATCGAAGCAGACCTCAT 57.097 42.857 0.00 0.00 0.00 2.90
151 152 3.529533 AGAAATCGAAGCAGACCTCATG 58.470 45.455 0.00 0.00 0.00 3.07
152 153 1.661341 AATCGAAGCAGACCTCATGC 58.339 50.000 0.00 0.00 44.18 4.06
153 154 0.538584 ATCGAAGCAGACCTCATGCA 59.461 50.000 0.00 0.00 46.31 3.96
154 155 0.321346 TCGAAGCAGACCTCATGCAA 59.679 50.000 0.00 0.00 46.31 4.08
155 156 1.065926 TCGAAGCAGACCTCATGCAAT 60.066 47.619 0.00 0.00 46.31 3.56
156 157 2.168313 TCGAAGCAGACCTCATGCAATA 59.832 45.455 0.00 0.00 46.31 1.90
157 158 2.938451 CGAAGCAGACCTCATGCAATAA 59.062 45.455 0.00 0.00 46.31 1.40
158 159 3.374988 CGAAGCAGACCTCATGCAATAAA 59.625 43.478 0.00 0.00 46.31 1.40
159 160 4.036027 CGAAGCAGACCTCATGCAATAAAT 59.964 41.667 0.00 0.00 46.31 1.40
160 161 5.449588 CGAAGCAGACCTCATGCAATAAATT 60.450 40.000 0.00 0.00 46.31 1.82
161 162 6.238456 CGAAGCAGACCTCATGCAATAAATTA 60.238 38.462 0.00 0.00 46.31 1.40
162 163 7.521099 CGAAGCAGACCTCATGCAATAAATTAT 60.521 37.037 0.00 0.00 46.31 1.28
163 164 7.211966 AGCAGACCTCATGCAATAAATTATC 57.788 36.000 0.00 0.00 46.31 1.75
164 165 7.002879 AGCAGACCTCATGCAATAAATTATCT 58.997 34.615 0.00 0.00 46.31 1.98
165 166 8.159447 AGCAGACCTCATGCAATAAATTATCTA 58.841 33.333 0.00 0.00 46.31 1.98
166 167 8.233190 GCAGACCTCATGCAATAAATTATCTAC 58.767 37.037 0.00 0.00 43.31 2.59
167 168 9.276590 CAGACCTCATGCAATAAATTATCTACA 57.723 33.333 0.00 0.00 0.00 2.74
168 169 9.851686 AGACCTCATGCAATAAATTATCTACAA 57.148 29.630 0.00 0.00 0.00 2.41
230 231 8.924303 TCTGACCATGTATATATAAGTATGGGC 58.076 37.037 22.93 21.86 42.69 5.36
232 233 8.482943 TGACCATGTATATATAAGTATGGGCAC 58.517 37.037 23.70 17.49 45.95 5.01
245 246 4.166011 GGCACCGAATCGCTGCAC 62.166 66.667 22.09 9.74 39.78 4.57
246 247 3.121030 GCACCGAATCGCTGCACT 61.121 61.111 16.90 0.00 38.19 4.40
247 248 2.680913 GCACCGAATCGCTGCACTT 61.681 57.895 16.90 0.00 38.19 3.16
248 249 1.133253 CACCGAATCGCTGCACTTG 59.867 57.895 0.00 0.00 0.00 3.16
249 250 1.005037 ACCGAATCGCTGCACTTGA 60.005 52.632 0.00 0.00 0.00 3.02
250 251 0.391661 ACCGAATCGCTGCACTTGAT 60.392 50.000 0.00 0.00 0.00 2.57
251 252 1.134818 ACCGAATCGCTGCACTTGATA 60.135 47.619 0.00 0.00 0.00 2.15
252 253 1.933181 CCGAATCGCTGCACTTGATAA 59.067 47.619 0.00 0.00 0.00 1.75
253 254 2.545526 CCGAATCGCTGCACTTGATAAT 59.454 45.455 0.00 0.00 0.00 1.28
254 255 3.740832 CCGAATCGCTGCACTTGATAATA 59.259 43.478 0.00 0.00 0.00 0.98
255 256 4.211164 CCGAATCGCTGCACTTGATAATAA 59.789 41.667 0.00 0.00 0.00 1.40
256 257 5.369187 CGAATCGCTGCACTTGATAATAAG 58.631 41.667 0.00 0.00 0.00 1.73
257 258 5.050769 CGAATCGCTGCACTTGATAATAAGT 60.051 40.000 0.00 0.00 41.37 2.24
258 259 5.914085 ATCGCTGCACTTGATAATAAGTC 57.086 39.130 0.00 0.00 38.78 3.01
259 260 4.119862 TCGCTGCACTTGATAATAAGTCC 58.880 43.478 0.00 0.00 38.78 3.85
260 261 3.248602 CGCTGCACTTGATAATAAGTCCC 59.751 47.826 0.00 0.00 38.78 4.46
261 262 4.455606 GCTGCACTTGATAATAAGTCCCT 58.544 43.478 0.00 0.00 38.78 4.20
262 263 4.884164 GCTGCACTTGATAATAAGTCCCTT 59.116 41.667 0.00 0.00 38.78 3.95
263 264 5.008118 GCTGCACTTGATAATAAGTCCCTTC 59.992 44.000 0.00 0.00 38.78 3.46
264 265 5.437060 TGCACTTGATAATAAGTCCCTTCC 58.563 41.667 0.00 0.00 38.78 3.46
265 266 4.822350 GCACTTGATAATAAGTCCCTTCCC 59.178 45.833 0.00 0.00 38.78 3.97
266 267 5.057149 CACTTGATAATAAGTCCCTTCCCG 58.943 45.833 0.00 0.00 38.78 5.14
267 268 4.102681 ACTTGATAATAAGTCCCTTCCCGG 59.897 45.833 0.00 0.00 36.16 5.73
268 269 3.931317 TGATAATAAGTCCCTTCCCGGA 58.069 45.455 0.73 0.00 33.16 5.14
269 270 3.901844 TGATAATAAGTCCCTTCCCGGAG 59.098 47.826 0.73 0.00 30.62 4.63
284 285 2.256117 CGGAGGAGAACTTTTGGTGT 57.744 50.000 0.00 0.00 0.00 4.16
285 286 3.396260 CGGAGGAGAACTTTTGGTGTA 57.604 47.619 0.00 0.00 0.00 2.90
286 287 3.939066 CGGAGGAGAACTTTTGGTGTAT 58.061 45.455 0.00 0.00 0.00 2.29
287 288 3.684788 CGGAGGAGAACTTTTGGTGTATG 59.315 47.826 0.00 0.00 0.00 2.39
288 289 4.010349 GGAGGAGAACTTTTGGTGTATGG 58.990 47.826 0.00 0.00 0.00 2.74
289 290 4.010349 GAGGAGAACTTTTGGTGTATGGG 58.990 47.826 0.00 0.00 0.00 4.00
290 291 3.089284 GGAGAACTTTTGGTGTATGGGG 58.911 50.000 0.00 0.00 0.00 4.96
291 292 3.245122 GGAGAACTTTTGGTGTATGGGGA 60.245 47.826 0.00 0.00 0.00 4.81
292 293 3.756963 GAGAACTTTTGGTGTATGGGGAC 59.243 47.826 0.00 0.00 0.00 4.46
303 304 4.518056 TGGGGACATATGCACCCT 57.482 55.556 26.78 0.12 43.72 4.34
304 305 3.664869 TGGGGACATATGCACCCTA 57.335 52.632 26.78 21.97 43.72 3.53
305 306 2.132303 TGGGGACATATGCACCCTAT 57.868 50.000 26.78 0.00 43.72 2.57
306 307 3.283712 TGGGGACATATGCACCCTATA 57.716 47.619 26.78 16.20 43.72 1.31
307 308 3.814284 TGGGGACATATGCACCCTATAT 58.186 45.455 26.78 0.00 43.72 0.86
308 309 4.966611 TGGGGACATATGCACCCTATATA 58.033 43.478 26.78 10.94 43.72 0.86
309 310 4.968719 TGGGGACATATGCACCCTATATAG 59.031 45.833 26.78 2.46 43.72 1.31
310 311 5.216622 GGGGACATATGCACCCTATATAGA 58.783 45.833 26.98 0.00 42.86 1.98
311 312 5.846714 GGGGACATATGCACCCTATATAGAT 59.153 44.000 26.98 0.00 42.86 1.98
312 313 6.330250 GGGGACATATGCACCCTATATAGATT 59.670 42.308 26.98 0.00 42.86 2.40
313 314 7.147302 GGGGACATATGCACCCTATATAGATTT 60.147 40.741 26.98 0.00 42.86 2.17
314 315 8.275040 GGGACATATGCACCCTATATAGATTTT 58.725 37.037 23.37 0.00 40.39 1.82
315 316 9.686683 GGACATATGCACCCTATATAGATTTTT 57.313 33.333 11.53 0.00 0.00 1.94
347 348 9.650371 GTAATTCAGCAAAAAGTCAAAAATTCC 57.350 29.630 0.00 0.00 0.00 3.01
348 349 8.510243 AATTCAGCAAAAAGTCAAAAATTCCT 57.490 26.923 0.00 0.00 0.00 3.36
349 350 6.907206 TCAGCAAAAAGTCAAAAATTCCTG 57.093 33.333 0.00 0.00 0.00 3.86
350 351 6.638610 TCAGCAAAAAGTCAAAAATTCCTGA 58.361 32.000 0.00 0.00 0.00 3.86
351 352 7.102346 TCAGCAAAAAGTCAAAAATTCCTGAA 58.898 30.769 0.00 0.00 0.00 3.02
352 353 7.605691 TCAGCAAAAAGTCAAAAATTCCTGAAA 59.394 29.630 0.00 0.00 0.00 2.69
353 354 8.235905 CAGCAAAAAGTCAAAAATTCCTGAAAA 58.764 29.630 0.00 0.00 0.00 2.29
354 355 8.959548 AGCAAAAAGTCAAAAATTCCTGAAAAT 58.040 25.926 0.00 0.00 0.00 1.82
384 385 8.842358 TTGAAATAAACTCGACCTTCTATTGT 57.158 30.769 0.00 0.00 0.00 2.71
385 386 9.932207 TTGAAATAAACTCGACCTTCTATTGTA 57.068 29.630 0.00 0.00 0.00 2.41
386 387 9.362539 TGAAATAAACTCGACCTTCTATTGTAC 57.637 33.333 0.00 0.00 0.00 2.90
387 388 9.583765 GAAATAAACTCGACCTTCTATTGTACT 57.416 33.333 0.00 0.00 0.00 2.73
388 389 9.583765 AAATAAACTCGACCTTCTATTGTACTC 57.416 33.333 0.00 0.00 0.00 2.59
389 390 4.879104 ACTCGACCTTCTATTGTACTCG 57.121 45.455 0.00 0.00 0.00 4.18
390 391 4.260170 ACTCGACCTTCTATTGTACTCGT 58.740 43.478 0.00 0.00 0.00 4.18
391 392 4.094590 ACTCGACCTTCTATTGTACTCGTG 59.905 45.833 0.00 0.00 0.00 4.35
392 393 4.256110 TCGACCTTCTATTGTACTCGTGA 58.744 43.478 0.00 0.00 0.00 4.35
393 394 4.331992 TCGACCTTCTATTGTACTCGTGAG 59.668 45.833 0.00 0.00 0.00 3.51
394 395 4.331992 CGACCTTCTATTGTACTCGTGAGA 59.668 45.833 3.44 0.00 39.12 3.27
395 396 5.163784 CGACCTTCTATTGTACTCGTGAGAA 60.164 44.000 3.44 0.00 41.32 2.87
396 397 6.585695 ACCTTCTATTGTACTCGTGAGAAA 57.414 37.500 3.44 0.00 41.32 2.52
397 398 7.171630 ACCTTCTATTGTACTCGTGAGAAAT 57.828 36.000 3.44 3.72 41.32 2.17
398 399 8.289939 ACCTTCTATTGTACTCGTGAGAAATA 57.710 34.615 3.44 4.58 41.32 1.40
399 400 8.746530 ACCTTCTATTGTACTCGTGAGAAATAA 58.253 33.333 3.44 0.00 41.32 1.40
400 401 9.582431 CCTTCTATTGTACTCGTGAGAAATAAA 57.418 33.333 3.44 3.23 41.32 1.40
405 406 8.786826 ATTGTACTCGTGAGAAATAAAATCCA 57.213 30.769 3.44 0.00 41.32 3.41
406 407 8.610248 TTGTACTCGTGAGAAATAAAATCCAA 57.390 30.769 3.44 0.00 41.32 3.53
407 408 8.610248 TGTACTCGTGAGAAATAAAATCCAAA 57.390 30.769 3.44 0.00 41.32 3.28
408 409 9.058174 TGTACTCGTGAGAAATAAAATCCAAAA 57.942 29.630 3.44 0.00 41.32 2.44
409 410 9.887406 GTACTCGTGAGAAATAAAATCCAAAAA 57.113 29.630 3.44 0.00 41.32 1.94
470 471 7.759489 TTTTGGCTGAAATAGTGTGAATAGT 57.241 32.000 0.00 0.00 0.00 2.12
471 472 6.741992 TTGGCTGAAATAGTGTGAATAGTG 57.258 37.500 0.00 0.00 0.00 2.74
472 473 6.048732 TGGCTGAAATAGTGTGAATAGTGA 57.951 37.500 0.00 0.00 0.00 3.41
473 474 5.874810 TGGCTGAAATAGTGTGAATAGTGAC 59.125 40.000 0.00 0.00 0.00 3.67
474 475 5.294552 GGCTGAAATAGTGTGAATAGTGACC 59.705 44.000 0.00 0.00 0.00 4.02
475 476 6.109359 GCTGAAATAGTGTGAATAGTGACCT 58.891 40.000 0.00 0.00 0.00 3.85
476 477 7.265673 GCTGAAATAGTGTGAATAGTGACCTA 58.734 38.462 0.00 0.00 0.00 3.08
477 478 7.928706 GCTGAAATAGTGTGAATAGTGACCTAT 59.071 37.037 0.00 0.00 35.33 2.57
523 524 6.827586 TTTTACTGTGAGGTCAACTTTTGT 57.172 33.333 0.00 0.00 0.00 2.83
524 525 7.925043 TTTTACTGTGAGGTCAACTTTTGTA 57.075 32.000 0.00 0.00 0.00 2.41
525 526 8.514330 TTTTACTGTGAGGTCAACTTTTGTAT 57.486 30.769 0.00 0.00 0.00 2.29
526 527 8.514330 TTTACTGTGAGGTCAACTTTTGTATT 57.486 30.769 0.00 0.00 0.00 1.89
527 528 8.514330 TTACTGTGAGGTCAACTTTTGTATTT 57.486 30.769 0.00 0.00 0.00 1.40
528 529 7.404671 ACTGTGAGGTCAACTTTTGTATTTT 57.595 32.000 0.00 0.00 0.00 1.82
529 530 7.836842 ACTGTGAGGTCAACTTTTGTATTTTT 58.163 30.769 0.00 0.00 0.00 1.94
554 555 9.805966 TTTTCGTCGACATTTATATATCAATGC 57.194 29.630 17.16 10.09 34.26 3.56
555 556 8.527567 TTCGTCGACATTTATATATCAATGCA 57.472 30.769 17.16 0.00 34.26 3.96
556 557 8.527567 TCGTCGACATTTATATATCAATGCAA 57.472 30.769 17.16 3.45 34.26 4.08
557 558 8.983724 TCGTCGACATTTATATATCAATGCAAA 58.016 29.630 17.16 0.17 34.26 3.68
558 559 9.592720 CGTCGACATTTATATATCAATGCAAAA 57.407 29.630 17.16 0.00 34.26 2.44
571 572 6.449635 TCAATGCAAAAGTAAGTCAAGTGT 57.550 33.333 0.00 0.00 0.00 3.55
572 573 6.862209 TCAATGCAAAAGTAAGTCAAGTGTT 58.138 32.000 0.00 0.00 0.00 3.32
573 574 7.319646 TCAATGCAAAAGTAAGTCAAGTGTTT 58.680 30.769 0.00 0.00 0.00 2.83
574 575 7.816995 TCAATGCAAAAGTAAGTCAAGTGTTTT 59.183 29.630 0.00 0.00 0.00 2.43
575 576 6.942886 TGCAAAAGTAAGTCAAGTGTTTTG 57.057 33.333 0.00 0.00 37.74 2.44
576 577 6.451393 TGCAAAAGTAAGTCAAGTGTTTTGT 58.549 32.000 0.00 0.00 37.26 2.83
577 578 6.584563 TGCAAAAGTAAGTCAAGTGTTTTGTC 59.415 34.615 0.00 0.00 37.26 3.18
578 579 6.034577 GCAAAAGTAAGTCAAGTGTTTTGTCC 59.965 38.462 0.00 0.00 37.26 4.02
579 580 6.827586 AAAGTAAGTCAAGTGTTTTGTCCA 57.172 33.333 0.00 0.00 0.00 4.02
580 581 6.827586 AAGTAAGTCAAGTGTTTTGTCCAA 57.172 33.333 0.00 0.00 0.00 3.53
581 582 6.827586 AGTAAGTCAAGTGTTTTGTCCAAA 57.172 33.333 0.00 0.00 0.00 3.28
582 583 7.404671 AGTAAGTCAAGTGTTTTGTCCAAAT 57.595 32.000 0.00 0.00 0.00 2.32
583 584 8.514330 AGTAAGTCAAGTGTTTTGTCCAAATA 57.486 30.769 0.00 0.00 0.00 1.40
584 585 8.621286 AGTAAGTCAAGTGTTTTGTCCAAATAG 58.379 33.333 0.00 0.00 0.00 1.73
585 586 7.404671 AAGTCAAGTGTTTTGTCCAAATAGT 57.595 32.000 0.00 0.00 0.00 2.12
586 587 7.404671 AGTCAAGTGTTTTGTCCAAATAGTT 57.595 32.000 0.00 0.00 31.15 2.24
587 588 7.480810 AGTCAAGTGTTTTGTCCAAATAGTTC 58.519 34.615 0.00 0.00 29.13 3.01
588 589 7.339466 AGTCAAGTGTTTTGTCCAAATAGTTCT 59.661 33.333 0.00 0.00 29.13 3.01
589 590 7.973944 GTCAAGTGTTTTGTCCAAATAGTTCTT 59.026 33.333 0.00 0.00 29.13 2.52
590 591 9.179909 TCAAGTGTTTTGTCCAAATAGTTCTTA 57.820 29.630 0.00 0.00 29.13 2.10
591 592 9.233232 CAAGTGTTTTGTCCAAATAGTTCTTAC 57.767 33.333 0.00 0.00 29.13 2.34
592 593 7.937649 AGTGTTTTGTCCAAATAGTTCTTACC 58.062 34.615 0.00 0.00 0.00 2.85
593 594 7.778382 AGTGTTTTGTCCAAATAGTTCTTACCT 59.222 33.333 0.00 0.00 0.00 3.08
594 595 9.059260 GTGTTTTGTCCAAATAGTTCTTACCTA 57.941 33.333 0.00 0.00 0.00 3.08
595 596 9.802039 TGTTTTGTCCAAATAGTTCTTACCTAT 57.198 29.630 0.00 0.00 0.00 2.57
650 651 9.896645 ATCCTCATATAAGGTGCATATACAAAG 57.103 33.333 0.00 0.00 37.69 2.77
651 652 8.880244 TCCTCATATAAGGTGCATATACAAAGT 58.120 33.333 0.00 0.00 37.69 2.66
652 653 8.939929 CCTCATATAAGGTGCATATACAAAGTG 58.060 37.037 0.00 0.00 0.00 3.16
653 654 9.494271 CTCATATAAGGTGCATATACAAAGTGT 57.506 33.333 0.00 0.00 0.00 3.55
659 660 7.568199 AGGTGCATATACAAAGTGTATTTCC 57.432 36.000 6.24 3.68 40.40 3.13
660 661 6.546034 AGGTGCATATACAAAGTGTATTTCCC 59.454 38.462 6.24 1.76 40.40 3.97
664 665 6.482308 GCATATACAAAGTGTATTTCCCGTCT 59.518 38.462 6.24 0.00 40.40 4.18
713 718 2.203451 GCAGGCAGATGGGATGGG 60.203 66.667 0.00 0.00 0.00 4.00
715 720 2.045132 AGGCAGATGGGATGGGGT 59.955 61.111 0.00 0.00 0.00 4.95
895 918 4.154347 GCTGGCGACTCCCCTGAG 62.154 72.222 0.00 0.00 44.62 3.35
926 1845 0.109319 CCCAGGCAAAATCGAAACCG 60.109 55.000 0.00 0.00 0.00 4.44
987 1912 3.483869 CCCCAGCTCCCTACTGCC 61.484 72.222 0.00 0.00 33.65 4.85
1023 1948 4.083862 GACGCCGCCTTTCCCTCT 62.084 66.667 0.00 0.00 0.00 3.69
1166 2118 3.702048 CCCCTTCTCCGACGCCAA 61.702 66.667 0.00 0.00 0.00 4.52
1770 2722 0.584876 GTTTCAGTTACCGCAGCGTT 59.415 50.000 15.05 0.74 0.00 4.84
1813 3697 1.534476 TGGAGGGACAAGTACGCCA 60.534 57.895 0.00 0.00 0.00 5.69
1821 3705 1.737793 GACAAGTACGCCAATGAAGGG 59.262 52.381 0.00 0.00 0.00 3.95
2109 3999 9.056005 TGTGAAATTGTGAATATATGGCTACTC 57.944 33.333 0.00 0.00 0.00 2.59
2171 4066 3.245048 TCGTCGTATGCAGCAATTATGTG 59.755 43.478 0.00 0.00 0.00 3.21
2203 4098 4.330944 TTGTCATTTGTCCTCGTACTGT 57.669 40.909 0.00 0.00 0.00 3.55
2208 4103 4.707934 TCATTTGTCCTCGTACTGTCCATA 59.292 41.667 0.00 0.00 0.00 2.74
2265 4160 3.159213 TGAAATGGGTGCATTCTGTCT 57.841 42.857 0.00 0.00 0.00 3.41
2491 4386 1.064946 TGCGGTTTTGCAAAGTCGG 59.935 52.632 26.08 20.44 43.02 4.79
2512 4407 2.435586 CAGCTGAGCGGAAGGTGG 60.436 66.667 8.42 0.00 45.11 4.61
2522 4417 3.620700 AGCGGAAGGTGGTTAGGAAACT 61.621 50.000 0.00 0.00 43.06 2.66
2528 4423 2.781174 AGGTGGTTAGGAAACTGGACAA 59.219 45.455 0.00 0.00 43.88 3.18
2559 4454 4.755123 CGAACCAAACAAAGTCAGTATCCT 59.245 41.667 0.00 0.00 0.00 3.24
2565 4460 7.228706 ACCAAACAAAGTCAGTATCCTGTAAAG 59.771 37.037 0.00 0.00 39.82 1.85
2593 4488 5.401531 TCAGAAGCGACACTTACCTATTT 57.598 39.130 0.00 0.00 39.29 1.40
2678 4573 9.170734 CACTCATATTGTGATATTTCCCATAGG 57.829 37.037 0.56 0.00 37.60 2.57
2993 4888 4.559300 GCTTTGCAATTCTGACCTTTGCTA 60.559 41.667 0.00 8.89 44.62 3.49
2994 4889 4.771590 TTGCAATTCTGACCTTTGCTAG 57.228 40.909 15.73 0.00 44.62 3.42
3349 5250 9.078990 CATATACAGTCAACAGACCCTATAAGA 57.921 37.037 0.00 0.00 32.62 2.10
3375 5276 3.748568 GTGTTTCCTTGGTGTTTTTGCAA 59.251 39.130 0.00 0.00 0.00 4.08
3908 5814 2.510906 AGCAAACTGGCTGACGGT 59.489 55.556 0.00 0.00 43.89 4.83
4006 5912 1.328680 GACATGTTGATGGCTGTAGCG 59.671 52.381 0.00 0.00 43.26 4.26
4019 5925 5.874831 TGGCTGTAGCGTGTTTATTAATTG 58.125 37.500 0.00 0.00 43.26 2.32
4077 5983 4.830600 TGGCTAGAATGTATGATACGGTGA 59.169 41.667 0.00 0.00 0.00 4.02
4119 6025 7.012044 ACCAGAGTTATAAACATACCGATTTGC 59.988 37.037 0.00 0.00 0.00 3.68
4288 6196 5.147330 AGTTCTCCACGTATGACAATTCA 57.853 39.130 0.00 0.00 35.73 2.57
4289 6197 5.547465 AGTTCTCCACGTATGACAATTCAA 58.453 37.500 0.00 0.00 34.61 2.69
4326 6234 9.899661 TTTATATGTAGCTAACCATTGTGTTCT 57.100 29.630 0.00 0.00 0.00 3.01
4329 6237 7.849804 ATGTAGCTAACCATTGTGTTCTAAG 57.150 36.000 0.00 0.00 0.00 2.18
4330 6238 5.642063 TGTAGCTAACCATTGTGTTCTAAGC 59.358 40.000 0.00 0.00 30.84 3.09
4331 6239 4.911390 AGCTAACCATTGTGTTCTAAGCT 58.089 39.130 0.00 7.43 34.46 3.74
4332 6240 5.316987 AGCTAACCATTGTGTTCTAAGCTT 58.683 37.500 3.48 3.48 35.28 3.74
4333 6241 5.182001 AGCTAACCATTGTGTTCTAAGCTTG 59.818 40.000 9.86 0.00 35.28 4.01
4334 6242 4.853924 AACCATTGTGTTCTAAGCTTGG 57.146 40.909 9.86 6.29 0.00 3.61
4335 6243 2.558359 ACCATTGTGTTCTAAGCTTGGC 59.442 45.455 9.86 0.00 0.00 4.52
4336 6244 2.094545 CCATTGTGTTCTAAGCTTGGCC 60.095 50.000 9.86 0.00 0.00 5.36
4337 6245 2.656947 TTGTGTTCTAAGCTTGGCCT 57.343 45.000 9.86 0.00 0.00 5.19
4338 6246 2.656947 TGTGTTCTAAGCTTGGCCTT 57.343 45.000 9.86 0.00 0.00 4.35
4339 6247 2.944129 TGTGTTCTAAGCTTGGCCTTT 58.056 42.857 9.86 0.00 0.00 3.11
4340 6248 3.295973 TGTGTTCTAAGCTTGGCCTTTT 58.704 40.909 9.86 0.00 0.00 2.27
4341 6249 3.704061 TGTGTTCTAAGCTTGGCCTTTTT 59.296 39.130 9.86 0.00 0.00 1.94
4363 6271 5.675684 TTTTTGAGGGGAAATGCCTATTC 57.324 39.130 0.00 0.00 36.66 1.75
4364 6272 2.638480 TGAGGGGAAATGCCTATTCG 57.362 50.000 0.00 0.00 36.66 3.34
4365 6273 1.142870 TGAGGGGAAATGCCTATTCGG 59.857 52.381 0.00 0.00 36.66 4.30
4377 6285 3.963383 CCTATTCGGCGCACTTTATTT 57.037 42.857 10.83 0.00 0.00 1.40
4379 6287 5.018695 CCTATTCGGCGCACTTTATTTAG 57.981 43.478 10.83 0.00 0.00 1.85
4380 6288 4.748102 CCTATTCGGCGCACTTTATTTAGA 59.252 41.667 10.83 0.00 0.00 2.10
4381 6289 5.235616 CCTATTCGGCGCACTTTATTTAGAA 59.764 40.000 10.83 0.00 0.00 2.10
4382 6290 4.593597 TTCGGCGCACTTTATTTAGAAG 57.406 40.909 10.83 0.00 0.00 2.85
4383 6291 2.350498 TCGGCGCACTTTATTTAGAAGC 59.650 45.455 10.83 0.00 0.00 3.86
4384 6292 2.538939 CGGCGCACTTTATTTAGAAGCC 60.539 50.000 10.83 0.00 38.73 4.35
4385 6293 2.422127 GGCGCACTTTATTTAGAAGCCA 59.578 45.455 10.83 0.00 41.46 4.75
4386 6294 3.119637 GGCGCACTTTATTTAGAAGCCAA 60.120 43.478 10.83 0.00 41.46 4.52
4387 6295 3.851969 GCGCACTTTATTTAGAAGCCAAC 59.148 43.478 0.30 0.00 0.00 3.77
4388 6296 4.614993 GCGCACTTTATTTAGAAGCCAACA 60.615 41.667 0.30 0.00 0.00 3.33
4389 6297 5.457140 CGCACTTTATTTAGAAGCCAACAA 58.543 37.500 0.00 0.00 0.00 2.83
4390 6298 5.918011 CGCACTTTATTTAGAAGCCAACAAA 59.082 36.000 0.00 0.00 0.00 2.83
4391 6299 6.088085 CGCACTTTATTTAGAAGCCAACAAAG 59.912 38.462 0.00 0.00 0.00 2.77
4392 6300 6.923508 GCACTTTATTTAGAAGCCAACAAAGT 59.076 34.615 0.00 0.00 35.86 2.66
4393 6301 7.438160 GCACTTTATTTAGAAGCCAACAAAGTT 59.562 33.333 0.00 0.00 33.86 2.66
4394 6302 9.959749 CACTTTATTTAGAAGCCAACAAAGTTA 57.040 29.630 0.00 0.00 33.86 2.24
4395 6303 9.961265 ACTTTATTTAGAAGCCAACAAAGTTAC 57.039 29.630 0.00 0.00 32.60 2.50
4396 6304 9.959749 CTTTATTTAGAAGCCAACAAAGTTACA 57.040 29.630 0.00 0.00 0.00 2.41
4399 6307 7.575414 TTTAGAAGCCAACAAAGTTACATCA 57.425 32.000 0.00 0.00 0.00 3.07
4400 6308 7.759489 TTAGAAGCCAACAAAGTTACATCAT 57.241 32.000 0.00 0.00 0.00 2.45
4401 6309 6.017400 AGAAGCCAACAAAGTTACATCATG 57.983 37.500 0.00 0.00 0.00 3.07
4402 6310 5.769662 AGAAGCCAACAAAGTTACATCATGA 59.230 36.000 0.00 0.00 0.00 3.07
4403 6311 6.265196 AGAAGCCAACAAAGTTACATCATGAA 59.735 34.615 0.00 0.00 0.00 2.57
4404 6312 6.594788 AGCCAACAAAGTTACATCATGAAT 57.405 33.333 0.00 0.00 0.00 2.57
4405 6313 7.701539 AGCCAACAAAGTTACATCATGAATA 57.298 32.000 0.00 0.00 0.00 1.75
4406 6314 8.121305 AGCCAACAAAGTTACATCATGAATAA 57.879 30.769 0.00 0.00 0.00 1.40
4407 6315 8.584157 AGCCAACAAAGTTACATCATGAATAAA 58.416 29.630 0.00 0.00 0.00 1.40
4408 6316 9.202273 GCCAACAAAGTTACATCATGAATAAAA 57.798 29.630 0.00 0.00 0.00 1.52
4430 6338 6.928348 AAAATGGAAGTAAAAACTAGGGGG 57.072 37.500 0.00 0.00 0.00 5.40
4470 6378 9.831737 AAAATAAAAGACTTCGACTCATGAATG 57.168 29.630 0.00 0.00 0.00 2.67
4471 6379 8.553459 AATAAAAGACTTCGACTCATGAATGT 57.447 30.769 0.00 0.00 0.00 2.71
4472 6380 6.867662 AAAAGACTTCGACTCATGAATGTT 57.132 33.333 0.00 0.00 0.00 2.71
4473 6381 6.867662 AAAGACTTCGACTCATGAATGTTT 57.132 33.333 0.00 0.00 0.00 2.83
4474 6382 6.867662 AAGACTTCGACTCATGAATGTTTT 57.132 33.333 0.00 0.00 0.00 2.43
4475 6383 6.233430 AGACTTCGACTCATGAATGTTTTG 57.767 37.500 0.00 0.00 0.00 2.44
4476 6384 4.787598 ACTTCGACTCATGAATGTTTTGC 58.212 39.130 0.00 0.00 0.00 3.68
4477 6385 4.516698 ACTTCGACTCATGAATGTTTTGCT 59.483 37.500 0.00 0.00 0.00 3.91
4478 6386 5.700832 ACTTCGACTCATGAATGTTTTGCTA 59.299 36.000 0.00 0.00 0.00 3.49
4479 6387 6.204688 ACTTCGACTCATGAATGTTTTGCTAA 59.795 34.615 0.00 0.00 0.00 3.09
4480 6388 6.169419 TCGACTCATGAATGTTTTGCTAAG 57.831 37.500 0.00 0.00 0.00 2.18
4481 6389 5.700832 TCGACTCATGAATGTTTTGCTAAGT 59.299 36.000 0.00 0.00 0.00 2.24
4482 6390 6.204688 TCGACTCATGAATGTTTTGCTAAGTT 59.795 34.615 0.00 0.00 0.00 2.66
4483 6391 6.303970 CGACTCATGAATGTTTTGCTAAGTTG 59.696 38.462 0.00 0.00 0.00 3.16
4484 6392 7.042797 ACTCATGAATGTTTTGCTAAGTTGT 57.957 32.000 0.00 0.00 0.00 3.32
4485 6393 7.491682 ACTCATGAATGTTTTGCTAAGTTGTT 58.508 30.769 0.00 0.00 0.00 2.83
4486 6394 7.649306 ACTCATGAATGTTTTGCTAAGTTGTTC 59.351 33.333 0.00 0.00 0.00 3.18
4540 6448 3.546724 TCCCGTTTGATCTTGTTCAACA 58.453 40.909 0.00 0.00 35.42 3.33
4554 6462 5.036117 TGTTCAACAGAGCTCCTAAAACT 57.964 39.130 10.93 0.00 0.00 2.66
4587 6495 2.330372 GGTTCGGACGGGCCTTTTC 61.330 63.158 0.84 0.00 0.00 2.29
4588 6496 1.598685 GTTCGGACGGGCCTTTTCA 60.599 57.895 0.84 0.00 0.00 2.69
4630 6538 3.558321 CCCGGGAGTGAACAGTAAAATCA 60.558 47.826 18.48 0.00 0.00 2.57
4692 6601 1.876156 GTGCTAAAGCTGCTTGAGTGT 59.124 47.619 24.16 8.46 42.66 3.55
4696 6605 2.042686 AAAGCTGCTTGAGTGTGTGA 57.957 45.000 16.73 0.00 0.00 3.58
4717 6626 5.927689 GTGATGTTCATGCCAAATTTCAGAA 59.072 36.000 0.00 0.00 0.00 3.02
4748 6657 6.294508 GGACATTTAAGTAGCTCTTGGCAAAA 60.295 38.462 0.00 0.00 44.79 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.828939 TCTTCACCAACAAGCATTCAAGAT 59.171 37.500 0.00 0.00 0.00 2.40
1 2 4.206375 TCTTCACCAACAAGCATTCAAGA 58.794 39.130 0.00 0.00 0.00 3.02
2 3 4.572985 TCTTCACCAACAAGCATTCAAG 57.427 40.909 0.00 0.00 0.00 3.02
3 4 4.262121 CCATCTTCACCAACAAGCATTCAA 60.262 41.667 0.00 0.00 0.00 2.69
4 5 3.256383 CCATCTTCACCAACAAGCATTCA 59.744 43.478 0.00 0.00 0.00 2.57
5 6 3.507233 TCCATCTTCACCAACAAGCATTC 59.493 43.478 0.00 0.00 0.00 2.67
6 7 3.256631 GTCCATCTTCACCAACAAGCATT 59.743 43.478 0.00 0.00 0.00 3.56
7 8 2.821969 GTCCATCTTCACCAACAAGCAT 59.178 45.455 0.00 0.00 0.00 3.79
8 9 2.229792 GTCCATCTTCACCAACAAGCA 58.770 47.619 0.00 0.00 0.00 3.91
9 10 1.541588 GGTCCATCTTCACCAACAAGC 59.458 52.381 0.00 0.00 32.33 4.01
10 11 1.806542 CGGTCCATCTTCACCAACAAG 59.193 52.381 0.00 0.00 32.33 3.16
11 12 1.142060 ACGGTCCATCTTCACCAACAA 59.858 47.619 0.00 0.00 32.33 2.83
12 13 0.762418 ACGGTCCATCTTCACCAACA 59.238 50.000 0.00 0.00 32.33 3.33
13 14 2.344025 GTACGGTCCATCTTCACCAAC 58.656 52.381 0.00 0.00 32.33 3.77
14 15 1.067425 CGTACGGTCCATCTTCACCAA 60.067 52.381 7.57 0.00 32.33 3.67
15 16 0.528924 CGTACGGTCCATCTTCACCA 59.471 55.000 7.57 0.00 32.33 4.17
16 17 0.179119 CCGTACGGTCCATCTTCACC 60.179 60.000 26.39 0.00 0.00 4.02
17 18 0.179119 CCCGTACGGTCCATCTTCAC 60.179 60.000 31.24 0.00 0.00 3.18
18 19 1.952102 GCCCGTACGGTCCATCTTCA 61.952 60.000 31.24 0.00 0.00 3.02
19 20 1.227176 GCCCGTACGGTCCATCTTC 60.227 63.158 31.24 7.31 0.00 2.87
20 21 2.728435 GGCCCGTACGGTCCATCTT 61.728 63.158 28.71 0.00 0.00 2.40
21 22 3.152400 GGCCCGTACGGTCCATCT 61.152 66.667 28.71 0.00 0.00 2.90
29 30 4.132441 TACAAGCGGGCCCGTACG 62.132 66.667 42.53 31.43 42.09 3.67
30 31 2.202837 CTACAAGCGGGCCCGTAC 60.203 66.667 42.53 28.39 42.09 3.67
31 32 2.362760 TCTACAAGCGGGCCCGTA 60.363 61.111 42.53 26.66 42.09 4.02
32 33 3.771160 CTCTACAAGCGGGCCCGT 61.771 66.667 42.53 27.53 42.09 5.28
41 42 2.094659 CACGGCGTGGCTCTACAAG 61.095 63.158 31.19 1.85 0.00 3.16
42 43 2.048597 CACGGCGTGGCTCTACAA 60.049 61.111 31.19 0.00 0.00 2.41
62 63 4.711949 AGACTTGCCTGCCTGCGG 62.712 66.667 0.00 0.00 0.00 5.69
63 64 3.429141 CAGACTTGCCTGCCTGCG 61.429 66.667 0.00 0.00 0.00 5.18
64 65 3.060615 CCAGACTTGCCTGCCTGC 61.061 66.667 0.00 0.00 32.97 4.85
65 66 1.376942 CTCCAGACTTGCCTGCCTG 60.377 63.158 0.00 0.00 32.97 4.85
66 67 1.537397 TCTCCAGACTTGCCTGCCT 60.537 57.895 0.00 0.00 32.97 4.75
67 68 1.376553 GTCTCCAGACTTGCCTGCC 60.377 63.158 0.00 0.00 41.65 4.85
68 69 4.292784 GTCTCCAGACTTGCCTGC 57.707 61.111 0.00 0.00 41.65 4.85
76 77 2.003301 GGAAATTGCGAGTCTCCAGAC 58.997 52.381 0.00 0.00 45.08 3.51
77 78 1.623311 TGGAAATTGCGAGTCTCCAGA 59.377 47.619 0.00 0.00 32.42 3.86
78 79 2.005451 CTGGAAATTGCGAGTCTCCAG 58.995 52.381 14.20 14.20 45.28 3.86
79 80 1.347707 ACTGGAAATTGCGAGTCTCCA 59.652 47.619 0.00 0.00 34.97 3.86
80 81 2.100605 ACTGGAAATTGCGAGTCTCC 57.899 50.000 0.00 0.00 0.00 3.71
81 82 2.599082 CGTACTGGAAATTGCGAGTCTC 59.401 50.000 4.06 0.00 0.00 3.36
82 83 2.029290 ACGTACTGGAAATTGCGAGTCT 60.029 45.455 4.06 0.00 0.00 3.24
83 84 2.334838 ACGTACTGGAAATTGCGAGTC 58.665 47.619 4.06 0.00 0.00 3.36
84 85 2.334838 GACGTACTGGAAATTGCGAGT 58.665 47.619 6.33 6.33 0.00 4.18
85 86 1.320555 CGACGTACTGGAAATTGCGAG 59.679 52.381 0.00 0.00 0.00 5.03
86 87 1.068402 TCGACGTACTGGAAATTGCGA 60.068 47.619 0.00 0.00 0.00 5.10
87 88 1.058695 GTCGACGTACTGGAAATTGCG 59.941 52.381 0.00 0.00 0.00 4.85
88 89 2.063266 TGTCGACGTACTGGAAATTGC 58.937 47.619 11.62 0.00 0.00 3.56
89 90 4.921470 ATTGTCGACGTACTGGAAATTG 57.079 40.909 11.62 0.00 0.00 2.32
90 91 5.934935 AAATTGTCGACGTACTGGAAATT 57.065 34.783 11.62 5.79 0.00 1.82
91 92 6.392354 TCTAAATTGTCGACGTACTGGAAAT 58.608 36.000 11.62 0.00 0.00 2.17
92 93 5.771469 TCTAAATTGTCGACGTACTGGAAA 58.229 37.500 11.62 0.00 0.00 3.13
93 94 5.375417 TCTAAATTGTCGACGTACTGGAA 57.625 39.130 11.62 0.00 0.00 3.53
94 95 5.106038 ACATCTAAATTGTCGACGTACTGGA 60.106 40.000 11.62 5.85 0.00 3.86
95 96 5.100259 ACATCTAAATTGTCGACGTACTGG 58.900 41.667 11.62 0.20 0.00 4.00
96 97 5.229469 GGACATCTAAATTGTCGACGTACTG 59.771 44.000 11.62 3.05 43.53 2.74
97 98 5.106038 TGGACATCTAAATTGTCGACGTACT 60.106 40.000 11.62 0.00 43.53 2.73
98 99 5.097529 TGGACATCTAAATTGTCGACGTAC 58.902 41.667 11.62 0.32 43.53 3.67
99 100 5.313520 TGGACATCTAAATTGTCGACGTA 57.686 39.130 11.62 1.43 43.53 3.57
100 101 4.182693 TGGACATCTAAATTGTCGACGT 57.817 40.909 11.62 0.00 43.53 4.34
101 102 5.524511 TTTGGACATCTAAATTGTCGACG 57.475 39.130 11.62 0.00 43.53 5.12
102 103 7.072177 TCATTTGGACATCTAAATTGTCGAC 57.928 36.000 9.11 9.11 43.53 4.20
103 104 7.770433 AGATCATTTGGACATCTAAATTGTCGA 59.230 33.333 0.83 0.00 43.53 4.20
104 105 7.923888 AGATCATTTGGACATCTAAATTGTCG 58.076 34.615 0.83 0.00 43.53 4.35
111 112 9.481340 CGATTTCTAGATCATTTGGACATCTAA 57.519 33.333 0.00 0.00 30.45 2.10
112 113 8.860088 TCGATTTCTAGATCATTTGGACATCTA 58.140 33.333 0.00 0.00 0.00 1.98
113 114 7.730084 TCGATTTCTAGATCATTTGGACATCT 58.270 34.615 0.00 0.00 0.00 2.90
114 115 7.953158 TCGATTTCTAGATCATTTGGACATC 57.047 36.000 0.00 0.00 0.00 3.06
115 116 7.041508 GCTTCGATTTCTAGATCATTTGGACAT 60.042 37.037 0.00 0.00 0.00 3.06
116 117 6.258727 GCTTCGATTTCTAGATCATTTGGACA 59.741 38.462 0.00 0.00 0.00 4.02
117 118 6.258727 TGCTTCGATTTCTAGATCATTTGGAC 59.741 38.462 0.00 0.00 0.00 4.02
118 119 6.348498 TGCTTCGATTTCTAGATCATTTGGA 58.652 36.000 0.00 0.00 0.00 3.53
119 120 6.481313 TCTGCTTCGATTTCTAGATCATTTGG 59.519 38.462 0.00 0.00 0.00 3.28
120 121 7.343691 GTCTGCTTCGATTTCTAGATCATTTG 58.656 38.462 0.00 0.00 0.00 2.32
121 122 6.481644 GGTCTGCTTCGATTTCTAGATCATTT 59.518 38.462 0.00 0.00 0.00 2.32
122 123 5.988561 GGTCTGCTTCGATTTCTAGATCATT 59.011 40.000 0.00 0.00 0.00 2.57
123 124 5.304101 AGGTCTGCTTCGATTTCTAGATCAT 59.696 40.000 0.00 0.00 0.00 2.45
124 125 4.646945 AGGTCTGCTTCGATTTCTAGATCA 59.353 41.667 0.00 0.00 0.00 2.92
125 126 5.195001 AGGTCTGCTTCGATTTCTAGATC 57.805 43.478 0.00 0.00 0.00 2.75
126 127 4.646945 TGAGGTCTGCTTCGATTTCTAGAT 59.353 41.667 0.00 0.00 0.00 1.98
127 128 4.017126 TGAGGTCTGCTTCGATTTCTAGA 58.983 43.478 0.00 0.00 0.00 2.43
128 129 4.377839 TGAGGTCTGCTTCGATTTCTAG 57.622 45.455 0.00 0.00 0.00 2.43
129 130 4.686972 CATGAGGTCTGCTTCGATTTCTA 58.313 43.478 0.00 0.00 0.00 2.10
130 131 3.529533 CATGAGGTCTGCTTCGATTTCT 58.470 45.455 0.00 0.00 0.00 2.52
131 132 2.031437 GCATGAGGTCTGCTTCGATTTC 59.969 50.000 0.00 0.00 36.68 2.17
132 133 2.012673 GCATGAGGTCTGCTTCGATTT 58.987 47.619 0.00 0.00 36.68 2.17
133 134 1.065926 TGCATGAGGTCTGCTTCGATT 60.066 47.619 0.00 0.00 40.34 3.34
134 135 0.538584 TGCATGAGGTCTGCTTCGAT 59.461 50.000 0.00 0.00 40.34 3.59
135 136 0.321346 TTGCATGAGGTCTGCTTCGA 59.679 50.000 0.00 0.00 40.34 3.71
136 137 1.376543 ATTGCATGAGGTCTGCTTCG 58.623 50.000 0.00 0.00 40.34 3.79
137 138 4.970662 TTTATTGCATGAGGTCTGCTTC 57.029 40.909 0.00 0.00 40.34 3.86
138 139 5.927281 AATTTATTGCATGAGGTCTGCTT 57.073 34.783 0.00 0.00 40.34 3.91
139 140 7.002879 AGATAATTTATTGCATGAGGTCTGCT 58.997 34.615 0.00 0.00 40.34 4.24
140 141 7.211966 AGATAATTTATTGCATGAGGTCTGC 57.788 36.000 0.00 0.00 40.10 4.26
141 142 9.276590 TGTAGATAATTTATTGCATGAGGTCTG 57.723 33.333 0.00 0.00 0.00 3.51
142 143 9.851686 TTGTAGATAATTTATTGCATGAGGTCT 57.148 29.630 0.00 0.00 0.00 3.85
204 205 8.924303 GCCCATACTTATATATACATGGTCAGA 58.076 37.037 17.82 0.00 32.70 3.27
205 206 8.704668 TGCCCATACTTATATATACATGGTCAG 58.295 37.037 17.82 5.59 32.70 3.51
206 207 8.482943 GTGCCCATACTTATATATACATGGTCA 58.517 37.037 17.82 12.68 32.70 4.02
207 208 7.931948 GGTGCCCATACTTATATATACATGGTC 59.068 40.741 17.82 11.03 32.70 4.02
208 209 7.418597 CGGTGCCCATACTTATATATACATGGT 60.419 40.741 17.82 8.27 32.70 3.55
209 210 6.929049 CGGTGCCCATACTTATATATACATGG 59.071 42.308 14.81 14.81 34.07 3.66
210 211 7.722363 TCGGTGCCCATACTTATATATACATG 58.278 38.462 0.00 0.00 0.00 3.21
211 212 7.907841 TCGGTGCCCATACTTATATATACAT 57.092 36.000 0.00 0.00 0.00 2.29
212 213 7.721409 TTCGGTGCCCATACTTATATATACA 57.279 36.000 0.00 0.00 0.00 2.29
213 214 7.594015 CGATTCGGTGCCCATACTTATATATAC 59.406 40.741 0.00 0.00 0.00 1.47
214 215 7.654568 CGATTCGGTGCCCATACTTATATATA 58.345 38.462 0.00 0.00 0.00 0.86
215 216 6.513180 CGATTCGGTGCCCATACTTATATAT 58.487 40.000 0.00 0.00 0.00 0.86
216 217 5.680408 GCGATTCGGTGCCCATACTTATATA 60.680 44.000 8.34 0.00 0.00 0.86
217 218 4.755411 CGATTCGGTGCCCATACTTATAT 58.245 43.478 0.00 0.00 0.00 0.86
218 219 3.615592 GCGATTCGGTGCCCATACTTATA 60.616 47.826 8.34 0.00 0.00 0.98
219 220 2.870435 GCGATTCGGTGCCCATACTTAT 60.870 50.000 8.34 0.00 0.00 1.73
220 221 1.539496 GCGATTCGGTGCCCATACTTA 60.539 52.381 8.34 0.00 0.00 2.24
221 222 0.814010 GCGATTCGGTGCCCATACTT 60.814 55.000 8.34 0.00 0.00 2.24
222 223 1.227556 GCGATTCGGTGCCCATACT 60.228 57.895 8.34 0.00 0.00 2.12
223 224 1.227556 AGCGATTCGGTGCCCATAC 60.228 57.895 10.37 0.00 35.85 2.39
224 225 3.226242 AGCGATTCGGTGCCCATA 58.774 55.556 10.37 0.00 35.85 2.74
231 232 0.391661 ATCAAGTGCAGCGATTCGGT 60.392 50.000 4.68 4.68 38.40 4.69
232 233 1.570813 TATCAAGTGCAGCGATTCGG 58.429 50.000 8.34 0.00 0.00 4.30
233 234 3.867055 ATTATCAAGTGCAGCGATTCG 57.133 42.857 0.62 0.62 0.00 3.34
234 235 6.292389 ACTTATTATCAAGTGCAGCGATTC 57.708 37.500 0.00 0.00 37.37 2.52
235 236 5.237344 GGACTTATTATCAAGTGCAGCGATT 59.763 40.000 3.06 0.00 43.91 3.34
236 237 4.752101 GGACTTATTATCAAGTGCAGCGAT 59.248 41.667 3.06 0.00 43.91 4.58
237 238 4.119862 GGACTTATTATCAAGTGCAGCGA 58.880 43.478 3.06 0.00 43.91 4.93
238 239 3.248602 GGGACTTATTATCAAGTGCAGCG 59.751 47.826 9.26 0.00 45.63 5.18
239 240 4.455606 AGGGACTTATTATCAAGTGCAGC 58.544 43.478 9.26 0.00 45.63 5.25
255 256 1.812113 TTCTCCTCCGGGAAGGGACT 61.812 60.000 9.25 0.00 41.69 3.85
256 257 1.305887 TTCTCCTCCGGGAAGGGAC 60.306 63.158 9.25 0.00 41.69 4.46
257 258 1.305887 GTTCTCCTCCGGGAAGGGA 60.306 63.158 9.25 5.04 41.69 4.20
258 259 0.910088 AAGTTCTCCTCCGGGAAGGG 60.910 60.000 9.25 0.00 41.69 3.95
259 260 0.984995 AAAGTTCTCCTCCGGGAAGG 59.015 55.000 0.00 1.15 41.69 3.46
260 261 2.427506 CAAAAGTTCTCCTCCGGGAAG 58.572 52.381 0.00 0.00 41.69 3.46
261 262 1.073284 CCAAAAGTTCTCCTCCGGGAA 59.927 52.381 0.00 0.00 41.69 3.97
262 263 0.690762 CCAAAAGTTCTCCTCCGGGA 59.309 55.000 0.00 0.00 39.70 5.14
263 264 0.400594 ACCAAAAGTTCTCCTCCGGG 59.599 55.000 0.00 0.00 0.00 5.73
264 265 1.202770 ACACCAAAAGTTCTCCTCCGG 60.203 52.381 0.00 0.00 0.00 5.14
265 266 2.256117 ACACCAAAAGTTCTCCTCCG 57.744 50.000 0.00 0.00 0.00 4.63
266 267 4.010349 CCATACACCAAAAGTTCTCCTCC 58.990 47.826 0.00 0.00 0.00 4.30
267 268 4.010349 CCCATACACCAAAAGTTCTCCTC 58.990 47.826 0.00 0.00 0.00 3.71
268 269 3.245264 CCCCATACACCAAAAGTTCTCCT 60.245 47.826 0.00 0.00 0.00 3.69
269 270 3.089284 CCCCATACACCAAAAGTTCTCC 58.911 50.000 0.00 0.00 0.00 3.71
270 271 3.756963 GTCCCCATACACCAAAAGTTCTC 59.243 47.826 0.00 0.00 0.00 2.87
271 272 3.139397 TGTCCCCATACACCAAAAGTTCT 59.861 43.478 0.00 0.00 0.00 3.01
272 273 3.492337 TGTCCCCATACACCAAAAGTTC 58.508 45.455 0.00 0.00 0.00 3.01
273 274 3.603965 TGTCCCCATACACCAAAAGTT 57.396 42.857 0.00 0.00 0.00 2.66
274 275 3.825908 ATGTCCCCATACACCAAAAGT 57.174 42.857 0.00 0.00 30.75 2.66
275 276 4.037923 GCATATGTCCCCATACACCAAAAG 59.962 45.833 4.29 0.00 36.40 2.27
276 277 3.957497 GCATATGTCCCCATACACCAAAA 59.043 43.478 4.29 0.00 36.40 2.44
277 278 3.053320 TGCATATGTCCCCATACACCAAA 60.053 43.478 4.29 0.00 36.40 3.28
278 279 2.511637 TGCATATGTCCCCATACACCAA 59.488 45.455 4.29 0.00 36.40 3.67
279 280 2.131023 TGCATATGTCCCCATACACCA 58.869 47.619 4.29 0.00 36.40 4.17
280 281 2.504367 GTGCATATGTCCCCATACACC 58.496 52.381 4.29 0.00 36.40 4.16
281 282 2.504367 GGTGCATATGTCCCCATACAC 58.496 52.381 4.29 1.26 36.40 2.90
282 283 1.423541 GGGTGCATATGTCCCCATACA 59.576 52.381 20.72 0.21 36.40 2.29
283 284 1.705186 AGGGTGCATATGTCCCCATAC 59.295 52.381 24.95 8.49 41.95 2.39
284 285 2.132303 AGGGTGCATATGTCCCCATA 57.868 50.000 24.95 0.00 41.95 2.74
285 286 2.132303 TAGGGTGCATATGTCCCCAT 57.868 50.000 24.95 14.11 41.95 4.00
286 287 2.132303 ATAGGGTGCATATGTCCCCA 57.868 50.000 24.95 17.03 41.95 4.96
287 288 5.216622 TCTATATAGGGTGCATATGTCCCC 58.783 45.833 24.48 21.88 41.95 4.81
288 289 7.380423 AATCTATATAGGGTGCATATGTCCC 57.620 40.000 22.23 22.23 41.36 4.46
289 290 9.686683 AAAAATCTATATAGGGTGCATATGTCC 57.313 33.333 9.89 7.47 0.00 4.02
321 322 9.650371 GGAATTTTTGACTTTTTGCTGAATTAC 57.350 29.630 0.00 0.00 0.00 1.89
322 323 9.612066 AGGAATTTTTGACTTTTTGCTGAATTA 57.388 25.926 0.00 0.00 0.00 1.40
323 324 8.400186 CAGGAATTTTTGACTTTTTGCTGAATT 58.600 29.630 0.00 0.00 37.79 2.17
324 325 7.769970 TCAGGAATTTTTGACTTTTTGCTGAAT 59.230 29.630 3.21 0.00 40.35 2.57
325 326 7.102346 TCAGGAATTTTTGACTTTTTGCTGAA 58.898 30.769 3.21 0.00 40.35 3.02
326 327 6.638610 TCAGGAATTTTTGACTTTTTGCTGA 58.361 32.000 1.75 1.75 40.80 4.26
327 328 6.907206 TCAGGAATTTTTGACTTTTTGCTG 57.093 33.333 0.00 0.00 37.17 4.41
328 329 7.920160 TTTCAGGAATTTTTGACTTTTTGCT 57.080 28.000 0.00 0.00 0.00 3.91
358 359 9.280174 ACAATAGAAGGTCGAGTTTATTTCAAA 57.720 29.630 0.00 0.00 0.00 2.69
359 360 8.842358 ACAATAGAAGGTCGAGTTTATTTCAA 57.158 30.769 0.00 0.00 0.00 2.69
360 361 9.362539 GTACAATAGAAGGTCGAGTTTATTTCA 57.637 33.333 0.00 0.00 0.00 2.69
361 362 9.583765 AGTACAATAGAAGGTCGAGTTTATTTC 57.416 33.333 0.00 0.00 0.00 2.17
362 363 9.583765 GAGTACAATAGAAGGTCGAGTTTATTT 57.416 33.333 0.00 0.00 0.00 1.40
363 364 7.914346 CGAGTACAATAGAAGGTCGAGTTTATT 59.086 37.037 0.00 0.00 0.00 1.40
364 365 7.066766 ACGAGTACAATAGAAGGTCGAGTTTAT 59.933 37.037 0.00 0.00 0.00 1.40
365 366 6.372659 ACGAGTACAATAGAAGGTCGAGTTTA 59.627 38.462 0.00 0.00 0.00 2.01
366 367 5.182760 ACGAGTACAATAGAAGGTCGAGTTT 59.817 40.000 0.00 0.00 0.00 2.66
367 368 4.699257 ACGAGTACAATAGAAGGTCGAGTT 59.301 41.667 0.00 0.00 0.00 3.01
368 369 4.094590 CACGAGTACAATAGAAGGTCGAGT 59.905 45.833 0.00 0.00 0.00 4.18
369 370 4.331992 TCACGAGTACAATAGAAGGTCGAG 59.668 45.833 0.00 0.00 0.00 4.04
370 371 4.256110 TCACGAGTACAATAGAAGGTCGA 58.744 43.478 0.00 0.00 0.00 4.20
371 372 4.331992 TCTCACGAGTACAATAGAAGGTCG 59.668 45.833 0.00 0.00 0.00 4.79
372 373 5.814764 TCTCACGAGTACAATAGAAGGTC 57.185 43.478 0.00 0.00 0.00 3.85
373 374 6.585695 TTTCTCACGAGTACAATAGAAGGT 57.414 37.500 0.00 0.00 0.00 3.50
374 375 9.582431 TTTATTTCTCACGAGTACAATAGAAGG 57.418 33.333 0.00 0.00 0.00 3.46
379 380 9.878667 TGGATTTTATTTCTCACGAGTACAATA 57.121 29.630 0.00 0.00 0.00 1.90
380 381 8.786826 TGGATTTTATTTCTCACGAGTACAAT 57.213 30.769 0.00 0.00 0.00 2.71
381 382 8.610248 TTGGATTTTATTTCTCACGAGTACAA 57.390 30.769 0.00 0.00 0.00 2.41
382 383 8.610248 TTTGGATTTTATTTCTCACGAGTACA 57.390 30.769 0.00 0.00 0.00 2.90
383 384 9.887406 TTTTTGGATTTTATTTCTCACGAGTAC 57.113 29.630 0.00 0.00 0.00 2.73
445 446 8.081633 CACTATTCACACTATTTCAGCCAAAAA 58.918 33.333 0.00 0.00 0.00 1.94
446 447 7.446931 TCACTATTCACACTATTTCAGCCAAAA 59.553 33.333 0.00 0.00 0.00 2.44
447 448 6.939730 TCACTATTCACACTATTTCAGCCAAA 59.060 34.615 0.00 0.00 0.00 3.28
448 449 6.371548 GTCACTATTCACACTATTTCAGCCAA 59.628 38.462 0.00 0.00 0.00 4.52
449 450 5.874810 GTCACTATTCACACTATTTCAGCCA 59.125 40.000 0.00 0.00 0.00 4.75
450 451 5.294552 GGTCACTATTCACACTATTTCAGCC 59.705 44.000 0.00 0.00 0.00 4.85
451 452 6.109359 AGGTCACTATTCACACTATTTCAGC 58.891 40.000 0.00 0.00 0.00 4.26
459 460 9.656323 TTCCTATTATAGGTCACTATTCACACT 57.344 33.333 16.94 0.00 46.32 3.55
499 500 7.222000 ACAAAAGTTGACCTCACAGTAAAAA 57.778 32.000 0.00 0.00 0.00 1.94
500 501 6.827586 ACAAAAGTTGACCTCACAGTAAAA 57.172 33.333 0.00 0.00 0.00 1.52
501 502 8.514330 AATACAAAAGTTGACCTCACAGTAAA 57.486 30.769 0.00 0.00 0.00 2.01
502 503 8.514330 AAATACAAAAGTTGACCTCACAGTAA 57.486 30.769 0.00 0.00 0.00 2.24
503 504 8.514330 AAAATACAAAAGTTGACCTCACAGTA 57.486 30.769 0.00 0.00 0.00 2.74
504 505 7.404671 AAAATACAAAAGTTGACCTCACAGT 57.595 32.000 0.00 0.00 0.00 3.55
528 529 9.805966 GCATTGATATATAAATGTCGACGAAAA 57.194 29.630 19.81 0.00 36.39 2.29
529 530 8.983724 TGCATTGATATATAAATGTCGACGAAA 58.016 29.630 19.81 0.00 36.39 3.46
530 531 8.527567 TGCATTGATATATAAATGTCGACGAA 57.472 30.769 19.81 0.00 36.39 3.85
531 532 8.527567 TTGCATTGATATATAAATGTCGACGA 57.472 30.769 19.81 0.00 36.39 4.20
532 533 9.592720 TTTTGCATTGATATATAAATGTCGACG 57.407 29.630 19.81 0.00 36.39 5.12
545 546 8.796475 ACACTTGACTTACTTTTGCATTGATAT 58.204 29.630 0.00 0.00 0.00 1.63
546 547 8.165239 ACACTTGACTTACTTTTGCATTGATA 57.835 30.769 0.00 0.00 0.00 2.15
547 548 7.042797 ACACTTGACTTACTTTTGCATTGAT 57.957 32.000 0.00 0.00 0.00 2.57
548 549 6.449635 ACACTTGACTTACTTTTGCATTGA 57.550 33.333 0.00 0.00 0.00 2.57
549 550 7.524294 AAACACTTGACTTACTTTTGCATTG 57.476 32.000 0.00 0.00 0.00 2.82
550 551 7.602265 ACAAAACACTTGACTTACTTTTGCATT 59.398 29.630 0.00 0.00 33.72 3.56
551 552 7.096551 ACAAAACACTTGACTTACTTTTGCAT 58.903 30.769 0.00 0.00 33.72 3.96
552 553 6.451393 ACAAAACACTTGACTTACTTTTGCA 58.549 32.000 0.00 0.00 33.72 4.08
553 554 6.034577 GGACAAAACACTTGACTTACTTTTGC 59.965 38.462 0.00 0.00 33.72 3.68
554 555 7.087639 TGGACAAAACACTTGACTTACTTTTG 58.912 34.615 0.00 0.00 35.61 2.44
555 556 7.222000 TGGACAAAACACTTGACTTACTTTT 57.778 32.000 0.00 0.00 0.00 2.27
556 557 6.827586 TGGACAAAACACTTGACTTACTTT 57.172 33.333 0.00 0.00 0.00 2.66
557 558 6.827586 TTGGACAAAACACTTGACTTACTT 57.172 33.333 0.00 0.00 0.00 2.24
558 559 6.827586 TTTGGACAAAACACTTGACTTACT 57.172 33.333 0.00 0.00 0.00 2.24
559 560 8.403236 ACTATTTGGACAAAACACTTGACTTAC 58.597 33.333 1.17 0.00 33.56 2.34
560 561 8.514330 ACTATTTGGACAAAACACTTGACTTA 57.486 30.769 1.17 0.00 33.56 2.24
561 562 7.404671 ACTATTTGGACAAAACACTTGACTT 57.595 32.000 1.17 0.00 33.56 3.01
562 563 7.339466 AGAACTATTTGGACAAAACACTTGACT 59.661 33.333 1.17 0.00 33.56 3.41
563 564 7.480810 AGAACTATTTGGACAAAACACTTGAC 58.519 34.615 1.17 0.00 33.56 3.18
564 565 7.639113 AGAACTATTTGGACAAAACACTTGA 57.361 32.000 1.17 0.00 33.56 3.02
565 566 9.233232 GTAAGAACTATTTGGACAAAACACTTG 57.767 33.333 1.17 0.00 33.56 3.16
566 567 8.410912 GGTAAGAACTATTTGGACAAAACACTT 58.589 33.333 1.17 6.48 33.56 3.16
567 568 7.778382 AGGTAAGAACTATTTGGACAAAACACT 59.222 33.333 1.17 0.00 33.56 3.55
568 569 7.937649 AGGTAAGAACTATTTGGACAAAACAC 58.062 34.615 1.17 0.00 33.56 3.32
569 570 9.802039 ATAGGTAAGAACTATTTGGACAAAACA 57.198 29.630 1.17 0.00 33.56 2.83
624 625 9.896645 CTTTGTATATGCACCTTATATGAGGAT 57.103 33.333 19.88 6.06 39.25 3.24
625 626 8.880244 ACTTTGTATATGCACCTTATATGAGGA 58.120 33.333 19.88 0.00 39.25 3.71
626 627 8.939929 CACTTTGTATATGCACCTTATATGAGG 58.060 37.037 11.91 11.91 42.75 3.86
627 628 9.494271 ACACTTTGTATATGCACCTTATATGAG 57.506 33.333 0.00 0.00 0.00 2.90
633 634 9.116067 GGAAATACACTTTGTATATGCACCTTA 57.884 33.333 0.00 0.00 42.29 2.69
634 635 7.068226 GGGAAATACACTTTGTATATGCACCTT 59.932 37.037 0.00 0.00 42.29 3.50
635 636 6.546034 GGGAAATACACTTTGTATATGCACCT 59.454 38.462 0.00 0.00 42.29 4.00
636 637 6.512741 CGGGAAATACACTTTGTATATGCACC 60.513 42.308 0.00 0.00 42.29 5.01
637 638 6.037830 ACGGGAAATACACTTTGTATATGCAC 59.962 38.462 0.00 0.00 42.29 4.57
638 639 6.116806 ACGGGAAATACACTTTGTATATGCA 58.883 36.000 0.00 0.00 42.29 3.96
639 640 6.482308 AGACGGGAAATACACTTTGTATATGC 59.518 38.462 0.00 0.00 42.29 3.14
640 641 7.926555 AGAGACGGGAAATACACTTTGTATATG 59.073 37.037 0.00 0.00 42.29 1.78
641 642 8.019656 AGAGACGGGAAATACACTTTGTATAT 57.980 34.615 0.00 0.00 42.29 0.86
642 643 7.414222 AGAGACGGGAAATACACTTTGTATA 57.586 36.000 0.00 0.00 42.29 1.47
643 644 6.295719 AGAGACGGGAAATACACTTTGTAT 57.704 37.500 0.00 0.00 44.79 2.29
644 645 5.733620 AGAGACGGGAAATACACTTTGTA 57.266 39.130 0.00 0.00 37.24 2.41
645 646 4.618920 AGAGACGGGAAATACACTTTGT 57.381 40.909 0.00 0.00 0.00 2.83
646 647 4.392138 GGAAGAGACGGGAAATACACTTTG 59.608 45.833 0.00 0.00 0.00 2.77
647 648 4.565028 GGGAAGAGACGGGAAATACACTTT 60.565 45.833 0.00 0.00 0.00 2.66
648 649 3.055312 GGGAAGAGACGGGAAATACACTT 60.055 47.826 0.00 0.00 0.00 3.16
649 650 2.500504 GGGAAGAGACGGGAAATACACT 59.499 50.000 0.00 0.00 0.00 3.55
650 651 2.737679 CGGGAAGAGACGGGAAATACAC 60.738 54.545 0.00 0.00 0.00 2.90
651 652 1.479323 CGGGAAGAGACGGGAAATACA 59.521 52.381 0.00 0.00 0.00 2.29
652 653 1.479730 ACGGGAAGAGACGGGAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
653 654 1.479323 CACGGGAAGAGACGGGAAATA 59.521 52.381 0.00 0.00 35.00 1.40
654 655 0.249398 CACGGGAAGAGACGGGAAAT 59.751 55.000 0.00 0.00 35.00 2.17
655 656 1.117142 ACACGGGAAGAGACGGGAAA 61.117 55.000 0.00 0.00 36.89 3.13
656 657 1.117142 AACACGGGAAGAGACGGGAA 61.117 55.000 0.00 0.00 36.89 3.97
657 658 0.251297 TAACACGGGAAGAGACGGGA 60.251 55.000 0.00 0.00 36.89 5.14
658 659 0.604578 TTAACACGGGAAGAGACGGG 59.395 55.000 0.00 0.00 39.87 5.28
659 660 2.443887 TTTAACACGGGAAGAGACGG 57.556 50.000 0.00 0.00 0.00 4.79
660 661 4.053295 TCTTTTTAACACGGGAAGAGACG 58.947 43.478 0.00 0.00 0.00 4.18
664 665 6.824704 TCTCTTTTCTTTTTAACACGGGAAGA 59.175 34.615 0.00 0.00 0.00 2.87
713 718 1.067916 CACAAACAAGCCCTGCACC 59.932 57.895 0.00 0.00 0.00 5.01
715 720 2.795110 GGCACAAACAAGCCCTGCA 61.795 57.895 0.00 0.00 45.18 4.41
887 910 1.660019 TTTTGTTGGGGCTCAGGGGA 61.660 55.000 0.00 0.00 0.00 4.81
895 918 3.147132 CCTGGGTTTTGTTGGGGC 58.853 61.111 0.00 0.00 0.00 5.80
926 1845 1.579429 GTGTGATTTGGGTGGCGAC 59.421 57.895 0.00 0.00 0.00 5.19
987 1912 3.878667 GCCATCGGGGGAAGAGGG 61.879 72.222 0.00 0.00 41.99 4.30
1302 2254 4.464947 CCTTCTTCTTGGACTTCTTGGTT 58.535 43.478 0.00 0.00 0.00 3.67
1770 2722 1.357137 TGTACACCTTGGAGCCATCA 58.643 50.000 0.00 0.00 0.00 3.07
1813 3697 4.111577 TCTCCTTCACCATACCCTTCATT 58.888 43.478 0.00 0.00 0.00 2.57
1821 3705 4.282195 CCTAGGACATCTCCTTCACCATAC 59.718 50.000 1.05 0.00 45.77 2.39
1842 3726 2.843113 AGGCAGAGAAATGTAGAAGCCT 59.157 45.455 0.00 0.00 45.71 4.58
1950 3834 0.806492 GAACTGGATCCGGCGTCTTC 60.806 60.000 21.17 12.64 0.00 2.87
2089 3979 9.507329 AAAATCGAGTAGCCATATATTCACAAT 57.493 29.630 0.00 0.00 0.00 2.71
2090 3980 8.773645 CAAAATCGAGTAGCCATATATTCACAA 58.226 33.333 0.00 0.00 0.00 3.33
2092 3982 8.311650 ACAAAATCGAGTAGCCATATATTCAC 57.688 34.615 0.00 0.00 0.00 3.18
2095 3985 9.944376 ACATACAAAATCGAGTAGCCATATATT 57.056 29.630 0.00 0.00 0.00 1.28
2098 3988 9.371136 CATACATACAAAATCGAGTAGCCATAT 57.629 33.333 0.00 0.00 0.00 1.78
2099 3989 8.364894 ACATACATACAAAATCGAGTAGCCATA 58.635 33.333 0.00 0.00 0.00 2.74
2100 3990 7.217200 ACATACATACAAAATCGAGTAGCCAT 58.783 34.615 0.00 0.00 0.00 4.40
2101 3991 6.578944 ACATACATACAAAATCGAGTAGCCA 58.421 36.000 0.00 0.00 0.00 4.75
2171 4066 7.093322 AGGACAAATGACAAATGAGATAAGC 57.907 36.000 0.00 0.00 0.00 3.09
2203 4098 2.224499 TGCTGCAGTTGTGAAGTATGGA 60.224 45.455 16.64 0.00 30.73 3.41
2208 4103 0.749091 TGCTGCTGCAGTTGTGAAGT 60.749 50.000 28.50 0.00 45.31 3.01
2239 4134 5.163322 ACAGAATGCACCCATTTCAAAAAGA 60.163 36.000 0.00 0.00 41.60 2.52
2265 4160 8.637986 ACTTGCATAAGTCATAAGGTTGAAAAA 58.362 29.630 0.00 0.00 43.53 1.94
2491 4386 1.743252 CCTTCCGCTCAGCTGGTTC 60.743 63.158 15.13 2.27 0.00 3.62
2512 4407 3.064931 CGGTCTTGTCCAGTTTCCTAAC 58.935 50.000 0.00 0.00 34.36 2.34
2522 4417 0.249573 GGTTCGTTCGGTCTTGTCCA 60.250 55.000 0.00 0.00 0.00 4.02
2528 4423 2.027003 TTGTTTGGTTCGTTCGGTCT 57.973 45.000 0.00 0.00 0.00 3.85
2559 4454 5.405571 GTGTCGCTTCTGATTCTTCTTTACA 59.594 40.000 0.00 0.00 0.00 2.41
2565 4460 4.327627 GGTAAGTGTCGCTTCTGATTCTTC 59.672 45.833 0.90 0.00 38.57 2.87
2593 4488 4.225492 TCAGGTAATGTAATGGGTTTCGGA 59.775 41.667 0.00 0.00 0.00 4.55
2678 4573 7.274603 CCTATTAGGTTGACTAGGTGACTAC 57.725 44.000 1.17 0.00 43.67 2.73
2833 4728 1.003769 GCAACTGCTGCGTTTTAGGC 61.004 55.000 7.04 4.98 42.37 3.93
2993 4888 2.433446 CACTGTGCAGAAGGGGCT 59.567 61.111 6.17 0.00 0.00 5.19
2994 4889 2.674380 CCACTGTGCAGAAGGGGC 60.674 66.667 4.70 0.00 0.00 5.80
3422 5323 2.224646 GGAGAAGTTGGAAGCAGGAAGT 60.225 50.000 0.00 0.00 0.00 3.01
3908 5814 5.726980 AATAATCAAGAAACCAGCAGCAA 57.273 34.783 0.00 0.00 0.00 3.91
4006 5912 7.276953 ACTTCGCAATGCAATTAATAAACAC 57.723 32.000 5.91 0.00 32.46 3.32
4019 5925 6.817270 ATTCATGAATAAACTTCGCAATGC 57.183 33.333 19.42 0.00 0.00 3.56
4086 5992 9.322773 GGTATGTTTATAACTCTGGTCCTAAAC 57.677 37.037 0.00 0.00 35.33 2.01
4137 6043 3.917329 TTTCACGTGTTCCAAACAACA 57.083 38.095 16.51 0.00 44.16 3.33
4307 6215 5.875359 AGCTTAGAACACAATGGTTAGCTAC 59.125 40.000 0.00 0.00 38.04 3.58
4315 6223 2.094545 GGCCAAGCTTAGAACACAATGG 60.095 50.000 0.00 0.00 0.00 3.16
4341 6249 4.159506 CGAATAGGCATTTCCCCTCAAAAA 59.840 41.667 0.00 0.00 33.88 1.94
4342 6250 3.699038 CGAATAGGCATTTCCCCTCAAAA 59.301 43.478 0.00 0.00 33.88 2.44
4343 6251 3.287222 CGAATAGGCATTTCCCCTCAAA 58.713 45.455 0.00 0.00 33.88 2.69
4344 6252 2.422803 CCGAATAGGCATTTCCCCTCAA 60.423 50.000 0.00 0.00 33.88 3.02
4345 6253 1.142870 CCGAATAGGCATTTCCCCTCA 59.857 52.381 0.00 0.00 33.88 3.86
4346 6254 1.897560 CCGAATAGGCATTTCCCCTC 58.102 55.000 0.00 0.00 33.88 4.30
4357 6265 3.963383 AAATAAAGTGCGCCGAATAGG 57.037 42.857 4.18 0.00 44.97 2.57
4358 6266 5.900339 TCTAAATAAAGTGCGCCGAATAG 57.100 39.130 4.18 0.00 0.00 1.73
4359 6267 5.277154 GCTTCTAAATAAAGTGCGCCGAATA 60.277 40.000 4.18 0.00 0.00 1.75
4360 6268 4.495844 GCTTCTAAATAAAGTGCGCCGAAT 60.496 41.667 4.18 0.00 0.00 3.34
4361 6269 3.181514 GCTTCTAAATAAAGTGCGCCGAA 60.182 43.478 4.18 0.00 0.00 4.30
4362 6270 2.350498 GCTTCTAAATAAAGTGCGCCGA 59.650 45.455 4.18 0.00 0.00 5.54
4363 6271 2.538939 GGCTTCTAAATAAAGTGCGCCG 60.539 50.000 4.18 0.00 0.00 6.46
4364 6272 2.422127 TGGCTTCTAAATAAAGTGCGCC 59.578 45.455 4.18 0.00 35.67 6.53
4365 6273 3.757745 TGGCTTCTAAATAAAGTGCGC 57.242 42.857 0.00 0.00 0.00 6.09
4366 6274 5.041951 TGTTGGCTTCTAAATAAAGTGCG 57.958 39.130 0.00 0.00 0.00 5.34
4367 6275 6.923508 ACTTTGTTGGCTTCTAAATAAAGTGC 59.076 34.615 8.77 0.00 42.48 4.40
4368 6276 8.871686 AACTTTGTTGGCTTCTAAATAAAGTG 57.128 30.769 9.90 0.00 42.94 3.16
4369 6277 9.961265 GTAACTTTGTTGGCTTCTAAATAAAGT 57.039 29.630 4.95 4.95 44.52 2.66
4370 6278 9.959749 TGTAACTTTGTTGGCTTCTAAATAAAG 57.040 29.630 0.00 0.00 39.21 1.85
4373 6281 9.290988 TGATGTAACTTTGTTGGCTTCTAAATA 57.709 29.630 0.00 0.00 0.00 1.40
4374 6282 8.177119 TGATGTAACTTTGTTGGCTTCTAAAT 57.823 30.769 0.00 0.00 0.00 1.40
4375 6283 7.575414 TGATGTAACTTTGTTGGCTTCTAAA 57.425 32.000 0.00 0.00 0.00 1.85
4376 6284 7.446931 TCATGATGTAACTTTGTTGGCTTCTAA 59.553 33.333 0.00 0.00 0.00 2.10
4377 6285 6.939730 TCATGATGTAACTTTGTTGGCTTCTA 59.060 34.615 0.00 0.00 0.00 2.10
4378 6286 5.769662 TCATGATGTAACTTTGTTGGCTTCT 59.230 36.000 0.00 0.00 0.00 2.85
4379 6287 6.012658 TCATGATGTAACTTTGTTGGCTTC 57.987 37.500 0.00 0.00 0.00 3.86
4380 6288 6.403866 TTCATGATGTAACTTTGTTGGCTT 57.596 33.333 0.00 0.00 0.00 4.35
4381 6289 6.594788 ATTCATGATGTAACTTTGTTGGCT 57.405 33.333 0.00 0.00 0.00 4.75
4382 6290 8.755696 TTTATTCATGATGTAACTTTGTTGGC 57.244 30.769 0.00 0.00 0.00 4.52
4406 6314 7.311092 CCCCCTAGTTTTTACTTCCATTTTT 57.689 36.000 0.00 0.00 0.00 1.94
4407 6315 6.928348 CCCCCTAGTTTTTACTTCCATTTT 57.072 37.500 0.00 0.00 0.00 1.82
4444 6352 9.831737 CATTCATGAGTCGAAGTCTTTTATTTT 57.168 29.630 0.00 0.00 0.00 1.82
4445 6353 9.003658 ACATTCATGAGTCGAAGTCTTTTATTT 57.996 29.630 0.00 0.00 0.00 1.40
4446 6354 8.553459 ACATTCATGAGTCGAAGTCTTTTATT 57.447 30.769 0.00 0.00 0.00 1.40
4447 6355 8.553459 AACATTCATGAGTCGAAGTCTTTTAT 57.447 30.769 0.00 0.00 0.00 1.40
4448 6356 7.962964 AACATTCATGAGTCGAAGTCTTTTA 57.037 32.000 0.00 0.00 0.00 1.52
4449 6357 6.867662 AACATTCATGAGTCGAAGTCTTTT 57.132 33.333 0.00 0.00 0.00 2.27
4450 6358 6.867662 AAACATTCATGAGTCGAAGTCTTT 57.132 33.333 0.00 0.00 0.00 2.52
4451 6359 6.662616 CAAAACATTCATGAGTCGAAGTCTT 58.337 36.000 0.00 0.00 0.00 3.01
4452 6360 5.334414 GCAAAACATTCATGAGTCGAAGTCT 60.334 40.000 0.00 0.00 0.00 3.24
4453 6361 4.848299 GCAAAACATTCATGAGTCGAAGTC 59.152 41.667 0.00 0.00 0.00 3.01
4454 6362 4.516698 AGCAAAACATTCATGAGTCGAAGT 59.483 37.500 0.00 0.00 0.00 3.01
4455 6363 5.039480 AGCAAAACATTCATGAGTCGAAG 57.961 39.130 0.00 0.00 0.00 3.79
4456 6364 6.204688 ACTTAGCAAAACATTCATGAGTCGAA 59.795 34.615 0.00 0.00 0.00 3.71
4457 6365 5.700832 ACTTAGCAAAACATTCATGAGTCGA 59.299 36.000 0.00 0.00 0.00 4.20
4458 6366 5.931532 ACTTAGCAAAACATTCATGAGTCG 58.068 37.500 0.00 0.00 0.00 4.18
4459 6367 7.141363 ACAACTTAGCAAAACATTCATGAGTC 58.859 34.615 0.00 0.00 0.00 3.36
4460 6368 7.042797 ACAACTTAGCAAAACATTCATGAGT 57.957 32.000 0.00 0.00 0.00 3.41
4461 6369 7.864379 AGAACAACTTAGCAAAACATTCATGAG 59.136 33.333 0.00 0.00 0.00 2.90
4462 6370 7.715657 AGAACAACTTAGCAAAACATTCATGA 58.284 30.769 0.00 0.00 0.00 3.07
4463 6371 7.935338 AGAACAACTTAGCAAAACATTCATG 57.065 32.000 0.00 0.00 0.00 3.07
4464 6372 9.683069 CTTAGAACAACTTAGCAAAACATTCAT 57.317 29.630 0.00 0.00 0.00 2.57
4465 6373 7.647715 GCTTAGAACAACTTAGCAAAACATTCA 59.352 33.333 0.00 0.00 46.48 2.57
4466 6374 7.997071 GCTTAGAACAACTTAGCAAAACATTC 58.003 34.615 0.00 0.00 46.48 2.67
4467 6375 7.930513 GCTTAGAACAACTTAGCAAAACATT 57.069 32.000 0.00 0.00 46.48 2.71
4476 6384 3.125316 CCGCCAAGCTTAGAACAACTTAG 59.875 47.826 0.00 0.00 0.00 2.18
4477 6385 3.071479 CCGCCAAGCTTAGAACAACTTA 58.929 45.455 0.00 0.00 0.00 2.24
4478 6386 1.880027 CCGCCAAGCTTAGAACAACTT 59.120 47.619 0.00 0.00 0.00 2.66
4479 6387 1.523758 CCGCCAAGCTTAGAACAACT 58.476 50.000 0.00 0.00 0.00 3.16
4480 6388 0.521735 CCCGCCAAGCTTAGAACAAC 59.478 55.000 0.00 0.00 0.00 3.32
4481 6389 1.241315 GCCCGCCAAGCTTAGAACAA 61.241 55.000 0.00 0.00 0.00 2.83
4482 6390 1.674322 GCCCGCCAAGCTTAGAACA 60.674 57.895 0.00 0.00 0.00 3.18
4483 6391 0.107848 TAGCCCGCCAAGCTTAGAAC 60.108 55.000 0.00 0.00 41.83 3.01
4484 6392 0.616371 TTAGCCCGCCAAGCTTAGAA 59.384 50.000 0.00 0.00 41.83 2.10
4485 6393 0.178068 CTTAGCCCGCCAAGCTTAGA 59.822 55.000 0.00 0.00 38.88 2.10
4486 6394 0.107654 ACTTAGCCCGCCAAGCTTAG 60.108 55.000 0.00 0.00 41.56 2.18
4554 6462 5.618418 CGTCCGAACCGCTATATAAAGATCA 60.618 44.000 0.00 0.00 0.00 2.92
4583 6491 1.667830 CGAGCACGGGAGCTGAAAA 60.668 57.895 3.97 0.00 46.75 2.29
4675 6583 3.133691 TCACACACTCAAGCAGCTTTAG 58.866 45.455 13.87 13.87 0.00 1.85
4681 6590 2.874086 TGAACATCACACACTCAAGCAG 59.126 45.455 0.00 0.00 0.00 4.24
4692 6601 5.010820 TCTGAAATTTGGCATGAACATCACA 59.989 36.000 0.00 0.00 0.00 3.58
4696 6605 9.675464 AAATATTCTGAAATTTGGCATGAACAT 57.325 25.926 0.00 0.00 0.00 2.71
4717 6626 9.125026 CCAAGAGCTACTTAAATGTCCAAATAT 57.875 33.333 0.00 0.00 37.03 1.28
4748 6657 3.502123 TCAGACCCCGAATTTGTCTTT 57.498 42.857 0.00 0.00 37.25 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.