Multiple sequence alignment - TraesCS5A01G130900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G130900 chr5A 100.000 4327 0 0 1 4327 294868060 294872386 0.000000e+00 7991
1 TraesCS5A01G130900 chr5A 99.001 1301 12 1 958 2258 600291071 600292370 0.000000e+00 2329
2 TraesCS5A01G130900 chr5A 95.668 277 11 1 1 276 527356521 527356797 1.100000e-120 444
3 TraesCS5A01G130900 chr5A 84.568 324 36 12 3553 3866 205012809 205013128 4.200000e-80 309
4 TraesCS5A01G130900 chr5D 95.993 2995 82 8 533 3498 220460292 220463277 0.000000e+00 4831
5 TraesCS5A01G130900 chr5D 82.927 246 36 6 3850 4089 227548277 227548032 2.620000e-52 217
6 TraesCS5A01G130900 chr5D 90.789 152 7 3 388 532 220433492 220433643 3.410000e-46 196
7 TraesCS5A01G130900 chr5D 91.597 119 7 2 279 397 220433358 220433473 1.250000e-35 161
8 TraesCS5A01G130900 chr5B 97.193 2565 70 2 992 3554 243359459 243362023 0.000000e+00 4337
9 TraesCS5A01G130900 chr5B 92.838 377 11 6 462 825 243358663 243359036 2.290000e-147 532
10 TraesCS5A01G130900 chr5B 89.810 422 30 7 3847 4263 243362040 243362453 2.960000e-146 529
11 TraesCS5A01G130900 chr5B 94.118 289 17 0 1 289 308226626 308226914 1.430000e-119 440
12 TraesCS5A01G130900 chr5B 84.365 307 43 3 3553 3854 303229099 303229405 3.270000e-76 296
13 TraesCS5A01G130900 chr5B 84.426 244 35 3 3849 4089 697503997 697504240 2.010000e-58 237
14 TraesCS5A01G130900 chr5B 83.267 251 32 8 3848 4089 557369462 557369711 5.630000e-54 222
15 TraesCS5A01G130900 chr5B 88.172 186 17 3 279 463 243356460 243356641 2.620000e-52 217
16 TraesCS5A01G130900 chr1B 99.149 1293 10 1 966 2258 688783638 688782347 0.000000e+00 2326
17 TraesCS5A01G130900 chr7B 96.786 280 8 1 1 279 489815780 489815501 2.360000e-127 466
18 TraesCS5A01G130900 chr1A 96.057 279 10 1 1 279 570224613 570224336 1.830000e-123 453
19 TraesCS5A01G130900 chr1A 93.836 292 16 2 1 292 559297101 559296812 5.140000e-119 438
20 TraesCS5A01G130900 chr3B 95.423 284 11 2 1 282 689001364 689001081 6.600000e-123 451
21 TraesCS5A01G130900 chr3B 83.987 306 42 6 3553 3854 812604156 812604458 1.970000e-73 287
22 TraesCS5A01G130900 chr3B 82.508 303 46 6 3552 3850 345998638 345998937 4.290000e-65 259
23 TraesCS5A01G130900 chr6B 95.357 280 13 0 1 280 626213104 626213383 3.070000e-121 446
24 TraesCS5A01G130900 chr2B 95.357 280 12 1 1 280 479849941 479849663 1.100000e-120 444
25 TraesCS5A01G130900 chr4A 94.286 280 16 0 1 280 94992412 94992691 3.090000e-116 429
26 TraesCS5A01G130900 chr6A 85.666 293 39 2 3564 3853 189538767 189538475 5.440000e-79 305
27 TraesCS5A01G130900 chr3D 83.486 327 44 7 3546 3865 28505063 28504740 3.270000e-76 296
28 TraesCS5A01G130900 chr3D 83.562 292 41 5 3566 3853 69501706 69501418 2.570000e-67 267
29 TraesCS5A01G130900 chr3D 82.680 306 48 4 3552 3853 239713038 239712734 2.570000e-67 267
30 TraesCS5A01G130900 chr4B 83.279 305 46 4 3553 3853 550398928 550398625 4.260000e-70 276
31 TraesCS5A01G130900 chr2D 85.603 257 25 8 3847 4093 548088525 548088271 4.290000e-65 259
32 TraesCS5A01G130900 chr2D 85.484 248 30 4 3847 4088 422303506 422303259 2.000000e-63 254
33 TraesCS5A01G130900 chr4D 85.484 248 30 3 3848 4089 173485959 173486206 2.000000e-63 254
34 TraesCS5A01G130900 chr7A 84.375 256 34 4 3847 4096 131840686 131840431 3.340000e-61 246
35 TraesCS5A01G130900 chr7D 84.146 246 33 3 3850 4089 33784332 33784087 2.600000e-57 233


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G130900 chr5A 294868060 294872386 4326 False 7991.00 7991 100.00000 1 4327 1 chr5A.!!$F2 4326
1 TraesCS5A01G130900 chr5A 600291071 600292370 1299 False 2329.00 2329 99.00100 958 2258 1 chr5A.!!$F4 1300
2 TraesCS5A01G130900 chr5D 220460292 220463277 2985 False 4831.00 4831 95.99300 533 3498 1 chr5D.!!$F1 2965
3 TraesCS5A01G130900 chr5B 243356460 243362453 5993 False 1403.75 4337 92.00325 279 4263 4 chr5B.!!$F5 3984
4 TraesCS5A01G130900 chr1B 688782347 688783638 1291 True 2326.00 2326 99.14900 966 2258 1 chr1B.!!$R1 1292

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
89 90 0.030369 GGTACGAGGCCTGACATACG 59.970 60.0 12.0 9.27 0.0 3.06 F
90 91 0.030369 GTACGAGGCCTGACATACGG 59.970 60.0 12.0 0.00 0.0 4.02 F
437 438 0.032130 GCACACGTCTTCTGTCAGGA 59.968 55.0 0.0 0.00 0.0 3.86 F
739 2768 0.036577 AGCATCCTGACTGACACTGC 60.037 55.0 0.0 0.00 0.0 4.40 F
930 2986 0.040646 ATTCCCTTTCCCGGTTTCCC 59.959 55.0 0.0 0.00 0.0 3.97 F
1395 3722 0.965866 TCTCCCGCAACGACATCTCT 60.966 55.0 0.0 0.00 0.0 3.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2564 4891 3.386768 TGGAGCGAGAATATGTTAGCC 57.613 47.619 0.00 0.00 0.00 3.93 R
2588 4915 2.473816 ACATCGTGTCAGACACTGTTG 58.526 47.619 27.42 24.12 46.46 3.33 R
2810 5137 2.104530 GCTAGGCCGAAGTCCGTC 59.895 66.667 9.55 0.00 36.31 4.79 R
3218 5545 0.385348 CGCTCTCGATCATCCTCACG 60.385 60.000 0.00 0.00 38.10 4.35 R
3278 5605 1.754234 GCCAATGGAGGGCGACATT 60.754 57.895 2.05 0.00 42.39 2.71 R
3827 6156 0.037697 CTCCGTCCGGTGAAATGTGA 60.038 55.000 0.00 0.00 36.47 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.559785 GTCTGGACCATGGCAACTG 58.440 57.895 13.04 6.56 37.61 3.16
27 28 1.303561 TCTGGACCATGGCAACTGC 60.304 57.895 13.04 0.00 41.14 4.40
28 29 2.672651 TGGACCATGGCAACTGCG 60.673 61.111 13.04 0.00 43.26 5.18
29 30 3.443045 GGACCATGGCAACTGCGG 61.443 66.667 13.04 0.00 43.26 5.69
30 31 3.443045 GACCATGGCAACTGCGGG 61.443 66.667 13.04 0.28 43.26 6.13
67 68 4.451150 GTCGCATGCGGGACCAGA 62.451 66.667 37.18 15.76 46.57 3.86
68 69 3.700970 TCGCATGCGGGACCAGAA 61.701 61.111 37.18 14.97 40.25 3.02
69 70 3.197790 CGCATGCGGGACCAGAAG 61.198 66.667 31.99 0.00 35.56 2.85
70 71 2.825836 GCATGCGGGACCAGAAGG 60.826 66.667 0.00 0.00 42.21 3.46
71 72 2.124570 CATGCGGGACCAGAAGGG 60.125 66.667 0.00 0.00 44.81 3.95
80 81 2.901042 CCAGAAGGGTACGAGGCC 59.099 66.667 0.00 0.00 0.00 5.19
81 82 1.686110 CCAGAAGGGTACGAGGCCT 60.686 63.158 3.86 3.86 0.00 5.19
82 83 1.517832 CAGAAGGGTACGAGGCCTG 59.482 63.158 12.00 5.11 0.00 4.85
83 84 0.970937 CAGAAGGGTACGAGGCCTGA 60.971 60.000 12.00 0.00 0.00 3.86
84 85 0.971447 AGAAGGGTACGAGGCCTGAC 60.971 60.000 12.00 5.04 0.00 3.51
85 86 1.229082 AAGGGTACGAGGCCTGACA 60.229 57.895 12.00 0.00 0.00 3.58
86 87 0.617820 AAGGGTACGAGGCCTGACAT 60.618 55.000 12.00 0.00 0.00 3.06
87 88 0.260816 AGGGTACGAGGCCTGACATA 59.739 55.000 12.00 0.00 0.00 2.29
88 89 0.388294 GGGTACGAGGCCTGACATAC 59.612 60.000 12.00 6.88 0.00 2.39
89 90 0.030369 GGTACGAGGCCTGACATACG 59.970 60.000 12.00 9.27 0.00 3.06
90 91 0.030369 GTACGAGGCCTGACATACGG 59.970 60.000 12.00 0.00 0.00 4.02
96 97 2.577059 CCTGACATACGGGCGTGT 59.423 61.111 0.00 0.00 38.29 4.49
97 98 1.809619 CCTGACATACGGGCGTGTG 60.810 63.158 0.00 0.00 41.90 3.82
98 99 1.809619 CTGACATACGGGCGTGTGG 60.810 63.158 0.00 0.00 40.75 4.17
99 100 2.510691 GACATACGGGCGTGTGGG 60.511 66.667 0.00 0.00 40.75 4.61
100 101 4.770874 ACATACGGGCGTGTGGGC 62.771 66.667 0.00 0.00 40.75 5.36
106 107 3.199891 GGGCGTGTGGGCGTTATC 61.200 66.667 0.00 0.00 43.46 1.75
107 108 2.435234 GGCGTGTGGGCGTTATCA 60.435 61.111 0.00 0.00 0.00 2.15
108 109 2.036006 GGCGTGTGGGCGTTATCAA 61.036 57.895 0.00 0.00 0.00 2.57
109 110 1.133869 GCGTGTGGGCGTTATCAAC 59.866 57.895 0.00 0.00 0.00 3.18
110 111 1.296056 GCGTGTGGGCGTTATCAACT 61.296 55.000 0.00 0.00 0.00 3.16
111 112 1.153353 CGTGTGGGCGTTATCAACTT 58.847 50.000 0.00 0.00 0.00 2.66
112 113 1.127951 CGTGTGGGCGTTATCAACTTC 59.872 52.381 0.00 0.00 0.00 3.01
113 114 1.127951 GTGTGGGCGTTATCAACTTCG 59.872 52.381 0.00 0.00 0.00 3.79
114 115 0.096454 GTGGGCGTTATCAACTTCGC 59.904 55.000 0.00 0.00 46.42 4.70
117 118 1.719709 GCGTTATCAACTTCGCCCC 59.280 57.895 0.00 0.00 42.33 5.80
118 119 1.712018 GCGTTATCAACTTCGCCCCC 61.712 60.000 0.00 0.00 42.33 5.40
119 120 0.391927 CGTTATCAACTTCGCCCCCA 60.392 55.000 0.00 0.00 0.00 4.96
120 121 1.092348 GTTATCAACTTCGCCCCCAC 58.908 55.000 0.00 0.00 0.00 4.61
121 122 0.391927 TTATCAACTTCGCCCCCACG 60.392 55.000 0.00 0.00 0.00 4.94
122 123 2.862674 TATCAACTTCGCCCCCACGC 62.863 60.000 0.00 0.00 0.00 5.34
141 142 2.770134 ACGCGTGTGAAAAGGTTCA 58.230 47.368 12.93 0.00 41.57 3.18
142 143 0.655733 ACGCGTGTGAAAAGGTTCAG 59.344 50.000 12.93 0.00 44.44 3.02
143 144 0.041312 CGCGTGTGAAAAGGTTCAGG 60.041 55.000 0.00 0.00 44.44 3.86
144 145 1.305201 GCGTGTGAAAAGGTTCAGGA 58.695 50.000 0.00 0.00 44.44 3.86
145 146 1.264288 GCGTGTGAAAAGGTTCAGGAG 59.736 52.381 0.00 0.00 44.44 3.69
146 147 1.873591 CGTGTGAAAAGGTTCAGGAGG 59.126 52.381 0.00 0.00 44.44 4.30
147 148 2.484770 CGTGTGAAAAGGTTCAGGAGGA 60.485 50.000 0.00 0.00 44.44 3.71
148 149 3.551846 GTGTGAAAAGGTTCAGGAGGAA 58.448 45.455 0.00 0.00 44.44 3.36
149 150 3.951680 GTGTGAAAAGGTTCAGGAGGAAA 59.048 43.478 0.00 0.00 44.44 3.13
150 151 4.401202 GTGTGAAAAGGTTCAGGAGGAAAA 59.599 41.667 0.00 0.00 44.44 2.29
151 152 5.020132 TGTGAAAAGGTTCAGGAGGAAAAA 58.980 37.500 0.00 0.00 44.44 1.94
172 173 4.789012 AAAAGATGTGTGTGGGCATTAG 57.211 40.909 0.00 0.00 0.00 1.73
173 174 3.439857 AAGATGTGTGTGGGCATTAGT 57.560 42.857 0.00 0.00 0.00 2.24
174 175 3.439857 AGATGTGTGTGGGCATTAGTT 57.560 42.857 0.00 0.00 0.00 2.24
175 176 3.084039 AGATGTGTGTGGGCATTAGTTG 58.916 45.455 0.00 0.00 0.00 3.16
176 177 2.356665 TGTGTGTGGGCATTAGTTGT 57.643 45.000 0.00 0.00 0.00 3.32
177 178 2.660572 TGTGTGTGGGCATTAGTTGTT 58.339 42.857 0.00 0.00 0.00 2.83
178 179 2.360483 TGTGTGTGGGCATTAGTTGTTG 59.640 45.455 0.00 0.00 0.00 3.33
179 180 2.360801 GTGTGTGGGCATTAGTTGTTGT 59.639 45.455 0.00 0.00 0.00 3.32
180 181 2.360483 TGTGTGGGCATTAGTTGTTGTG 59.640 45.455 0.00 0.00 0.00 3.33
181 182 1.339610 TGTGGGCATTAGTTGTTGTGC 59.660 47.619 0.00 0.00 36.88 4.57
185 186 2.064573 GCATTAGTTGTTGTGCCCAC 57.935 50.000 0.00 0.00 0.00 4.61
186 187 1.339610 GCATTAGTTGTTGTGCCCACA 59.660 47.619 0.00 0.00 39.98 4.17
187 188 2.029110 GCATTAGTTGTTGTGCCCACAT 60.029 45.455 1.46 0.00 41.52 3.21
188 189 3.577667 CATTAGTTGTTGTGCCCACATG 58.422 45.455 1.46 0.00 41.52 3.21
189 190 2.356665 TAGTTGTTGTGCCCACATGT 57.643 45.000 1.46 0.00 41.52 3.21
190 191 2.356665 AGTTGTTGTGCCCACATGTA 57.643 45.000 0.00 0.00 41.52 2.29
191 192 2.229792 AGTTGTTGTGCCCACATGTAG 58.770 47.619 0.00 0.00 41.52 2.74
192 193 1.269448 GTTGTTGTGCCCACATGTAGG 59.731 52.381 5.87 5.87 41.52 3.18
193 194 0.476338 TGTTGTGCCCACATGTAGGT 59.524 50.000 12.14 0.00 41.52 3.08
194 195 1.700186 TGTTGTGCCCACATGTAGGTA 59.300 47.619 12.14 4.43 41.52 3.08
195 196 2.307392 TGTTGTGCCCACATGTAGGTAT 59.693 45.455 12.14 0.00 41.52 2.73
196 197 2.682856 GTTGTGCCCACATGTAGGTATG 59.317 50.000 12.14 0.00 41.52 2.39
197 198 1.912731 TGTGCCCACATGTAGGTATGT 59.087 47.619 12.14 0.00 41.77 2.29
204 205 1.490490 ACATGTAGGTATGTGGGCTGG 59.510 52.381 0.00 0.00 39.68 4.85
205 206 1.490490 CATGTAGGTATGTGGGCTGGT 59.510 52.381 0.00 0.00 0.00 4.00
206 207 1.663911 TGTAGGTATGTGGGCTGGTT 58.336 50.000 0.00 0.00 0.00 3.67
207 208 1.280710 TGTAGGTATGTGGGCTGGTTG 59.719 52.381 0.00 0.00 0.00 3.77
208 209 0.254747 TAGGTATGTGGGCTGGTTGC 59.745 55.000 0.00 0.00 41.94 4.17
209 210 1.000896 GGTATGTGGGCTGGTTGCT 60.001 57.895 0.00 0.00 42.39 3.91
210 211 1.315257 GGTATGTGGGCTGGTTGCTG 61.315 60.000 0.00 0.00 42.39 4.41
211 212 0.609131 GTATGTGGGCTGGTTGCTGT 60.609 55.000 0.00 0.00 42.39 4.40
212 213 0.322456 TATGTGGGCTGGTTGCTGTC 60.322 55.000 0.00 0.00 42.39 3.51
213 214 2.985847 GTGGGCTGGTTGCTGTCC 60.986 66.667 0.00 0.00 42.39 4.02
214 215 3.497115 TGGGCTGGTTGCTGTCCA 61.497 61.111 0.00 0.00 42.39 4.02
215 216 2.036256 GGGCTGGTTGCTGTCCAT 59.964 61.111 0.00 0.00 42.39 3.41
216 217 2.345760 GGGCTGGTTGCTGTCCATG 61.346 63.158 0.00 0.00 42.39 3.66
217 218 2.570181 GCTGGTTGCTGTCCATGC 59.430 61.111 0.00 0.00 38.95 4.06
218 219 2.998279 GCTGGTTGCTGTCCATGCC 61.998 63.158 0.00 0.00 38.95 4.40
219 220 1.604308 CTGGTTGCTGTCCATGCCA 60.604 57.895 0.00 0.00 34.26 4.92
220 221 1.870055 CTGGTTGCTGTCCATGCCAC 61.870 60.000 0.00 0.00 34.26 5.01
221 222 1.902918 GGTTGCTGTCCATGCCACA 60.903 57.895 0.00 0.00 0.00 4.17
222 223 1.286880 GTTGCTGTCCATGCCACAC 59.713 57.895 0.00 0.00 0.00 3.82
223 224 2.260154 TTGCTGTCCATGCCACACG 61.260 57.895 0.00 0.00 0.00 4.49
224 225 2.358615 GCTGTCCATGCCACACGA 60.359 61.111 0.00 0.00 0.00 4.35
225 226 2.393768 GCTGTCCATGCCACACGAG 61.394 63.158 0.00 0.00 0.00 4.18
226 227 1.742880 CTGTCCATGCCACACGAGG 60.743 63.158 0.00 0.00 0.00 4.63
238 239 4.539083 ACGAGGCGTGTGGCACAA 62.539 61.111 23.90 3.54 46.16 3.33
239 240 4.012895 CGAGGCGTGTGGCACAAC 62.013 66.667 23.90 17.20 44.16 3.32
240 241 2.591715 GAGGCGTGTGGCACAACT 60.592 61.111 23.90 19.95 44.16 3.16
241 242 1.301401 GAGGCGTGTGGCACAACTA 60.301 57.895 23.90 0.00 44.16 2.24
242 243 1.566018 GAGGCGTGTGGCACAACTAC 61.566 60.000 23.90 12.86 44.16 2.73
243 244 2.613506 GGCGTGTGGCACAACTACC 61.614 63.158 23.90 16.77 44.16 3.18
244 245 2.613506 GCGTGTGGCACAACTACCC 61.614 63.158 23.90 7.78 44.16 3.69
245 246 2.314647 CGTGTGGCACAACTACCCG 61.315 63.158 23.90 16.45 44.16 5.28
246 247 1.070105 GTGTGGCACAACTACCCGA 59.930 57.895 23.90 0.00 44.16 5.14
247 248 0.321298 GTGTGGCACAACTACCCGAT 60.321 55.000 23.90 0.00 44.16 4.18
248 249 1.066716 GTGTGGCACAACTACCCGATA 60.067 52.381 23.90 0.00 44.16 2.92
249 250 1.066716 TGTGGCACAACTACCCGATAC 60.067 52.381 19.74 0.00 44.16 2.24
250 251 1.066716 GTGGCACAACTACCCGATACA 60.067 52.381 13.86 0.00 44.16 2.29
251 252 1.066716 TGGCACAACTACCCGATACAC 60.067 52.381 0.00 0.00 31.92 2.90
252 253 1.648504 GCACAACTACCCGATACACC 58.351 55.000 0.00 0.00 0.00 4.16
253 254 1.066716 GCACAACTACCCGATACACCA 60.067 52.381 0.00 0.00 0.00 4.17
254 255 2.613691 CACAACTACCCGATACACCAC 58.386 52.381 0.00 0.00 0.00 4.16
255 256 2.028839 CACAACTACCCGATACACCACA 60.029 50.000 0.00 0.00 0.00 4.17
256 257 2.028748 ACAACTACCCGATACACCACAC 60.029 50.000 0.00 0.00 0.00 3.82
257 258 0.813184 ACTACCCGATACACCACACG 59.187 55.000 0.00 0.00 0.00 4.49
258 259 0.813184 CTACCCGATACACCACACGT 59.187 55.000 0.00 0.00 0.00 4.49
269 270 3.496711 CACACGTGTGGCAGTTGT 58.503 55.556 35.65 1.93 42.10 3.32
270 271 1.351707 CACACGTGTGGCAGTTGTC 59.648 57.895 35.65 0.00 42.10 3.18
271 272 2.171079 ACACGTGTGGCAGTTGTCG 61.171 57.895 22.71 0.00 34.19 4.35
272 273 2.587753 ACGTGTGGCAGTTGTCGG 60.588 61.111 0.00 0.00 0.00 4.79
273 274 3.345808 CGTGTGGCAGTTGTCGGG 61.346 66.667 0.00 0.00 0.00 5.14
274 275 2.110213 GTGTGGCAGTTGTCGGGA 59.890 61.111 0.00 0.00 0.00 5.14
275 276 2.110213 TGTGGCAGTTGTCGGGAC 59.890 61.111 0.00 0.00 0.00 4.46
276 277 2.668550 GTGGCAGTTGTCGGGACC 60.669 66.667 0.00 0.00 0.00 4.46
277 278 3.948719 TGGCAGTTGTCGGGACCC 61.949 66.667 0.00 0.00 0.00 4.46
278 279 3.637273 GGCAGTTGTCGGGACCCT 61.637 66.667 9.41 0.00 0.00 4.34
279 280 2.430367 GCAGTTGTCGGGACCCTT 59.570 61.111 9.41 0.00 0.00 3.95
280 281 1.671379 GCAGTTGTCGGGACCCTTC 60.671 63.158 9.41 1.77 0.00 3.46
281 282 2.058675 CAGTTGTCGGGACCCTTCT 58.941 57.895 9.41 0.00 0.00 2.85
282 283 0.396811 CAGTTGTCGGGACCCTTCTT 59.603 55.000 9.41 0.00 0.00 2.52
283 284 1.137697 AGTTGTCGGGACCCTTCTTT 58.862 50.000 9.41 0.00 0.00 2.52
312 313 3.089838 CTTCCCACCTCCATGCCA 58.910 61.111 0.00 0.00 0.00 4.92
313 314 1.379044 CTTCCCACCTCCATGCCAC 60.379 63.158 0.00 0.00 0.00 5.01
316 317 2.044650 CCACCTCCATGCCACAGG 60.045 66.667 0.00 0.00 0.00 4.00
343 344 4.025229 GTGAGAAGTTGTTATTGCACGTCA 60.025 41.667 0.00 0.00 0.00 4.35
376 377 1.592081 TGCAAAAGAAAATGCGTGCAC 59.408 42.857 6.82 6.82 45.47 4.57
412 413 3.772932 ACACTTGAAACTGCACACAATG 58.227 40.909 0.00 0.00 0.00 2.82
414 415 4.175516 CACTTGAAACTGCACACAATGTT 58.824 39.130 0.00 0.00 0.00 2.71
421 422 2.121786 CTGCACACAATGTTGAAGCAC 58.878 47.619 0.00 0.00 32.70 4.40
437 438 0.032130 GCACACGTCTTCTGTCAGGA 59.968 55.000 0.00 0.00 0.00 3.86
448 449 2.639065 TCTGTCAGGACAAACACCAAC 58.361 47.619 3.45 0.00 41.33 3.77
449 450 1.676006 CTGTCAGGACAAACACCAACC 59.324 52.381 3.45 0.00 41.33 3.77
454 455 2.100749 CAGGACAAACACCAACCTTTCC 59.899 50.000 0.00 0.00 0.00 3.13
455 456 1.066454 GGACAAACACCAACCTTTCCG 59.934 52.381 0.00 0.00 0.00 4.30
456 457 1.746787 GACAAACACCAACCTTTCCGT 59.253 47.619 0.00 0.00 0.00 4.69
457 458 1.474879 ACAAACACCAACCTTTCCGTG 59.525 47.619 0.00 0.00 0.00 4.94
458 459 1.474879 CAAACACCAACCTTTCCGTGT 59.525 47.619 0.00 0.00 41.07 4.49
460 461 1.099689 ACACCAACCTTTCCGTGTTG 58.900 50.000 0.00 0.00 41.13 3.33
461 462 1.099689 CACCAACCTTTCCGTGTTGT 58.900 50.000 0.00 0.00 40.12 3.32
462 463 1.064952 CACCAACCTTTCCGTGTTGTC 59.935 52.381 0.00 0.00 40.12 3.18
463 464 1.340211 ACCAACCTTTCCGTGTTGTCA 60.340 47.619 0.00 0.00 40.12 3.58
496 2521 5.406175 GGAAATGGAATTGTGACATTGTGTG 59.594 40.000 0.00 0.00 36.10 3.82
516 2541 2.969262 TGCATGGTATTCGGGACTATGA 59.031 45.455 11.01 0.00 37.84 2.15
518 2543 4.041567 TGCATGGTATTCGGGACTATGAAT 59.958 41.667 11.01 0.00 37.84 2.57
520 2545 5.106555 GCATGGTATTCGGGACTATGAATTG 60.107 44.000 11.01 0.00 37.84 2.32
521 2546 5.623956 TGGTATTCGGGACTATGAATTGT 57.376 39.130 0.00 0.00 36.32 2.71
523 2548 5.820423 TGGTATTCGGGACTATGAATTGTTG 59.180 40.000 0.00 0.00 36.32 3.33
524 2549 4.900635 ATTCGGGACTATGAATTGTTGC 57.099 40.909 0.00 0.00 30.90 4.17
525 2550 3.342377 TCGGGACTATGAATTGTTGCA 57.658 42.857 0.00 0.00 0.00 4.08
526 2551 3.270027 TCGGGACTATGAATTGTTGCAG 58.730 45.455 0.00 0.00 0.00 4.41
527 2552 3.009723 CGGGACTATGAATTGTTGCAGT 58.990 45.455 0.00 0.00 0.00 4.40
528 2553 4.081365 TCGGGACTATGAATTGTTGCAGTA 60.081 41.667 0.00 0.00 0.00 2.74
529 2554 4.816385 CGGGACTATGAATTGTTGCAGTAT 59.184 41.667 0.00 0.00 0.00 2.12
530 2555 5.989168 CGGGACTATGAATTGTTGCAGTATA 59.011 40.000 0.00 0.00 0.00 1.47
531 2556 6.481976 CGGGACTATGAATTGTTGCAGTATAA 59.518 38.462 0.00 0.00 0.00 0.98
600 2629 3.126073 CCTTTGAGCTTTTGACTTTGGC 58.874 45.455 0.00 0.00 0.00 4.52
603 2632 2.378038 TGAGCTTTTGACTTTGGCTGT 58.622 42.857 0.00 0.00 33.13 4.40
608 2637 3.066760 GCTTTTGACTTTGGCTGTACTGT 59.933 43.478 1.46 0.00 0.00 3.55
739 2768 0.036577 AGCATCCTGACTGACACTGC 60.037 55.000 0.00 0.00 0.00 4.40
771 2800 4.033009 TCATGACCACTCCACATCACTAT 58.967 43.478 0.00 0.00 0.00 2.12
809 2850 1.372997 CACCACAGTCCGTCCTTCG 60.373 63.158 0.00 0.00 39.52 3.79
825 2866 4.743151 GTCCTTCGGGTTCAAAAATCAAAC 59.257 41.667 0.00 0.00 36.28 2.93
865 2921 1.001706 CCAATGCAGATTGATGGAGCG 60.002 52.381 1.52 0.00 41.49 5.03
921 2977 3.691609 GTGTGAGTGATGATTCCCTTTCC 59.308 47.826 0.00 0.00 0.00 3.13
923 2979 2.092968 TGAGTGATGATTCCCTTTCCCG 60.093 50.000 0.00 0.00 0.00 5.14
924 2980 1.212935 AGTGATGATTCCCTTTCCCGG 59.787 52.381 0.00 0.00 0.00 5.73
925 2981 1.064685 GTGATGATTCCCTTTCCCGGT 60.065 52.381 0.00 0.00 0.00 5.28
926 2982 1.638589 TGATGATTCCCTTTCCCGGTT 59.361 47.619 0.00 0.00 0.00 4.44
927 2983 2.042433 TGATGATTCCCTTTCCCGGTTT 59.958 45.455 0.00 0.00 0.00 3.27
928 2984 2.209690 TGATTCCCTTTCCCGGTTTC 57.790 50.000 0.00 0.00 0.00 2.78
929 2985 1.272258 TGATTCCCTTTCCCGGTTTCC 60.272 52.381 0.00 0.00 0.00 3.13
930 2986 0.040646 ATTCCCTTTCCCGGTTTCCC 59.959 55.000 0.00 0.00 0.00 3.97
931 2987 2.036731 CCCTTTCCCGGTTTCCCC 59.963 66.667 0.00 0.00 0.00 4.81
932 2988 2.036731 CCTTTCCCGGTTTCCCCC 59.963 66.667 0.00 0.00 0.00 5.40
1395 3722 0.965866 TCTCCCGCAACGACATCTCT 60.966 55.000 0.00 0.00 0.00 3.10
2564 4891 3.605634 TCCACGGTATCCTTGTTGAATG 58.394 45.455 0.00 0.00 0.00 2.67
2588 4915 4.390297 GCTAACATATTCTCGCTCCATTCC 59.610 45.833 0.00 0.00 0.00 3.01
2592 4919 2.787473 ATTCTCGCTCCATTCCAACA 57.213 45.000 0.00 0.00 0.00 3.33
2676 5003 4.657824 CGCCGTTGGACTGGACGT 62.658 66.667 0.00 0.00 37.56 4.34
3074 5401 3.376078 GAGTGGGTGCGGTCGGTA 61.376 66.667 0.00 0.00 0.00 4.02
3092 5419 2.435120 TAGTGCGGGAGGAGTGGACA 62.435 60.000 0.00 0.00 34.81 4.02
3095 5422 2.997315 CGGGAGGAGTGGACAGCA 60.997 66.667 0.00 0.00 0.00 4.41
3218 5545 4.530857 CCCTCCATGGCCGACGTC 62.531 72.222 6.96 5.18 0.00 4.34
3239 5566 1.066303 GTGAGGATGATCGAGAGCGTT 59.934 52.381 0.00 0.00 38.98 4.84
3338 5665 7.309316 GGTCTCAGCTACTAGTTTTAGTTCAGT 60.309 40.741 0.00 0.00 40.55 3.41
3390 5717 2.666619 GCATTGAACTGAGGTTGCTTCG 60.667 50.000 0.00 0.00 35.58 3.79
3393 5720 1.149148 GAACTGAGGTTGCTTCGGTC 58.851 55.000 0.00 0.00 35.58 4.79
3452 5780 2.940994 TTTCCTGGTTCCGTTCATGA 57.059 45.000 0.00 0.00 0.00 3.07
3535 5863 7.902920 ATATGTTTGGGTCAATTCAATAGCT 57.097 32.000 0.00 0.00 0.00 3.32
3544 5873 6.238869 GGGTCAATTCAATAGCTCATTCTTCC 60.239 42.308 0.00 0.00 0.00 3.46
3550 5879 2.299993 TAGCTCATTCTTCCAGCGTG 57.700 50.000 0.00 0.00 38.26 5.34
3554 5883 2.541762 GCTCATTCTTCCAGCGTGATAC 59.458 50.000 0.00 0.00 0.00 2.24
3556 5885 4.046938 TCATTCTTCCAGCGTGATACTC 57.953 45.455 0.00 0.00 0.00 2.59
3557 5886 2.961526 TTCTTCCAGCGTGATACTCC 57.038 50.000 0.00 0.00 0.00 3.85
3559 5888 0.105039 CTTCCAGCGTGATACTCCCC 59.895 60.000 0.00 0.00 0.00 4.81
3560 5889 1.335132 TTCCAGCGTGATACTCCCCC 61.335 60.000 0.00 0.00 0.00 5.40
3561 5890 2.417516 CAGCGTGATACTCCCCCG 59.582 66.667 0.00 0.00 0.00 5.73
3562 5891 3.537874 AGCGTGATACTCCCCCGC 61.538 66.667 0.00 0.00 44.35 6.13
3563 5892 4.603946 GCGTGATACTCCCCCGCC 62.604 72.222 0.00 0.00 38.52 6.13
3564 5893 3.925090 CGTGATACTCCCCCGCCC 61.925 72.222 0.00 0.00 0.00 6.13
3579 5908 3.197790 CCCGGTGAAGAGCGCATG 61.198 66.667 11.47 0.00 41.86 4.06
3580 5909 2.434884 CCGGTGAAGAGCGCATGT 60.435 61.111 11.47 0.00 41.86 3.21
3581 5910 2.034879 CCGGTGAAGAGCGCATGTT 61.035 57.895 11.47 0.00 41.86 2.71
3582 5911 1.577328 CCGGTGAAGAGCGCATGTTT 61.577 55.000 11.47 0.00 41.86 2.83
3583 5912 0.238289 CGGTGAAGAGCGCATGTTTT 59.762 50.000 11.47 0.00 36.08 2.43
3584 5913 1.689959 GGTGAAGAGCGCATGTTTTG 58.310 50.000 11.47 0.00 0.00 2.44
3585 5914 1.666888 GGTGAAGAGCGCATGTTTTGG 60.667 52.381 11.47 0.00 0.00 3.28
3586 5915 1.001378 GTGAAGAGCGCATGTTTTGGT 60.001 47.619 11.47 0.00 0.00 3.67
3587 5916 1.680735 TGAAGAGCGCATGTTTTGGTT 59.319 42.857 11.47 0.00 0.00 3.67
3588 5917 2.881513 TGAAGAGCGCATGTTTTGGTTA 59.118 40.909 11.47 0.00 0.00 2.85
3589 5918 3.316588 TGAAGAGCGCATGTTTTGGTTAA 59.683 39.130 11.47 0.00 0.00 2.01
3590 5919 4.202060 TGAAGAGCGCATGTTTTGGTTAAA 60.202 37.500 11.47 0.00 0.00 1.52
3591 5920 4.314740 AGAGCGCATGTTTTGGTTAAAA 57.685 36.364 11.47 0.00 33.57 1.52
3592 5921 4.688021 AGAGCGCATGTTTTGGTTAAAAA 58.312 34.783 11.47 0.00 37.51 1.94
3593 5922 5.296748 AGAGCGCATGTTTTGGTTAAAAAT 58.703 33.333 11.47 0.00 39.86 1.82
3594 5923 5.757808 AGAGCGCATGTTTTGGTTAAAAATT 59.242 32.000 11.47 0.00 39.86 1.82
3595 5924 6.259829 AGAGCGCATGTTTTGGTTAAAAATTT 59.740 30.769 11.47 0.00 39.86 1.82
3596 5925 7.439655 AGAGCGCATGTTTTGGTTAAAAATTTA 59.560 29.630 11.47 0.00 39.86 1.40
3597 5926 8.093659 AGCGCATGTTTTGGTTAAAAATTTAT 57.906 26.923 11.47 0.00 39.86 1.40
3598 5927 8.563732 AGCGCATGTTTTGGTTAAAAATTTATT 58.436 25.926 11.47 0.00 39.86 1.40
3599 5928 8.836109 GCGCATGTTTTGGTTAAAAATTTATTC 58.164 29.630 0.30 0.00 39.86 1.75
3600 5929 9.869844 CGCATGTTTTGGTTAAAAATTTATTCA 57.130 25.926 0.00 0.00 39.86 2.57
3629 5958 9.688592 AAAGAGTCTGCTTTTATTTTCTCAATG 57.311 29.630 0.00 0.00 34.60 2.82
3630 5959 7.311408 AGAGTCTGCTTTTATTTTCTCAATGC 58.689 34.615 0.00 0.00 0.00 3.56
3631 5960 6.985117 AGTCTGCTTTTATTTTCTCAATGCA 58.015 32.000 0.00 0.00 0.00 3.96
3632 5961 7.609056 AGTCTGCTTTTATTTTCTCAATGCAT 58.391 30.769 0.00 0.00 32.14 3.96
3633 5962 8.092687 AGTCTGCTTTTATTTTCTCAATGCATT 58.907 29.630 5.99 5.99 32.14 3.56
3634 5963 8.715088 GTCTGCTTTTATTTTCTCAATGCATTT 58.285 29.630 9.83 0.00 32.14 2.32
3635 5964 9.275398 TCTGCTTTTATTTTCTCAATGCATTTT 57.725 25.926 9.83 0.00 32.14 1.82
3669 5998 5.808042 AATGAATTTCTCTCATCACACGG 57.192 39.130 0.00 0.00 32.26 4.94
3670 5999 4.271696 TGAATTTCTCTCATCACACGGT 57.728 40.909 0.00 0.00 0.00 4.83
3671 6000 5.400066 TGAATTTCTCTCATCACACGGTA 57.600 39.130 0.00 0.00 0.00 4.02
3672 6001 5.789521 TGAATTTCTCTCATCACACGGTAA 58.210 37.500 0.00 0.00 0.00 2.85
3673 6002 6.406370 TGAATTTCTCTCATCACACGGTAAT 58.594 36.000 0.00 0.00 0.00 1.89
3674 6003 6.535150 TGAATTTCTCTCATCACACGGTAATC 59.465 38.462 0.00 0.00 0.00 1.75
3675 6004 5.400066 TTTCTCTCATCACACGGTAATCA 57.600 39.130 0.00 0.00 0.00 2.57
3676 6005 5.400066 TTCTCTCATCACACGGTAATCAA 57.600 39.130 0.00 0.00 0.00 2.57
3677 6006 4.744570 TCTCTCATCACACGGTAATCAAC 58.255 43.478 0.00 0.00 0.00 3.18
3678 6007 3.857052 TCTCATCACACGGTAATCAACC 58.143 45.455 0.00 0.00 45.77 3.77
3717 6046 8.408743 ACATAGTCTTCTTAATTTCTACGTGC 57.591 34.615 0.00 0.00 0.00 5.34
3718 6047 8.033038 ACATAGTCTTCTTAATTTCTACGTGCA 58.967 33.333 0.00 0.00 0.00 4.57
3719 6048 6.707599 AGTCTTCTTAATTTCTACGTGCAC 57.292 37.500 6.82 6.82 0.00 4.57
3720 6049 6.456501 AGTCTTCTTAATTTCTACGTGCACT 58.543 36.000 16.19 4.64 0.00 4.40
3721 6050 6.929606 AGTCTTCTTAATTTCTACGTGCACTT 59.070 34.615 16.19 8.40 0.00 3.16
3722 6051 8.086522 AGTCTTCTTAATTTCTACGTGCACTTA 58.913 33.333 16.19 9.24 0.00 2.24
3723 6052 8.373992 GTCTTCTTAATTTCTACGTGCACTTAG 58.626 37.037 21.19 21.19 0.00 2.18
3724 6053 6.642683 TCTTAATTTCTACGTGCACTTAGC 57.357 37.500 22.13 0.00 45.96 3.09
3738 6067 3.983344 GCACTTAGCACATTGAAAGTTGG 59.017 43.478 0.00 0.00 44.79 3.77
3739 6068 4.261572 GCACTTAGCACATTGAAAGTTGGA 60.262 41.667 0.00 0.00 44.79 3.53
3740 6069 5.565439 GCACTTAGCACATTGAAAGTTGGAT 60.565 40.000 0.00 0.00 44.79 3.41
3741 6070 6.349280 GCACTTAGCACATTGAAAGTTGGATA 60.349 38.462 0.00 0.00 44.79 2.59
3742 6071 7.592938 CACTTAGCACATTGAAAGTTGGATAA 58.407 34.615 0.00 0.00 29.93 1.75
3743 6072 8.246180 CACTTAGCACATTGAAAGTTGGATAAT 58.754 33.333 0.00 0.00 29.93 1.28
3744 6073 8.806146 ACTTAGCACATTGAAAGTTGGATAATT 58.194 29.630 0.00 0.00 0.00 1.40
3748 6077 9.995003 AGCACATTGAAAGTTGGATAATTAAAA 57.005 25.926 0.00 0.00 0.00 1.52
3767 6096 9.972106 AATTAAAAAGGAGAGAGATGATGACTT 57.028 29.630 0.00 0.00 0.00 3.01
3768 6097 8.783833 TTAAAAAGGAGAGAGATGATGACTTG 57.216 34.615 0.00 0.00 0.00 3.16
3769 6098 4.405116 AAGGAGAGAGATGATGACTTGC 57.595 45.455 0.00 0.00 0.00 4.01
3770 6099 3.372897 AGGAGAGAGATGATGACTTGCA 58.627 45.455 0.00 0.00 0.00 4.08
3771 6100 3.968649 AGGAGAGAGATGATGACTTGCAT 59.031 43.478 0.00 0.00 40.77 3.96
3788 6117 3.564408 GCATCTTCGCAATGCATTTTC 57.436 42.857 9.83 3.77 46.93 2.29
3789 6118 3.184541 GCATCTTCGCAATGCATTTTCT 58.815 40.909 9.83 0.00 46.93 2.52
3790 6119 4.353737 GCATCTTCGCAATGCATTTTCTA 58.646 39.130 9.83 0.00 46.93 2.10
3791 6120 4.205792 GCATCTTCGCAATGCATTTTCTAC 59.794 41.667 9.83 0.00 46.93 2.59
3792 6121 5.575957 CATCTTCGCAATGCATTTTCTACT 58.424 37.500 9.83 0.00 0.00 2.57
3793 6122 6.718388 CATCTTCGCAATGCATTTTCTACTA 58.282 36.000 9.83 0.00 0.00 1.82
3794 6123 6.106877 TCTTCGCAATGCATTTTCTACTAC 57.893 37.500 9.83 0.00 0.00 2.73
3795 6124 5.641636 TCTTCGCAATGCATTTTCTACTACA 59.358 36.000 9.83 0.00 0.00 2.74
3796 6125 5.216566 TCGCAATGCATTTTCTACTACAC 57.783 39.130 9.83 0.00 0.00 2.90
3797 6126 4.935205 TCGCAATGCATTTTCTACTACACT 59.065 37.500 9.83 0.00 0.00 3.55
3798 6127 5.411361 TCGCAATGCATTTTCTACTACACTT 59.589 36.000 9.83 0.00 0.00 3.16
3799 6128 5.734498 CGCAATGCATTTTCTACTACACTTC 59.266 40.000 9.83 0.00 0.00 3.01
3800 6129 6.611381 GCAATGCATTTTCTACTACACTTCA 58.389 36.000 9.83 0.00 0.00 3.02
3801 6130 7.253422 GCAATGCATTTTCTACTACACTTCAT 58.747 34.615 9.83 0.00 0.00 2.57
3802 6131 8.397906 GCAATGCATTTTCTACTACACTTCATA 58.602 33.333 9.83 0.00 0.00 2.15
3842 6171 3.915437 AATGTTCACATTTCACCGGAC 57.085 42.857 9.46 0.00 43.48 4.79
3843 6172 1.222300 TGTTCACATTTCACCGGACG 58.778 50.000 9.46 0.00 0.00 4.79
3844 6173 0.515564 GTTCACATTTCACCGGACGG 59.484 55.000 9.46 9.56 42.03 4.79
3845 6174 0.393448 TTCACATTTCACCGGACGGA 59.607 50.000 18.80 0.00 38.96 4.69
3855 6184 1.152819 CCGGACGGAGGGACTATCA 60.153 63.158 4.40 0.00 41.55 2.15
3866 6195 7.442656 ACGGAGGGACTATCATTACAATTAAG 58.557 38.462 0.00 0.00 41.55 1.85
3869 6198 8.606830 GGAGGGACTATCATTACAATTAAGGAT 58.393 37.037 0.00 0.00 41.55 3.24
3881 6210 9.981460 ATTACAATTAAGGATATCCCAAGATCC 57.019 33.333 18.56 0.00 42.60 3.36
3895 6224 3.947196 CCAAGATCCGGAAAACATGATCA 59.053 43.478 9.01 0.00 36.84 2.92
3903 6232 4.297510 CGGAAAACATGATCACAAGCAAA 58.702 39.130 0.00 0.00 0.00 3.68
3905 6234 5.332506 CGGAAAACATGATCACAAGCAAAAC 60.333 40.000 0.00 0.00 0.00 2.43
3927 6256 3.895232 TGAGCTAGTCCTAAAGGCAAG 57.105 47.619 0.00 0.00 34.44 4.01
3929 6258 4.033709 TGAGCTAGTCCTAAAGGCAAGAT 58.966 43.478 0.00 0.00 34.44 2.40
3950 6279 8.893727 CAAGATTAGGAATCAGATTTTACCGTT 58.106 33.333 0.00 0.00 40.42 4.44
3962 6291 6.905076 CAGATTTTACCGTTTATCATTCCACG 59.095 38.462 0.00 0.00 0.00 4.94
3979 6308 2.159393 CCACGGGTGCATATGAGTTTTG 60.159 50.000 6.97 0.00 0.00 2.44
4000 6329 3.133691 GCACTGAATCGCATATTCCAGA 58.866 45.455 6.38 0.00 0.00 3.86
4001 6330 3.186001 GCACTGAATCGCATATTCCAGAG 59.814 47.826 6.38 0.00 0.00 3.35
4009 6338 4.546570 TCGCATATTCCAGAGTCATAACG 58.453 43.478 0.00 0.00 0.00 3.18
4088 6422 8.588290 ATTAACTGTAGGGCATATTTTCAACA 57.412 30.769 0.00 0.00 0.00 3.33
4095 6429 3.632145 GGGCATATTTTCAACATCTCGGT 59.368 43.478 0.00 0.00 0.00 4.69
4100 6434 4.766404 ATTTTCAACATCTCGGTCAACC 57.234 40.909 0.00 0.00 0.00 3.77
4147 6481 2.906458 CTGCTCCTCGGCTTCCAT 59.094 61.111 0.00 0.00 0.00 3.41
4182 6516 2.432628 GACAGTCGGCGTGAAGGG 60.433 66.667 6.85 0.00 0.00 3.95
4183 6517 3.222354 GACAGTCGGCGTGAAGGGT 62.222 63.158 6.85 0.00 0.00 4.34
4184 6518 2.738521 CAGTCGGCGTGAAGGGTG 60.739 66.667 6.85 0.00 0.00 4.61
4185 6519 2.915659 AGTCGGCGTGAAGGGTGA 60.916 61.111 6.85 0.00 0.00 4.02
4186 6520 2.029964 GTCGGCGTGAAGGGTGAA 59.970 61.111 6.85 0.00 0.00 3.18
4187 6521 2.027625 GTCGGCGTGAAGGGTGAAG 61.028 63.158 6.85 0.00 0.00 3.02
4188 6522 2.742372 CGGCGTGAAGGGTGAAGG 60.742 66.667 0.00 0.00 0.00 3.46
4189 6523 2.359975 GGCGTGAAGGGTGAAGGG 60.360 66.667 0.00 0.00 0.00 3.95
4241 6575 4.017808 GAGCTCTAACCACTCTTCCTACA 58.982 47.826 6.43 0.00 0.00 2.74
4243 6577 4.464597 AGCTCTAACCACTCTTCCTACAAG 59.535 45.833 0.00 0.00 0.00 3.16
4269 6603 5.873179 TTGTTGGTCTCGACAAAATATCC 57.127 39.130 0.00 0.00 42.52 2.59
4270 6604 4.258543 TGTTGGTCTCGACAAAATATCCC 58.741 43.478 0.00 0.00 34.54 3.85
4271 6605 4.019681 TGTTGGTCTCGACAAAATATCCCT 60.020 41.667 0.00 0.00 34.54 4.20
4272 6606 4.402056 TGGTCTCGACAAAATATCCCTC 57.598 45.455 0.00 0.00 0.00 4.30
4273 6607 3.134081 TGGTCTCGACAAAATATCCCTCC 59.866 47.826 0.00 0.00 0.00 4.30
4274 6608 3.134081 GGTCTCGACAAAATATCCCTCCA 59.866 47.826 0.00 0.00 0.00 3.86
4275 6609 4.383770 GGTCTCGACAAAATATCCCTCCAA 60.384 45.833 0.00 0.00 0.00 3.53
4276 6610 4.811557 GTCTCGACAAAATATCCCTCCAAG 59.188 45.833 0.00 0.00 0.00 3.61
4277 6611 4.469945 TCTCGACAAAATATCCCTCCAAGT 59.530 41.667 0.00 0.00 0.00 3.16
4278 6612 5.659525 TCTCGACAAAATATCCCTCCAAGTA 59.340 40.000 0.00 0.00 0.00 2.24
4279 6613 6.326583 TCTCGACAAAATATCCCTCCAAGTAT 59.673 38.462 0.00 0.00 0.00 2.12
4280 6614 6.895782 TCGACAAAATATCCCTCCAAGTATT 58.104 36.000 0.00 0.00 0.00 1.89
4281 6615 7.343357 TCGACAAAATATCCCTCCAAGTATTT 58.657 34.615 0.00 0.00 0.00 1.40
4282 6616 7.282224 TCGACAAAATATCCCTCCAAGTATTTG 59.718 37.037 0.00 0.00 29.82 2.32
4290 6624 1.510844 CCAAGTATTTGGCACCGGC 59.489 57.895 0.00 0.00 46.84 6.13
4291 6625 1.136565 CAAGTATTTGGCACCGGCG 59.863 57.895 0.00 0.00 42.47 6.46
4292 6626 1.003112 AAGTATTTGGCACCGGCGA 60.003 52.632 9.30 0.00 42.47 5.54
4293 6627 1.303091 AAGTATTTGGCACCGGCGAC 61.303 55.000 9.30 0.00 42.47 5.19
4294 6628 2.437002 TATTTGGCACCGGCGACC 60.437 61.111 9.30 7.63 42.47 4.79
4295 6629 2.961893 TATTTGGCACCGGCGACCT 61.962 57.895 9.30 0.00 42.47 3.85
4296 6630 2.472414 TATTTGGCACCGGCGACCTT 62.472 55.000 9.30 0.00 42.47 3.50
4297 6631 2.472414 ATTTGGCACCGGCGACCTTA 62.472 55.000 9.30 0.00 42.47 2.69
4298 6632 3.887335 TTGGCACCGGCGACCTTAC 62.887 63.158 9.30 0.00 42.47 2.34
4299 6633 4.078516 GGCACCGGCGACCTTACT 62.079 66.667 9.30 0.00 42.47 2.24
4300 6634 2.813908 GCACCGGCGACCTTACTG 60.814 66.667 9.30 0.00 0.00 2.74
4301 6635 2.967397 CACCGGCGACCTTACTGA 59.033 61.111 9.30 0.00 0.00 3.41
4302 6636 1.515954 CACCGGCGACCTTACTGAT 59.484 57.895 9.30 0.00 0.00 2.90
4303 6637 0.806102 CACCGGCGACCTTACTGATG 60.806 60.000 9.30 0.00 0.00 3.07
4304 6638 1.255667 ACCGGCGACCTTACTGATGT 61.256 55.000 9.30 0.00 0.00 3.06
4305 6639 0.108329 CCGGCGACCTTACTGATGTT 60.108 55.000 9.30 0.00 0.00 2.71
4306 6640 0.999406 CGGCGACCTTACTGATGTTG 59.001 55.000 0.00 0.00 0.00 3.33
4307 6641 1.369625 GGCGACCTTACTGATGTTGG 58.630 55.000 0.00 0.00 0.00 3.77
4308 6642 0.727398 GCGACCTTACTGATGTTGGC 59.273 55.000 0.00 0.00 0.00 4.52
4309 6643 0.999406 CGACCTTACTGATGTTGGCG 59.001 55.000 0.00 0.00 0.00 5.69
4310 6644 0.727398 GACCTTACTGATGTTGGCGC 59.273 55.000 0.00 0.00 0.00 6.53
4311 6645 0.676782 ACCTTACTGATGTTGGCGCC 60.677 55.000 22.73 22.73 0.00 6.53
4312 6646 0.676466 CCTTACTGATGTTGGCGCCA 60.676 55.000 29.03 29.03 0.00 5.69
4313 6647 1.382522 CTTACTGATGTTGGCGCCAT 58.617 50.000 33.25 16.98 0.00 4.40
4314 6648 1.331756 CTTACTGATGTTGGCGCCATC 59.668 52.381 33.25 29.77 39.32 3.51
4315 6649 0.251634 TACTGATGTTGGCGCCATCA 59.748 50.000 35.39 35.39 44.75 3.07
4316 6650 1.308069 ACTGATGTTGGCGCCATCAC 61.308 55.000 35.89 29.06 42.73 3.06
4317 6651 1.303155 TGATGTTGGCGCCATCACA 60.303 52.632 35.89 33.17 42.73 3.58
4318 6652 0.680601 TGATGTTGGCGCCATCACAT 60.681 50.000 35.59 35.59 42.73 3.21
4319 6653 0.457035 GATGTTGGCGCCATCACATT 59.543 50.000 35.40 24.47 38.82 2.71
4320 6654 0.457035 ATGTTGGCGCCATCACATTC 59.543 50.000 35.89 18.22 26.78 2.67
4321 6655 1.226379 GTTGGCGCCATCACATTCG 60.226 57.895 33.25 0.00 0.00 3.34
4322 6656 3.050166 TTGGCGCCATCACATTCGC 62.050 57.895 33.25 0.00 45.99 4.70
4324 6658 2.277501 GCGCCATCACATTCGCAC 60.278 61.111 0.00 0.00 45.99 5.34
4325 6659 2.021793 CGCCATCACATTCGCACG 59.978 61.111 0.00 0.00 0.00 5.34
4326 6660 2.739704 CGCCATCACATTCGCACGT 61.740 57.895 0.00 0.00 0.00 4.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.589716 GCAGTTGCCATGGTCCAGAC 61.590 60.000 14.67 5.40 34.31 3.51
9 10 1.303561 GCAGTTGCCATGGTCCAGA 60.304 57.895 14.67 0.00 34.31 3.86
10 11 2.693762 CGCAGTTGCCATGGTCCAG 61.694 63.158 14.67 1.29 37.91 3.86
11 12 2.672651 CGCAGTTGCCATGGTCCA 60.673 61.111 14.67 0.00 37.91 4.02
12 13 3.443045 CCGCAGTTGCCATGGTCC 61.443 66.667 14.67 1.25 37.91 4.46
13 14 3.443045 CCCGCAGTTGCCATGGTC 61.443 66.667 14.67 6.41 37.91 4.02
50 51 3.950794 TTCTGGTCCCGCATGCGAC 62.951 63.158 39.90 29.34 42.83 5.19
51 52 3.664025 CTTCTGGTCCCGCATGCGA 62.664 63.158 39.90 19.97 42.83 5.10
52 53 3.197790 CTTCTGGTCCCGCATGCG 61.198 66.667 32.60 32.60 39.44 4.73
53 54 2.825836 CCTTCTGGTCCCGCATGC 60.826 66.667 7.91 7.91 0.00 4.06
54 55 2.124570 CCCTTCTGGTCCCGCATG 60.125 66.667 0.00 0.00 0.00 4.06
63 64 1.686110 AGGCCTCGTACCCTTCTGG 60.686 63.158 0.00 0.00 41.37 3.86
64 65 0.970937 TCAGGCCTCGTACCCTTCTG 60.971 60.000 0.00 0.00 0.00 3.02
65 66 0.971447 GTCAGGCCTCGTACCCTTCT 60.971 60.000 0.00 0.00 0.00 2.85
66 67 1.255667 TGTCAGGCCTCGTACCCTTC 61.256 60.000 0.00 0.00 0.00 3.46
67 68 0.617820 ATGTCAGGCCTCGTACCCTT 60.618 55.000 0.00 0.00 0.00 3.95
68 69 0.260816 TATGTCAGGCCTCGTACCCT 59.739 55.000 0.00 0.00 0.00 4.34
69 70 0.388294 GTATGTCAGGCCTCGTACCC 59.612 60.000 0.00 0.00 0.00 3.69
70 71 0.030369 CGTATGTCAGGCCTCGTACC 59.970 60.000 0.00 0.00 0.00 3.34
71 72 0.030369 CCGTATGTCAGGCCTCGTAC 59.970 60.000 0.00 8.08 0.00 3.67
72 73 1.105167 CCCGTATGTCAGGCCTCGTA 61.105 60.000 0.00 0.00 0.00 3.43
73 74 2.423898 CCCGTATGTCAGGCCTCGT 61.424 63.158 0.00 0.00 0.00 4.18
74 75 2.417516 CCCGTATGTCAGGCCTCG 59.582 66.667 0.00 1.29 0.00 4.63
75 76 2.109181 GCCCGTATGTCAGGCCTC 59.891 66.667 0.00 0.00 41.00 4.70
76 77 3.849951 CGCCCGTATGTCAGGCCT 61.850 66.667 0.00 0.00 44.13 5.19
77 78 4.157120 ACGCCCGTATGTCAGGCC 62.157 66.667 0.00 0.00 44.13 5.19
78 79 2.890474 CACGCCCGTATGTCAGGC 60.890 66.667 0.00 0.00 43.53 4.85
79 80 1.809619 CACACGCCCGTATGTCAGG 60.810 63.158 0.00 0.00 0.00 3.86
80 81 1.809619 CCACACGCCCGTATGTCAG 60.810 63.158 0.00 0.00 0.00 3.51
81 82 2.263227 CCACACGCCCGTATGTCA 59.737 61.111 0.00 0.00 0.00 3.58
82 83 2.510691 CCCACACGCCCGTATGTC 60.511 66.667 0.00 0.00 0.00 3.06
83 84 4.770874 GCCCACACGCCCGTATGT 62.771 66.667 0.00 0.00 0.00 2.29
89 90 3.199891 GATAACGCCCACACGCCC 61.200 66.667 0.00 0.00 36.19 6.13
90 91 2.036006 TTGATAACGCCCACACGCC 61.036 57.895 0.00 0.00 36.19 5.68
91 92 1.133869 GTTGATAACGCCCACACGC 59.866 57.895 0.00 0.00 36.19 5.34
92 93 1.127951 GAAGTTGATAACGCCCACACG 59.872 52.381 0.00 0.00 36.23 4.49
93 94 1.127951 CGAAGTTGATAACGCCCACAC 59.872 52.381 0.00 0.00 36.23 3.82
94 95 1.434555 CGAAGTTGATAACGCCCACA 58.565 50.000 0.00 0.00 36.23 4.17
95 96 0.096454 GCGAAGTTGATAACGCCCAC 59.904 55.000 0.00 0.00 44.27 4.61
96 97 2.462503 GCGAAGTTGATAACGCCCA 58.537 52.632 0.00 0.00 44.27 5.36
100 101 0.391927 TGGGGGCGAAGTTGATAACG 60.392 55.000 0.00 0.00 36.23 3.18
101 102 1.092348 GTGGGGGCGAAGTTGATAAC 58.908 55.000 0.00 0.00 0.00 1.89
102 103 0.391927 CGTGGGGGCGAAGTTGATAA 60.392 55.000 0.00 0.00 0.00 1.75
103 104 1.219664 CGTGGGGGCGAAGTTGATA 59.780 57.895 0.00 0.00 0.00 2.15
104 105 2.046314 CGTGGGGGCGAAGTTGAT 60.046 61.111 0.00 0.00 0.00 2.57
120 121 2.425124 CCTTTTCACACGCGTGCG 60.425 61.111 37.35 29.24 43.28 5.34
121 122 0.928451 GAACCTTTTCACACGCGTGC 60.928 55.000 37.35 14.42 43.28 5.34
122 123 0.375454 TGAACCTTTTCACACGCGTG 59.625 50.000 35.99 35.99 45.08 5.34
123 124 0.655733 CTGAACCTTTTCACACGCGT 59.344 50.000 5.58 5.58 36.79 6.01
124 125 0.041312 CCTGAACCTTTTCACACGCG 60.041 55.000 3.53 3.53 36.79 6.01
125 126 1.264288 CTCCTGAACCTTTTCACACGC 59.736 52.381 0.00 0.00 36.79 5.34
126 127 1.873591 CCTCCTGAACCTTTTCACACG 59.126 52.381 0.00 0.00 36.79 4.49
127 128 3.208747 TCCTCCTGAACCTTTTCACAC 57.791 47.619 0.00 0.00 36.79 3.82
128 129 3.943671 TTCCTCCTGAACCTTTTCACA 57.056 42.857 0.00 0.00 36.79 3.58
129 130 5.592104 TTTTTCCTCCTGAACCTTTTCAC 57.408 39.130 0.00 0.00 36.79 3.18
150 151 4.588528 ACTAATGCCCACACACATCTTTTT 59.411 37.500 0.00 0.00 0.00 1.94
151 152 4.151883 ACTAATGCCCACACACATCTTTT 58.848 39.130 0.00 0.00 0.00 2.27
152 153 3.766545 ACTAATGCCCACACACATCTTT 58.233 40.909 0.00 0.00 0.00 2.52
153 154 3.439857 ACTAATGCCCACACACATCTT 57.560 42.857 0.00 0.00 0.00 2.40
154 155 3.084039 CAACTAATGCCCACACACATCT 58.916 45.455 0.00 0.00 0.00 2.90
155 156 2.819608 ACAACTAATGCCCACACACATC 59.180 45.455 0.00 0.00 0.00 3.06
156 157 2.875296 ACAACTAATGCCCACACACAT 58.125 42.857 0.00 0.00 0.00 3.21
157 158 2.356665 ACAACTAATGCCCACACACA 57.643 45.000 0.00 0.00 0.00 3.72
158 159 2.360801 ACAACAACTAATGCCCACACAC 59.639 45.455 0.00 0.00 0.00 3.82
159 160 2.360483 CACAACAACTAATGCCCACACA 59.640 45.455 0.00 0.00 0.00 3.72
160 161 2.862140 GCACAACAACTAATGCCCACAC 60.862 50.000 0.00 0.00 31.71 3.82
161 162 1.339610 GCACAACAACTAATGCCCACA 59.660 47.619 0.00 0.00 31.71 4.17
162 163 2.064573 GCACAACAACTAATGCCCAC 57.935 50.000 0.00 0.00 31.71 4.61
166 167 1.339610 TGTGGGCACAACAACTAATGC 59.660 47.619 0.00 0.00 38.56 3.56
167 168 3.005684 ACATGTGGGCACAACAACTAATG 59.994 43.478 0.00 0.00 45.41 1.90
168 169 3.230134 ACATGTGGGCACAACAACTAAT 58.770 40.909 0.00 0.00 45.41 1.73
169 170 2.660572 ACATGTGGGCACAACAACTAA 58.339 42.857 0.00 0.00 45.41 2.24
170 171 2.356665 ACATGTGGGCACAACAACTA 57.643 45.000 0.00 0.00 45.41 2.24
171 172 2.229792 CTACATGTGGGCACAACAACT 58.770 47.619 9.11 0.00 45.41 3.16
172 173 1.269448 CCTACATGTGGGCACAACAAC 59.731 52.381 16.04 0.00 45.41 3.32
173 174 1.133637 ACCTACATGTGGGCACAACAA 60.134 47.619 26.79 0.00 45.41 2.83
174 175 0.476338 ACCTACATGTGGGCACAACA 59.524 50.000 26.79 0.00 45.41 3.33
175 176 2.483014 TACCTACATGTGGGCACAAC 57.517 50.000 26.79 0.00 45.41 3.32
176 177 2.307392 ACATACCTACATGTGGGCACAA 59.693 45.455 26.79 11.31 45.41 3.33
177 178 1.912731 ACATACCTACATGTGGGCACA 59.087 47.619 26.79 13.43 46.44 4.57
178 179 2.710096 ACATACCTACATGTGGGCAC 57.290 50.000 26.79 0.00 37.74 5.01
184 185 1.490490 CCAGCCCACATACCTACATGT 59.510 52.381 2.69 2.69 39.76 3.21
185 186 1.490490 ACCAGCCCACATACCTACATG 59.510 52.381 0.00 0.00 0.00 3.21
186 187 1.893315 ACCAGCCCACATACCTACAT 58.107 50.000 0.00 0.00 0.00 2.29
187 188 1.280710 CAACCAGCCCACATACCTACA 59.719 52.381 0.00 0.00 0.00 2.74
188 189 2.017113 GCAACCAGCCCACATACCTAC 61.017 57.143 0.00 0.00 37.23 3.18
189 190 0.254747 GCAACCAGCCCACATACCTA 59.745 55.000 0.00 0.00 37.23 3.08
190 191 1.000896 GCAACCAGCCCACATACCT 60.001 57.895 0.00 0.00 37.23 3.08
191 192 3.603365 GCAACCAGCCCACATACC 58.397 61.111 0.00 0.00 37.23 2.73
200 201 2.570181 GCATGGACAGCAACCAGC 59.430 61.111 0.00 0.00 40.89 4.85
201 202 1.604308 TGGCATGGACAGCAACCAG 60.604 57.895 0.00 0.00 40.89 4.00
202 203 1.902918 GTGGCATGGACAGCAACCA 60.903 57.895 0.00 0.00 41.83 3.67
203 204 1.902918 TGTGGCATGGACAGCAACC 60.903 57.895 0.00 0.00 35.00 3.77
204 205 1.286880 GTGTGGCATGGACAGCAAC 59.713 57.895 0.00 0.00 36.45 4.17
205 206 2.260154 CGTGTGGCATGGACAGCAA 61.260 57.895 0.00 0.00 0.00 3.91
206 207 2.669229 CGTGTGGCATGGACAGCA 60.669 61.111 0.00 0.00 0.00 4.41
207 208 2.358615 TCGTGTGGCATGGACAGC 60.359 61.111 0.00 0.00 0.00 4.40
208 209 1.742880 CCTCGTGTGGCATGGACAG 60.743 63.158 0.00 0.00 0.00 3.51
209 210 2.347114 CCTCGTGTGGCATGGACA 59.653 61.111 0.00 0.00 0.00 4.02
221 222 4.539083 TTGTGCCACACGCCTCGT 62.539 61.111 0.00 0.00 42.36 4.18
222 223 4.012895 GTTGTGCCACACGCCTCG 62.013 66.667 0.00 0.00 37.14 4.63
223 224 1.301401 TAGTTGTGCCACACGCCTC 60.301 57.895 0.00 0.00 37.14 4.70
224 225 1.597027 GTAGTTGTGCCACACGCCT 60.597 57.895 0.00 0.00 37.14 5.52
225 226 2.613506 GGTAGTTGTGCCACACGCC 61.614 63.158 0.00 0.00 37.14 5.68
226 227 2.613506 GGGTAGTTGTGCCACACGC 61.614 63.158 0.00 0.00 37.14 5.34
227 228 2.314647 CGGGTAGTTGTGCCACACG 61.315 63.158 0.00 0.00 37.14 4.49
228 229 0.321298 ATCGGGTAGTTGTGCCACAC 60.321 55.000 0.00 0.00 34.56 3.82
229 230 1.066716 GTATCGGGTAGTTGTGCCACA 60.067 52.381 0.00 0.00 0.00 4.17
230 231 1.066716 TGTATCGGGTAGTTGTGCCAC 60.067 52.381 0.00 0.00 0.00 5.01
231 232 1.066716 GTGTATCGGGTAGTTGTGCCA 60.067 52.381 0.00 0.00 0.00 4.92
232 233 1.648504 GTGTATCGGGTAGTTGTGCC 58.351 55.000 0.00 0.00 0.00 5.01
233 234 1.066716 TGGTGTATCGGGTAGTTGTGC 60.067 52.381 0.00 0.00 0.00 4.57
234 235 2.028839 TGTGGTGTATCGGGTAGTTGTG 60.029 50.000 0.00 0.00 0.00 3.33
235 236 2.028748 GTGTGGTGTATCGGGTAGTTGT 60.029 50.000 0.00 0.00 0.00 3.32
236 237 2.613691 GTGTGGTGTATCGGGTAGTTG 58.386 52.381 0.00 0.00 0.00 3.16
237 238 1.203052 CGTGTGGTGTATCGGGTAGTT 59.797 52.381 0.00 0.00 0.00 2.24
238 239 0.813184 CGTGTGGTGTATCGGGTAGT 59.187 55.000 0.00 0.00 0.00 2.73
239 240 0.813184 ACGTGTGGTGTATCGGGTAG 59.187 55.000 0.00 0.00 0.00 3.18
240 241 0.527113 CACGTGTGGTGTATCGGGTA 59.473 55.000 7.58 0.00 41.89 3.69
241 242 1.290955 CACGTGTGGTGTATCGGGT 59.709 57.895 7.58 0.00 41.89 5.28
242 243 4.178861 CACGTGTGGTGTATCGGG 57.821 61.111 7.58 0.00 41.89 5.14
252 253 1.351707 GACAACTGCCACACGTGTG 59.648 57.895 36.13 36.13 45.23 3.82
253 254 2.171079 CGACAACTGCCACACGTGT 61.171 57.895 17.22 17.22 0.00 4.49
254 255 2.625906 CGACAACTGCCACACGTG 59.374 61.111 15.48 15.48 0.00 4.49
255 256 2.587753 CCGACAACTGCCACACGT 60.588 61.111 0.00 0.00 0.00 4.49
256 257 3.345808 CCCGACAACTGCCACACG 61.346 66.667 0.00 0.00 0.00 4.49
257 258 2.110213 TCCCGACAACTGCCACAC 59.890 61.111 0.00 0.00 0.00 3.82
258 259 2.110213 GTCCCGACAACTGCCACA 59.890 61.111 0.00 0.00 0.00 4.17
259 260 2.668550 GGTCCCGACAACTGCCAC 60.669 66.667 0.00 0.00 0.00 5.01
260 261 3.948719 GGGTCCCGACAACTGCCA 61.949 66.667 0.00 0.00 0.00 4.92
261 262 3.192103 AAGGGTCCCGACAACTGCC 62.192 63.158 0.99 0.00 0.00 4.85
262 263 1.671379 GAAGGGTCCCGACAACTGC 60.671 63.158 0.99 0.00 0.00 4.40
263 264 0.396811 AAGAAGGGTCCCGACAACTG 59.603 55.000 0.99 0.00 0.00 3.16
264 265 1.137697 AAAGAAGGGTCCCGACAACT 58.862 50.000 0.99 0.00 0.00 3.16
265 266 1.977056 AAAAGAAGGGTCCCGACAAC 58.023 50.000 0.99 0.00 0.00 3.32
266 267 2.740506 AAAAAGAAGGGTCCCGACAA 57.259 45.000 0.99 0.00 0.00 3.18
283 284 2.238395 AGGTGGGAAGCAAAAGCAAAAA 59.762 40.909 0.00 0.00 0.00 1.94
288 289 0.827507 TGGAGGTGGGAAGCAAAAGC 60.828 55.000 0.00 0.00 0.00 3.51
296 297 2.141011 CTGTGGCATGGAGGTGGGAA 62.141 60.000 0.00 0.00 0.00 3.97
312 313 0.178068 ACAACTTCTCACGTGCCTGT 59.822 50.000 11.67 4.12 0.00 4.00
313 314 1.299541 AACAACTTCTCACGTGCCTG 58.700 50.000 11.67 3.63 0.00 4.85
316 317 3.226347 GCAATAACAACTTCTCACGTGC 58.774 45.455 11.67 0.00 0.00 5.34
343 344 6.899393 TTTCTTTTGCAGAACACCTCATAT 57.101 33.333 0.00 0.00 41.56 1.78
376 377 3.963383 AAGTGTAGAAACTTGCAACCG 57.037 42.857 0.00 0.00 38.95 4.44
393 394 4.082300 TCAACATTGTGTGCAGTTTCAAGT 60.082 37.500 0.00 0.00 0.00 3.16
406 407 2.032054 AGACGTGTGCTTCAACATTGTG 59.968 45.455 0.00 0.00 31.49 3.33
412 413 1.933853 ACAGAAGACGTGTGCTTCAAC 59.066 47.619 15.44 0.00 43.19 3.18
414 415 1.136110 TGACAGAAGACGTGTGCTTCA 59.864 47.619 15.44 9.08 43.19 3.02
421 422 2.509052 TTGTCCTGACAGAAGACGTG 57.491 50.000 3.32 0.00 42.94 4.49
437 438 1.474879 CACGGAAAGGTTGGTGTTTGT 59.525 47.619 0.00 0.00 0.00 2.83
448 449 3.566322 TGGTTAATGACAACACGGAAAGG 59.434 43.478 0.00 0.00 0.00 3.11
449 450 4.320202 CCTGGTTAATGACAACACGGAAAG 60.320 45.833 0.00 0.00 0.00 2.62
454 455 2.773487 TCCCTGGTTAATGACAACACG 58.227 47.619 0.00 0.00 0.00 4.49
455 456 5.469479 CATTTCCCTGGTTAATGACAACAC 58.531 41.667 10.77 0.00 32.36 3.32
456 457 4.526262 CCATTTCCCTGGTTAATGACAACA 59.474 41.667 15.60 0.00 32.36 3.33
457 458 4.770010 TCCATTTCCCTGGTTAATGACAAC 59.230 41.667 15.60 0.00 37.57 3.32
458 459 5.004361 TCCATTTCCCTGGTTAATGACAA 57.996 39.130 15.60 3.25 37.57 3.18
460 461 6.070824 ACAATTCCATTTCCCTGGTTAATGAC 60.071 38.462 15.60 0.00 37.57 3.06
461 462 6.022315 ACAATTCCATTTCCCTGGTTAATGA 58.978 36.000 15.60 2.38 37.57 2.57
462 463 6.070881 TCACAATTCCATTTCCCTGGTTAATG 60.071 38.462 9.75 9.75 37.57 1.90
463 464 6.022315 TCACAATTCCATTTCCCTGGTTAAT 58.978 36.000 0.00 0.00 37.57 1.40
496 2521 3.678056 TCATAGTCCCGAATACCATGC 57.322 47.619 0.00 0.00 0.00 4.06
516 2541 3.756434 ACACGGCTTATACTGCAACAATT 59.244 39.130 0.00 0.00 0.00 2.32
518 2543 2.773487 ACACGGCTTATACTGCAACAA 58.227 42.857 0.00 0.00 0.00 2.83
520 2545 3.824414 AAACACGGCTTATACTGCAAC 57.176 42.857 0.00 0.00 0.00 4.17
521 2546 5.943706 TTAAAACACGGCTTATACTGCAA 57.056 34.783 0.00 0.00 0.00 4.08
523 2548 5.793457 CAGTTTAAAACACGGCTTATACTGC 59.207 40.000 0.00 0.00 33.41 4.40
524 2549 6.894828 ACAGTTTAAAACACGGCTTATACTG 58.105 36.000 10.37 10.37 40.23 2.74
525 2550 7.227116 TGAACAGTTTAAAACACGGCTTATACT 59.773 33.333 0.00 0.00 0.00 2.12
526 2551 7.354257 TGAACAGTTTAAAACACGGCTTATAC 58.646 34.615 0.00 0.00 0.00 1.47
527 2552 7.493743 TGAACAGTTTAAAACACGGCTTATA 57.506 32.000 0.00 0.00 0.00 0.98
528 2553 6.380095 TGAACAGTTTAAAACACGGCTTAT 57.620 33.333 0.00 0.00 0.00 1.73
529 2554 5.814764 TGAACAGTTTAAAACACGGCTTA 57.185 34.783 0.00 0.00 0.00 3.09
530 2555 4.705337 TGAACAGTTTAAAACACGGCTT 57.295 36.364 0.00 0.00 0.00 4.35
531 2556 4.911514 ATGAACAGTTTAAAACACGGCT 57.088 36.364 0.00 0.00 0.00 5.52
600 2629 3.004419 TCCTTTGTCTCGTCACAGTACAG 59.996 47.826 0.00 0.00 0.00 2.74
603 2632 3.005472 CCTTCCTTTGTCTCGTCACAGTA 59.995 47.826 0.00 0.00 0.00 2.74
608 2637 0.034896 GGCCTTCCTTTGTCTCGTCA 59.965 55.000 0.00 0.00 0.00 4.35
771 2800 0.104144 TTTGAAGTGGGAGGGAGGGA 60.104 55.000 0.00 0.00 0.00 4.20
809 2850 2.217620 CGTGCGTTTGATTTTTGAACCC 59.782 45.455 0.00 0.00 0.00 4.11
865 2921 1.397390 CCAAAGCCATGATCCCTGCC 61.397 60.000 0.00 0.00 0.00 4.85
929 2985 2.377869 AGCTATGAGATTGGAATGGGGG 59.622 50.000 0.00 0.00 0.00 5.40
930 2986 3.073503 TGAGCTATGAGATTGGAATGGGG 59.926 47.826 0.00 0.00 0.00 4.96
931 2987 4.362470 TGAGCTATGAGATTGGAATGGG 57.638 45.455 0.00 0.00 0.00 4.00
932 2988 5.374921 ACTTGAGCTATGAGATTGGAATGG 58.625 41.667 0.00 0.00 0.00 3.16
933 2989 8.442632 TTTACTTGAGCTATGAGATTGGAATG 57.557 34.615 0.00 0.00 0.00 2.67
934 2990 8.489489 TCTTTACTTGAGCTATGAGATTGGAAT 58.511 33.333 0.00 0.00 0.00 3.01
945 3001 4.740695 GCGACGATTCTTTACTTGAGCTAT 59.259 41.667 0.00 0.00 0.00 2.97
2564 4891 3.386768 TGGAGCGAGAATATGTTAGCC 57.613 47.619 0.00 0.00 0.00 3.93
2588 4915 2.473816 ACATCGTGTCAGACACTGTTG 58.526 47.619 27.42 24.12 46.46 3.33
2592 4919 3.384668 CAAGAACATCGTGTCAGACACT 58.615 45.455 27.42 11.57 46.46 3.55
2676 5003 4.056125 CAGCAGCGTCACCCTCGA 62.056 66.667 0.00 0.00 0.00 4.04
2810 5137 2.104530 GCTAGGCCGAAGTCCGTC 59.895 66.667 9.55 0.00 36.31 4.79
3074 5401 2.997897 GTCCACTCCTCCCGCACT 60.998 66.667 0.00 0.00 0.00 4.40
3092 5419 2.049063 GCGTCGAACACCTCTGCT 60.049 61.111 0.00 0.00 0.00 4.24
3095 5422 2.979197 CTCCGCGTCGAACACCTCT 61.979 63.158 4.92 0.00 0.00 3.69
3218 5545 0.385348 CGCTCTCGATCATCCTCACG 60.385 60.000 0.00 0.00 38.10 4.35
3278 5605 1.754234 GCCAATGGAGGGCGACATT 60.754 57.895 2.05 0.00 42.39 2.71
3338 5665 4.904251 AGCTATGGAAGAGGAAAGCTGATA 59.096 41.667 0.00 0.00 38.79 2.15
3393 5720 2.254546 TCACCAAGCACAGGTACTTG 57.745 50.000 2.98 2.98 42.35 3.16
3531 5859 1.824852 TCACGCTGGAAGAATGAGCTA 59.175 47.619 0.00 0.00 34.07 3.32
3533 5861 1.661341 ATCACGCTGGAAGAATGAGC 58.339 50.000 0.00 0.00 33.63 4.26
3534 5862 4.047822 GAGTATCACGCTGGAAGAATGAG 58.952 47.826 0.00 0.00 33.63 2.90
3535 5863 3.181475 GGAGTATCACGCTGGAAGAATGA 60.181 47.826 0.00 0.00 36.25 2.57
3562 5891 3.197790 CATGCGCTCTTCACCGGG 61.198 66.667 9.73 0.00 0.00 5.73
3563 5892 1.577328 AAACATGCGCTCTTCACCGG 61.577 55.000 9.73 0.00 0.00 5.28
3564 5893 0.238289 AAAACATGCGCTCTTCACCG 59.762 50.000 9.73 0.00 0.00 4.94
3566 5895 1.001378 ACCAAAACATGCGCTCTTCAC 60.001 47.619 9.73 0.00 0.00 3.18
3568 5897 2.422276 AACCAAAACATGCGCTCTTC 57.578 45.000 9.73 0.00 0.00 2.87
3569 5898 4.314740 TTTAACCAAAACATGCGCTCTT 57.685 36.364 9.73 0.00 0.00 2.85
3570 5899 4.314740 TTTTAACCAAAACATGCGCTCT 57.685 36.364 9.73 0.00 0.00 4.09
3571 5900 5.590104 ATTTTTAACCAAAACATGCGCTC 57.410 34.783 9.73 0.00 37.18 5.03
3572 5901 6.370433 AAATTTTTAACCAAAACATGCGCT 57.630 29.167 9.73 0.00 37.18 5.92
3573 5902 8.720909 AATAAATTTTTAACCAAAACATGCGC 57.279 26.923 0.00 0.00 37.18 6.09
3574 5903 9.869844 TGAATAAATTTTTAACCAAAACATGCG 57.130 25.926 0.00 0.00 37.18 4.73
3603 5932 9.688592 CATTGAGAAAATAAAAGCAGACTCTTT 57.311 29.630 0.00 0.00 37.86 2.52
3604 5933 7.811713 GCATTGAGAAAATAAAAGCAGACTCTT 59.188 33.333 0.00 0.00 0.00 2.85
3605 5934 7.040201 TGCATTGAGAAAATAAAAGCAGACTCT 60.040 33.333 0.00 0.00 0.00 3.24
3606 5935 7.086376 TGCATTGAGAAAATAAAAGCAGACTC 58.914 34.615 0.00 0.00 0.00 3.36
3607 5936 6.985117 TGCATTGAGAAAATAAAAGCAGACT 58.015 32.000 0.00 0.00 0.00 3.24
3608 5937 7.823149 ATGCATTGAGAAAATAAAAGCAGAC 57.177 32.000 0.00 0.00 32.59 3.51
3609 5938 8.836268 AAATGCATTGAGAAAATAAAAGCAGA 57.164 26.923 13.82 0.00 32.59 4.26
3644 5973 7.086376 CCGTGTGATGAGAGAAATTCATTTTT 58.914 34.615 0.00 0.00 35.50 1.94
3645 5974 6.207417 ACCGTGTGATGAGAGAAATTCATTTT 59.793 34.615 0.00 0.00 35.50 1.82
3646 5975 5.707298 ACCGTGTGATGAGAGAAATTCATTT 59.293 36.000 0.00 0.00 35.50 2.32
3647 5976 5.248640 ACCGTGTGATGAGAGAAATTCATT 58.751 37.500 0.00 0.00 35.50 2.57
3648 5977 4.836825 ACCGTGTGATGAGAGAAATTCAT 58.163 39.130 0.00 0.00 37.96 2.57
3649 5978 4.271696 ACCGTGTGATGAGAGAAATTCA 57.728 40.909 0.00 0.00 0.00 2.57
3650 5979 6.535150 TGATTACCGTGTGATGAGAGAAATTC 59.465 38.462 0.00 0.00 0.00 2.17
3651 5980 6.406370 TGATTACCGTGTGATGAGAGAAATT 58.594 36.000 0.00 0.00 0.00 1.82
3652 5981 5.977635 TGATTACCGTGTGATGAGAGAAAT 58.022 37.500 0.00 0.00 0.00 2.17
3653 5982 5.400066 TGATTACCGTGTGATGAGAGAAA 57.600 39.130 0.00 0.00 0.00 2.52
3654 5983 5.168569 GTTGATTACCGTGTGATGAGAGAA 58.831 41.667 0.00 0.00 0.00 2.87
3655 5984 4.381612 GGTTGATTACCGTGTGATGAGAGA 60.382 45.833 0.00 0.00 37.12 3.10
3656 5985 3.865745 GGTTGATTACCGTGTGATGAGAG 59.134 47.826 0.00 0.00 37.12 3.20
3657 5986 3.857052 GGTTGATTACCGTGTGATGAGA 58.143 45.455 0.00 0.00 37.12 3.27
3691 6020 9.512435 GCACGTAGAAATTAAGAAGACTATGTA 57.488 33.333 0.00 0.00 31.69 2.29
3692 6021 8.033038 TGCACGTAGAAATTAAGAAGACTATGT 58.967 33.333 0.00 0.00 32.63 2.29
3693 6022 8.321716 GTGCACGTAGAAATTAAGAAGACTATG 58.678 37.037 0.00 0.00 0.00 2.23
3694 6023 8.251721 AGTGCACGTAGAAATTAAGAAGACTAT 58.748 33.333 12.01 0.00 0.00 2.12
3695 6024 7.600065 AGTGCACGTAGAAATTAAGAAGACTA 58.400 34.615 12.01 0.00 0.00 2.59
3696 6025 6.456501 AGTGCACGTAGAAATTAAGAAGACT 58.543 36.000 12.01 0.00 0.00 3.24
3697 6026 6.707599 AGTGCACGTAGAAATTAAGAAGAC 57.292 37.500 12.01 0.00 0.00 3.01
3698 6027 7.063074 GCTAAGTGCACGTAGAAATTAAGAAGA 59.937 37.037 34.61 3.32 42.31 2.87
3699 6028 7.174082 GCTAAGTGCACGTAGAAATTAAGAAG 58.826 38.462 34.61 13.59 42.31 2.85
3700 6029 7.057149 GCTAAGTGCACGTAGAAATTAAGAA 57.943 36.000 34.61 3.93 42.31 2.52
3701 6030 6.642683 GCTAAGTGCACGTAGAAATTAAGA 57.357 37.500 34.61 4.42 42.31 2.10
3716 6045 3.983344 CCAACTTTCAATGTGCTAAGTGC 59.017 43.478 0.00 0.00 43.25 4.40
3717 6046 5.437289 TCCAACTTTCAATGTGCTAAGTG 57.563 39.130 0.00 0.00 31.64 3.16
3718 6047 7.759489 TTATCCAACTTTCAATGTGCTAAGT 57.241 32.000 0.00 0.00 32.52 2.24
3722 6051 9.995003 TTTTAATTATCCAACTTTCAATGTGCT 57.005 25.926 0.00 0.00 0.00 4.40
3741 6070 9.972106 AAGTCATCATCTCTCTCCTTTTTAATT 57.028 29.630 0.00 0.00 0.00 1.40
3742 6071 9.393512 CAAGTCATCATCTCTCTCCTTTTTAAT 57.606 33.333 0.00 0.00 0.00 1.40
3743 6072 7.335422 GCAAGTCATCATCTCTCTCCTTTTTAA 59.665 37.037 0.00 0.00 0.00 1.52
3744 6073 6.820656 GCAAGTCATCATCTCTCTCCTTTTTA 59.179 38.462 0.00 0.00 0.00 1.52
3745 6074 5.647225 GCAAGTCATCATCTCTCTCCTTTTT 59.353 40.000 0.00 0.00 0.00 1.94
3746 6075 5.184711 GCAAGTCATCATCTCTCTCCTTTT 58.815 41.667 0.00 0.00 0.00 2.27
3747 6076 4.224594 TGCAAGTCATCATCTCTCTCCTTT 59.775 41.667 0.00 0.00 0.00 3.11
3748 6077 3.773667 TGCAAGTCATCATCTCTCTCCTT 59.226 43.478 0.00 0.00 0.00 3.36
3749 6078 3.372897 TGCAAGTCATCATCTCTCTCCT 58.627 45.455 0.00 0.00 0.00 3.69
3750 6079 3.815856 TGCAAGTCATCATCTCTCTCC 57.184 47.619 0.00 0.00 0.00 3.71
3769 6098 5.575957 AGTAGAAAATGCATTGCGAAGATG 58.424 37.500 13.82 0.00 0.00 2.90
3770 6099 5.824904 AGTAGAAAATGCATTGCGAAGAT 57.175 34.783 13.82 0.00 0.00 2.40
3771 6100 5.641636 TGTAGTAGAAAATGCATTGCGAAGA 59.358 36.000 13.82 0.00 0.00 2.87
3772 6101 5.734498 GTGTAGTAGAAAATGCATTGCGAAG 59.266 40.000 13.82 0.00 0.00 3.79
3773 6102 5.411361 AGTGTAGTAGAAAATGCATTGCGAA 59.589 36.000 13.82 0.00 0.00 4.70
3774 6103 4.935205 AGTGTAGTAGAAAATGCATTGCGA 59.065 37.500 13.82 1.97 0.00 5.10
3775 6104 5.221891 AGTGTAGTAGAAAATGCATTGCG 57.778 39.130 13.82 0.00 0.00 4.85
3776 6105 6.611381 TGAAGTGTAGTAGAAAATGCATTGC 58.389 36.000 13.82 8.55 0.00 3.56
3823 6152 1.804151 CGTCCGGTGAAATGTGAACAT 59.196 47.619 0.00 0.00 38.41 2.71
3824 6153 1.222300 CGTCCGGTGAAATGTGAACA 58.778 50.000 0.00 0.00 0.00 3.18
3825 6154 0.515564 CCGTCCGGTGAAATGTGAAC 59.484 55.000 0.00 0.00 0.00 3.18
3826 6155 0.393448 TCCGTCCGGTGAAATGTGAA 59.607 50.000 0.00 0.00 36.47 3.18
3827 6156 0.037697 CTCCGTCCGGTGAAATGTGA 60.038 55.000 0.00 0.00 36.47 3.58
3828 6157 1.019278 CCTCCGTCCGGTGAAATGTG 61.019 60.000 0.00 0.00 36.47 3.21
3829 6158 1.295423 CCTCCGTCCGGTGAAATGT 59.705 57.895 0.00 0.00 36.47 2.71
3830 6159 1.449601 CCCTCCGTCCGGTGAAATG 60.450 63.158 0.00 0.00 36.47 2.32
3831 6160 1.611261 TCCCTCCGTCCGGTGAAAT 60.611 57.895 0.00 0.00 36.47 2.17
3832 6161 2.203669 TCCCTCCGTCCGGTGAAA 60.204 61.111 0.00 0.00 36.47 2.69
3833 6162 2.141011 TAGTCCCTCCGTCCGGTGAA 62.141 60.000 0.00 0.00 36.47 3.18
3834 6163 1.929860 ATAGTCCCTCCGTCCGGTGA 61.930 60.000 0.00 0.00 36.47 4.02
3835 6164 1.453762 GATAGTCCCTCCGTCCGGTG 61.454 65.000 0.00 3.10 36.47 4.94
3836 6165 1.152798 GATAGTCCCTCCGTCCGGT 60.153 63.158 0.00 0.00 36.47 5.28
3837 6166 0.539901 ATGATAGTCCCTCCGTCCGG 60.540 60.000 0.00 0.00 0.00 5.14
3838 6167 1.329256 AATGATAGTCCCTCCGTCCG 58.671 55.000 0.00 0.00 0.00 4.79
3839 6168 3.228453 TGTAATGATAGTCCCTCCGTCC 58.772 50.000 0.00 0.00 0.00 4.79
3840 6169 4.931661 TTGTAATGATAGTCCCTCCGTC 57.068 45.455 0.00 0.00 0.00 4.79
3841 6170 5.888982 AATTGTAATGATAGTCCCTCCGT 57.111 39.130 0.00 0.00 0.00 4.69
3842 6171 6.874134 CCTTAATTGTAATGATAGTCCCTCCG 59.126 42.308 0.00 0.00 0.00 4.63
3843 6172 7.974504 TCCTTAATTGTAATGATAGTCCCTCC 58.025 38.462 0.00 0.00 0.00 4.30
3855 6184 9.981460 GGATCTTGGGATATCCTTAATTGTAAT 57.019 33.333 21.18 3.69 38.92 1.89
3866 6195 4.072839 GTTTTCCGGATCTTGGGATATCC 58.927 47.826 13.87 13.87 38.66 2.59
3869 6198 4.165180 TCATGTTTTCCGGATCTTGGGATA 59.835 41.667 4.15 0.00 31.46 2.59
3881 6210 3.557577 TGCTTGTGATCATGTTTTCCG 57.442 42.857 0.00 0.00 0.00 4.30
3903 6232 3.583086 TGCCTTTAGGACTAGCTCAAGTT 59.417 43.478 0.00 0.00 37.39 2.66
3905 6234 3.895232 TGCCTTTAGGACTAGCTCAAG 57.105 47.619 0.00 0.00 37.39 3.02
3916 6245 6.595682 TCTGATTCCTAATCTTGCCTTTAGG 58.404 40.000 2.91 2.91 43.87 2.69
3917 6246 8.688747 AATCTGATTCCTAATCTTGCCTTTAG 57.311 34.615 0.00 0.00 38.72 1.85
3929 6258 9.893634 TGATAAACGGTAAAATCTGATTCCTAA 57.106 29.630 2.92 0.00 0.00 2.69
3950 6279 2.727123 ATGCACCCGTGGAATGATAA 57.273 45.000 0.00 0.00 33.77 1.75
3979 6308 3.133691 TCTGGAATATGCGATTCAGTGC 58.866 45.455 11.90 0.00 0.00 4.40
3983 6312 4.670896 TGACTCTGGAATATGCGATTCA 57.329 40.909 11.90 0.00 0.00 2.57
4070 6404 5.049405 CCGAGATGTTGAAAATATGCCCTAC 60.049 44.000 0.00 0.00 0.00 3.18
4095 6429 1.225983 CCCATGGCCATACGGTTGA 59.774 57.895 20.30 0.00 33.28 3.18
4100 6434 2.906897 GCACCCCATGGCCATACG 60.907 66.667 20.30 11.56 33.59 3.06
4147 6481 1.053835 TCCAGACCAAGTGCCACTCA 61.054 55.000 0.00 0.00 0.00 3.41
4182 6516 1.745489 GGCATCGTCACCCCTTCAC 60.745 63.158 0.00 0.00 0.00 3.18
4183 6517 2.668632 GGCATCGTCACCCCTTCA 59.331 61.111 0.00 0.00 0.00 3.02
4184 6518 2.511600 CGGCATCGTCACCCCTTC 60.512 66.667 0.00 0.00 0.00 3.46
4185 6519 3.000819 TCGGCATCGTCACCCCTT 61.001 61.111 0.00 0.00 37.69 3.95
4186 6520 3.771160 GTCGGCATCGTCACCCCT 61.771 66.667 0.00 0.00 37.69 4.79
4187 6521 4.832608 GGTCGGCATCGTCACCCC 62.833 72.222 0.00 0.00 37.69 4.95
4188 6522 4.832608 GGGTCGGCATCGTCACCC 62.833 72.222 0.00 0.98 43.22 4.61
4241 6575 5.379732 TTTGTCGAGACCAACAAAAACTT 57.620 34.783 0.34 0.00 41.15 2.66
4273 6607 1.136565 CGCCGGTGCCAAATACTTG 59.863 57.895 0.00 0.00 0.00 3.16
4274 6608 1.003112 TCGCCGGTGCCAAATACTT 60.003 52.632 11.05 0.00 0.00 2.24
4275 6609 1.743995 GTCGCCGGTGCCAAATACT 60.744 57.895 11.05 0.00 0.00 2.12
4276 6610 2.757056 GGTCGCCGGTGCCAAATAC 61.757 63.158 19.53 8.37 0.00 1.89
4277 6611 2.437002 GGTCGCCGGTGCCAAATA 60.437 61.111 19.53 0.00 0.00 1.40
4278 6612 2.472414 TAAGGTCGCCGGTGCCAAAT 62.472 55.000 24.22 14.95 0.00 2.32
4279 6613 3.179888 TAAGGTCGCCGGTGCCAAA 62.180 57.895 24.22 12.65 0.00 3.28
4280 6614 3.627952 TAAGGTCGCCGGTGCCAA 61.628 61.111 24.22 12.94 0.00 4.52
4281 6615 4.382320 GTAAGGTCGCCGGTGCCA 62.382 66.667 24.22 7.56 0.00 4.92
4282 6616 4.078516 AGTAAGGTCGCCGGTGCC 62.079 66.667 11.05 15.03 0.00 5.01
4283 6617 2.573609 ATCAGTAAGGTCGCCGGTGC 62.574 60.000 11.05 5.44 0.00 5.01
4284 6618 0.806102 CATCAGTAAGGTCGCCGGTG 60.806 60.000 9.28 9.28 0.00 4.94
4285 6619 1.255667 ACATCAGTAAGGTCGCCGGT 61.256 55.000 1.90 0.00 0.00 5.28
4286 6620 0.108329 AACATCAGTAAGGTCGCCGG 60.108 55.000 0.00 0.00 0.00 6.13
4287 6621 0.999406 CAACATCAGTAAGGTCGCCG 59.001 55.000 0.00 0.00 0.00 6.46
4288 6622 1.369625 CCAACATCAGTAAGGTCGCC 58.630 55.000 0.00 0.00 0.00 5.54
4289 6623 0.727398 GCCAACATCAGTAAGGTCGC 59.273 55.000 0.00 0.00 0.00 5.19
4290 6624 0.999406 CGCCAACATCAGTAAGGTCG 59.001 55.000 0.00 0.00 0.00 4.79
4291 6625 0.727398 GCGCCAACATCAGTAAGGTC 59.273 55.000 0.00 0.00 0.00 3.85
4292 6626 0.676782 GGCGCCAACATCAGTAAGGT 60.677 55.000 24.80 0.00 0.00 3.50
4293 6627 0.676466 TGGCGCCAACATCAGTAAGG 60.676 55.000 30.74 0.00 0.00 2.69
4294 6628 1.331756 GATGGCGCCAACATCAGTAAG 59.668 52.381 36.33 0.00 43.21 2.34
4295 6629 1.339535 TGATGGCGCCAACATCAGTAA 60.340 47.619 36.33 10.16 46.99 2.24
4296 6630 0.251634 TGATGGCGCCAACATCAGTA 59.748 50.000 36.33 11.00 46.99 2.74
4297 6631 1.002257 TGATGGCGCCAACATCAGT 60.002 52.632 36.33 16.00 46.99 3.41
4298 6632 3.908189 TGATGGCGCCAACATCAG 58.092 55.556 36.33 0.00 46.99 2.90
4300 6634 0.457035 AATGTGATGGCGCCAACATC 59.543 50.000 35.19 28.76 43.82 3.06
4301 6635 0.457035 GAATGTGATGGCGCCAACAT 59.543 50.000 37.34 34.37 31.67 2.71
4302 6636 1.882311 GAATGTGATGGCGCCAACA 59.118 52.632 36.33 34.41 0.00 3.33
4303 6637 1.226379 CGAATGTGATGGCGCCAAC 60.226 57.895 36.33 31.91 0.00 3.77
4304 6638 3.050166 GCGAATGTGATGGCGCCAA 62.050 57.895 36.33 18.56 43.33 4.52
4305 6639 3.507924 GCGAATGTGATGGCGCCA 61.508 61.111 34.80 34.80 43.33 5.69
4308 6642 2.021793 CGTGCGAATGTGATGGCG 59.978 61.111 0.00 0.00 0.00 5.69
4309 6643 3.177600 ACGTGCGAATGTGATGGC 58.822 55.556 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.