Multiple sequence alignment - TraesCS5A01G127200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G127200 chr5A 100.000 3432 0 0 1 3432 283015475 283012044 0.000000e+00 6338.0
1 TraesCS5A01G127200 chr5A 96.000 475 17 2 2959 3432 254571409 254571882 0.000000e+00 771.0
2 TraesCS5A01G127200 chr5A 94.512 492 20 6 2943 3432 254057919 254057433 0.000000e+00 752.0
3 TraesCS5A01G127200 chr5D 91.786 2447 105 39 1 2386 215246026 215243615 0.000000e+00 3317.0
4 TraesCS5A01G127200 chr5D 83.590 195 28 2 2431 2625 552694517 552694327 2.720000e-41 180.0
5 TraesCS5A01G127200 chr5D 84.127 126 19 1 2500 2625 469227210 469227334 1.670000e-23 121.0
6 TraesCS5A01G127200 chr5B 92.893 1182 47 11 1235 2389 230427894 230426723 0.000000e+00 1683.0
7 TraesCS5A01G127200 chr5B 91.133 1015 38 17 271 1239 230434245 230433237 0.000000e+00 1328.0
8 TraesCS5A01G127200 chr5B 85.988 521 64 3 2441 2955 230426630 230426113 1.800000e-152 549.0
9 TraesCS5A01G127200 chr5B 89.344 244 26 0 1 244 230434481 230434238 1.200000e-79 307.0
10 TraesCS5A01G127200 chr7A 95.825 479 18 1 2956 3432 362653825 362653347 0.000000e+00 773.0
11 TraesCS5A01G127200 chr7A 83.704 540 62 10 2438 2958 589269405 589269937 1.430000e-133 486.0
12 TraesCS5A01G127200 chr7A 82.778 540 67 11 2438 2958 589266708 589267240 3.120000e-125 459.0
13 TraesCS5A01G127200 chr1A 96.000 475 18 1 2959 3432 172287914 172288388 0.000000e+00 771.0
14 TraesCS5A01G127200 chr6A 95.781 474 20 0 2959 3432 284515465 284514992 0.000000e+00 765.0
15 TraesCS5A01G127200 chr6A 95.798 476 17 3 2959 3432 290611376 290611850 0.000000e+00 765.0
16 TraesCS5A01G127200 chr6A 90.566 53 2 2 2415 2467 532233520 532233569 2.210000e-07 67.6
17 TraesCS5A01G127200 chr4A 95.781 474 20 0 2959 3432 238343406 238342933 0.000000e+00 765.0
18 TraesCS5A01G127200 chr4A 95.789 475 18 2 2959 3432 309821549 309821076 0.000000e+00 765.0
19 TraesCS5A01G127200 chrUn 95.983 473 13 3 2961 3432 72217614 72217147 0.000000e+00 763.0
20 TraesCS5A01G127200 chr7B 85.882 510 63 5 2455 2958 527984367 527984873 5.040000e-148 534.0
21 TraesCS5A01G127200 chr3A 82.629 213 27 4 2746 2952 277440147 277440355 2.720000e-41 180.0
22 TraesCS5A01G127200 chr3A 95.556 45 2 0 2430 2474 507099895 507099851 4.750000e-09 73.1
23 TraesCS5A01G127200 chr3A 93.182 44 3 0 2430 2473 391303434 391303391 7.950000e-07 65.8
24 TraesCS5A01G127200 chr7D 74.040 547 88 29 2430 2932 494987565 494988101 1.270000e-39 174.0
25 TraesCS5A01G127200 chr6D 84.358 179 23 4 2430 2608 437659406 437659233 1.640000e-38 171.0
26 TraesCS5A01G127200 chr3B 88.060 67 5 1 2430 2496 448354291 448354228 3.670000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G127200 chr5A 283012044 283015475 3431 True 6338.0 6338 100.0000 1 3432 1 chr5A.!!$R2 3431
1 TraesCS5A01G127200 chr5D 215243615 215246026 2411 True 3317.0 3317 91.7860 1 2386 1 chr5D.!!$R1 2385
2 TraesCS5A01G127200 chr5B 230426113 230427894 1781 True 1116.0 1683 89.4405 1235 2955 2 chr5B.!!$R1 1720
3 TraesCS5A01G127200 chr5B 230433237 230434481 1244 True 817.5 1328 90.2385 1 1239 2 chr5B.!!$R2 1238
4 TraesCS5A01G127200 chr7A 589266708 589269937 3229 False 472.5 486 83.2410 2438 2958 2 chr7A.!!$F1 520
5 TraesCS5A01G127200 chr7B 527984367 527984873 506 False 534.0 534 85.8820 2455 2958 1 chr7B.!!$F1 503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
71 72 1.078143 ACCTCCAGGCATTCTTCGC 60.078 57.895 0.0 0.0 39.32 4.70 F
1041 1063 1.002773 ACGTGATGGGTTTAGTGGACC 59.997 52.381 0.0 0.0 36.41 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1112 1167 0.750850 TATACAGCAGAGGCCGGTTC 59.249 55.0 1.90 0.98 42.56 3.62 R
3009 3291 0.038159 GTCAAGGTCGACTCCCACAG 60.038 60.0 16.46 0.00 32.92 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 1.078143 ACCTCCAGGCATTCTTCGC 60.078 57.895 0.00 0.00 39.32 4.70
133 136 2.829914 TACAGCGGCGGGTACGAT 60.830 61.111 9.78 0.00 44.60 3.73
137 140 4.501714 GCGGCGGGTACGATGACA 62.502 66.667 9.78 0.00 44.60 3.58
145 148 2.674177 CGGGTACGATGACAAAAGAGCT 60.674 50.000 0.00 0.00 44.60 4.09
198 201 2.181021 CCGCGGTCTAGCTCGTTT 59.819 61.111 19.50 0.00 34.40 3.60
306 309 4.866486 GCCACAAAGAAAAAGGCTATCATG 59.134 41.667 0.00 0.00 42.01 3.07
332 336 6.170506 AGAAATATTAACACTGTCAAGCGGA 58.829 36.000 0.00 0.00 0.00 5.54
400 404 1.961277 CACGTGGACTTGACCAGCC 60.961 63.158 7.95 0.00 40.85 4.85
542 546 8.919145 ACCTGAAATTAAACTTCAAATGTGGTA 58.081 29.630 8.56 0.00 32.57 3.25
621 625 7.497925 AATGGTAGTTCAAACTTCAGACTTC 57.502 36.000 0.00 0.00 40.37 3.01
625 629 1.497991 TCAAACTTCAGACTTCCGCG 58.502 50.000 0.00 0.00 0.00 6.46
813 819 3.927854 TCGATGTAGAGATCCGGACTAG 58.072 50.000 6.12 0.00 0.00 2.57
814 820 3.324268 TCGATGTAGAGATCCGGACTAGT 59.676 47.826 6.12 0.00 0.00 2.57
816 822 4.626604 CGATGTAGAGATCCGGACTAGTAC 59.373 50.000 6.12 7.62 0.00 2.73
817 823 3.987547 TGTAGAGATCCGGACTAGTACG 58.012 50.000 21.03 21.03 36.49 3.67
903 909 3.117663 AGTCAAAGACTTGCCCCTGTAAA 60.118 43.478 0.00 0.00 40.28 2.01
945 951 5.060506 AGACAAACCAAATCACACGTATGA 58.939 37.500 0.00 0.00 0.00 2.15
975 993 1.844003 CGACCACGTACATATGCGC 59.156 57.895 0.00 0.00 37.46 6.09
1041 1063 1.002773 ACGTGATGGGTTTAGTGGACC 59.997 52.381 0.00 0.00 36.41 4.46
1112 1167 2.462889 ACAAATGCACGCAAACTTCTG 58.537 42.857 0.00 0.00 0.00 3.02
1321 1376 2.505498 GCACGTCGATCGCGTCATT 61.505 57.895 26.58 9.78 44.19 2.57
1400 1455 4.238514 GTCAGTGTCAGTCCAGTGAATAC 58.761 47.826 0.59 0.00 44.20 1.89
1622 1678 1.671901 CCTGCGTCTTCTCCTCCTCC 61.672 65.000 0.00 0.00 0.00 4.30
1623 1679 0.682855 CTGCGTCTTCTCCTCCTCCT 60.683 60.000 0.00 0.00 0.00 3.69
1624 1680 0.681564 TGCGTCTTCTCCTCCTCCTC 60.682 60.000 0.00 0.00 0.00 3.71
1625 1681 1.388837 GCGTCTTCTCCTCCTCCTCC 61.389 65.000 0.00 0.00 0.00 4.30
1888 1944 9.578439 AATAATTTGCTCTTTATTGTTCAGCTC 57.422 29.630 0.00 0.00 29.24 4.09
2212 2268 4.400529 TGTAGAGACACTGTTTCTTGCA 57.599 40.909 7.49 5.39 29.81 4.08
2293 2371 9.968870 AGTCACTTTTTCTTCTACTAGTACTTG 57.031 33.333 0.00 0.59 0.00 3.16
2305 2383 9.551734 TTCTACTAGTACTTGGTTTCTTTTTCC 57.448 33.333 0.00 0.00 0.00 3.13
2359 2441 2.805845 CGTGATTGTAAGGGTCCTACG 58.194 52.381 0.00 0.00 0.00 3.51
2382 2464 1.444119 ATGTGCCGGTGTTGTGTGTC 61.444 55.000 1.90 0.00 0.00 3.67
2408 2490 5.878406 TTTTGCCCCTTTGAATACTTTCA 57.122 34.783 0.00 0.00 40.09 2.69
2409 2491 5.467035 TTTGCCCCTTTGAATACTTTCAG 57.533 39.130 0.00 0.00 42.60 3.02
2410 2492 4.112634 TGCCCCTTTGAATACTTTCAGT 57.887 40.909 0.00 0.00 42.60 3.41
2411 2493 4.479158 TGCCCCTTTGAATACTTTCAGTT 58.521 39.130 0.00 0.00 42.60 3.16
2413 2495 4.321974 GCCCCTTTGAATACTTTCAGTTGG 60.322 45.833 0.00 0.00 42.60 3.77
2414 2496 4.220602 CCCCTTTGAATACTTTCAGTTGGG 59.779 45.833 12.06 12.06 42.60 4.12
2415 2497 4.321974 CCCTTTGAATACTTTCAGTTGGGC 60.322 45.833 8.65 0.00 42.60 5.36
2416 2498 4.280677 CCTTTGAATACTTTCAGTTGGGCA 59.719 41.667 0.00 0.00 42.60 5.36
2417 2499 5.047092 CCTTTGAATACTTTCAGTTGGGCAT 60.047 40.000 0.00 0.00 42.60 4.40
2418 2500 6.152661 CCTTTGAATACTTTCAGTTGGGCATA 59.847 38.462 0.00 0.00 42.60 3.14
2419 2501 7.147846 CCTTTGAATACTTTCAGTTGGGCATAT 60.148 37.037 0.00 0.00 42.60 1.78
2420 2502 6.698008 TGAATACTTTCAGTTGGGCATATG 57.302 37.500 0.00 0.00 36.94 1.78
2422 2504 7.342581 TGAATACTTTCAGTTGGGCATATGTA 58.657 34.615 4.29 0.00 36.94 2.29
2423 2505 7.498900 TGAATACTTTCAGTTGGGCATATGTAG 59.501 37.037 4.29 0.00 36.94 2.74
2425 2507 3.576078 TTCAGTTGGGCATATGTAGGG 57.424 47.619 4.29 0.00 0.00 3.53
2428 2510 3.525609 TCAGTTGGGCATATGTAGGGAAA 59.474 43.478 4.29 0.00 0.00 3.13
2429 2511 4.017958 TCAGTTGGGCATATGTAGGGAAAA 60.018 41.667 4.29 0.00 0.00 2.29
2430 2512 4.709397 CAGTTGGGCATATGTAGGGAAAAA 59.291 41.667 4.29 0.00 0.00 1.94
2463 2726 2.492881 CTGCATGTTGATTGGTTGCCTA 59.507 45.455 0.00 0.00 32.39 3.93
2468 2731 3.760738 TGTTGATTGGTTGCCTACATCA 58.239 40.909 0.00 0.00 0.00 3.07
2478 2741 4.404715 GGTTGCCTACATCACCTCTAGTAA 59.595 45.833 0.00 0.00 0.00 2.24
2488 2751 7.007116 ACATCACCTCTAGTAATCTGCATCTA 58.993 38.462 0.00 0.00 0.00 1.98
2522 2785 2.921912 GCATGATGTTTGGTTGTGGACG 60.922 50.000 0.00 0.00 0.00 4.79
2545 2808 3.203716 GTTTCAGGGAAAACACGAGTCT 58.796 45.455 0.00 0.00 38.68 3.24
2552 2815 2.287103 GGAAAACACGAGTCTGGTTGTC 59.713 50.000 0.00 5.73 0.00 3.18
2562 2825 4.642429 GAGTCTGGTTGTCTGGTTACATT 58.358 43.478 0.00 0.00 0.00 2.71
2565 2828 4.819630 GTCTGGTTGTCTGGTTACATTCAA 59.180 41.667 0.00 0.00 0.00 2.69
2578 2841 5.295787 GGTTACATTCAAGACAGTTGTGTGA 59.704 40.000 0.00 0.00 36.88 3.58
2591 2854 3.910627 AGTTGTGTGATAACCTCCTCCTT 59.089 43.478 0.00 0.00 0.00 3.36
2629 2892 2.624838 CAGAGGCACACATTGAAAGGTT 59.375 45.455 0.00 0.00 0.00 3.50
2656 2932 3.354948 AGAGCAAGGCACACATCATAA 57.645 42.857 0.00 0.00 0.00 1.90
2737 3013 9.431887 TCAAAGTCTAAACCACACATATAACTC 57.568 33.333 0.00 0.00 0.00 3.01
2744 3020 9.773328 CTAAACCACACATATAACTCAAACATG 57.227 33.333 0.00 0.00 0.00 3.21
2766 3042 2.567615 ACAGGAGCTCATTTAGTCGGTT 59.432 45.455 17.19 0.00 0.00 4.44
2769 3045 2.346803 GAGCTCATTTAGTCGGTTGCA 58.653 47.619 9.40 0.00 0.00 4.08
2770 3046 2.742053 GAGCTCATTTAGTCGGTTGCAA 59.258 45.455 9.40 0.00 0.00 4.08
2806 3082 0.588252 CTTCTTGCACTTGGTGACCG 59.412 55.000 0.00 0.00 35.23 4.79
2810 3086 2.594592 GCACTTGGTGACCGCCTT 60.595 61.111 0.00 0.00 35.23 4.35
2822 3098 2.436646 CGCCTTCATGCCCTCGTT 60.437 61.111 0.00 0.00 0.00 3.85
2833 3109 1.287425 GCCCTCGTTATTGAAGACGG 58.713 55.000 4.46 0.00 39.59 4.79
2856 3132 1.378762 CTTCATGGTGTCGGGGGTT 59.621 57.895 0.00 0.00 0.00 4.11
2896 3178 2.462723 TGTACCCGATCTGGTGAATGA 58.537 47.619 18.29 0.00 39.53 2.57
2901 3183 0.179100 CGATCTGGTGAATGACGGCT 60.179 55.000 0.00 0.00 0.00 5.52
2904 3186 3.733337 GATCTGGTGAATGACGGCTAAT 58.267 45.455 0.00 0.00 0.00 1.73
2921 3203 0.116940 AATGTGGCCCAACCCTGATT 59.883 50.000 0.00 0.00 37.83 2.57
2926 3208 1.043116 GGCCCAACCCTGATTAAGGC 61.043 60.000 0.00 0.00 45.89 4.35
2932 3214 0.541863 ACCCTGATTAAGGCTGACCG 59.458 55.000 0.00 0.00 45.89 4.79
2958 3240 1.464376 CGACCACCCTCACTGTGACT 61.464 60.000 6.36 0.00 35.74 3.41
2959 3241 0.034059 GACCACCCTCACTGTGACTG 59.966 60.000 6.36 3.43 35.74 3.51
2960 3242 0.398522 ACCACCCTCACTGTGACTGA 60.399 55.000 6.36 0.00 35.74 3.41
2961 3243 0.979665 CCACCCTCACTGTGACTGAT 59.020 55.000 6.36 0.00 35.74 2.90
2962 3244 2.179427 CCACCCTCACTGTGACTGATA 58.821 52.381 6.36 0.00 35.74 2.15
2963 3245 2.167281 CCACCCTCACTGTGACTGATAG 59.833 54.545 6.36 0.00 35.74 2.08
2964 3246 3.092301 CACCCTCACTGTGACTGATAGA 58.908 50.000 6.36 0.00 35.74 1.98
2965 3247 3.130164 CACCCTCACTGTGACTGATAGAG 59.870 52.174 6.36 0.00 35.74 2.43
2966 3248 2.692557 CCCTCACTGTGACTGATAGAGG 59.307 54.545 6.36 16.61 40.58 3.69
2967 3249 3.360867 CCTCACTGTGACTGATAGAGGT 58.639 50.000 6.36 0.00 37.11 3.85
2968 3250 4.527944 CCTCACTGTGACTGATAGAGGTA 58.472 47.826 6.36 0.00 37.11 3.08
2969 3251 4.950475 CCTCACTGTGACTGATAGAGGTAA 59.050 45.833 6.36 0.00 37.11 2.85
2970 3252 5.419155 CCTCACTGTGACTGATAGAGGTAAA 59.581 44.000 6.36 0.00 37.11 2.01
2971 3253 6.405286 CCTCACTGTGACTGATAGAGGTAAAG 60.405 46.154 6.36 0.00 37.11 1.85
2972 3254 5.419155 TCACTGTGACTGATAGAGGTAAAGG 59.581 44.000 6.36 0.00 0.00 3.11
2973 3255 5.186021 CACTGTGACTGATAGAGGTAAAGGT 59.814 44.000 0.32 0.00 0.00 3.50
2974 3256 5.186021 ACTGTGACTGATAGAGGTAAAGGTG 59.814 44.000 0.00 0.00 0.00 4.00
2975 3257 5.084519 TGTGACTGATAGAGGTAAAGGTGT 58.915 41.667 0.00 0.00 0.00 4.16
2976 3258 5.185249 TGTGACTGATAGAGGTAAAGGTGTC 59.815 44.000 0.00 0.00 0.00 3.67
2977 3259 4.710375 TGACTGATAGAGGTAAAGGTGTCC 59.290 45.833 0.00 0.00 0.00 4.02
2978 3260 4.031611 ACTGATAGAGGTAAAGGTGTCCC 58.968 47.826 0.00 0.00 0.00 4.46
2979 3261 3.028850 TGATAGAGGTAAAGGTGTCCCG 58.971 50.000 0.00 0.00 35.12 5.14
2980 3262 2.905415 TAGAGGTAAAGGTGTCCCGA 57.095 50.000 0.00 0.00 35.12 5.14
2981 3263 2.249309 AGAGGTAAAGGTGTCCCGAT 57.751 50.000 0.00 0.00 35.12 4.18
2982 3264 1.831736 AGAGGTAAAGGTGTCCCGATG 59.168 52.381 0.00 0.00 35.12 3.84
2983 3265 1.553704 GAGGTAAAGGTGTCCCGATGT 59.446 52.381 0.00 0.00 35.12 3.06
2984 3266 1.982958 AGGTAAAGGTGTCCCGATGTT 59.017 47.619 0.00 0.00 35.12 2.71
2985 3267 2.374170 AGGTAAAGGTGTCCCGATGTTT 59.626 45.455 0.00 0.00 35.12 2.83
2986 3268 2.745821 GGTAAAGGTGTCCCGATGTTTC 59.254 50.000 0.00 0.00 35.12 2.78
2987 3269 1.519408 AAAGGTGTCCCGATGTTTCG 58.481 50.000 0.00 0.00 45.08 3.46
3000 3282 1.737838 TGTTTCGATGAGATGGTGGC 58.262 50.000 0.00 0.00 0.00 5.01
3001 3283 1.278985 TGTTTCGATGAGATGGTGGCT 59.721 47.619 0.00 0.00 0.00 4.75
3002 3284 2.499693 TGTTTCGATGAGATGGTGGCTA 59.500 45.455 0.00 0.00 0.00 3.93
3003 3285 3.134623 TGTTTCGATGAGATGGTGGCTAT 59.865 43.478 0.00 0.00 0.00 2.97
3004 3286 3.667497 TTCGATGAGATGGTGGCTATC 57.333 47.619 0.00 0.00 0.00 2.08
3005 3287 1.541588 TCGATGAGATGGTGGCTATCG 59.458 52.381 0.00 0.00 38.86 2.92
3006 3288 1.270826 CGATGAGATGGTGGCTATCGT 59.729 52.381 0.00 0.00 34.43 3.73
3007 3289 2.288457 CGATGAGATGGTGGCTATCGTT 60.288 50.000 0.00 0.00 34.43 3.85
3008 3290 3.733337 GATGAGATGGTGGCTATCGTTT 58.267 45.455 0.00 0.00 0.00 3.60
3009 3291 3.179443 TGAGATGGTGGCTATCGTTTC 57.821 47.619 0.00 0.00 0.00 2.78
3010 3292 2.766263 TGAGATGGTGGCTATCGTTTCT 59.234 45.455 0.00 0.00 0.00 2.52
3011 3293 3.126831 GAGATGGTGGCTATCGTTTCTG 58.873 50.000 0.00 0.00 0.00 3.02
3012 3294 2.501723 AGATGGTGGCTATCGTTTCTGT 59.498 45.455 0.00 0.00 0.00 3.41
3013 3295 2.093306 TGGTGGCTATCGTTTCTGTG 57.907 50.000 0.00 0.00 0.00 3.66
3014 3296 1.338674 TGGTGGCTATCGTTTCTGTGG 60.339 52.381 0.00 0.00 0.00 4.17
3015 3297 1.369625 GTGGCTATCGTTTCTGTGGG 58.630 55.000 0.00 0.00 0.00 4.61
3016 3298 1.066430 GTGGCTATCGTTTCTGTGGGA 60.066 52.381 0.00 0.00 0.00 4.37
3017 3299 1.207089 TGGCTATCGTTTCTGTGGGAG 59.793 52.381 0.00 0.00 0.00 4.30
3018 3300 1.207329 GGCTATCGTTTCTGTGGGAGT 59.793 52.381 0.00 0.00 0.00 3.85
3019 3301 2.541556 GCTATCGTTTCTGTGGGAGTC 58.458 52.381 0.00 0.00 0.00 3.36
3020 3302 2.798680 CTATCGTTTCTGTGGGAGTCG 58.201 52.381 0.00 0.00 0.00 4.18
3021 3303 1.254026 ATCGTTTCTGTGGGAGTCGA 58.746 50.000 0.00 0.00 36.21 4.20
3022 3304 0.313043 TCGTTTCTGTGGGAGTCGAC 59.687 55.000 7.70 7.70 0.00 4.20
3023 3305 0.666577 CGTTTCTGTGGGAGTCGACC 60.667 60.000 13.01 3.55 0.00 4.79
3024 3306 0.680061 GTTTCTGTGGGAGTCGACCT 59.320 55.000 13.01 0.00 0.00 3.85
3025 3307 1.070289 GTTTCTGTGGGAGTCGACCTT 59.930 52.381 13.01 0.00 0.00 3.50
3026 3308 0.679505 TTCTGTGGGAGTCGACCTTG 59.320 55.000 13.01 0.00 0.00 3.61
3027 3309 0.178973 TCTGTGGGAGTCGACCTTGA 60.179 55.000 13.01 0.00 0.00 3.02
3028 3310 0.038159 CTGTGGGAGTCGACCTTGAC 60.038 60.000 13.01 5.21 39.21 3.18
3029 3311 1.080705 GTGGGAGTCGACCTTGACG 60.081 63.158 13.01 0.00 43.70 4.35
3030 3312 1.228337 TGGGAGTCGACCTTGACGA 60.228 57.895 13.01 0.00 43.70 4.20
3031 3313 0.611062 TGGGAGTCGACCTTGACGAT 60.611 55.000 13.01 0.00 43.70 3.73
3032 3314 0.100861 GGGAGTCGACCTTGACGATC 59.899 60.000 13.01 0.00 43.70 3.69
3033 3315 0.100861 GGAGTCGACCTTGACGATCC 59.899 60.000 13.01 6.19 43.70 3.36
3034 3316 0.248134 GAGTCGACCTTGACGATCCG 60.248 60.000 13.01 0.00 43.70 4.18
3035 3317 0.675837 AGTCGACCTTGACGATCCGA 60.676 55.000 13.01 0.00 43.70 4.55
3036 3318 0.522915 GTCGACCTTGACGATCCGAC 60.523 60.000 3.51 0.00 41.62 4.79
3037 3319 0.675837 TCGACCTTGACGATCCGACT 60.676 55.000 0.00 0.00 34.85 4.18
3038 3320 1.012086 CGACCTTGACGATCCGACTA 58.988 55.000 0.00 0.00 0.00 2.59
3039 3321 1.267932 CGACCTTGACGATCCGACTAC 60.268 57.143 0.00 0.00 0.00 2.73
3040 3322 0.731417 ACCTTGACGATCCGACTACG 59.269 55.000 0.00 0.00 39.43 3.51
3041 3323 1.012086 CCTTGACGATCCGACTACGA 58.988 55.000 0.00 0.00 42.66 3.43
3042 3324 1.399440 CCTTGACGATCCGACTACGAA 59.601 52.381 0.00 0.00 42.66 3.85
3043 3325 2.438583 CTTGACGATCCGACTACGAAC 58.561 52.381 0.00 0.00 42.66 3.95
3044 3326 0.371301 TGACGATCCGACTACGAACG 59.629 55.000 0.00 0.00 42.66 3.95
3045 3327 0.371645 GACGATCCGACTACGAACGT 59.628 55.000 5.03 5.03 42.66 3.99
3046 3328 0.095935 ACGATCCGACTACGAACGTG 59.904 55.000 10.14 3.19 42.66 4.49
3047 3329 1.192436 CGATCCGACTACGAACGTGC 61.192 60.000 10.14 0.00 42.66 5.34
3048 3330 1.192436 GATCCGACTACGAACGTGCG 61.192 60.000 16.06 16.06 42.66 5.34
3049 3331 1.638388 ATCCGACTACGAACGTGCGA 61.638 55.000 25.68 5.35 42.66 5.10
3050 3332 1.862147 CCGACTACGAACGTGCGAG 60.862 63.158 25.68 17.49 42.66 5.03
3051 3333 1.131218 CGACTACGAACGTGCGAGA 59.869 57.895 25.68 9.14 42.66 4.04
3052 3334 1.119015 CGACTACGAACGTGCGAGAC 61.119 60.000 25.68 14.24 42.66 3.36
3064 3346 4.361827 CGAGACGTCGTGCCTTAG 57.638 61.111 10.46 0.00 41.57 2.18
3065 3347 1.868251 CGAGACGTCGTGCCTTAGC 60.868 63.158 10.46 0.00 41.57 3.09
3066 3348 2.523184 CGAGACGTCGTGCCTTAGCA 62.523 60.000 10.46 0.00 41.68 3.49
3084 3366 2.863739 GCAATCGCTAAACCAACTTCC 58.136 47.619 0.00 0.00 34.30 3.46
3085 3367 2.727916 GCAATCGCTAAACCAACTTCCG 60.728 50.000 0.00 0.00 34.30 4.30
3086 3368 2.739913 CAATCGCTAAACCAACTTCCGA 59.260 45.455 0.00 0.00 0.00 4.55
3087 3369 2.074547 TCGCTAAACCAACTTCCGAG 57.925 50.000 0.00 0.00 0.00 4.63
3088 3370 1.076332 CGCTAAACCAACTTCCGAGG 58.924 55.000 0.00 0.00 0.00 4.63
3089 3371 1.450025 GCTAAACCAACTTCCGAGGG 58.550 55.000 0.00 0.00 0.00 4.30
3090 3372 1.949079 GCTAAACCAACTTCCGAGGGG 60.949 57.143 0.00 0.00 0.00 4.79
3091 3373 1.350019 CTAAACCAACTTCCGAGGGGT 59.650 52.381 0.00 0.00 36.57 4.95
3092 3374 0.554305 AAACCAACTTCCGAGGGGTT 59.446 50.000 0.00 0.00 42.75 4.11
3093 3375 1.437397 AACCAACTTCCGAGGGGTTA 58.563 50.000 0.00 0.00 40.62 2.85
3094 3376 1.665137 ACCAACTTCCGAGGGGTTAT 58.335 50.000 0.00 0.00 32.67 1.89
3095 3377 1.990327 ACCAACTTCCGAGGGGTTATT 59.010 47.619 0.00 0.00 32.67 1.40
3096 3378 2.290705 ACCAACTTCCGAGGGGTTATTG 60.291 50.000 0.00 0.00 32.67 1.90
3097 3379 2.026636 CCAACTTCCGAGGGGTTATTGA 60.027 50.000 0.00 0.00 33.83 2.57
3098 3380 3.007635 CAACTTCCGAGGGGTTATTGAC 58.992 50.000 0.00 0.00 33.83 3.18
3107 3389 3.493213 GTTATTGACCACGCCGGG 58.507 61.111 2.18 0.00 40.22 5.73
3108 3390 2.110352 GTTATTGACCACGCCGGGG 61.110 63.158 18.33 18.33 40.22 5.73
3109 3391 3.980442 TTATTGACCACGCCGGGGC 62.980 63.158 19.97 0.00 40.22 5.80
3122 3404 2.668632 GGGGCACGATCAACCTGA 59.331 61.111 0.00 0.00 0.00 3.86
3123 3405 1.745489 GGGGCACGATCAACCTGAC 60.745 63.158 0.00 0.00 0.00 3.51
3124 3406 1.745489 GGGCACGATCAACCTGACC 60.745 63.158 0.00 0.00 0.00 4.02
3125 3407 1.003839 GGCACGATCAACCTGACCA 60.004 57.895 0.00 0.00 0.00 4.02
3126 3408 1.298859 GGCACGATCAACCTGACCAC 61.299 60.000 0.00 0.00 0.00 4.16
3127 3409 1.626654 GCACGATCAACCTGACCACG 61.627 60.000 0.00 0.00 0.00 4.94
3128 3410 0.038618 CACGATCAACCTGACCACGA 60.039 55.000 0.00 0.00 0.00 4.35
3129 3411 0.243907 ACGATCAACCTGACCACGAG 59.756 55.000 0.00 0.00 0.00 4.18
3130 3412 0.458543 CGATCAACCTGACCACGAGG 60.459 60.000 0.00 0.00 42.21 4.63
3131 3413 0.108138 GATCAACCTGACCACGAGGG 60.108 60.000 3.29 0.00 44.81 4.30
3140 3422 4.695560 CCACGAGGGTCTGTTTCC 57.304 61.111 0.00 0.00 0.00 3.13
3141 3423 2.058675 CCACGAGGGTCTGTTTCCT 58.941 57.895 0.00 0.00 35.82 3.36
3142 3424 0.320771 CCACGAGGGTCTGTTTCCTG 60.321 60.000 0.00 0.00 32.74 3.86
3143 3425 0.951040 CACGAGGGTCTGTTTCCTGC 60.951 60.000 0.00 0.00 32.74 4.85
3144 3426 1.738099 CGAGGGTCTGTTTCCTGCG 60.738 63.158 0.00 0.00 32.74 5.18
3145 3427 1.671742 GAGGGTCTGTTTCCTGCGA 59.328 57.895 0.00 0.00 32.74 5.10
3146 3428 0.390472 GAGGGTCTGTTTCCTGCGAG 60.390 60.000 0.00 0.00 32.74 5.03
3147 3429 2.035442 GGGTCTGTTTCCTGCGAGC 61.035 63.158 0.00 0.00 0.00 5.03
3148 3430 1.301716 GGTCTGTTTCCTGCGAGCA 60.302 57.895 0.00 0.00 0.00 4.26
3149 3431 0.884704 GGTCTGTTTCCTGCGAGCAA 60.885 55.000 0.00 0.00 0.00 3.91
3150 3432 0.944386 GTCTGTTTCCTGCGAGCAAA 59.056 50.000 0.00 0.00 0.00 3.68
3151 3433 0.944386 TCTGTTTCCTGCGAGCAAAC 59.056 50.000 0.00 1.90 0.00 2.93
3152 3434 0.384725 CTGTTTCCTGCGAGCAAACG 60.385 55.000 0.00 0.00 33.48 3.60
3153 3435 0.812014 TGTTTCCTGCGAGCAAACGA 60.812 50.000 0.00 0.00 33.48 3.85
3154 3436 0.306533 GTTTCCTGCGAGCAAACGAA 59.693 50.000 0.00 0.00 35.09 3.85
3155 3437 0.586319 TTTCCTGCGAGCAAACGAAG 59.414 50.000 0.00 0.00 38.52 3.79
3156 3438 0.249699 TTCCTGCGAGCAAACGAAGA 60.250 50.000 7.38 0.00 40.98 2.87
3157 3439 0.249699 TCCTGCGAGCAAACGAAGAA 60.250 50.000 7.38 0.00 40.98 2.52
3158 3440 0.110644 CCTGCGAGCAAACGAAGAAC 60.111 55.000 7.38 0.00 40.98 3.01
3159 3441 0.581529 CTGCGAGCAAACGAAGAACA 59.418 50.000 0.00 0.00 40.98 3.18
3160 3442 1.003972 CTGCGAGCAAACGAAGAACAA 60.004 47.619 0.00 0.00 40.98 2.83
3161 3443 1.003972 TGCGAGCAAACGAAGAACAAG 60.004 47.619 0.00 0.00 35.09 3.16
3162 3444 1.663494 CGAGCAAACGAAGAACAAGC 58.337 50.000 0.00 0.00 35.09 4.01
3163 3445 1.003972 CGAGCAAACGAAGAACAAGCA 60.004 47.619 0.00 0.00 35.09 3.91
3164 3446 2.538737 CGAGCAAACGAAGAACAAGCAA 60.539 45.455 0.00 0.00 35.09 3.91
3165 3447 3.038710 GAGCAAACGAAGAACAAGCAAG 58.961 45.455 0.00 0.00 0.00 4.01
3166 3448 2.682856 AGCAAACGAAGAACAAGCAAGA 59.317 40.909 0.00 0.00 0.00 3.02
3167 3449 3.128589 AGCAAACGAAGAACAAGCAAGAA 59.871 39.130 0.00 0.00 0.00 2.52
3168 3450 3.857093 GCAAACGAAGAACAAGCAAGAAA 59.143 39.130 0.00 0.00 0.00 2.52
3169 3451 4.259411 GCAAACGAAGAACAAGCAAGAAAC 60.259 41.667 0.00 0.00 0.00 2.78
3170 3452 4.965119 AACGAAGAACAAGCAAGAAACT 57.035 36.364 0.00 0.00 0.00 2.66
3171 3453 4.278678 ACGAAGAACAAGCAAGAAACTG 57.721 40.909 0.00 0.00 0.00 3.16
3172 3454 3.938963 ACGAAGAACAAGCAAGAAACTGA 59.061 39.130 0.00 0.00 0.00 3.41
3173 3455 4.034510 ACGAAGAACAAGCAAGAAACTGAG 59.965 41.667 0.00 0.00 0.00 3.35
3174 3456 4.271049 CGAAGAACAAGCAAGAAACTGAGA 59.729 41.667 0.00 0.00 0.00 3.27
3175 3457 5.049818 CGAAGAACAAGCAAGAAACTGAGAT 60.050 40.000 0.00 0.00 0.00 2.75
3176 3458 6.512415 CGAAGAACAAGCAAGAAACTGAGATT 60.512 38.462 0.00 0.00 0.00 2.40
3177 3459 6.069684 AGAACAAGCAAGAAACTGAGATTG 57.930 37.500 0.00 0.00 0.00 2.67
3178 3460 4.234530 ACAAGCAAGAAACTGAGATTGC 57.765 40.909 0.65 0.65 46.50 3.56
3184 3466 6.187125 GCAAGAAACTGAGATTGCAATCTA 57.813 37.500 35.74 23.50 45.39 1.98
3185 3467 6.256686 GCAAGAAACTGAGATTGCAATCTAG 58.743 40.000 35.74 30.44 45.39 2.43
3186 3468 6.093219 GCAAGAAACTGAGATTGCAATCTAGA 59.907 38.462 35.74 25.10 45.39 2.43
3187 3469 7.201714 GCAAGAAACTGAGATTGCAATCTAGAT 60.202 37.037 35.74 24.16 45.39 1.98
3188 3470 9.322773 CAAGAAACTGAGATTGCAATCTAGATA 57.677 33.333 35.74 22.43 45.39 1.98
3226 3508 8.910944 AGATGAAAGATTTATTGATCAAGGTGG 58.089 33.333 14.54 0.00 0.00 4.61
3227 3509 7.408756 TGAAAGATTTATTGATCAAGGTGGG 57.591 36.000 14.54 0.00 0.00 4.61
3228 3510 6.380846 TGAAAGATTTATTGATCAAGGTGGGG 59.619 38.462 14.54 0.00 0.00 4.96
3229 3511 5.472301 AGATTTATTGATCAAGGTGGGGT 57.528 39.130 14.54 0.00 0.00 4.95
3230 3512 5.842339 AGATTTATTGATCAAGGTGGGGTT 58.158 37.500 14.54 0.00 0.00 4.11
3231 3513 5.893824 AGATTTATTGATCAAGGTGGGGTTC 59.106 40.000 14.54 3.24 0.00 3.62
3232 3514 4.946160 TTATTGATCAAGGTGGGGTTCT 57.054 40.909 14.54 0.00 0.00 3.01
3233 3515 2.584835 TTGATCAAGGTGGGGTTCTG 57.415 50.000 3.38 0.00 0.00 3.02
3234 3516 1.444933 TGATCAAGGTGGGGTTCTGT 58.555 50.000 0.00 0.00 0.00 3.41
3235 3517 1.073763 TGATCAAGGTGGGGTTCTGTG 59.926 52.381 0.00 0.00 0.00 3.66
3236 3518 1.351017 GATCAAGGTGGGGTTCTGTGA 59.649 52.381 0.00 0.00 0.00 3.58
3237 3519 0.472471 TCAAGGTGGGGTTCTGTGAC 59.528 55.000 0.00 0.00 0.00 3.67
3238 3520 0.884704 CAAGGTGGGGTTCTGTGACG 60.885 60.000 0.00 0.00 0.00 4.35
3239 3521 1.342672 AAGGTGGGGTTCTGTGACGT 61.343 55.000 0.00 0.00 0.00 4.34
3240 3522 1.301479 GGTGGGGTTCTGTGACGTC 60.301 63.158 9.11 9.11 0.00 4.34
3241 3523 1.746517 GTGGGGTTCTGTGACGTCT 59.253 57.895 17.92 0.00 0.00 4.18
3242 3524 0.106149 GTGGGGTTCTGTGACGTCTT 59.894 55.000 17.92 0.00 0.00 3.01
3243 3525 0.105964 TGGGGTTCTGTGACGTCTTG 59.894 55.000 17.92 6.88 0.00 3.02
3244 3526 0.602905 GGGGTTCTGTGACGTCTTGG 60.603 60.000 17.92 6.51 0.00 3.61
3245 3527 0.106149 GGGTTCTGTGACGTCTTGGT 59.894 55.000 17.92 0.00 0.00 3.67
3246 3528 1.499049 GGTTCTGTGACGTCTTGGTC 58.501 55.000 17.92 3.20 37.45 4.02
3247 3529 1.068741 GGTTCTGTGACGTCTTGGTCT 59.931 52.381 17.92 0.00 37.81 3.85
3248 3530 2.128035 GTTCTGTGACGTCTTGGTCTG 58.872 52.381 17.92 6.49 37.81 3.51
3249 3531 0.673985 TCTGTGACGTCTTGGTCTGG 59.326 55.000 17.92 0.00 37.81 3.86
3250 3532 0.389391 CTGTGACGTCTTGGTCTGGT 59.611 55.000 17.92 0.00 37.81 4.00
3251 3533 0.387929 TGTGACGTCTTGGTCTGGTC 59.612 55.000 17.92 0.00 37.81 4.02
3252 3534 0.663568 GTGACGTCTTGGTCTGGTCG 60.664 60.000 17.92 0.00 37.81 4.79
3253 3535 1.105167 TGACGTCTTGGTCTGGTCGT 61.105 55.000 17.92 0.00 37.81 4.34
3254 3536 0.031721 GACGTCTTGGTCTGGTCGTT 59.968 55.000 8.70 0.00 34.09 3.85
3255 3537 0.249322 ACGTCTTGGTCTGGTCGTTG 60.249 55.000 0.00 0.00 0.00 4.10
3256 3538 0.031585 CGTCTTGGTCTGGTCGTTGA 59.968 55.000 0.00 0.00 0.00 3.18
3257 3539 1.537348 CGTCTTGGTCTGGTCGTTGAA 60.537 52.381 0.00 0.00 0.00 2.69
3258 3540 1.865340 GTCTTGGTCTGGTCGTTGAAC 59.135 52.381 0.00 0.00 0.00 3.18
3259 3541 1.483004 TCTTGGTCTGGTCGTTGAACA 59.517 47.619 0.00 0.00 0.00 3.18
3260 3542 1.597663 CTTGGTCTGGTCGTTGAACAC 59.402 52.381 0.00 0.00 28.71 3.32
3261 3543 0.537653 TGGTCTGGTCGTTGAACACA 59.462 50.000 0.00 0.00 0.00 3.72
3262 3544 1.066071 TGGTCTGGTCGTTGAACACAA 60.066 47.619 0.00 0.00 0.00 3.33
3263 3545 2.011222 GGTCTGGTCGTTGAACACAAA 58.989 47.619 0.00 0.00 0.00 2.83
3264 3546 2.223180 GGTCTGGTCGTTGAACACAAAC 60.223 50.000 0.00 0.00 0.00 2.93
3265 3547 1.661617 TCTGGTCGTTGAACACAAACG 59.338 47.619 2.45 2.45 0.00 3.60
3266 3548 1.661617 CTGGTCGTTGAACACAAACGA 59.338 47.619 7.26 7.26 0.00 3.85
3267 3549 2.074576 TGGTCGTTGAACACAAACGAA 58.925 42.857 12.38 0.00 33.19 3.85
3268 3550 2.094575 TGGTCGTTGAACACAAACGAAG 59.905 45.455 12.38 0.00 33.19 3.79
3270 3552 3.306703 GGTCGTTGAACACAAACGAAGTA 59.693 43.478 12.38 0.00 45.00 2.24
3271 3553 4.258331 GTCGTTGAACACAAACGAAGTAC 58.742 43.478 12.38 0.00 45.00 2.73
3272 3554 3.000872 TCGTTGAACACAAACGAAGTACG 60.001 43.478 8.77 0.00 45.00 3.67
3273 3555 3.024313 GTTGAACACAAACGAAGTACGC 58.976 45.455 0.00 0.00 45.00 4.42
3274 3556 1.255859 TGAACACAAACGAAGTACGCG 59.744 47.619 3.53 3.53 45.00 6.01
3275 3557 1.518102 GAACACAAACGAAGTACGCGA 59.482 47.619 15.93 0.00 45.00 5.87
3276 3558 1.558741 ACACAAACGAAGTACGCGAA 58.441 45.000 15.93 0.00 45.00 4.70
3277 3559 1.519758 ACACAAACGAAGTACGCGAAG 59.480 47.619 15.93 0.00 45.00 3.79
3278 3560 1.519758 CACAAACGAAGTACGCGAAGT 59.480 47.619 15.93 0.00 45.00 3.01
3279 3561 2.034339 CACAAACGAAGTACGCGAAGTT 60.034 45.455 15.93 1.43 45.00 2.66
3280 3562 2.034339 ACAAACGAAGTACGCGAAGTTG 60.034 45.455 15.93 16.36 45.00 3.16
3281 3563 0.505655 AACGAAGTACGCGAAGTTGC 59.494 50.000 15.93 0.00 45.00 4.17
3282 3564 0.595567 ACGAAGTACGCGAAGTTGCA 60.596 50.000 15.93 0.00 46.94 4.08
3283 3565 0.091344 CGAAGTACGCGAAGTTGCAG 59.909 55.000 15.93 0.00 34.51 4.41
3284 3566 0.179248 GAAGTACGCGAAGTTGCAGC 60.179 55.000 15.93 0.00 34.15 5.25
3285 3567 0.600255 AAGTACGCGAAGTTGCAGCT 60.600 50.000 15.93 0.00 34.15 4.24
3286 3568 0.242825 AGTACGCGAAGTTGCAGCTA 59.757 50.000 15.93 0.00 34.15 3.32
3287 3569 1.135083 AGTACGCGAAGTTGCAGCTAT 60.135 47.619 15.93 0.00 34.15 2.97
3288 3570 1.005975 GTACGCGAAGTTGCAGCTATG 60.006 52.381 15.93 0.17 34.15 2.23
3289 3571 1.349627 CGCGAAGTTGCAGCTATGG 59.650 57.895 2.53 0.00 34.15 2.74
3290 3572 1.063166 GCGAAGTTGCAGCTATGGC 59.937 57.895 2.53 4.07 39.06 4.40
3291 3573 1.349627 CGAAGTTGCAGCTATGGCG 59.650 57.895 2.53 2.19 44.37 5.69
3292 3574 1.083806 CGAAGTTGCAGCTATGGCGA 61.084 55.000 2.53 0.00 44.37 5.54
3293 3575 1.086696 GAAGTTGCAGCTATGGCGAA 58.913 50.000 2.53 0.00 44.37 4.70
3294 3576 1.672881 GAAGTTGCAGCTATGGCGAAT 59.327 47.619 2.53 0.00 44.37 3.34
3295 3577 1.755179 AGTTGCAGCTATGGCGAATT 58.245 45.000 0.00 0.00 44.37 2.17
3296 3578 2.094675 AGTTGCAGCTATGGCGAATTT 58.905 42.857 0.00 0.00 44.37 1.82
3297 3579 2.493278 AGTTGCAGCTATGGCGAATTTT 59.507 40.909 0.00 0.00 44.37 1.82
3298 3580 3.056607 AGTTGCAGCTATGGCGAATTTTT 60.057 39.130 0.00 0.00 44.37 1.94
3299 3581 4.157656 AGTTGCAGCTATGGCGAATTTTTA 59.842 37.500 0.00 0.00 44.37 1.52
3300 3582 4.710423 TGCAGCTATGGCGAATTTTTAA 57.290 36.364 0.00 0.00 44.37 1.52
3301 3583 5.261209 TGCAGCTATGGCGAATTTTTAAT 57.739 34.783 0.00 0.00 44.37 1.40
3302 3584 5.280945 TGCAGCTATGGCGAATTTTTAATC 58.719 37.500 0.00 0.00 44.37 1.75
3303 3585 5.067674 TGCAGCTATGGCGAATTTTTAATCT 59.932 36.000 0.00 0.00 44.37 2.40
3304 3586 6.262049 TGCAGCTATGGCGAATTTTTAATCTA 59.738 34.615 0.00 0.00 44.37 1.98
3305 3587 7.138736 GCAGCTATGGCGAATTTTTAATCTAA 58.861 34.615 0.00 0.00 44.37 2.10
3306 3588 7.647715 GCAGCTATGGCGAATTTTTAATCTAAA 59.352 33.333 0.00 0.00 44.37 1.85
3307 3589 8.958043 CAGCTATGGCGAATTTTTAATCTAAAC 58.042 33.333 0.00 0.00 44.37 2.01
3308 3590 8.682710 AGCTATGGCGAATTTTTAATCTAAACA 58.317 29.630 0.00 0.00 44.37 2.83
3309 3591 9.296400 GCTATGGCGAATTTTTAATCTAAACAA 57.704 29.630 0.00 0.00 0.00 2.83
3313 3595 9.535878 TGGCGAATTTTTAATCTAAACAAAACT 57.464 25.926 0.00 0.00 0.00 2.66
3326 3608 9.931210 ATCTAAACAAAACTCAAAGTCTAAACG 57.069 29.630 0.00 0.00 0.00 3.60
3327 3609 9.153721 TCTAAACAAAACTCAAAGTCTAAACGA 57.846 29.630 0.00 0.00 0.00 3.85
3328 3610 9.207042 CTAAACAAAACTCAAAGTCTAAACGAC 57.793 33.333 0.00 0.00 43.17 4.34
3337 3619 1.918595 GTCTAAACGACGCCCTAAGG 58.081 55.000 0.00 0.00 32.04 2.69
3338 3620 1.470458 GTCTAAACGACGCCCTAAGGG 60.470 57.143 0.00 0.00 38.27 3.95
3339 3621 0.533951 CTAAACGACGCCCTAAGGGT 59.466 55.000 0.00 0.00 46.51 4.34
3340 3622 0.975887 TAAACGACGCCCTAAGGGTT 59.024 50.000 0.00 0.00 46.51 4.11
3341 3623 0.604511 AAACGACGCCCTAAGGGTTG 60.605 55.000 0.00 3.57 46.51 3.77
3342 3624 2.660802 CGACGCCCTAAGGGTTGT 59.339 61.111 0.00 0.00 46.51 3.32
3343 3625 1.892338 CGACGCCCTAAGGGTTGTA 59.108 57.895 0.00 0.00 46.51 2.41
3344 3626 0.462789 CGACGCCCTAAGGGTTGTAT 59.537 55.000 0.00 0.00 46.51 2.29
3345 3627 1.682854 CGACGCCCTAAGGGTTGTATA 59.317 52.381 0.00 0.00 46.51 1.47
3346 3628 2.298163 CGACGCCCTAAGGGTTGTATAT 59.702 50.000 0.00 0.00 46.51 0.86
3347 3629 3.507233 CGACGCCCTAAGGGTTGTATATA 59.493 47.826 0.00 0.00 46.51 0.86
3348 3630 4.159135 CGACGCCCTAAGGGTTGTATATAT 59.841 45.833 0.00 0.00 46.51 0.86
3349 3631 5.416271 ACGCCCTAAGGGTTGTATATATG 57.584 43.478 0.00 0.00 46.51 1.78
3350 3632 4.224370 ACGCCCTAAGGGTTGTATATATGG 59.776 45.833 0.00 0.00 46.51 2.74
3351 3633 4.468510 CGCCCTAAGGGTTGTATATATGGA 59.531 45.833 0.00 0.00 46.51 3.41
3352 3634 5.395324 CGCCCTAAGGGTTGTATATATGGAG 60.395 48.000 0.00 0.00 46.51 3.86
3353 3635 5.724854 GCCCTAAGGGTTGTATATATGGAGA 59.275 44.000 0.00 0.00 46.51 3.71
3354 3636 6.214819 GCCCTAAGGGTTGTATATATGGAGAA 59.785 42.308 0.00 0.00 46.51 2.87
3355 3637 7.256908 GCCCTAAGGGTTGTATATATGGAGAAA 60.257 40.741 0.00 0.00 46.51 2.52
3356 3638 8.322091 CCCTAAGGGTTGTATATATGGAGAAAG 58.678 40.741 0.00 0.00 38.25 2.62
3357 3639 9.101325 CCTAAGGGTTGTATATATGGAGAAAGA 57.899 37.037 0.00 0.00 0.00 2.52
3359 3641 7.560796 AGGGTTGTATATATGGAGAAAGAGG 57.439 40.000 0.00 0.00 0.00 3.69
3360 3642 6.502158 AGGGTTGTATATATGGAGAAAGAGGG 59.498 42.308 0.00 0.00 0.00 4.30
3361 3643 6.296489 GGGTTGTATATATGGAGAAAGAGGGG 60.296 46.154 0.00 0.00 0.00 4.79
3362 3644 6.296489 GGTTGTATATATGGAGAAAGAGGGGG 60.296 46.154 0.00 0.00 0.00 5.40
3380 3662 3.739613 GGGGGATTTCGTGGCCCT 61.740 66.667 0.00 0.00 41.72 5.19
3381 3663 2.359011 GGGGATTTCGTGGCCCTT 59.641 61.111 0.00 0.00 41.72 3.95
3382 3664 2.052104 GGGGATTTCGTGGCCCTTG 61.052 63.158 0.00 0.00 41.72 3.61
3383 3665 2.052104 GGGATTTCGTGGCCCTTGG 61.052 63.158 0.00 0.00 38.85 3.61
3384 3666 1.001393 GGATTTCGTGGCCCTTGGA 60.001 57.895 0.00 0.00 0.00 3.53
3385 3667 1.032114 GGATTTCGTGGCCCTTGGAG 61.032 60.000 0.00 0.00 0.00 3.86
3386 3668 1.000896 ATTTCGTGGCCCTTGGAGG 60.001 57.895 0.00 0.00 34.30 4.30
3387 3669 1.497309 ATTTCGTGGCCCTTGGAGGA 61.497 55.000 0.00 0.00 37.67 3.71
3388 3670 2.124507 TTTCGTGGCCCTTGGAGGAG 62.125 60.000 0.00 0.00 37.67 3.69
3389 3671 4.101448 CGTGGCCCTTGGAGGAGG 62.101 72.222 0.00 0.00 37.67 4.30
3395 3677 3.083997 CCTTGGAGGAGGGGTCCG 61.084 72.222 0.00 0.00 37.67 4.79
3396 3678 2.038975 CTTGGAGGAGGGGTCCGA 59.961 66.667 0.00 0.00 36.82 4.55
3397 3679 1.612442 CTTGGAGGAGGGGTCCGAA 60.612 63.158 0.00 0.00 36.82 4.30
3398 3680 1.151987 TTGGAGGAGGGGTCCGAAA 60.152 57.895 0.00 0.00 36.82 3.46
3399 3681 1.486145 TTGGAGGAGGGGTCCGAAAC 61.486 60.000 0.00 0.00 36.82 2.78
3410 3692 2.556144 GTCCGAAACCAACCCTAACT 57.444 50.000 0.00 0.00 0.00 2.24
3411 3693 2.420642 GTCCGAAACCAACCCTAACTC 58.579 52.381 0.00 0.00 0.00 3.01
3412 3694 2.038164 GTCCGAAACCAACCCTAACTCT 59.962 50.000 0.00 0.00 0.00 3.24
3413 3695 2.707257 TCCGAAACCAACCCTAACTCTT 59.293 45.455 0.00 0.00 0.00 2.85
3414 3696 2.812011 CCGAAACCAACCCTAACTCTTG 59.188 50.000 0.00 0.00 0.00 3.02
3415 3697 3.473625 CGAAACCAACCCTAACTCTTGT 58.526 45.455 0.00 0.00 0.00 3.16
3416 3698 3.881089 CGAAACCAACCCTAACTCTTGTT 59.119 43.478 0.00 0.00 39.98 2.83
3417 3699 4.337274 CGAAACCAACCCTAACTCTTGTTT 59.663 41.667 0.00 0.00 37.59 2.83
3418 3700 5.505159 CGAAACCAACCCTAACTCTTGTTTC 60.505 44.000 0.00 0.00 37.59 2.78
3419 3701 3.828921 ACCAACCCTAACTCTTGTTTCC 58.171 45.455 0.00 0.00 37.59 3.13
3420 3702 3.154710 CCAACCCTAACTCTTGTTTCCC 58.845 50.000 0.00 0.00 37.59 3.97
3421 3703 3.154710 CAACCCTAACTCTTGTTTCCCC 58.845 50.000 0.00 0.00 37.59 4.81
3422 3704 2.424793 ACCCTAACTCTTGTTTCCCCA 58.575 47.619 0.00 0.00 37.59 4.96
3423 3705 2.107726 ACCCTAACTCTTGTTTCCCCAC 59.892 50.000 0.00 0.00 37.59 4.61
3424 3706 2.107552 CCCTAACTCTTGTTTCCCCACA 59.892 50.000 0.00 0.00 37.59 4.17
3425 3707 3.146847 CCTAACTCTTGTTTCCCCACAC 58.853 50.000 0.00 0.00 37.59 3.82
3426 3708 2.818751 AACTCTTGTTTCCCCACACA 57.181 45.000 0.00 0.00 31.37 3.72
3427 3709 3.312736 AACTCTTGTTTCCCCACACAT 57.687 42.857 0.00 0.00 31.37 3.21
3428 3710 4.447138 AACTCTTGTTTCCCCACACATA 57.553 40.909 0.00 0.00 31.37 2.29
3429 3711 3.751518 ACTCTTGTTTCCCCACACATAC 58.248 45.455 0.00 0.00 0.00 2.39
3430 3712 2.742053 CTCTTGTTTCCCCACACATACG 59.258 50.000 0.00 0.00 0.00 3.06
3431 3713 1.810151 CTTGTTTCCCCACACATACGG 59.190 52.381 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
145 148 0.972471 TCCATTCTCGCTGCTCTGGA 60.972 55.000 0.00 0.03 0.00 3.86
153 156 0.616111 ACCACCTCTCCATTCTCGCT 60.616 55.000 0.00 0.00 0.00 4.93
189 192 0.605319 CCTTGGCCACAAACGAGCTA 60.605 55.000 3.88 0.00 35.89 3.32
306 309 6.961554 CCGCTTGACAGTGTTAATATTTCTTC 59.038 38.462 0.36 0.00 0.00 2.87
332 336 4.017591 TGACCATTAACTTGGATGTGGGAT 60.018 41.667 2.02 0.00 39.25 3.85
400 404 3.494251 CCAATTTTTGACAGGAAAAGCCG 59.506 43.478 0.00 0.00 43.43 5.52
479 483 7.086685 TCTTTGGACCCTACAAAAATCTACT 57.913 36.000 0.00 0.00 37.37 2.57
621 625 6.706055 ATCAACATATTGTATTACTCGCGG 57.294 37.500 6.13 0.00 37.11 6.46
695 700 6.697019 AGTGTTAGAACAAATGCAAATGACAC 59.303 34.615 8.89 10.94 41.21 3.67
817 823 6.018180 ACTGGTTCATCACGTTCTTTTCTAAC 60.018 38.462 0.00 0.00 0.00 2.34
875 881 0.514691 GCAAGTCTTTGACTCCTGCG 59.485 55.000 8.12 0.00 42.59 5.18
945 951 0.808453 CGTGGTCGTGGTCTTGTGTT 60.808 55.000 0.00 0.00 0.00 3.32
975 993 2.822561 TCTCTAACTCTCACTGCACCTG 59.177 50.000 0.00 0.00 0.00 4.00
1041 1063 1.739562 GCGGACCAGCTCAGAGTTG 60.740 63.158 7.30 7.30 0.00 3.16
1112 1167 0.750850 TATACAGCAGAGGCCGGTTC 59.249 55.000 1.90 0.98 42.56 3.62
1400 1455 4.246206 CGTGCCGCATGCCATCAG 62.246 66.667 13.15 0.00 40.16 2.90
1622 1678 3.535962 GCGGCTGAGGAGGAGGAG 61.536 72.222 0.00 0.00 0.00 3.69
1888 1944 1.136252 CACACGCTGAATTCGTTCCTG 60.136 52.381 0.04 0.00 38.19 3.86
2080 2136 3.825014 AGCAGAAATTGTCAACATCAGCT 59.175 39.130 11.36 11.36 0.00 4.24
2081 2137 4.170292 AGCAGAAATTGTCAACATCAGC 57.830 40.909 8.10 8.10 0.00 4.26
2293 2371 8.942338 ACACATAAGAAAAGGAAAAAGAAACC 57.058 30.769 0.00 0.00 0.00 3.27
2337 2419 0.108329 AGGACCCTTACAATCACGCG 60.108 55.000 3.53 3.53 0.00 6.01
2359 2441 2.050168 CAACACCGGCACATGCAC 60.050 61.111 0.00 0.00 44.36 4.57
2403 2485 3.885297 CCCTACATATGCCCAACTGAAAG 59.115 47.826 1.58 0.00 42.29 2.62
2404 2486 3.525609 TCCCTACATATGCCCAACTGAAA 59.474 43.478 1.58 0.00 0.00 2.69
2406 2488 2.770447 TCCCTACATATGCCCAACTGA 58.230 47.619 1.58 0.00 0.00 3.41
2407 2489 3.576078 TTCCCTACATATGCCCAACTG 57.424 47.619 1.58 0.00 0.00 3.16
2408 2490 4.601406 TTTTCCCTACATATGCCCAACT 57.399 40.909 1.58 0.00 0.00 3.16
2438 2520 3.615592 GCAACCAATCAACATGCAGATGT 60.616 43.478 0.00 0.00 45.24 3.06
2439 2521 2.927477 GCAACCAATCAACATGCAGATG 59.073 45.455 0.00 0.00 37.00 2.90
2440 2522 2.093869 GGCAACCAATCAACATGCAGAT 60.094 45.455 0.00 0.00 38.73 2.90
2441 2523 1.273048 GGCAACCAATCAACATGCAGA 59.727 47.619 0.00 0.00 38.73 4.26
2463 2726 5.837979 AGATGCAGATTACTAGAGGTGATGT 59.162 40.000 0.00 0.00 0.00 3.06
2468 2731 4.762765 CGGTAGATGCAGATTACTAGAGGT 59.237 45.833 0.00 0.00 0.00 3.85
2478 2741 2.225068 CCGTTTCGGTAGATGCAGAT 57.775 50.000 0.00 0.00 42.73 2.90
2540 2803 3.746045 TGTAACCAGACAACCAGACTC 57.254 47.619 0.00 0.00 0.00 3.36
2545 2808 4.819630 GTCTTGAATGTAACCAGACAACCA 59.180 41.667 0.00 0.00 31.83 3.67
2552 2815 5.296780 ACACAACTGTCTTGAATGTAACCAG 59.703 40.000 0.00 0.00 0.00 4.00
2562 2825 5.290493 AGGTTATCACACAACTGTCTTGA 57.710 39.130 0.00 0.00 0.00 3.02
2565 2828 3.904339 AGGAGGTTATCACACAACTGTCT 59.096 43.478 0.00 0.00 0.00 3.41
2578 2841 7.493499 CTCATCATATCAAGGAGGAGGTTAT 57.507 40.000 0.00 0.00 39.85 1.89
2591 2854 4.284490 GCCTCTGGTAACCTCATCATATCA 59.716 45.833 0.00 0.00 0.00 2.15
2629 2892 2.158827 TGTGTGCCTTGCTCTTGTTCTA 60.159 45.455 0.00 0.00 0.00 2.10
2656 2932 9.461312 TGTTAAACTTCTATGCATGGTTAAGAT 57.539 29.630 10.16 0.00 0.00 2.40
2685 2961 4.582656 TGTGCTGCAGTTTGGTTTAAGTAT 59.417 37.500 16.64 0.00 0.00 2.12
2737 3013 4.778534 AAATGAGCTCCTGTCATGTTTG 57.221 40.909 12.15 0.00 34.78 2.93
2744 3020 2.166664 ACCGACTAAATGAGCTCCTGTC 59.833 50.000 12.15 10.70 0.00 3.51
2806 3082 1.334869 CAATAACGAGGGCATGAAGGC 59.665 52.381 0.00 0.00 43.27 4.35
2810 3086 3.531538 GTCTTCAATAACGAGGGCATGA 58.468 45.455 0.00 0.00 0.00 3.07
2856 3132 4.382291 ACATGGTAACGTTCAAGTTGCTA 58.618 39.130 2.82 0.00 37.01 3.49
2901 3183 1.006813 ATCAGGGTTGGGCCACATTA 58.993 50.000 5.23 0.00 39.65 1.90
2904 3186 0.780637 TTAATCAGGGTTGGGCCACA 59.219 50.000 5.23 0.00 39.65 4.17
2932 3214 3.756727 GAGGGTGGTCGACGGGAC 61.757 72.222 9.92 5.98 45.31 4.46
2958 3240 3.028850 CGGGACACCTTTACCTCTATCA 58.971 50.000 0.00 0.00 33.28 2.15
2959 3241 3.294214 TCGGGACACCTTTACCTCTATC 58.706 50.000 0.00 0.00 33.28 2.08
2960 3242 3.393426 TCGGGACACCTTTACCTCTAT 57.607 47.619 0.00 0.00 33.28 1.98
2961 3243 2.905415 TCGGGACACCTTTACCTCTA 57.095 50.000 0.00 0.00 33.28 2.43
2962 3244 1.831736 CATCGGGACACCTTTACCTCT 59.168 52.381 0.00 0.00 33.28 3.69
2963 3245 1.553704 ACATCGGGACACCTTTACCTC 59.446 52.381 0.00 0.00 33.28 3.85
2964 3246 1.652947 ACATCGGGACACCTTTACCT 58.347 50.000 0.00 0.00 33.28 3.08
2965 3247 2.484742 AACATCGGGACACCTTTACC 57.515 50.000 0.00 0.00 33.28 2.85
2966 3248 2.414138 CGAAACATCGGGACACCTTTAC 59.586 50.000 0.00 0.00 33.28 2.01
2967 3249 2.299582 TCGAAACATCGGGACACCTTTA 59.700 45.455 0.00 0.00 33.28 1.85
2968 3250 1.071071 TCGAAACATCGGGACACCTTT 59.929 47.619 0.00 0.00 33.28 3.11
2969 3251 0.682852 TCGAAACATCGGGACACCTT 59.317 50.000 0.00 0.00 33.28 3.50
2970 3252 0.902531 ATCGAAACATCGGGACACCT 59.097 50.000 0.00 0.00 33.28 4.00
2971 3253 1.006832 CATCGAAACATCGGGACACC 58.993 55.000 0.00 0.00 0.00 4.16
2972 3254 1.927174 CTCATCGAAACATCGGGACAC 59.073 52.381 0.00 0.00 0.00 3.67
2973 3255 1.822371 TCTCATCGAAACATCGGGACA 59.178 47.619 0.00 0.00 0.00 4.02
2974 3256 2.579207 TCTCATCGAAACATCGGGAC 57.421 50.000 0.00 0.00 0.00 4.46
2975 3257 2.224042 CCATCTCATCGAAACATCGGGA 60.224 50.000 0.00 0.00 0.00 5.14
2976 3258 2.138320 CCATCTCATCGAAACATCGGG 58.862 52.381 0.00 0.00 0.00 5.14
2977 3259 2.541346 CACCATCTCATCGAAACATCGG 59.459 50.000 0.00 0.00 0.00 4.18
2978 3260 2.541346 CCACCATCTCATCGAAACATCG 59.459 50.000 0.00 0.00 0.00 3.84
2979 3261 2.289002 GCCACCATCTCATCGAAACATC 59.711 50.000 0.00 0.00 0.00 3.06
2980 3262 2.092753 AGCCACCATCTCATCGAAACAT 60.093 45.455 0.00 0.00 0.00 2.71
2981 3263 1.278985 AGCCACCATCTCATCGAAACA 59.721 47.619 0.00 0.00 0.00 2.83
2982 3264 2.029838 AGCCACCATCTCATCGAAAC 57.970 50.000 0.00 0.00 0.00 2.78
2983 3265 3.552890 CGATAGCCACCATCTCATCGAAA 60.553 47.826 0.00 0.00 37.95 3.46
2984 3266 2.029918 CGATAGCCACCATCTCATCGAA 60.030 50.000 0.00 0.00 37.95 3.71
2985 3267 1.541588 CGATAGCCACCATCTCATCGA 59.458 52.381 0.00 0.00 37.95 3.59
2986 3268 1.270826 ACGATAGCCACCATCTCATCG 59.729 52.381 0.00 0.00 40.68 3.84
2987 3269 3.393089 AACGATAGCCACCATCTCATC 57.607 47.619 0.00 0.00 42.67 2.92
2988 3270 3.389329 AGAAACGATAGCCACCATCTCAT 59.611 43.478 0.00 0.00 42.67 2.90
2989 3271 2.766263 AGAAACGATAGCCACCATCTCA 59.234 45.455 0.00 0.00 42.67 3.27
2990 3272 3.126831 CAGAAACGATAGCCACCATCTC 58.873 50.000 0.00 0.00 42.67 2.75
2991 3273 2.501723 ACAGAAACGATAGCCACCATCT 59.498 45.455 0.00 0.00 42.67 2.90
2992 3274 2.609459 CACAGAAACGATAGCCACCATC 59.391 50.000 0.00 0.00 42.67 3.51
2993 3275 2.632377 CACAGAAACGATAGCCACCAT 58.368 47.619 0.00 0.00 42.67 3.55
2994 3276 1.338674 CCACAGAAACGATAGCCACCA 60.339 52.381 0.00 0.00 42.67 4.17
2995 3277 1.369625 CCACAGAAACGATAGCCACC 58.630 55.000 0.00 0.00 42.67 4.61
2996 3278 1.066430 TCCCACAGAAACGATAGCCAC 60.066 52.381 0.00 0.00 42.67 5.01
2997 3279 1.207089 CTCCCACAGAAACGATAGCCA 59.793 52.381 0.00 0.00 42.67 4.75
2998 3280 1.207329 ACTCCCACAGAAACGATAGCC 59.793 52.381 0.00 0.00 42.67 3.93
2999 3281 2.541556 GACTCCCACAGAAACGATAGC 58.458 52.381 0.00 0.00 42.67 2.97
3000 3282 2.422479 TCGACTCCCACAGAAACGATAG 59.578 50.000 0.00 0.00 46.19 2.08
3001 3283 2.163010 GTCGACTCCCACAGAAACGATA 59.837 50.000 8.70 0.00 32.25 2.92
3002 3284 1.067776 GTCGACTCCCACAGAAACGAT 60.068 52.381 8.70 0.00 32.25 3.73
3003 3285 0.313043 GTCGACTCCCACAGAAACGA 59.687 55.000 8.70 0.00 0.00 3.85
3004 3286 0.666577 GGTCGACTCCCACAGAAACG 60.667 60.000 16.46 0.00 0.00 3.60
3005 3287 0.680061 AGGTCGACTCCCACAGAAAC 59.320 55.000 16.46 0.00 0.00 2.78
3006 3288 1.070134 CAAGGTCGACTCCCACAGAAA 59.930 52.381 16.46 0.00 0.00 2.52
3007 3289 0.679505 CAAGGTCGACTCCCACAGAA 59.320 55.000 16.46 0.00 0.00 3.02
3008 3290 0.178973 TCAAGGTCGACTCCCACAGA 60.179 55.000 16.46 1.75 0.00 3.41
3009 3291 0.038159 GTCAAGGTCGACTCCCACAG 60.038 60.000 16.46 0.00 32.92 3.66
3010 3292 1.802337 CGTCAAGGTCGACTCCCACA 61.802 60.000 16.46 0.00 33.54 4.17
3011 3293 1.080705 CGTCAAGGTCGACTCCCAC 60.081 63.158 16.46 6.83 33.54 4.61
3012 3294 0.611062 ATCGTCAAGGTCGACTCCCA 60.611 55.000 16.46 0.00 40.07 4.37
3013 3295 0.100861 GATCGTCAAGGTCGACTCCC 59.899 60.000 16.46 0.00 40.07 4.30
3014 3296 0.100861 GGATCGTCAAGGTCGACTCC 59.899 60.000 16.46 7.98 40.07 3.85
3015 3297 0.248134 CGGATCGTCAAGGTCGACTC 60.248 60.000 16.46 5.70 40.07 3.36
3016 3298 0.675837 TCGGATCGTCAAGGTCGACT 60.676 55.000 16.46 0.00 40.07 4.18
3017 3299 0.522915 GTCGGATCGTCAAGGTCGAC 60.523 60.000 7.13 7.13 40.07 4.20
3018 3300 0.675837 AGTCGGATCGTCAAGGTCGA 60.676 55.000 0.00 0.00 41.45 4.20
3019 3301 1.012086 TAGTCGGATCGTCAAGGTCG 58.988 55.000 0.00 0.00 0.00 4.79
3020 3302 1.267932 CGTAGTCGGATCGTCAAGGTC 60.268 57.143 0.00 0.00 0.00 3.85
3021 3303 0.731417 CGTAGTCGGATCGTCAAGGT 59.269 55.000 0.00 0.00 0.00 3.50
3022 3304 1.012086 TCGTAGTCGGATCGTCAAGG 58.988 55.000 0.00 0.00 37.69 3.61
3023 3305 2.438583 GTTCGTAGTCGGATCGTCAAG 58.561 52.381 0.00 0.00 37.69 3.02
3024 3306 1.201954 CGTTCGTAGTCGGATCGTCAA 60.202 52.381 0.00 0.00 37.69 3.18
3025 3307 0.371301 CGTTCGTAGTCGGATCGTCA 59.629 55.000 0.00 0.00 37.69 4.35
3026 3308 0.371645 ACGTTCGTAGTCGGATCGTC 59.628 55.000 0.00 0.00 35.14 4.20
3027 3309 0.095935 CACGTTCGTAGTCGGATCGT 59.904 55.000 0.00 0.00 37.96 3.73
3028 3310 1.192436 GCACGTTCGTAGTCGGATCG 61.192 60.000 0.00 0.00 37.69 3.69
3029 3311 1.192436 CGCACGTTCGTAGTCGGATC 61.192 60.000 0.00 0.00 37.69 3.36
3030 3312 1.226211 CGCACGTTCGTAGTCGGAT 60.226 57.895 0.00 0.00 37.69 4.18
3031 3313 2.174107 CGCACGTTCGTAGTCGGA 59.826 61.111 0.00 0.00 37.69 4.55
3032 3314 1.862147 CTCGCACGTTCGTAGTCGG 60.862 63.158 7.61 0.00 37.69 4.79
3033 3315 1.119015 GTCTCGCACGTTCGTAGTCG 61.119 60.000 7.61 3.03 38.55 4.18
3034 3316 1.119015 CGTCTCGCACGTTCGTAGTC 61.119 60.000 7.61 1.61 44.07 2.59
3035 3317 1.154525 CGTCTCGCACGTTCGTAGT 60.155 57.895 7.61 0.00 44.07 2.73
3036 3318 3.647026 CGTCTCGCACGTTCGTAG 58.353 61.111 7.61 4.27 44.07 3.51
3044 3326 2.791396 TAAGGCACGACGTCTCGCAC 62.791 60.000 22.48 14.11 44.33 5.34
3045 3327 2.523184 CTAAGGCACGACGTCTCGCA 62.523 60.000 22.48 6.45 44.33 5.10
3046 3328 1.868251 CTAAGGCACGACGTCTCGC 60.868 63.158 14.70 15.13 44.33 5.03
3047 3329 1.868251 GCTAAGGCACGACGTCTCG 60.868 63.158 14.70 4.33 46.06 4.04
3048 3330 1.211969 TGCTAAGGCACGACGTCTC 59.788 57.895 14.70 2.42 44.28 3.36
3049 3331 3.362262 TGCTAAGGCACGACGTCT 58.638 55.556 14.70 0.00 44.28 4.18
3064 3346 2.727916 CGGAAGTTGGTTTAGCGATTGC 60.728 50.000 0.00 0.00 43.24 3.56
3065 3347 2.739913 TCGGAAGTTGGTTTAGCGATTG 59.260 45.455 0.00 0.00 0.00 2.67
3066 3348 3.000727 CTCGGAAGTTGGTTTAGCGATT 58.999 45.455 0.00 0.00 0.00 3.34
3067 3349 2.618053 CTCGGAAGTTGGTTTAGCGAT 58.382 47.619 0.00 0.00 0.00 4.58
3068 3350 1.337447 CCTCGGAAGTTGGTTTAGCGA 60.337 52.381 0.00 0.00 0.00 4.93
3069 3351 1.076332 CCTCGGAAGTTGGTTTAGCG 58.924 55.000 0.00 0.00 0.00 4.26
3070 3352 1.450025 CCCTCGGAAGTTGGTTTAGC 58.550 55.000 0.00 0.00 0.00 3.09
3071 3353 1.350019 ACCCCTCGGAAGTTGGTTTAG 59.650 52.381 0.00 0.00 0.00 1.85
3072 3354 1.437397 ACCCCTCGGAAGTTGGTTTA 58.563 50.000 0.00 0.00 0.00 2.01
3073 3355 0.554305 AACCCCTCGGAAGTTGGTTT 59.446 50.000 0.00 0.00 35.12 3.27
3074 3356 1.437397 TAACCCCTCGGAAGTTGGTT 58.563 50.000 0.00 0.00 39.36 3.67
3075 3357 1.665137 ATAACCCCTCGGAAGTTGGT 58.335 50.000 2.73 0.00 0.00 3.67
3076 3358 2.026636 TCAATAACCCCTCGGAAGTTGG 60.027 50.000 2.73 0.00 0.00 3.77
3077 3359 3.007635 GTCAATAACCCCTCGGAAGTTG 58.992 50.000 2.73 0.00 0.00 3.16
3078 3360 2.026542 GGTCAATAACCCCTCGGAAGTT 60.027 50.000 0.00 0.00 42.85 2.66
3079 3361 1.558294 GGTCAATAACCCCTCGGAAGT 59.442 52.381 0.00 0.00 42.85 3.01
3080 3362 2.327200 GGTCAATAACCCCTCGGAAG 57.673 55.000 0.00 0.00 42.85 3.46
3090 3372 2.110352 CCCCGGCGTGGTCAATAAC 61.110 63.158 6.01 0.00 35.15 1.89
3091 3373 2.269562 CCCCGGCGTGGTCAATAA 59.730 61.111 6.01 0.00 35.15 1.40
3092 3374 4.476752 GCCCCGGCGTGGTCAATA 62.477 66.667 10.75 0.00 35.15 1.90
3103 3385 4.096003 AGGTTGATCGTGCCCCGG 62.096 66.667 0.00 0.00 37.11 5.73
3104 3386 2.819595 CAGGTTGATCGTGCCCCG 60.820 66.667 0.00 0.00 38.13 5.73
3105 3387 1.745489 GTCAGGTTGATCGTGCCCC 60.745 63.158 0.00 0.00 32.68 5.80
3106 3388 1.745489 GGTCAGGTTGATCGTGCCC 60.745 63.158 0.00 0.00 32.68 5.36
3107 3389 1.003839 TGGTCAGGTTGATCGTGCC 60.004 57.895 0.00 0.00 27.66 5.01
3108 3390 1.626654 CGTGGTCAGGTTGATCGTGC 61.627 60.000 0.00 0.00 27.66 5.34
3109 3391 0.038618 TCGTGGTCAGGTTGATCGTG 60.039 55.000 0.00 0.00 27.66 4.35
3110 3392 0.243907 CTCGTGGTCAGGTTGATCGT 59.756 55.000 0.00 0.00 27.66 3.73
3111 3393 0.458543 CCTCGTGGTCAGGTTGATCG 60.459 60.000 0.00 0.00 27.66 3.69
3112 3394 0.108138 CCCTCGTGGTCAGGTTGATC 60.108 60.000 2.33 0.00 0.00 2.92
3113 3395 1.983224 CCCTCGTGGTCAGGTTGAT 59.017 57.895 2.33 0.00 0.00 2.57
3114 3396 3.466881 CCCTCGTGGTCAGGTTGA 58.533 61.111 2.33 0.00 0.00 3.18
3123 3405 0.320771 CAGGAAACAGACCCTCGTGG 60.321 60.000 0.00 0.00 41.37 4.94
3124 3406 0.951040 GCAGGAAACAGACCCTCGTG 60.951 60.000 0.00 0.00 0.00 4.35
3125 3407 1.371558 GCAGGAAACAGACCCTCGT 59.628 57.895 0.00 0.00 0.00 4.18
3126 3408 1.738099 CGCAGGAAACAGACCCTCG 60.738 63.158 0.00 0.00 0.00 4.63
3127 3409 0.390472 CTCGCAGGAAACAGACCCTC 60.390 60.000 0.00 0.00 0.00 4.30
3128 3410 1.674057 CTCGCAGGAAACAGACCCT 59.326 57.895 0.00 0.00 0.00 4.34
3129 3411 2.035442 GCTCGCAGGAAACAGACCC 61.035 63.158 0.00 0.00 0.00 4.46
3130 3412 0.884704 TTGCTCGCAGGAAACAGACC 60.885 55.000 0.00 0.00 0.00 3.85
3131 3413 0.944386 TTTGCTCGCAGGAAACAGAC 59.056 50.000 0.00 0.00 30.42 3.51
3132 3414 3.395210 TTTGCTCGCAGGAAACAGA 57.605 47.368 0.00 0.00 30.42 3.41
3136 3418 0.586319 CTTCGTTTGCTCGCAGGAAA 59.414 50.000 0.00 0.12 33.04 3.13
3137 3419 0.249699 TCTTCGTTTGCTCGCAGGAA 60.250 50.000 0.00 0.00 0.00 3.36
3138 3420 0.249699 TTCTTCGTTTGCTCGCAGGA 60.250 50.000 0.00 0.00 0.00 3.86
3139 3421 0.110644 GTTCTTCGTTTGCTCGCAGG 60.111 55.000 0.00 0.00 0.00 4.85
3140 3422 0.581529 TGTTCTTCGTTTGCTCGCAG 59.418 50.000 0.00 0.00 0.00 5.18
3141 3423 1.003972 CTTGTTCTTCGTTTGCTCGCA 60.004 47.619 0.00 0.00 0.00 5.10
3142 3424 1.663494 CTTGTTCTTCGTTTGCTCGC 58.337 50.000 0.00 0.00 0.00 5.03
3143 3425 1.003972 TGCTTGTTCTTCGTTTGCTCG 60.004 47.619 0.00 0.00 0.00 5.03
3144 3426 2.755836 TGCTTGTTCTTCGTTTGCTC 57.244 45.000 0.00 0.00 0.00 4.26
3145 3427 2.682856 TCTTGCTTGTTCTTCGTTTGCT 59.317 40.909 0.00 0.00 0.00 3.91
3146 3428 3.065019 TCTTGCTTGTTCTTCGTTTGC 57.935 42.857 0.00 0.00 0.00 3.68
3147 3429 5.003778 CAGTTTCTTGCTTGTTCTTCGTTTG 59.996 40.000 0.00 0.00 0.00 2.93
3148 3430 5.095490 CAGTTTCTTGCTTGTTCTTCGTTT 58.905 37.500 0.00 0.00 0.00 3.60
3149 3431 4.394920 TCAGTTTCTTGCTTGTTCTTCGTT 59.605 37.500 0.00 0.00 0.00 3.85
3150 3432 3.938963 TCAGTTTCTTGCTTGTTCTTCGT 59.061 39.130 0.00 0.00 0.00 3.85
3151 3433 4.271049 TCTCAGTTTCTTGCTTGTTCTTCG 59.729 41.667 0.00 0.00 0.00 3.79
3152 3434 5.741388 TCTCAGTTTCTTGCTTGTTCTTC 57.259 39.130 0.00 0.00 0.00 2.87
3153 3435 6.501781 CAATCTCAGTTTCTTGCTTGTTCTT 58.498 36.000 0.00 0.00 0.00 2.52
3154 3436 5.506982 GCAATCTCAGTTTCTTGCTTGTTCT 60.507 40.000 0.00 0.00 40.55 3.01
3155 3437 4.678742 GCAATCTCAGTTTCTTGCTTGTTC 59.321 41.667 0.00 0.00 40.55 3.18
3156 3438 4.098349 TGCAATCTCAGTTTCTTGCTTGTT 59.902 37.500 7.52 0.00 43.33 2.83
3157 3439 3.633525 TGCAATCTCAGTTTCTTGCTTGT 59.366 39.130 7.52 0.00 43.33 3.16
3158 3440 4.233123 TGCAATCTCAGTTTCTTGCTTG 57.767 40.909 7.52 0.00 43.33 4.01
3159 3441 4.924305 TTGCAATCTCAGTTTCTTGCTT 57.076 36.364 0.00 0.00 43.33 3.91
3160 3442 4.765856 AGATTGCAATCTCAGTTTCTTGCT 59.234 37.500 31.78 9.33 41.82 3.91
3161 3443 5.056894 AGATTGCAATCTCAGTTTCTTGC 57.943 39.130 31.78 6.94 41.82 4.01
3162 3444 7.606858 TCTAGATTGCAATCTCAGTTTCTTG 57.393 36.000 38.37 18.38 44.30 3.02
3200 3482 8.910944 CCACCTTGATCAATAAATCTTTCATCT 58.089 33.333 8.96 0.00 0.00 2.90
3201 3483 8.139989 CCCACCTTGATCAATAAATCTTTCATC 58.860 37.037 8.96 0.00 0.00 2.92
3202 3484 7.070322 CCCCACCTTGATCAATAAATCTTTCAT 59.930 37.037 8.96 0.00 0.00 2.57
3203 3485 6.380846 CCCCACCTTGATCAATAAATCTTTCA 59.619 38.462 8.96 0.00 0.00 2.69
3204 3486 6.381133 ACCCCACCTTGATCAATAAATCTTTC 59.619 38.462 8.96 0.00 0.00 2.62
3205 3487 6.263754 ACCCCACCTTGATCAATAAATCTTT 58.736 36.000 8.96 0.00 0.00 2.52
3206 3488 5.842339 ACCCCACCTTGATCAATAAATCTT 58.158 37.500 8.96 0.00 0.00 2.40
3207 3489 5.472301 ACCCCACCTTGATCAATAAATCT 57.528 39.130 8.96 0.00 0.00 2.40
3208 3490 5.893824 AGAACCCCACCTTGATCAATAAATC 59.106 40.000 8.96 0.68 0.00 2.17
3209 3491 5.658190 CAGAACCCCACCTTGATCAATAAAT 59.342 40.000 8.96 0.00 0.00 1.40
3210 3492 5.016173 CAGAACCCCACCTTGATCAATAAA 58.984 41.667 8.96 0.00 0.00 1.40
3211 3493 4.044065 ACAGAACCCCACCTTGATCAATAA 59.956 41.667 8.96 0.00 0.00 1.40
3212 3494 3.591527 ACAGAACCCCACCTTGATCAATA 59.408 43.478 8.96 0.00 0.00 1.90
3213 3495 2.379907 ACAGAACCCCACCTTGATCAAT 59.620 45.455 8.96 0.00 0.00 2.57
3214 3496 1.780309 ACAGAACCCCACCTTGATCAA 59.220 47.619 8.12 8.12 0.00 2.57
3215 3497 1.073763 CACAGAACCCCACCTTGATCA 59.926 52.381 0.00 0.00 0.00 2.92
3216 3498 1.351017 TCACAGAACCCCACCTTGATC 59.649 52.381 0.00 0.00 0.00 2.92
3217 3499 1.073923 GTCACAGAACCCCACCTTGAT 59.926 52.381 0.00 0.00 0.00 2.57
3218 3500 0.472471 GTCACAGAACCCCACCTTGA 59.528 55.000 0.00 0.00 0.00 3.02
3219 3501 0.884704 CGTCACAGAACCCCACCTTG 60.885 60.000 0.00 0.00 0.00 3.61
3220 3502 1.342672 ACGTCACAGAACCCCACCTT 61.343 55.000 0.00 0.00 0.00 3.50
3221 3503 1.755393 GACGTCACAGAACCCCACCT 61.755 60.000 11.55 0.00 0.00 4.00
3222 3504 1.301479 GACGTCACAGAACCCCACC 60.301 63.158 11.55 0.00 0.00 4.61
3223 3505 0.106149 AAGACGTCACAGAACCCCAC 59.894 55.000 19.50 0.00 0.00 4.61
3224 3506 0.105964 CAAGACGTCACAGAACCCCA 59.894 55.000 19.50 0.00 0.00 4.96
3225 3507 0.602905 CCAAGACGTCACAGAACCCC 60.603 60.000 19.50 0.00 0.00 4.95
3226 3508 0.106149 ACCAAGACGTCACAGAACCC 59.894 55.000 19.50 0.00 0.00 4.11
3227 3509 1.068741 AGACCAAGACGTCACAGAACC 59.931 52.381 19.50 0.46 35.07 3.62
3228 3510 2.128035 CAGACCAAGACGTCACAGAAC 58.872 52.381 19.50 4.56 35.07 3.01
3229 3511 1.068588 CCAGACCAAGACGTCACAGAA 59.931 52.381 19.50 0.00 35.07 3.02
3230 3512 0.673985 CCAGACCAAGACGTCACAGA 59.326 55.000 19.50 0.00 35.07 3.41
3231 3513 0.389391 ACCAGACCAAGACGTCACAG 59.611 55.000 19.50 7.75 35.07 3.66
3232 3514 0.387929 GACCAGACCAAGACGTCACA 59.612 55.000 19.50 0.00 35.07 3.58
3233 3515 0.663568 CGACCAGACCAAGACGTCAC 60.664 60.000 19.50 3.64 35.07 3.67
3234 3516 1.105167 ACGACCAGACCAAGACGTCA 61.105 55.000 19.50 0.00 35.07 4.35
3235 3517 0.031721 AACGACCAGACCAAGACGTC 59.968 55.000 7.70 7.70 33.59 4.34
3236 3518 0.249322 CAACGACCAGACCAAGACGT 60.249 55.000 0.00 0.00 35.56 4.34
3237 3519 0.031585 TCAACGACCAGACCAAGACG 59.968 55.000 0.00 0.00 0.00 4.18
3238 3520 1.865340 GTTCAACGACCAGACCAAGAC 59.135 52.381 0.00 0.00 0.00 3.01
3239 3521 1.483004 TGTTCAACGACCAGACCAAGA 59.517 47.619 0.00 0.00 0.00 3.02
3240 3522 1.597663 GTGTTCAACGACCAGACCAAG 59.402 52.381 0.00 0.00 0.00 3.61
3241 3523 1.066071 TGTGTTCAACGACCAGACCAA 60.066 47.619 0.00 0.00 0.00 3.67
3242 3524 0.537653 TGTGTTCAACGACCAGACCA 59.462 50.000 0.00 0.00 0.00 4.02
3243 3525 1.658994 TTGTGTTCAACGACCAGACC 58.341 50.000 0.00 0.00 0.00 3.85
3244 3526 2.536130 CGTTTGTGTTCAACGACCAGAC 60.536 50.000 0.00 0.00 33.48 3.51
3245 3527 1.661617 CGTTTGTGTTCAACGACCAGA 59.338 47.619 0.00 0.00 33.48 3.86
3246 3528 1.661617 TCGTTTGTGTTCAACGACCAG 59.338 47.619 3.87 0.00 34.74 4.00
3247 3529 1.723220 TCGTTTGTGTTCAACGACCA 58.277 45.000 3.87 0.00 34.74 4.02
3248 3530 2.094734 ACTTCGTTTGTGTTCAACGACC 59.905 45.455 7.37 0.00 37.09 4.79
3249 3531 3.378959 ACTTCGTTTGTGTTCAACGAC 57.621 42.857 7.37 0.00 37.09 4.34
3250 3532 3.000872 CGTACTTCGTTTGTGTTCAACGA 60.001 43.478 3.87 3.87 36.33 3.85
3251 3533 3.266067 CGTACTTCGTTTGTGTTCAACG 58.734 45.455 0.00 0.00 32.93 4.10
3252 3534 3.024313 GCGTACTTCGTTTGTGTTCAAC 58.976 45.455 0.00 0.00 42.13 3.18
3253 3535 2.285141 CGCGTACTTCGTTTGTGTTCAA 60.285 45.455 0.00 0.00 42.13 2.69
3254 3536 1.255859 CGCGTACTTCGTTTGTGTTCA 59.744 47.619 0.00 0.00 42.13 3.18
3255 3537 1.518102 TCGCGTACTTCGTTTGTGTTC 59.482 47.619 5.77 0.00 42.13 3.18
3256 3538 1.558741 TCGCGTACTTCGTTTGTGTT 58.441 45.000 5.77 0.00 42.13 3.32
3257 3539 1.519758 CTTCGCGTACTTCGTTTGTGT 59.480 47.619 5.77 0.00 42.13 3.72
3258 3540 1.519758 ACTTCGCGTACTTCGTTTGTG 59.480 47.619 5.77 0.00 42.13 3.33
3259 3541 1.843992 ACTTCGCGTACTTCGTTTGT 58.156 45.000 5.77 0.00 42.13 2.83
3260 3542 2.546665 CAACTTCGCGTACTTCGTTTG 58.453 47.619 5.77 0.00 42.13 2.93
3261 3543 1.071041 GCAACTTCGCGTACTTCGTTT 60.071 47.619 5.77 0.00 42.13 3.60
3262 3544 0.505655 GCAACTTCGCGTACTTCGTT 59.494 50.000 5.77 0.00 42.13 3.85
3263 3545 0.595567 TGCAACTTCGCGTACTTCGT 60.596 50.000 5.77 0.00 42.13 3.85
3264 3546 0.091344 CTGCAACTTCGCGTACTTCG 59.909 55.000 5.77 0.00 43.12 3.79
3265 3547 0.179248 GCTGCAACTTCGCGTACTTC 60.179 55.000 5.77 0.00 33.35 3.01
3266 3548 0.600255 AGCTGCAACTTCGCGTACTT 60.600 50.000 5.77 0.00 33.35 2.24
3267 3549 0.242825 TAGCTGCAACTTCGCGTACT 59.757 50.000 5.77 0.00 33.35 2.73
3268 3550 1.005975 CATAGCTGCAACTTCGCGTAC 60.006 52.381 5.77 0.00 33.35 3.67
3269 3551 1.277326 CATAGCTGCAACTTCGCGTA 58.723 50.000 5.77 0.00 33.35 4.42
3270 3552 1.361668 CCATAGCTGCAACTTCGCGT 61.362 55.000 5.77 0.00 33.35 6.01
3271 3553 1.349627 CCATAGCTGCAACTTCGCG 59.650 57.895 0.00 0.00 33.35 5.87
3272 3554 1.063166 GCCATAGCTGCAACTTCGC 59.937 57.895 1.02 0.00 35.50 4.70
3273 3555 1.083806 TCGCCATAGCTGCAACTTCG 61.084 55.000 1.02 0.00 36.60 3.79
3274 3556 1.086696 TTCGCCATAGCTGCAACTTC 58.913 50.000 1.02 0.00 36.60 3.01
3275 3557 1.755179 ATTCGCCATAGCTGCAACTT 58.245 45.000 1.02 0.00 36.60 2.66
3276 3558 1.755179 AATTCGCCATAGCTGCAACT 58.245 45.000 1.02 0.00 36.60 3.16
3277 3559 2.566952 AAATTCGCCATAGCTGCAAC 57.433 45.000 1.02 0.00 36.60 4.17
3278 3560 3.591196 AAAAATTCGCCATAGCTGCAA 57.409 38.095 1.02 0.00 36.60 4.08
3279 3561 4.710423 TTAAAAATTCGCCATAGCTGCA 57.290 36.364 1.02 0.00 36.60 4.41
3280 3562 5.523369 AGATTAAAAATTCGCCATAGCTGC 58.477 37.500 0.00 0.00 36.60 5.25
3281 3563 8.958043 GTTTAGATTAAAAATTCGCCATAGCTG 58.042 33.333 0.00 0.00 36.60 4.24
3282 3564 8.682710 TGTTTAGATTAAAAATTCGCCATAGCT 58.317 29.630 0.00 0.00 36.60 3.32
3283 3565 8.850454 TGTTTAGATTAAAAATTCGCCATAGC 57.150 30.769 0.00 0.00 0.00 2.97
3287 3569 9.535878 AGTTTTGTTTAGATTAAAAATTCGCCA 57.464 25.926 0.00 0.00 0.00 5.69
3300 3582 9.931210 CGTTTAGACTTTGAGTTTTGTTTAGAT 57.069 29.630 0.00 0.00 0.00 1.98
3301 3583 9.153721 TCGTTTAGACTTTGAGTTTTGTTTAGA 57.846 29.630 0.00 0.00 0.00 2.10
3302 3584 9.207042 GTCGTTTAGACTTTGAGTTTTGTTTAG 57.793 33.333 0.00 0.00 46.13 1.85
3315 3597 6.652316 CCCTTAGGGCGTCGTTTAGACTTT 62.652 50.000 3.52 0.00 40.58 2.66
3316 3598 5.237925 CCCTTAGGGCGTCGTTTAGACTT 62.238 52.174 3.52 0.00 40.58 3.01
3317 3599 3.786523 CCCTTAGGGCGTCGTTTAGACT 61.787 54.545 3.52 0.00 40.58 3.24
3318 3600 1.470458 CCCTTAGGGCGTCGTTTAGAC 60.470 57.143 3.52 0.00 39.21 2.59
3319 3601 0.819582 CCCTTAGGGCGTCGTTTAGA 59.180 55.000 3.52 0.00 35.35 2.10
3320 3602 3.357504 CCCTTAGGGCGTCGTTTAG 57.642 57.895 3.52 0.00 35.35 1.85
3331 3613 9.101325 TCTTTCTCCATATATACAACCCTTAGG 57.899 37.037 0.00 0.00 40.04 2.69
3333 3615 9.101325 CCTCTTTCTCCATATATACAACCCTTA 57.899 37.037 0.00 0.00 0.00 2.69
3334 3616 7.017651 CCCTCTTTCTCCATATATACAACCCTT 59.982 40.741 0.00 0.00 0.00 3.95
3335 3617 6.502158 CCCTCTTTCTCCATATATACAACCCT 59.498 42.308 0.00 0.00 0.00 4.34
3336 3618 6.296489 CCCCTCTTTCTCCATATATACAACCC 60.296 46.154 0.00 0.00 0.00 4.11
3337 3619 6.296489 CCCCCTCTTTCTCCATATATACAACC 60.296 46.154 0.00 0.00 0.00 3.77
3338 3620 6.712276 CCCCCTCTTTCTCCATATATACAAC 58.288 44.000 0.00 0.00 0.00 3.32
3339 3621 6.952605 CCCCCTCTTTCTCCATATATACAA 57.047 41.667 0.00 0.00 0.00 2.41
3363 3645 3.296842 AAGGGCCACGAAATCCCCC 62.297 63.158 6.18 0.00 40.97 5.40
3364 3646 2.052104 CAAGGGCCACGAAATCCCC 61.052 63.158 6.18 0.00 40.97 4.81
3365 3647 2.052104 CCAAGGGCCACGAAATCCC 61.052 63.158 6.18 0.00 40.36 3.85
3366 3648 1.001393 TCCAAGGGCCACGAAATCC 60.001 57.895 6.18 0.00 0.00 3.01
3367 3649 1.032114 CCTCCAAGGGCCACGAAATC 61.032 60.000 6.18 0.00 0.00 2.17
3368 3650 1.000896 CCTCCAAGGGCCACGAAAT 60.001 57.895 6.18 0.00 0.00 2.17
3369 3651 2.124507 CTCCTCCAAGGGCCACGAAA 62.125 60.000 6.18 0.00 35.59 3.46
3370 3652 2.528127 TCCTCCAAGGGCCACGAA 60.528 61.111 6.18 0.00 35.59 3.85
3371 3653 3.003173 CTCCTCCAAGGGCCACGA 61.003 66.667 6.18 0.00 35.59 4.35
3372 3654 4.101448 CCTCCTCCAAGGGCCACG 62.101 72.222 6.18 0.00 35.59 4.94
3378 3660 3.083997 CGGACCCCTCCTCCAAGG 61.084 72.222 0.00 0.00 36.46 3.61
3379 3661 1.198759 TTTCGGACCCCTCCTCCAAG 61.199 60.000 0.00 0.00 33.79 3.61
3380 3662 1.151987 TTTCGGACCCCTCCTCCAA 60.152 57.895 0.00 0.00 33.79 3.53
3381 3663 1.916777 GTTTCGGACCCCTCCTCCA 60.917 63.158 0.00 0.00 33.79 3.86
3382 3664 2.667108 GGTTTCGGACCCCTCCTCC 61.667 68.421 0.00 0.00 43.06 4.30
3383 3665 2.987962 GGTTTCGGACCCCTCCTC 59.012 66.667 0.00 0.00 43.06 3.71
3391 3673 2.038164 AGAGTTAGGGTTGGTTTCGGAC 59.962 50.000 0.00 0.00 0.00 4.79
3392 3674 2.332117 AGAGTTAGGGTTGGTTTCGGA 58.668 47.619 0.00 0.00 0.00 4.55
3393 3675 2.812011 CAAGAGTTAGGGTTGGTTTCGG 59.188 50.000 0.00 0.00 0.00 4.30
3394 3676 3.473625 ACAAGAGTTAGGGTTGGTTTCG 58.526 45.455 0.00 0.00 0.00 3.46
3395 3677 5.221185 GGAAACAAGAGTTAGGGTTGGTTTC 60.221 44.000 0.00 0.00 36.84 2.78
3396 3678 4.647853 GGAAACAAGAGTTAGGGTTGGTTT 59.352 41.667 0.00 0.00 36.84 3.27
3397 3679 4.212716 GGAAACAAGAGTTAGGGTTGGTT 58.787 43.478 0.00 0.00 36.84 3.67
3398 3680 3.436035 GGGAAACAAGAGTTAGGGTTGGT 60.436 47.826 0.00 0.00 36.84 3.67
3399 3681 3.154710 GGGAAACAAGAGTTAGGGTTGG 58.845 50.000 0.00 0.00 36.84 3.77
3400 3682 3.154710 GGGGAAACAAGAGTTAGGGTTG 58.845 50.000 0.00 0.00 36.84 3.77
3401 3683 2.787035 TGGGGAAACAAGAGTTAGGGTT 59.213 45.455 0.00 0.00 36.84 4.11
3402 3684 2.107726 GTGGGGAAACAAGAGTTAGGGT 59.892 50.000 0.00 0.00 36.84 4.34
3403 3685 2.107552 TGTGGGGAAACAAGAGTTAGGG 59.892 50.000 0.00 0.00 36.84 3.53
3404 3686 3.146847 GTGTGGGGAAACAAGAGTTAGG 58.853 50.000 0.00 0.00 36.84 2.69
3405 3687 3.815809 TGTGTGGGGAAACAAGAGTTAG 58.184 45.455 0.00 0.00 36.84 2.34
3406 3688 3.935818 TGTGTGGGGAAACAAGAGTTA 57.064 42.857 0.00 0.00 36.84 2.24
3407 3689 2.818751 TGTGTGGGGAAACAAGAGTT 57.181 45.000 0.00 0.00 40.40 3.01
3408 3690 3.751518 GTATGTGTGGGGAAACAAGAGT 58.248 45.455 0.00 0.00 0.00 3.24
3409 3691 2.742053 CGTATGTGTGGGGAAACAAGAG 59.258 50.000 0.00 0.00 0.00 2.85
3410 3692 2.551287 CCGTATGTGTGGGGAAACAAGA 60.551 50.000 0.00 0.00 0.00 3.02
3411 3693 1.810151 CCGTATGTGTGGGGAAACAAG 59.190 52.381 0.00 0.00 0.00 3.16
3412 3694 1.898902 CCGTATGTGTGGGGAAACAA 58.101 50.000 0.00 0.00 0.00 2.83
3413 3695 3.635271 CCGTATGTGTGGGGAAACA 57.365 52.632 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.