Multiple sequence alignment - TraesCS5A01G123600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G123600 chr5A 100.000 5697 0 0 1 5697 270150915 270156611 0.000000e+00 10521.0
1 TraesCS5A01G123600 chr5A 96.396 111 0 1 5116 5222 306879121 306879011 4.540000e-41 180.0
2 TraesCS5A01G123600 chr5A 94.017 117 3 1 5115 5227 9610327 9610211 2.110000e-39 174.0
3 TraesCS5A01G123600 chr5A 90.226 133 6 4 5107 5235 392583831 392583702 3.530000e-37 167.0
4 TraesCS5A01G123600 chr5B 94.953 2140 75 12 1810 3923 222353745 222355877 0.000000e+00 3323.0
5 TraesCS5A01G123600 chr5B 92.838 1103 40 12 4003 5105 222355873 222356936 0.000000e+00 1563.0
6 TraesCS5A01G123600 chr5B 88.848 825 71 17 224 1031 222352207 222353027 0.000000e+00 994.0
7 TraesCS5A01G123600 chr5B 89.022 583 62 2 4119 4699 694693555 694694137 0.000000e+00 721.0
8 TraesCS5A01G123600 chr5B 84.242 660 81 17 4199 4842 694315233 694314581 6.270000e-174 621.0
9 TraesCS5A01G123600 chr5B 92.000 375 29 1 5324 5697 222357033 222357407 5.060000e-145 525.0
10 TraesCS5A01G123600 chr5B 87.389 452 55 2 3398 3848 694692856 694693306 8.460000e-143 518.0
11 TraesCS5A01G123600 chr5B 82.906 117 18 2 2223 2338 694692608 694692723 2.810000e-18 104.0
12 TraesCS5A01G123600 chr5B 73.333 225 58 2 4281 4504 416418861 416419084 1.320000e-11 82.4
13 TraesCS5A01G123600 chr5B 77.632 152 21 7 860 999 694692239 694692389 4.730000e-11 80.5
14 TraesCS5A01G123600 chr5D 94.993 1498 56 4 1807 3292 209300809 209302299 0.000000e+00 2333.0
15 TraesCS5A01G123600 chr5D 93.106 1175 58 17 393 1552 209299646 209300812 0.000000e+00 1700.0
16 TraesCS5A01G123600 chr5D 92.498 1093 38 10 4003 5095 209303206 209304254 0.000000e+00 1524.0
17 TraesCS5A01G123600 chr5D 94.984 638 27 4 3290 3922 209302572 209303209 0.000000e+00 996.0
18 TraesCS5A01G123600 chr5D 89.310 580 61 1 4120 4699 556140818 556140240 0.000000e+00 726.0
19 TraesCS5A01G123600 chr5D 88.274 452 51 2 3398 3848 556141519 556141069 1.810000e-149 540.0
20 TraesCS5A01G123600 chr5D 83.667 300 34 9 26 317 209299321 209299613 9.410000e-68 268.0
21 TraesCS5A01G123600 chr5D 96.000 150 5 1 5244 5392 209304280 209304429 5.700000e-60 243.0
22 TraesCS5A01G123600 chr5D 84.615 117 16 2 2223 2338 556141767 556141652 1.300000e-21 115.0
23 TraesCS5A01G123600 chr5D 78.808 151 21 5 860 999 556142136 556141986 2.190000e-14 91.6
24 TraesCS5A01G123600 chr4A 86.475 732 80 14 4127 4842 613582051 613581323 0.000000e+00 785.0
25 TraesCS5A01G123600 chr4A 84.575 577 69 9 4127 4697 613675543 613676105 6.450000e-154 555.0
26 TraesCS5A01G123600 chr4A 87.832 452 53 2 3398 3848 613582692 613582242 3.910000e-146 529.0
27 TraesCS5A01G123600 chr4A 88.104 269 30 2 1549 1815 723602531 723602263 9.210000e-83 318.0
28 TraesCS5A01G123600 chr4A 79.470 151 20 6 860 999 613583124 613582974 4.700000e-16 97.1
29 TraesCS5A01G123600 chr6D 88.930 271 28 2 1540 1808 151317203 151317473 3.290000e-87 333.0
30 TraesCS5A01G123600 chr6D 91.270 126 6 2 5110 5231 63720136 63720260 3.530000e-37 167.0
31 TraesCS5A01G123600 chr3B 89.394 264 27 1 1549 1811 168523551 168523814 1.180000e-86 331.0
32 TraesCS5A01G123600 chr7D 88.889 270 26 4 1549 1815 17848984 17849252 4.260000e-86 329.0
33 TraesCS5A01G123600 chr2D 89.313 262 27 1 1549 1809 64978228 64978489 1.530000e-85 327.0
34 TraesCS5A01G123600 chr2D 88.321 274 29 3 1540 1811 481282204 481281932 5.500000e-85 326.0
35 TraesCS5A01G123600 chr2D 87.591 274 33 1 1549 1821 638340871 638340598 3.310000e-82 316.0
36 TraesCS5A01G123600 chr2B 88.722 266 29 1 1548 1812 797642681 797642946 1.980000e-84 324.0
37 TraesCS5A01G123600 chr4B 88.192 271 30 2 1551 1820 418510980 418510711 7.120000e-84 322.0
38 TraesCS5A01G123600 chr1D 92.517 147 9 2 2242 2386 488954141 488953995 5.780000e-50 209.0
39 TraesCS5A01G123600 chr3D 94.872 117 2 1 5115 5227 308274906 308275022 4.540000e-41 180.0
40 TraesCS5A01G123600 chr3D 90.698 129 7 2 5110 5234 571704860 571704733 3.530000e-37 167.0
41 TraesCS5A01G123600 chr2A 94.828 116 2 2 5112 5223 507071159 507071274 1.630000e-40 178.0
42 TraesCS5A01G123600 chr3A 93.220 118 4 3 5115 5231 19182063 19182177 2.730000e-38 171.0
43 TraesCS5A01G123600 chr3A 92.000 125 4 5 5114 5232 333306256 333306132 2.730000e-38 171.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G123600 chr5A 270150915 270156611 5696 False 10521.000000 10521 100.000000 1 5697 1 chr5A.!!$F1 5696
1 TraesCS5A01G123600 chr5B 222352207 222357407 5200 False 1601.250000 3323 92.159750 224 5697 4 chr5B.!!$F2 5473
2 TraesCS5A01G123600 chr5B 694314581 694315233 652 True 621.000000 621 84.242000 4199 4842 1 chr5B.!!$R1 643
3 TraesCS5A01G123600 chr5B 694692239 694694137 1898 False 355.875000 721 84.237250 860 4699 4 chr5B.!!$F3 3839
4 TraesCS5A01G123600 chr5D 209299321 209304429 5108 False 1177.333333 2333 92.541333 26 5392 6 chr5D.!!$F1 5366
5 TraesCS5A01G123600 chr5D 556140240 556142136 1896 True 368.150000 726 85.251750 860 4699 4 chr5D.!!$R1 3839
6 TraesCS5A01G123600 chr4A 613675543 613676105 562 False 555.000000 555 84.575000 4127 4697 1 chr4A.!!$F1 570
7 TraesCS5A01G123600 chr4A 613581323 613583124 1801 True 470.366667 785 84.592333 860 4842 3 chr4A.!!$R2 3982

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
324 329 0.037046 TGCTGTCGATGTCATGTGCT 60.037 50.0 0.00 0.0 0.00 4.40 F
337 342 0.174389 ATGTGCTCGCTGATCGTCTT 59.826 50.0 0.00 0.0 39.67 3.01 F
391 446 0.248458 CAACCGCTGTGTGTTGTTCC 60.248 55.0 11.79 0.0 37.62 3.62 F
1568 1874 0.324943 ACTCCCTCCGTTCCACAATG 59.675 55.0 0.00 0.0 0.00 2.82 F
2477 2793 0.325933 CTTGGACACCAGAGATGGCA 59.674 55.0 0.00 0.0 33.81 4.92 F
2968 3290 0.170561 CGGTTCTGTAGTCGTGGAGG 59.829 60.0 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2001 2314 0.102300 GACGGCTTGTGCAAGGTTTT 59.898 50.000 13.07 0.00 41.91 2.43 R
2107 2420 1.896465 AGGTAGAGTGAGCAGTTGGAC 59.104 52.381 0.00 0.00 0.00 4.02 R
2387 2703 4.377841 CCGAGCAAGATTCAAGAACAGAAC 60.378 45.833 0.00 0.00 0.00 3.01 R
2968 3290 0.743701 CTGCAGGTGAGTGATCTGGC 60.744 60.000 5.57 0.00 32.76 4.85 R
3957 4698 0.188342 ACAGCAAGGGTCCCAAATGT 59.812 50.000 11.55 6.47 0.00 2.71 R
4934 5708 1.227793 GGTAGATGGGAGCTGCTGC 60.228 63.158 13.20 13.20 40.05 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 9.601217 ACAAGTGAATATTTGGTACATACTCTC 57.399 33.333 0.00 0.00 39.30 3.20
46 47 9.529325 TGAATATTTGGTACATACTCTCGAAAG 57.471 33.333 0.00 0.00 39.30 2.62
50 51 8.842358 ATTTGGTACATACTCTCGAAAGAAAA 57.158 30.769 0.00 0.00 37.91 2.29
52 53 8.842358 TTGGTACATACTCTCGAAAGAAAATT 57.158 30.769 0.00 0.00 37.91 1.82
53 54 8.251750 TGGTACATACTCTCGAAAGAAAATTG 57.748 34.615 0.00 0.00 41.32 2.32
54 55 7.148474 TGGTACATACTCTCGAAAGAAAATTGC 60.148 37.037 0.00 0.00 41.32 3.56
55 56 5.858475 ACATACTCTCGAAAGAAAATTGCG 58.142 37.500 0.00 0.00 41.32 4.85
102 103 3.737172 GCAAATGGGTGCTCGCGT 61.737 61.111 5.77 0.00 41.51 6.01
140 145 4.003788 ACCACCGCTCACCTTCCG 62.004 66.667 0.00 0.00 0.00 4.30
143 148 2.678934 ACCGCTCACCTTCCGCTA 60.679 61.111 0.00 0.00 0.00 4.26
220 225 3.695606 GCTCGCTCACCTCCCACA 61.696 66.667 0.00 0.00 0.00 4.17
221 226 2.575993 CTCGCTCACCTCCCACAG 59.424 66.667 0.00 0.00 0.00 3.66
222 227 2.203640 TCGCTCACCTCCCACAGT 60.204 61.111 0.00 0.00 0.00 3.55
276 281 0.893727 GGTCCAGCCGTGGTGAATTT 60.894 55.000 4.90 0.00 45.28 1.82
277 282 0.521735 GTCCAGCCGTGGTGAATTTC 59.478 55.000 4.90 0.00 45.28 2.17
278 283 0.400213 TCCAGCCGTGGTGAATTTCT 59.600 50.000 4.90 0.00 45.28 2.52
292 297 2.080654 ATTTCTCCTCCTCCTCCTCG 57.919 55.000 0.00 0.00 0.00 4.63
304 309 0.319900 CCTCCTCGACAACACACAGG 60.320 60.000 0.00 0.00 0.00 4.00
305 310 0.389391 CTCCTCGACAACACACAGGT 59.611 55.000 0.00 0.00 0.00 4.00
317 322 0.319900 ACACAGGTGCTGTCGATGTC 60.320 55.000 0.00 0.00 43.43 3.06
318 323 0.319813 CACAGGTGCTGTCGATGTCA 60.320 55.000 0.00 0.00 43.43 3.58
320 325 1.004595 CAGGTGCTGTCGATGTCATG 58.995 55.000 0.00 0.00 0.00 3.07
321 326 0.610174 AGGTGCTGTCGATGTCATGT 59.390 50.000 0.00 0.00 0.00 3.21
322 327 0.723414 GGTGCTGTCGATGTCATGTG 59.277 55.000 0.00 0.00 0.00 3.21
323 328 0.095935 GTGCTGTCGATGTCATGTGC 59.904 55.000 0.00 0.00 0.00 4.57
324 329 0.037046 TGCTGTCGATGTCATGTGCT 60.037 50.000 0.00 0.00 0.00 4.40
325 330 0.649475 GCTGTCGATGTCATGTGCTC 59.351 55.000 0.00 0.00 0.00 4.26
326 331 0.919300 CTGTCGATGTCATGTGCTCG 59.081 55.000 0.00 0.00 0.00 5.03
327 332 1.078201 TGTCGATGTCATGTGCTCGC 61.078 55.000 0.00 5.47 0.00 5.03
330 335 0.803380 CGATGTCATGTGCTCGCTGA 60.803 55.000 0.00 0.00 0.00 4.26
331 336 1.579698 GATGTCATGTGCTCGCTGAT 58.420 50.000 0.00 0.00 0.00 2.90
332 337 1.526041 GATGTCATGTGCTCGCTGATC 59.474 52.381 0.00 0.00 0.00 2.92
333 338 0.803380 TGTCATGTGCTCGCTGATCG 60.803 55.000 0.00 0.00 40.15 3.69
334 339 0.803768 GTCATGTGCTCGCTGATCGT 60.804 55.000 0.00 0.00 39.67 3.73
335 340 0.526310 TCATGTGCTCGCTGATCGTC 60.526 55.000 0.00 0.00 39.67 4.20
336 341 0.527169 CATGTGCTCGCTGATCGTCT 60.527 55.000 0.00 0.00 39.67 4.18
337 342 0.174389 ATGTGCTCGCTGATCGTCTT 59.826 50.000 0.00 0.00 39.67 3.01
338 343 0.456824 TGTGCTCGCTGATCGTCTTC 60.457 55.000 0.00 0.00 39.67 2.87
339 344 1.139734 TGCTCGCTGATCGTCTTCC 59.860 57.895 0.00 0.00 39.67 3.46
340 345 1.590259 GCTCGCTGATCGTCTTCCC 60.590 63.158 0.00 0.00 39.67 3.97
341 346 1.298713 CTCGCTGATCGTCTTCCCG 60.299 63.158 0.00 0.00 39.67 5.14
342 347 2.956964 CGCTGATCGTCTTCCCGC 60.957 66.667 0.00 0.00 0.00 6.13
343 348 2.956964 GCTGATCGTCTTCCCGCG 60.957 66.667 0.00 0.00 0.00 6.46
344 349 2.798689 CTGATCGTCTTCCCGCGA 59.201 61.111 8.23 0.00 41.50 5.87
345 350 1.586564 CTGATCGTCTTCCCGCGAC 60.587 63.158 8.23 0.00 40.03 5.19
388 443 2.770589 GGCAACCGCTGTGTGTTGT 61.771 57.895 17.59 0.00 42.91 3.32
389 444 1.138671 GCAACCGCTGTGTGTTGTT 59.861 52.632 17.59 1.15 42.91 2.83
390 445 0.865639 GCAACCGCTGTGTGTTGTTC 60.866 55.000 17.59 5.20 42.91 3.18
391 446 0.248458 CAACCGCTGTGTGTTGTTCC 60.248 55.000 11.79 0.00 37.62 3.62
392 447 1.381165 AACCGCTGTGTGTTGTTCCC 61.381 55.000 0.00 0.00 0.00 3.97
393 448 1.525995 CCGCTGTGTGTTGTTCCCT 60.526 57.895 0.00 0.00 0.00 4.20
394 449 1.648720 CGCTGTGTGTTGTTCCCTG 59.351 57.895 0.00 0.00 0.00 4.45
395 450 1.095228 CGCTGTGTGTTGTTCCCTGT 61.095 55.000 0.00 0.00 0.00 4.00
396 451 1.102978 GCTGTGTGTTGTTCCCTGTT 58.897 50.000 0.00 0.00 0.00 3.16
397 452 1.202290 GCTGTGTGTTGTTCCCTGTTG 60.202 52.381 0.00 0.00 0.00 3.33
398 453 0.814457 TGTGTGTTGTTCCCTGTTGC 59.186 50.000 0.00 0.00 0.00 4.17
399 454 1.102978 GTGTGTTGTTCCCTGTTGCT 58.897 50.000 0.00 0.00 0.00 3.91
400 455 1.102154 TGTGTTGTTCCCTGTTGCTG 58.898 50.000 0.00 0.00 0.00 4.41
411 466 1.853114 CTGTTGCTGCTGAGTGCTGG 61.853 60.000 0.00 0.00 43.37 4.85
417 472 2.176314 CTGCTGAGTGCTGGGCTGTA 62.176 60.000 0.00 0.00 43.37 2.74
454 509 7.227314 TGTTGATGTATGATTCAATCCAGTAGC 59.773 37.037 0.00 0.00 34.60 3.58
456 511 7.455891 TGATGTATGATTCAATCCAGTAGCAT 58.544 34.615 0.00 0.00 0.00 3.79
457 512 7.389607 TGATGTATGATTCAATCCAGTAGCATG 59.610 37.037 0.00 0.00 0.00 4.06
458 513 6.594744 TGTATGATTCAATCCAGTAGCATGT 58.405 36.000 0.00 0.00 0.00 3.21
459 514 7.734942 TGTATGATTCAATCCAGTAGCATGTA 58.265 34.615 0.00 0.00 0.00 2.29
460 515 7.657354 TGTATGATTCAATCCAGTAGCATGTAC 59.343 37.037 0.00 0.00 0.00 2.90
461 516 5.988287 TGATTCAATCCAGTAGCATGTACA 58.012 37.500 0.00 0.00 0.00 2.90
462 517 6.051074 TGATTCAATCCAGTAGCATGTACAG 58.949 40.000 0.33 0.00 0.00 2.74
463 518 5.420725 TTCAATCCAGTAGCATGTACAGT 57.579 39.130 0.33 0.00 0.00 3.55
464 519 6.538945 TTCAATCCAGTAGCATGTACAGTA 57.461 37.500 0.33 0.00 0.00 2.74
465 520 5.902681 TCAATCCAGTAGCATGTACAGTAC 58.097 41.667 0.33 3.49 0.00 2.73
466 521 5.656859 TCAATCCAGTAGCATGTACAGTACT 59.343 40.000 12.07 5.68 0.00 2.73
467 522 5.776173 ATCCAGTAGCATGTACAGTACTC 57.224 43.478 12.07 1.87 0.00 2.59
468 523 3.952323 TCCAGTAGCATGTACAGTACTCC 59.048 47.826 12.07 0.79 0.00 3.85
469 524 3.243101 CCAGTAGCATGTACAGTACTCCG 60.243 52.174 12.07 1.88 0.00 4.63
470 525 2.950309 AGTAGCATGTACAGTACTCCGG 59.050 50.000 12.07 0.00 0.00 5.14
471 526 2.139323 AGCATGTACAGTACTCCGGA 57.861 50.000 12.07 2.93 0.00 5.14
472 527 2.025155 AGCATGTACAGTACTCCGGAG 58.975 52.381 30.11 30.11 0.00 4.63
473 528 1.749634 GCATGTACAGTACTCCGGAGT 59.250 52.381 37.59 37.59 45.02 3.85
474 529 2.947652 GCATGTACAGTACTCCGGAGTA 59.052 50.000 35.34 35.34 42.54 2.59
525 580 8.109705 TGCTGTTGATGAAATAAACATGTACT 57.890 30.769 0.00 0.00 46.31 2.73
824 909 6.183361 TGCCAAATTGGTAGAAAAGGAAACAT 60.183 34.615 14.17 0.00 40.46 2.71
856 945 5.835113 AAAAGCACACACAGAGTTTATGT 57.165 34.783 0.00 0.00 0.00 2.29
1031 1136 4.338379 AAGCATCCTAAGAATACGTCCC 57.662 45.455 0.00 0.00 0.00 4.46
1084 1228 3.761752 CTCTACTCTTATCTAGGCTGGGC 59.238 52.174 0.00 0.00 0.00 5.36
1186 1332 4.527509 TTCCTGCAGTTGTTTTGTTTCA 57.472 36.364 13.81 0.00 0.00 2.69
1368 1672 7.220030 ACAATGACTTATGGCTGGTTAGATAG 58.780 38.462 0.00 0.00 0.00 2.08
1420 1725 5.812642 TGAATTCGGAAAAGCATAGAGAGAC 59.187 40.000 0.04 0.00 0.00 3.36
1548 1854 7.500559 GCATTCTACAGGATTTGGATACTTCTT 59.499 37.037 0.00 0.00 37.61 2.52
1551 1857 8.840200 TCTACAGGATTTGGATACTTCTTACT 57.160 34.615 0.00 0.00 37.61 2.24
1552 1858 8.915036 TCTACAGGATTTGGATACTTCTTACTC 58.085 37.037 0.00 0.00 37.61 2.59
1553 1859 6.890293 ACAGGATTTGGATACTTCTTACTCC 58.110 40.000 0.00 0.00 37.61 3.85
1554 1860 6.126739 ACAGGATTTGGATACTTCTTACTCCC 60.127 42.308 0.00 0.00 37.61 4.30
1555 1861 6.100424 CAGGATTTGGATACTTCTTACTCCCT 59.900 42.308 0.00 0.00 37.61 4.20
1556 1862 6.327887 AGGATTTGGATACTTCTTACTCCCTC 59.672 42.308 0.00 0.00 37.61 4.30
1557 1863 5.952347 TTTGGATACTTCTTACTCCCTCC 57.048 43.478 0.00 0.00 37.61 4.30
1558 1864 3.563223 TGGATACTTCTTACTCCCTCCG 58.437 50.000 0.00 0.00 37.61 4.63
1559 1865 3.053095 TGGATACTTCTTACTCCCTCCGT 60.053 47.826 0.00 0.00 37.61 4.69
1560 1866 3.959449 GGATACTTCTTACTCCCTCCGTT 59.041 47.826 0.00 0.00 0.00 4.44
1561 1867 4.037803 GGATACTTCTTACTCCCTCCGTTC 59.962 50.000 0.00 0.00 0.00 3.95
1562 1868 2.177734 ACTTCTTACTCCCTCCGTTCC 58.822 52.381 0.00 0.00 0.00 3.62
1563 1869 2.176889 CTTCTTACTCCCTCCGTTCCA 58.823 52.381 0.00 0.00 0.00 3.53
1564 1870 1.553706 TCTTACTCCCTCCGTTCCAC 58.446 55.000 0.00 0.00 0.00 4.02
1565 1871 1.203087 TCTTACTCCCTCCGTTCCACA 60.203 52.381 0.00 0.00 0.00 4.17
1566 1872 1.621814 CTTACTCCCTCCGTTCCACAA 59.378 52.381 0.00 0.00 0.00 3.33
1567 1873 1.946984 TACTCCCTCCGTTCCACAAT 58.053 50.000 0.00 0.00 0.00 2.71
1568 1874 0.324943 ACTCCCTCCGTTCCACAATG 59.675 55.000 0.00 0.00 0.00 2.82
1569 1875 0.324943 CTCCCTCCGTTCCACAATGT 59.675 55.000 0.00 0.00 0.00 2.71
1570 1876 1.553248 CTCCCTCCGTTCCACAATGTA 59.447 52.381 0.00 0.00 0.00 2.29
1571 1877 1.553248 TCCCTCCGTTCCACAATGTAG 59.447 52.381 0.00 0.00 0.00 2.74
1572 1878 1.278127 CCCTCCGTTCCACAATGTAGT 59.722 52.381 0.00 0.00 0.00 2.73
1573 1879 2.346803 CCTCCGTTCCACAATGTAGTG 58.653 52.381 0.00 0.00 39.21 2.74
1574 1880 1.732259 CTCCGTTCCACAATGTAGTGC 59.268 52.381 0.00 0.00 38.18 4.40
1575 1881 0.442310 CCGTTCCACAATGTAGTGCG 59.558 55.000 0.00 0.00 38.18 5.34
1576 1882 1.144969 CGTTCCACAATGTAGTGCGT 58.855 50.000 0.00 0.00 38.18 5.24
1577 1883 2.330286 CGTTCCACAATGTAGTGCGTA 58.670 47.619 0.00 0.00 38.18 4.42
1578 1884 2.927477 CGTTCCACAATGTAGTGCGTAT 59.073 45.455 0.00 0.00 38.18 3.06
1579 1885 4.106909 CGTTCCACAATGTAGTGCGTATA 58.893 43.478 0.00 0.00 38.18 1.47
1580 1886 4.743151 CGTTCCACAATGTAGTGCGTATAT 59.257 41.667 0.00 0.00 38.18 0.86
1581 1887 5.916320 CGTTCCACAATGTAGTGCGTATATA 59.084 40.000 0.00 0.00 38.18 0.86
1582 1888 6.584942 CGTTCCACAATGTAGTGCGTATATAT 59.415 38.462 0.00 0.00 38.18 0.86
1583 1889 7.115805 CGTTCCACAATGTAGTGCGTATATATT 59.884 37.037 0.00 0.00 38.18 1.28
1584 1890 8.770828 GTTCCACAATGTAGTGCGTATATATTT 58.229 33.333 0.00 0.00 38.18 1.40
1585 1891 8.896320 TCCACAATGTAGTGCGTATATATTTT 57.104 30.769 0.00 0.00 38.18 1.82
1586 1892 9.332502 TCCACAATGTAGTGCGTATATATTTTT 57.667 29.630 0.00 0.00 38.18 1.94
1587 1893 9.381027 CCACAATGTAGTGCGTATATATTTTTG 57.619 33.333 0.00 0.00 38.18 2.44
1666 1972 9.923143 TCTAGAATACCAAATACATATCGTTGG 57.077 33.333 0.00 0.00 45.02 3.77
1667 1973 9.923143 CTAGAATACCAAATACATATCGTTGGA 57.077 33.333 8.22 0.00 42.66 3.53
1761 2067 7.202016 CTTGGTCAAAGTTTGCTAAGTATGA 57.798 36.000 18.86 0.00 0.00 2.15
1762 2068 6.554334 TGGTCAAAGTTTGCTAAGTATGAC 57.446 37.500 10.90 9.71 36.18 3.06
1763 2069 6.296026 TGGTCAAAGTTTGCTAAGTATGACT 58.704 36.000 10.90 0.00 36.91 3.41
1764 2070 6.770785 TGGTCAAAGTTTGCTAAGTATGACTT 59.229 34.615 10.90 0.00 41.97 3.01
1765 2071 7.284489 TGGTCAAAGTTTGCTAAGTATGACTTT 59.716 33.333 10.90 4.51 39.51 2.66
1766 2072 7.803659 GGTCAAAGTTTGCTAAGTATGACTTTC 59.196 37.037 10.90 0.00 39.51 2.62
1767 2073 8.342634 GTCAAAGTTTGCTAAGTATGACTTTCA 58.657 33.333 10.90 0.00 39.51 2.69
1768 2074 8.898761 TCAAAGTTTGCTAAGTATGACTTTCAA 58.101 29.630 10.90 0.91 39.51 2.69
1769 2075 9.515020 CAAAGTTTGCTAAGTATGACTTTCAAA 57.485 29.630 1.96 11.85 39.51 2.69
1802 2108 1.604604 ACAACATTGTGGAACGGAGG 58.395 50.000 0.00 0.00 42.39 4.30
1803 2109 0.881118 CAACATTGTGGAACGGAGGG 59.119 55.000 0.00 0.00 42.39 4.30
1804 2110 0.768622 AACATTGTGGAACGGAGGGA 59.231 50.000 0.00 0.00 42.39 4.20
1805 2111 0.324943 ACATTGTGGAACGGAGGGAG 59.675 55.000 0.00 0.00 42.39 4.30
1903 2209 6.386654 TCAAATTTCTGAAGGGCGTATTTTC 58.613 36.000 0.00 0.00 0.00 2.29
2001 2314 3.761218 TCAGTGCAACAAAAAGAGGTTGA 59.239 39.130 8.55 0.00 45.50 3.18
2107 2420 4.405116 AGTCCGACTACTAGTACTCCAG 57.595 50.000 0.00 0.00 0.00 3.86
2339 2654 0.595095 CAAGGCCAAGTGAGTTCTGC 59.405 55.000 5.01 0.00 0.00 4.26
2387 2703 8.519799 ACTTTGTGGTTGGTTATATATTCCTG 57.480 34.615 0.00 0.00 0.00 3.86
2477 2793 0.325933 CTTGGACACCAGAGATGGCA 59.674 55.000 0.00 0.00 33.81 4.92
2514 2830 6.720748 TGTCTTGGGAATGAATGAATCTTTGA 59.279 34.615 0.00 0.00 0.00 2.69
2528 2844 3.378911 TCTTTGATTTTTCCAACGGGC 57.621 42.857 0.00 0.00 0.00 6.13
2601 2917 8.514136 TGTTCATTTGTTTTCGGTCATTTATC 57.486 30.769 0.00 0.00 0.00 1.75
2688 3004 9.273016 TCGAGTTTTGAGAAATTTTCACTCTAT 57.727 29.630 17.48 0.00 30.07 1.98
2968 3290 0.170561 CGGTTCTGTAGTCGTGGAGG 59.829 60.000 0.00 0.00 0.00 4.30
3004 3326 2.010043 GCAGGCCATGGCATTCAAAAG 61.010 52.381 36.56 18.58 44.11 2.27
3023 3345 5.458041 AAAGGCGTGAAGTACTAGTGTAA 57.542 39.130 5.39 0.00 0.00 2.41
3162 3484 3.306019 GCACTTAGTTTTGGACCCATTGG 60.306 47.826 0.00 0.00 37.80 3.16
3201 3533 7.361201 GCTCTTGAATTTGCATGAACTAGTGTA 60.361 37.037 0.00 0.00 0.00 2.90
3231 3563 5.816258 GCTGGGAGTAAAAACATACTAGGTC 59.184 44.000 0.00 0.00 36.28 3.85
3237 3569 9.668497 GGAGTAAAAACATACTAGGTCTTTCAT 57.332 33.333 0.00 0.00 36.28 2.57
3363 3989 1.057851 ACGAAGGGTTGGAACTCCCA 61.058 55.000 3.04 0.00 43.23 4.37
3390 4034 1.550524 CCTCCACTCAAGTCCGATTCA 59.449 52.381 0.00 0.00 0.00 2.57
3437 4081 7.895759 AGAAGGAAATTTTCGATTCATTGGAA 58.104 30.769 19.51 0.00 37.45 3.53
3452 4096 2.347490 GAACGCTGGGCAGAGGAA 59.653 61.111 0.00 0.00 32.25 3.36
3488 4132 5.227569 TGTTGAAGCCAGTAGAGAAATCA 57.772 39.130 0.00 0.00 0.00 2.57
3656 4300 7.716998 CCTACTTACCAGACAATGCTCAATATT 59.283 37.037 0.00 0.00 0.00 1.28
3918 4659 4.470334 TTTCTTGCTTCCTTTTTGCTGT 57.530 36.364 0.00 0.00 0.00 4.40
3922 4663 3.883830 TGCTTCCTTTTTGCTGTCAAA 57.116 38.095 0.00 0.00 40.17 2.69
3923 4664 3.784338 TGCTTCCTTTTTGCTGTCAAAG 58.216 40.909 0.00 0.00 42.50 2.77
3924 4665 3.446873 TGCTTCCTTTTTGCTGTCAAAGA 59.553 39.130 0.00 0.00 42.50 2.52
3925 4666 4.081752 TGCTTCCTTTTTGCTGTCAAAGAA 60.082 37.500 0.00 0.00 42.50 2.52
3926 4667 4.505556 GCTTCCTTTTTGCTGTCAAAGAAG 59.494 41.667 13.85 13.85 42.50 2.85
3927 4668 4.654091 TCCTTTTTGCTGTCAAAGAAGG 57.346 40.909 18.41 18.41 43.00 3.46
3928 4669 3.384467 TCCTTTTTGCTGTCAAAGAAGGG 59.616 43.478 20.78 10.98 42.57 3.95
3929 4670 3.384467 CCTTTTTGCTGTCAAAGAAGGGA 59.616 43.478 17.67 0.00 42.50 4.20
3930 4671 4.141959 CCTTTTTGCTGTCAAAGAAGGGAA 60.142 41.667 17.67 0.00 42.50 3.97
3931 4672 4.654091 TTTTGCTGTCAAAGAAGGGAAG 57.346 40.909 0.00 0.00 42.50 3.46
3932 4673 2.276732 TGCTGTCAAAGAAGGGAAGG 57.723 50.000 0.00 0.00 0.00 3.46
3933 4674 1.494721 TGCTGTCAAAGAAGGGAAGGT 59.505 47.619 0.00 0.00 0.00 3.50
3934 4675 2.708861 TGCTGTCAAAGAAGGGAAGGTA 59.291 45.455 0.00 0.00 0.00 3.08
3935 4676 3.137544 TGCTGTCAAAGAAGGGAAGGTAA 59.862 43.478 0.00 0.00 0.00 2.85
3936 4677 3.502595 GCTGTCAAAGAAGGGAAGGTAAC 59.497 47.826 0.00 0.00 0.00 2.50
3937 4678 4.714632 CTGTCAAAGAAGGGAAGGTAACA 58.285 43.478 0.00 0.00 41.41 2.41
3938 4679 5.118729 TGTCAAAGAAGGGAAGGTAACAA 57.881 39.130 0.00 0.00 41.41 2.83
3939 4680 5.511363 TGTCAAAGAAGGGAAGGTAACAAA 58.489 37.500 0.00 0.00 41.41 2.83
3940 4681 5.952947 TGTCAAAGAAGGGAAGGTAACAAAA 59.047 36.000 0.00 0.00 41.41 2.44
3941 4682 6.609616 TGTCAAAGAAGGGAAGGTAACAAAAT 59.390 34.615 0.00 0.00 41.41 1.82
3942 4683 7.125053 TGTCAAAGAAGGGAAGGTAACAAAATT 59.875 33.333 0.00 0.00 41.41 1.82
3943 4684 7.438160 GTCAAAGAAGGGAAGGTAACAAAATTG 59.562 37.037 0.00 0.00 41.41 2.32
3944 4685 5.468540 AGAAGGGAAGGTAACAAAATTGC 57.531 39.130 0.00 0.00 41.41 3.56
3945 4686 5.147767 AGAAGGGAAGGTAACAAAATTGCT 58.852 37.500 0.00 0.00 41.41 3.91
3946 4687 6.311735 AGAAGGGAAGGTAACAAAATTGCTA 58.688 36.000 0.00 0.00 41.41 3.49
3947 4688 6.954102 AGAAGGGAAGGTAACAAAATTGCTAT 59.046 34.615 0.00 0.00 41.41 2.97
3948 4689 7.454694 AGAAGGGAAGGTAACAAAATTGCTATT 59.545 33.333 0.00 0.00 41.41 1.73
3949 4690 6.935167 AGGGAAGGTAACAAAATTGCTATTG 58.065 36.000 0.00 0.00 41.41 1.90
3950 4691 6.496911 AGGGAAGGTAACAAAATTGCTATTGT 59.503 34.615 0.00 0.00 41.31 2.71
3951 4692 6.811665 GGGAAGGTAACAAAATTGCTATTGTC 59.188 38.462 0.00 0.00 38.75 3.18
3952 4693 6.526674 GGAAGGTAACAAAATTGCTATTGTCG 59.473 38.462 0.00 0.00 38.75 4.35
3953 4694 6.811253 AGGTAACAAAATTGCTATTGTCGA 57.189 33.333 0.00 0.00 38.75 4.20
3954 4695 7.209471 AGGTAACAAAATTGCTATTGTCGAA 57.791 32.000 0.00 0.00 38.75 3.71
3955 4696 7.826690 AGGTAACAAAATTGCTATTGTCGAAT 58.173 30.769 0.00 0.00 38.75 3.34
3956 4697 8.952278 AGGTAACAAAATTGCTATTGTCGAATA 58.048 29.630 0.00 0.00 38.75 1.75
3957 4698 9.562583 GGTAACAAAATTGCTATTGTCGAATAA 57.437 29.630 0.00 0.00 38.75 1.40
3960 4701 9.638239 AACAAAATTGCTATTGTCGAATAACAT 57.362 25.926 0.00 0.00 38.75 2.71
3961 4702 9.638239 ACAAAATTGCTATTGTCGAATAACATT 57.362 25.926 0.00 0.00 34.84 2.71
3964 4705 8.633075 AATTGCTATTGTCGAATAACATTTGG 57.367 30.769 0.00 0.00 0.00 3.28
3965 4706 6.130298 TGCTATTGTCGAATAACATTTGGG 57.870 37.500 0.00 0.00 0.00 4.12
3966 4707 5.883115 TGCTATTGTCGAATAACATTTGGGA 59.117 36.000 0.00 0.00 0.00 4.37
3967 4708 6.183360 TGCTATTGTCGAATAACATTTGGGAC 60.183 38.462 0.00 0.00 0.00 4.46
3968 4709 5.576447 ATTGTCGAATAACATTTGGGACC 57.424 39.130 0.00 0.00 0.00 4.46
3969 4710 3.349022 TGTCGAATAACATTTGGGACCC 58.651 45.455 2.45 2.45 0.00 4.46
3970 4711 3.009695 TGTCGAATAACATTTGGGACCCT 59.990 43.478 13.00 0.00 0.00 4.34
3971 4712 4.014406 GTCGAATAACATTTGGGACCCTT 58.986 43.478 13.00 0.00 0.00 3.95
3972 4713 4.013728 TCGAATAACATTTGGGACCCTTG 58.986 43.478 13.00 9.43 0.00 3.61
3973 4714 3.428862 CGAATAACATTTGGGACCCTTGC 60.429 47.826 13.00 0.00 0.00 4.01
3974 4715 2.990740 TAACATTTGGGACCCTTGCT 57.009 45.000 13.00 1.21 0.00 3.91
3975 4716 1.341080 AACATTTGGGACCCTTGCTG 58.659 50.000 13.00 6.73 0.00 4.41
3976 4717 0.188342 ACATTTGGGACCCTTGCTGT 59.812 50.000 13.00 7.37 0.00 4.40
3977 4718 1.427368 ACATTTGGGACCCTTGCTGTA 59.573 47.619 13.00 0.00 0.00 2.74
3978 4719 2.042979 ACATTTGGGACCCTTGCTGTAT 59.957 45.455 13.00 0.00 0.00 2.29
3979 4720 2.990740 TTTGGGACCCTTGCTGTATT 57.009 45.000 13.00 0.00 0.00 1.89
3980 4721 2.990740 TTGGGACCCTTGCTGTATTT 57.009 45.000 13.00 0.00 0.00 1.40
3981 4722 4.390129 TTTGGGACCCTTGCTGTATTTA 57.610 40.909 13.00 0.00 0.00 1.40
3982 4723 4.601406 TTGGGACCCTTGCTGTATTTAT 57.399 40.909 13.00 0.00 0.00 1.40
3983 4724 4.601406 TGGGACCCTTGCTGTATTTATT 57.399 40.909 13.00 0.00 0.00 1.40
3984 4725 4.941713 TGGGACCCTTGCTGTATTTATTT 58.058 39.130 13.00 0.00 0.00 1.40
3985 4726 6.080969 TGGGACCCTTGCTGTATTTATTTA 57.919 37.500 13.00 0.00 0.00 1.40
3986 4727 6.678547 TGGGACCCTTGCTGTATTTATTTAT 58.321 36.000 13.00 0.00 0.00 1.40
3987 4728 7.129425 TGGGACCCTTGCTGTATTTATTTATT 58.871 34.615 13.00 0.00 0.00 1.40
3988 4729 7.621683 TGGGACCCTTGCTGTATTTATTTATTT 59.378 33.333 13.00 0.00 0.00 1.40
3989 4730 8.482943 GGGACCCTTGCTGTATTTATTTATTTT 58.517 33.333 2.09 0.00 0.00 1.82
3990 4731 9.884636 GGACCCTTGCTGTATTTATTTATTTTT 57.115 29.630 0.00 0.00 0.00 1.94
4069 4810 6.271488 AGACCCACAATTTGTCAACATATG 57.729 37.500 0.00 0.00 0.00 1.78
4092 4833 4.635765 GCATACACTTGCTAGTTGAATGGA 59.364 41.667 0.00 0.00 39.57 3.41
4109 4856 3.176552 TGGAGTGCCATTTTGTTGTTG 57.823 42.857 0.00 0.00 39.92 3.33
4110 4857 2.499289 TGGAGTGCCATTTTGTTGTTGT 59.501 40.909 0.00 0.00 39.92 3.32
4111 4858 3.701542 TGGAGTGCCATTTTGTTGTTGTA 59.298 39.130 0.00 0.00 39.92 2.41
4113 4860 4.744631 GGAGTGCCATTTTGTTGTTGTAAG 59.255 41.667 0.00 0.00 0.00 2.34
4114 4861 5.337578 AGTGCCATTTTGTTGTTGTAAGT 57.662 34.783 0.00 0.00 0.00 2.24
4115 4862 5.729510 AGTGCCATTTTGTTGTTGTAAGTT 58.270 33.333 0.00 0.00 0.00 2.66
4116 4863 6.868622 AGTGCCATTTTGTTGTTGTAAGTTA 58.131 32.000 0.00 0.00 0.00 2.24
4117 4864 6.754675 AGTGCCATTTTGTTGTTGTAAGTTAC 59.245 34.615 6.06 6.06 0.00 2.50
4118 4865 6.019398 GTGCCATTTTGTTGTTGTAAGTTACC 60.019 38.462 10.51 0.00 0.00 2.85
4119 4866 6.127310 TGCCATTTTGTTGTTGTAAGTTACCT 60.127 34.615 10.51 0.00 0.00 3.08
4121 4868 7.254286 GCCATTTTGTTGTTGTAAGTTACCTTG 60.254 37.037 10.51 0.00 31.89 3.61
4122 4869 7.762159 CCATTTTGTTGTTGTAAGTTACCTTGT 59.238 33.333 10.51 0.00 31.89 3.16
4123 4870 8.591312 CATTTTGTTGTTGTAAGTTACCTTGTG 58.409 33.333 10.51 0.00 31.89 3.33
4124 4871 5.238006 TGTTGTTGTAAGTTACCTTGTGC 57.762 39.130 10.51 0.00 31.89 4.57
4125 4872 4.944930 TGTTGTTGTAAGTTACCTTGTGCT 59.055 37.500 10.51 0.00 31.89 4.40
4707 5461 1.269936 GCAACTTTGAGTGGCATTGCT 60.270 47.619 8.82 0.00 44.56 3.91
4850 5620 6.906157 ATCATGAACACATCCAGACTTTTT 57.094 33.333 0.00 0.00 0.00 1.94
4851 5621 6.075762 TCATGAACACATCCAGACTTTTTG 57.924 37.500 0.00 0.00 0.00 2.44
4852 5622 5.593909 TCATGAACACATCCAGACTTTTTGT 59.406 36.000 0.00 0.00 0.00 2.83
4853 5623 5.913137 TGAACACATCCAGACTTTTTGTT 57.087 34.783 0.00 0.00 0.00 2.83
4854 5624 6.279513 TGAACACATCCAGACTTTTTGTTT 57.720 33.333 0.00 0.00 0.00 2.83
4855 5625 6.098679 TGAACACATCCAGACTTTTTGTTTG 58.901 36.000 0.00 0.00 0.00 2.93
4856 5626 5.659440 ACACATCCAGACTTTTTGTTTGT 57.341 34.783 0.00 0.00 0.00 2.83
4857 5627 6.036577 ACACATCCAGACTTTTTGTTTGTT 57.963 33.333 0.00 0.00 0.00 2.83
4858 5628 6.463360 ACACATCCAGACTTTTTGTTTGTTT 58.537 32.000 0.00 0.00 0.00 2.83
4859 5629 6.368516 ACACATCCAGACTTTTTGTTTGTTTG 59.631 34.615 0.00 0.00 0.00 2.93
4860 5630 6.368516 CACATCCAGACTTTTTGTTTGTTTGT 59.631 34.615 0.00 0.00 30.03 2.83
4861 5631 6.934083 ACATCCAGACTTTTTGTTTGTTTGTT 59.066 30.769 0.00 0.00 0.00 2.83
4862 5632 7.443879 ACATCCAGACTTTTTGTTTGTTTGTTT 59.556 29.630 0.00 0.00 0.00 2.83
4863 5633 7.183580 TCCAGACTTTTTGTTTGTTTGTTTG 57.816 32.000 0.00 0.00 0.00 2.93
4864 5634 6.763610 TCCAGACTTTTTGTTTGTTTGTTTGT 59.236 30.769 0.00 0.00 0.00 2.83
4865 5635 7.281100 TCCAGACTTTTTGTTTGTTTGTTTGTT 59.719 29.630 0.00 0.00 0.00 2.83
5091 5865 2.047274 CTCACCGCCGACCATTGT 60.047 61.111 0.00 0.00 0.00 2.71
5105 5879 4.742012 GACCATTGTAGAGAGAGGGGATA 58.258 47.826 0.00 0.00 0.00 2.59
5108 5882 4.526262 CCATTGTAGAGAGAGGGGATACAG 59.474 50.000 0.00 0.00 39.74 2.74
5110 5884 2.158445 TGTAGAGAGAGGGGATACAGGC 60.158 54.545 0.00 0.00 39.74 4.85
5111 5885 1.240527 AGAGAGAGGGGATACAGGCT 58.759 55.000 0.00 0.00 39.74 4.58
5112 5886 2.434067 AGAGAGAGGGGATACAGGCTA 58.566 52.381 0.00 0.00 39.74 3.93
5113 5887 2.792370 AGAGAGAGGGGATACAGGCTAA 59.208 50.000 0.00 0.00 39.74 3.09
5115 5889 2.520549 AGAGAGGGGATACAGGCTAAGT 59.479 50.000 0.00 0.00 39.74 2.24
5116 5890 3.727923 AGAGAGGGGATACAGGCTAAGTA 59.272 47.826 0.00 0.00 39.74 2.24
5118 5892 3.467863 AGAGGGGATACAGGCTAAGTACT 59.532 47.826 0.00 0.00 39.74 2.73
5119 5893 3.827876 GAGGGGATACAGGCTAAGTACTC 59.172 52.174 0.00 0.00 39.74 2.59
5120 5894 2.898612 GGGGATACAGGCTAAGTACTCC 59.101 54.545 0.00 0.00 39.74 3.85
5121 5895 2.898612 GGGATACAGGCTAAGTACTCCC 59.101 54.545 0.00 12.45 34.85 4.30
5122 5896 3.438225 GGGATACAGGCTAAGTACTCCCT 60.438 52.174 16.62 0.00 36.91 4.20
5123 5897 3.827876 GGATACAGGCTAAGTACTCCCTC 59.172 52.174 0.00 0.00 0.00 4.30
5125 5899 1.033574 CAGGCTAAGTACTCCCTCCG 58.966 60.000 0.00 0.00 0.00 4.63
5126 5900 0.630134 AGGCTAAGTACTCCCTCCGT 59.370 55.000 0.00 0.00 0.00 4.69
5127 5901 1.006878 AGGCTAAGTACTCCCTCCGTT 59.993 52.381 0.00 0.00 0.00 4.44
5129 5903 1.408340 GCTAAGTACTCCCTCCGTTCC 59.592 57.143 0.00 0.00 0.00 3.62
5131 5905 2.019807 AAGTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
5132 5906 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
5133 5907 2.547990 AGTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
5134 5908 2.910977 AGTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
5135 5909 4.098894 AGTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
5136 5910 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
5137 5911 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
5138 5912 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
5139 5913 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
5140 5914 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
5141 5915 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
5142 5916 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
5143 5917 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
5144 5918 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
5145 5919 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
5146 5920 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
5147 5921 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
5148 5922 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
5149 5923 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
5150 5924 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
5151 5925 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
5152 5926 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
5153 5927 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
5154 5928 1.927895 ACTCGTCGCAGAAATGGATC 58.072 50.000 0.00 0.00 39.69 3.36
5155 5929 1.478510 ACTCGTCGCAGAAATGGATCT 59.521 47.619 0.00 0.00 39.69 2.75
5156 5930 2.688446 ACTCGTCGCAGAAATGGATCTA 59.312 45.455 0.00 0.00 39.69 1.98
5157 5931 3.243234 ACTCGTCGCAGAAATGGATCTAG 60.243 47.826 0.00 0.00 39.69 2.43
5158 5932 2.949644 TCGTCGCAGAAATGGATCTAGA 59.050 45.455 0.00 0.00 39.69 2.43
5159 5933 3.380320 TCGTCGCAGAAATGGATCTAGAA 59.620 43.478 0.00 0.00 39.69 2.10
5160 5934 3.487574 CGTCGCAGAAATGGATCTAGAAC 59.512 47.826 0.00 0.00 39.69 3.01
5161 5935 4.688021 GTCGCAGAAATGGATCTAGAACT 58.312 43.478 0.00 0.00 39.69 3.01
5162 5936 5.505819 CGTCGCAGAAATGGATCTAGAACTA 60.506 44.000 0.00 0.00 39.69 2.24
5163 5937 6.273825 GTCGCAGAAATGGATCTAGAACTAA 58.726 40.000 0.00 0.00 39.69 2.24
5164 5938 6.757010 GTCGCAGAAATGGATCTAGAACTAAA 59.243 38.462 0.00 0.00 39.69 1.85
5165 5939 7.277981 GTCGCAGAAATGGATCTAGAACTAAAA 59.722 37.037 0.00 0.00 39.69 1.52
5166 5940 7.987458 TCGCAGAAATGGATCTAGAACTAAAAT 59.013 33.333 0.00 0.00 0.00 1.82
5167 5941 9.261180 CGCAGAAATGGATCTAGAACTAAAATA 57.739 33.333 0.00 0.00 0.00 1.40
5189 5963 7.825331 ATACATCTAGATACATCCATACCCG 57.175 40.000 4.54 0.00 0.00 5.28
5190 5964 4.402793 ACATCTAGATACATCCATACCCGC 59.597 45.833 4.54 0.00 0.00 6.13
5191 5965 3.014623 TCTAGATACATCCATACCCGCG 58.985 50.000 0.00 0.00 0.00 6.46
5192 5966 1.919240 AGATACATCCATACCCGCGA 58.081 50.000 8.23 0.00 0.00 5.87
5193 5967 1.544691 AGATACATCCATACCCGCGAC 59.455 52.381 8.23 0.00 0.00 5.19
5194 5968 1.271379 GATACATCCATACCCGCGACA 59.729 52.381 8.23 0.00 0.00 4.35
5195 5969 1.112950 TACATCCATACCCGCGACAA 58.887 50.000 8.23 0.00 0.00 3.18
5196 5970 0.179084 ACATCCATACCCGCGACAAG 60.179 55.000 8.23 0.00 0.00 3.16
5197 5971 0.179084 CATCCATACCCGCGACAAGT 60.179 55.000 8.23 1.45 0.00 3.16
5198 5972 1.067974 CATCCATACCCGCGACAAGTA 59.932 52.381 8.23 4.04 0.00 2.24
5199 5973 1.184431 TCCATACCCGCGACAAGTAA 58.816 50.000 8.23 0.00 0.00 2.24
5200 5974 1.758280 TCCATACCCGCGACAAGTAAT 59.242 47.619 8.23 0.00 0.00 1.89
5201 5975 2.168936 TCCATACCCGCGACAAGTAATT 59.831 45.455 8.23 0.00 0.00 1.40
5202 5976 2.542595 CCATACCCGCGACAAGTAATTC 59.457 50.000 8.23 0.00 0.00 2.17
5203 5977 1.912001 TACCCGCGACAAGTAATTCG 58.088 50.000 8.23 0.00 38.31 3.34
5204 5978 0.738412 ACCCGCGACAAGTAATTCGG 60.738 55.000 8.23 0.00 35.73 4.30
5205 5979 0.458889 CCCGCGACAAGTAATTCGGA 60.459 55.000 8.23 0.00 39.23 4.55
5206 5980 1.352114 CCGCGACAAGTAATTCGGAA 58.648 50.000 8.23 0.00 39.23 4.30
5207 5981 1.060122 CCGCGACAAGTAATTCGGAAC 59.940 52.381 8.23 0.00 39.23 3.62
5314 6095 6.782494 CCAATAAGCATTTATAGGGGAAGGTT 59.218 38.462 0.00 0.00 0.00 3.50
5421 6202 0.462047 CTCCGGTCATACAAGCCCAC 60.462 60.000 0.00 0.00 0.00 4.61
5443 6224 1.482182 TGGGTCGTTGGATCTCAGATG 59.518 52.381 0.00 0.00 0.00 2.90
5456 6237 4.286813 TCTCAGATGAAGGGTTAGGGAT 57.713 45.455 0.00 0.00 0.00 3.85
5457 6238 3.969976 TCTCAGATGAAGGGTTAGGGATG 59.030 47.826 0.00 0.00 0.00 3.51
5458 6239 3.048600 TCAGATGAAGGGTTAGGGATGG 58.951 50.000 0.00 0.00 0.00 3.51
5462 6243 1.274416 TGAAGGGTTAGGGATGGAGCT 60.274 52.381 0.00 0.00 0.00 4.09
5467 6248 1.768870 GGTTAGGGATGGAGCTGCTAA 59.231 52.381 6.82 0.00 0.00 3.09
5475 6256 1.238439 TGGAGCTGCTAAACTTGCAC 58.762 50.000 6.82 0.00 36.37 4.57
5484 6265 6.375455 AGCTGCTAAACTTGCACATAATTACT 59.625 34.615 0.00 0.00 36.37 2.24
5494 6275 4.635765 TGCACATAATTACTGGACTCTTGC 59.364 41.667 0.00 0.00 0.00 4.01
5542 6323 2.049627 GATCCAATGGCCGAGCTCCT 62.050 60.000 8.47 0.00 0.00 3.69
5612 6393 5.548406 ACATCTTTACAAAGTAGGCGAACT 58.452 37.500 1.86 0.00 37.31 3.01
5613 6394 5.638234 ACATCTTTACAAAGTAGGCGAACTC 59.362 40.000 1.86 0.00 37.31 3.01
5633 6414 0.535102 CGAGCCAAGTGGTTGAAGGT 60.535 55.000 0.00 0.00 35.46 3.50
5642 6423 5.278463 CCAAGTGGTTGAAGGTTATCAAGTG 60.278 44.000 0.00 0.00 39.84 3.16
5647 6428 6.039382 GTGGTTGAAGGTTATCAAGTGACTTT 59.961 38.462 0.00 0.00 39.84 2.66
5653 6434 9.567776 TGAAGGTTATCAAGTGACTTTTAATCA 57.432 29.630 0.00 0.00 0.00 2.57
5671 6452 7.716799 TTAATCATTTAGGAAATGCACACCT 57.283 32.000 11.85 11.85 46.09 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.778741 ACCAAATATTCACTTGTCGTATATCAT 57.221 29.630 0.00 0.00 0.00 2.45
10 11 8.958119 ATGTACCAAATATTCACTTGTCGTAT 57.042 30.769 0.00 0.00 0.00 3.06
11 12 9.304731 GTATGTACCAAATATTCACTTGTCGTA 57.695 33.333 0.00 0.00 0.00 3.43
12 13 8.038944 AGTATGTACCAAATATTCACTTGTCGT 58.961 33.333 0.00 0.00 0.00 4.34
13 14 8.420374 AGTATGTACCAAATATTCACTTGTCG 57.580 34.615 0.00 0.00 0.00 4.35
14 15 9.601217 AGAGTATGTACCAAATATTCACTTGTC 57.399 33.333 0.00 0.00 0.00 3.18
15 16 9.601217 GAGAGTATGTACCAAATATTCACTTGT 57.399 33.333 0.00 0.00 0.00 3.16
16 17 8.755941 CGAGAGTATGTACCAAATATTCACTTG 58.244 37.037 0.00 0.00 0.00 3.16
17 18 8.692710 TCGAGAGTATGTACCAAATATTCACTT 58.307 33.333 0.00 0.00 0.00 3.16
18 19 8.234136 TCGAGAGTATGTACCAAATATTCACT 57.766 34.615 0.00 0.00 0.00 3.41
19 20 8.867112 TTCGAGAGTATGTACCAAATATTCAC 57.133 34.615 0.00 0.00 0.00 3.18
20 21 9.529325 CTTTCGAGAGTATGTACCAAATATTCA 57.471 33.333 0.00 0.00 0.00 2.57
21 22 9.745880 TCTTTCGAGAGTATGTACCAAATATTC 57.254 33.333 2.53 0.00 0.00 1.75
24 25 9.932207 TTTTCTTTCGAGAGTATGTACCAAATA 57.068 29.630 2.53 0.00 0.00 1.40
41 42 6.339439 CAAAGAGTTTCGCAATTTTCTTTCG 58.661 36.000 0.00 0.00 33.86 3.46
46 47 3.184379 GGGCAAAGAGTTTCGCAATTTTC 59.816 43.478 0.00 0.00 0.00 2.29
50 51 0.603065 GGGGCAAAGAGTTTCGCAAT 59.397 50.000 0.00 0.00 0.00 3.56
52 53 2.258013 CGGGGCAAAGAGTTTCGCA 61.258 57.895 0.00 0.00 0.00 5.10
53 54 1.792118 AACGGGGCAAAGAGTTTCGC 61.792 55.000 0.00 0.00 0.00 4.70
54 55 0.666374 AAACGGGGCAAAGAGTTTCG 59.334 50.000 0.00 0.00 32.05 3.46
55 56 1.269569 CCAAACGGGGCAAAGAGTTTC 60.270 52.381 0.00 0.00 34.97 2.78
82 83 2.676121 CGAGCACCCATTTGCCCA 60.676 61.111 0.00 0.00 44.14 5.36
140 145 2.368011 GGGAGAGTGGTGGGGTAGC 61.368 68.421 0.00 0.00 0.00 3.58
238 243 1.899617 GCAGCTGCTCCTCTTCTCT 59.100 57.895 31.33 0.00 38.21 3.10
265 270 2.622436 GAGGAGGAGAAATTCACCACG 58.378 52.381 11.83 0.00 28.86 4.94
276 281 0.914902 TGTCGAGGAGGAGGAGGAGA 60.915 60.000 0.00 0.00 0.00 3.71
277 282 0.033991 TTGTCGAGGAGGAGGAGGAG 60.034 60.000 0.00 0.00 0.00 3.69
278 283 0.323542 GTTGTCGAGGAGGAGGAGGA 60.324 60.000 0.00 0.00 0.00 3.71
304 309 0.095935 GCACATGACATCGACAGCAC 59.904 55.000 0.00 0.00 0.00 4.40
305 310 0.037046 AGCACATGACATCGACAGCA 60.037 50.000 0.00 0.00 0.00 4.41
317 322 0.527169 AGACGATCAGCGAGCACATG 60.527 55.000 0.00 0.00 44.57 3.21
318 323 0.174389 AAGACGATCAGCGAGCACAT 59.826 50.000 0.00 0.00 44.57 3.21
320 325 1.142778 GGAAGACGATCAGCGAGCAC 61.143 60.000 0.00 0.00 44.57 4.40
321 326 1.139734 GGAAGACGATCAGCGAGCA 59.860 57.895 0.00 0.00 44.57 4.26
322 327 1.590259 GGGAAGACGATCAGCGAGC 60.590 63.158 0.00 0.00 44.57 5.03
323 328 1.298713 CGGGAAGACGATCAGCGAG 60.299 63.158 0.00 0.00 44.57 5.03
324 329 2.798689 CGGGAAGACGATCAGCGA 59.201 61.111 0.00 0.00 44.57 4.93
326 331 2.956964 CGCGGGAAGACGATCAGC 60.957 66.667 0.00 0.00 35.47 4.26
327 332 1.586564 GTCGCGGGAAGACGATCAG 60.587 63.158 6.13 0.00 40.90 2.90
343 348 2.126580 CAGGAACCGACGGACGTC 60.127 66.667 23.38 14.38 40.78 4.34
344 349 4.353437 GCAGGAACCGACGGACGT 62.353 66.667 23.38 12.57 40.78 4.34
345 350 3.966026 GAGCAGGAACCGACGGACG 62.966 68.421 23.38 4.69 42.18 4.79
346 351 2.126031 GAGCAGGAACCGACGGAC 60.126 66.667 23.38 13.74 0.00 4.79
347 352 3.744719 CGAGCAGGAACCGACGGA 61.745 66.667 23.38 0.00 0.00 4.69
350 355 3.991536 GAGGCGAGCAGGAACCGAC 62.992 68.421 0.00 0.00 0.00 4.79
351 356 3.760035 GAGGCGAGCAGGAACCGA 61.760 66.667 0.00 0.00 0.00 4.69
353 358 4.821589 CCGAGGCGAGCAGGAACC 62.822 72.222 0.00 0.00 0.00 3.62
354 359 4.821589 CCCGAGGCGAGCAGGAAC 62.822 72.222 0.00 0.00 0.00 3.62
374 416 1.822186 GGGAACAACACACAGCGGT 60.822 57.895 0.00 0.00 0.00 5.68
388 443 0.535780 CACTCAGCAGCAACAGGGAA 60.536 55.000 0.00 0.00 0.00 3.97
389 444 1.071987 CACTCAGCAGCAACAGGGA 59.928 57.895 0.00 0.00 0.00 4.20
390 445 2.623915 GCACTCAGCAGCAACAGGG 61.624 63.158 0.00 0.00 44.79 4.45
391 446 2.952245 GCACTCAGCAGCAACAGG 59.048 61.111 0.00 0.00 44.79 4.00
400 455 1.449246 CTACAGCCCAGCACTCAGC 60.449 63.158 0.00 0.00 46.19 4.26
411 466 1.884235 ACAGCAAACAGACTACAGCC 58.116 50.000 0.00 0.00 0.00 4.85
417 472 5.308014 TCATACATCAACAGCAAACAGACT 58.692 37.500 0.00 0.00 0.00 3.24
463 518 4.752101 GCTAATTACGAGTACTCCGGAGTA 59.248 45.833 35.34 35.34 42.54 2.59
464 519 3.563390 GCTAATTACGAGTACTCCGGAGT 59.437 47.826 37.59 37.59 45.02 3.85
465 520 3.562973 TGCTAATTACGAGTACTCCGGAG 59.437 47.826 30.11 30.11 0.00 4.63
466 521 3.544684 TGCTAATTACGAGTACTCCGGA 58.455 45.455 17.23 2.93 0.00 5.14
467 522 3.976793 TGCTAATTACGAGTACTCCGG 57.023 47.619 17.23 6.76 0.00 5.14
468 523 4.918037 ACTTGCTAATTACGAGTACTCCG 58.082 43.478 17.23 13.98 29.70 4.63
469 524 7.594386 GGATTACTTGCTAATTACGAGTACTCC 59.406 40.741 17.23 20.72 42.20 3.85
470 525 7.323177 CGGATTACTTGCTAATTACGAGTACTC 59.677 40.741 13.18 13.18 34.46 2.59
471 526 7.137426 CGGATTACTTGCTAATTACGAGTACT 58.863 38.462 0.00 0.00 34.46 2.73
472 527 6.361748 CCGGATTACTTGCTAATTACGAGTAC 59.638 42.308 0.00 0.00 34.46 2.73
473 528 6.039717 ACCGGATTACTTGCTAATTACGAGTA 59.960 38.462 9.46 9.38 33.70 2.59
474 529 5.163478 ACCGGATTACTTGCTAATTACGAGT 60.163 40.000 9.46 10.74 35.84 4.18
475 530 5.287226 ACCGGATTACTTGCTAATTACGAG 58.713 41.667 9.46 0.00 31.90 4.18
476 531 5.266733 ACCGGATTACTTGCTAATTACGA 57.733 39.130 9.46 0.00 31.90 3.43
477 532 6.400727 GCATACCGGATTACTTGCTAATTACG 60.401 42.308 9.46 0.00 0.00 3.18
478 533 6.649557 AGCATACCGGATTACTTGCTAATTAC 59.350 38.462 9.46 0.00 38.57 1.89
479 534 6.649141 CAGCATACCGGATTACTTGCTAATTA 59.351 38.462 9.46 0.00 38.30 1.40
480 535 5.470098 CAGCATACCGGATTACTTGCTAATT 59.530 40.000 9.46 0.00 38.30 1.40
481 536 4.997395 CAGCATACCGGATTACTTGCTAAT 59.003 41.667 9.46 0.00 38.30 1.73
525 580 2.025037 GCCATTGGGGATATATGCAGGA 60.025 50.000 4.53 0.00 40.01 3.86
635 720 7.354257 TCGTTTGCAACAGTTTTATAACTACC 58.646 34.615 0.00 0.00 42.67 3.18
836 921 4.512944 CAGACATAAACTCTGTGTGTGCTT 59.487 41.667 0.00 0.00 34.25 3.91
838 923 3.187227 CCAGACATAAACTCTGTGTGTGC 59.813 47.826 0.00 0.00 36.46 4.57
839 924 4.380531 ACCAGACATAAACTCTGTGTGTG 58.619 43.478 0.00 0.00 36.46 3.82
841 926 4.214119 CCAACCAGACATAAACTCTGTGTG 59.786 45.833 0.00 0.00 37.57 3.82
842 927 4.102524 TCCAACCAGACATAAACTCTGTGT 59.897 41.667 0.00 0.00 34.42 3.72
920 1009 3.322369 TCTACACACCAACATACGCTTG 58.678 45.455 0.00 0.00 0.00 4.01
1009 1109 4.897076 TGGGACGTATTCTTAGGATGCTTA 59.103 41.667 0.00 0.00 0.00 3.09
1031 1136 1.472082 TCACACAACCTTTGCACAGTG 59.528 47.619 0.00 0.00 0.00 3.66
1084 1228 3.713858 TTGCATTCAATCTATTGCCGG 57.286 42.857 0.00 0.00 37.68 6.13
1157 1302 3.947910 ACAACTGCAGGAATCATTTGG 57.052 42.857 19.93 0.00 31.12 3.28
1186 1332 6.994496 TCAATCTCTATCCAAGAATCGCATTT 59.006 34.615 0.00 0.00 32.46 2.32
1420 1725 7.873739 ATTCTAAATTTTCTTGTTTGGAGCG 57.126 32.000 0.00 0.00 0.00 5.03
1525 1831 9.268282 AGTAAGAAGTATCCAAATCCTGTAGAA 57.732 33.333 0.00 0.00 0.00 2.10
1529 1835 6.126739 GGGAGTAAGAAGTATCCAAATCCTGT 60.127 42.308 0.00 0.00 33.24 4.00
1548 1854 1.553248 CATTGTGGAACGGAGGGAGTA 59.447 52.381 0.00 0.00 42.39 2.59
1549 1855 0.324943 CATTGTGGAACGGAGGGAGT 59.675 55.000 0.00 0.00 42.39 3.85
1550 1856 0.324943 ACATTGTGGAACGGAGGGAG 59.675 55.000 0.00 0.00 42.39 4.30
1551 1857 1.553248 CTACATTGTGGAACGGAGGGA 59.447 52.381 0.00 0.00 42.39 4.20
1552 1858 1.278127 ACTACATTGTGGAACGGAGGG 59.722 52.381 7.20 0.00 42.39 4.30
1553 1859 2.346803 CACTACATTGTGGAACGGAGG 58.653 52.381 7.20 0.00 42.39 4.30
1554 1860 1.732259 GCACTACATTGTGGAACGGAG 59.268 52.381 7.20 0.00 42.39 4.63
1555 1861 1.803334 GCACTACATTGTGGAACGGA 58.197 50.000 7.20 0.00 42.39 4.69
1556 1862 0.442310 CGCACTACATTGTGGAACGG 59.558 55.000 7.20 0.00 42.39 4.44
1557 1863 1.144969 ACGCACTACATTGTGGAACG 58.855 50.000 7.20 11.56 42.39 3.95
1558 1864 7.884816 ATATATACGCACTACATTGTGGAAC 57.115 36.000 7.20 0.00 38.31 3.62
1559 1865 8.896320 AAATATATACGCACTACATTGTGGAA 57.104 30.769 7.20 0.00 38.31 3.53
1560 1866 8.896320 AAAATATATACGCACTACATTGTGGA 57.104 30.769 7.20 0.00 38.31 4.02
1561 1867 9.381027 CAAAAATATATACGCACTACATTGTGG 57.619 33.333 0.00 0.00 38.31 4.17
1640 1946 9.923143 CCAACGATATGTATTTGGTATTCTAGA 57.077 33.333 0.00 0.00 34.86 2.43
1641 1947 9.923143 TCCAACGATATGTATTTGGTATTCTAG 57.077 33.333 0.00 0.00 39.69 2.43
1647 1953 9.647797 GATGTATCCAACGATATGTATTTGGTA 57.352 33.333 0.00 0.00 39.69 3.25
1648 1954 8.154203 TGATGTATCCAACGATATGTATTTGGT 58.846 33.333 0.00 0.00 39.69 3.67
1649 1955 8.546597 TGATGTATCCAACGATATGTATTTGG 57.453 34.615 0.00 0.00 40.01 3.28
1650 1956 9.977762 CATGATGTATCCAACGATATGTATTTG 57.022 33.333 0.00 0.00 33.54 2.32
1651 1957 9.942850 TCATGATGTATCCAACGATATGTATTT 57.057 29.630 0.00 0.00 33.54 1.40
1652 1958 9.591792 CTCATGATGTATCCAACGATATGTATT 57.408 33.333 0.00 0.00 33.54 1.89
1653 1959 7.708322 GCTCATGATGTATCCAACGATATGTAT 59.292 37.037 0.00 0.00 33.54 2.29
1654 1960 7.035612 GCTCATGATGTATCCAACGATATGTA 58.964 38.462 0.00 0.00 33.54 2.29
1655 1961 5.871524 GCTCATGATGTATCCAACGATATGT 59.128 40.000 0.00 0.00 33.54 2.29
1656 1962 6.104665 AGCTCATGATGTATCCAACGATATG 58.895 40.000 0.00 0.00 33.54 1.78
1657 1963 6.291648 AGCTCATGATGTATCCAACGATAT 57.708 37.500 0.00 0.00 33.54 1.63
1658 1964 5.728637 AGCTCATGATGTATCCAACGATA 57.271 39.130 0.00 0.00 0.00 2.92
1659 1965 4.613925 AGCTCATGATGTATCCAACGAT 57.386 40.909 0.00 0.00 0.00 3.73
1660 1966 5.728637 ATAGCTCATGATGTATCCAACGA 57.271 39.130 0.00 0.00 0.00 3.85
1661 1967 8.484641 AAATATAGCTCATGATGTATCCAACG 57.515 34.615 0.00 0.00 0.00 4.10
1722 2028 9.628500 ACTTTGACCAAGTTTATAGAGAAAACT 57.372 29.630 0.00 0.00 43.89 2.66
1737 2043 7.041098 AGTCATACTTAGCAAACTTTGACCAAG 60.041 37.037 5.65 7.05 38.64 3.61
1738 2044 6.770785 AGTCATACTTAGCAAACTTTGACCAA 59.229 34.615 5.65 0.00 34.27 3.67
1739 2045 6.296026 AGTCATACTTAGCAAACTTTGACCA 58.704 36.000 5.65 0.00 34.27 4.02
1740 2046 6.803154 AGTCATACTTAGCAAACTTTGACC 57.197 37.500 5.65 0.00 34.27 4.02
1741 2047 8.342634 TGAAAGTCATACTTAGCAAACTTTGAC 58.657 33.333 5.65 0.00 37.47 3.18
1742 2048 8.445275 TGAAAGTCATACTTAGCAAACTTTGA 57.555 30.769 5.65 0.00 37.47 2.69
1743 2049 9.515020 TTTGAAAGTCATACTTAGCAAACTTTG 57.485 29.630 12.73 0.00 37.47 2.77
1783 2089 1.604604 CCTCCGTTCCACAATGTTGT 58.395 50.000 0.00 0.00 43.36 3.32
1784 2090 0.881118 CCCTCCGTTCCACAATGTTG 59.119 55.000 0.00 0.00 0.00 3.33
1785 2091 0.768622 TCCCTCCGTTCCACAATGTT 59.231 50.000 0.00 0.00 0.00 2.71
1786 2092 0.324943 CTCCCTCCGTTCCACAATGT 59.675 55.000 0.00 0.00 0.00 2.71
1787 2093 0.324943 ACTCCCTCCGTTCCACAATG 59.675 55.000 0.00 0.00 0.00 2.82
1788 2094 1.553704 GTACTCCCTCCGTTCCACAAT 59.446 52.381 0.00 0.00 0.00 2.71
1789 2095 0.971386 GTACTCCCTCCGTTCCACAA 59.029 55.000 0.00 0.00 0.00 3.33
1790 2096 0.113776 AGTACTCCCTCCGTTCCACA 59.886 55.000 0.00 0.00 0.00 4.17
1791 2097 2.134789 TAGTACTCCCTCCGTTCCAC 57.865 55.000 0.00 0.00 0.00 4.02
1792 2098 3.393426 AATAGTACTCCCTCCGTTCCA 57.607 47.619 0.00 0.00 0.00 3.53
1793 2099 6.416631 AATAAATAGTACTCCCTCCGTTCC 57.583 41.667 0.00 0.00 0.00 3.62
1794 2100 7.652507 CAGAAATAAATAGTACTCCCTCCGTTC 59.347 40.741 0.00 0.00 0.00 3.95
1795 2101 7.498443 CAGAAATAAATAGTACTCCCTCCGTT 58.502 38.462 0.00 0.00 0.00 4.44
1796 2102 6.462628 GCAGAAATAAATAGTACTCCCTCCGT 60.463 42.308 0.00 0.00 0.00 4.69
1797 2103 5.927115 GCAGAAATAAATAGTACTCCCTCCG 59.073 44.000 0.00 0.00 0.00 4.63
1798 2104 6.706716 GTGCAGAAATAAATAGTACTCCCTCC 59.293 42.308 0.00 0.00 0.00 4.30
1799 2105 6.706716 GGTGCAGAAATAAATAGTACTCCCTC 59.293 42.308 0.00 0.00 0.00 4.30
1800 2106 6.387220 AGGTGCAGAAATAAATAGTACTCCCT 59.613 38.462 0.00 0.00 0.00 4.20
1801 2107 6.592870 AGGTGCAGAAATAAATAGTACTCCC 58.407 40.000 0.00 0.00 0.00 4.30
1802 2108 7.656542 GGTAGGTGCAGAAATAAATAGTACTCC 59.343 40.741 0.00 0.00 0.00 3.85
1803 2109 8.422566 AGGTAGGTGCAGAAATAAATAGTACTC 58.577 37.037 0.00 0.00 0.00 2.59
1804 2110 8.204836 CAGGTAGGTGCAGAAATAAATAGTACT 58.795 37.037 0.00 0.00 0.00 2.73
1805 2111 7.985752 ACAGGTAGGTGCAGAAATAAATAGTAC 59.014 37.037 0.00 0.00 0.00 2.73
1971 2284 7.095271 CCTCTTTTTGTTGCACTGAAAAAGAAA 60.095 33.333 25.10 13.87 46.89 2.52
1982 2295 5.617609 GTTTTCAACCTCTTTTTGTTGCAC 58.382 37.500 0.00 0.00 41.21 4.57
2001 2314 0.102300 GACGGCTTGTGCAAGGTTTT 59.898 50.000 13.07 0.00 41.91 2.43
2058 2371 6.607019 ACTAGTACTAAATGGAGGAGAGGAG 58.393 44.000 3.76 0.00 0.00 3.69
2107 2420 1.896465 AGGTAGAGTGAGCAGTTGGAC 59.104 52.381 0.00 0.00 0.00 4.02
2339 2654 5.892160 TTTTGCATGATGAAGAGGAAGAG 57.108 39.130 0.00 0.00 0.00 2.85
2387 2703 4.377841 CCGAGCAAGATTCAAGAACAGAAC 60.378 45.833 0.00 0.00 0.00 3.01
2477 2793 4.993705 TCCCAAGACAGAATAACCACTT 57.006 40.909 0.00 0.00 0.00 3.16
2514 2830 1.618343 CAGGAAGCCCGTTGGAAAAAT 59.382 47.619 0.00 0.00 37.58 1.82
2575 2891 9.139174 GATAAATGACCGAAAACAAATGAACAT 57.861 29.630 0.00 0.00 0.00 2.71
2601 2917 5.454554 CGATGATAAAAGCATCAGCAAACAG 59.545 40.000 6.04 0.00 40.55 3.16
2643 2959 4.023980 TCGACTCTCCAATATCCACAAGT 58.976 43.478 0.00 0.00 0.00 3.16
2688 3004 4.527816 ACCAAATCAGCTTGAAATAAGGCA 59.472 37.500 0.00 0.00 0.00 4.75
2745 3061 2.286536 GCTCGCTCCGTAAACAAAACAA 60.287 45.455 0.00 0.00 0.00 2.83
2747 3063 1.529865 AGCTCGCTCCGTAAACAAAAC 59.470 47.619 0.00 0.00 0.00 2.43
2818 3134 8.726988 GCAACTGAACTGTAGGATTTAAACATA 58.273 33.333 0.00 0.00 0.00 2.29
2881 3203 9.734620 CTTCTCACAATCATTCAACTAACAAAA 57.265 29.630 0.00 0.00 0.00 2.44
2882 3204 7.862372 GCTTCTCACAATCATTCAACTAACAAA 59.138 33.333 0.00 0.00 0.00 2.83
2883 3205 7.013178 TGCTTCTCACAATCATTCAACTAACAA 59.987 33.333 0.00 0.00 0.00 2.83
2884 3206 6.486320 TGCTTCTCACAATCATTCAACTAACA 59.514 34.615 0.00 0.00 0.00 2.41
2885 3207 6.902341 TGCTTCTCACAATCATTCAACTAAC 58.098 36.000 0.00 0.00 0.00 2.34
2886 3208 6.936335 TCTGCTTCTCACAATCATTCAACTAA 59.064 34.615 0.00 0.00 0.00 2.24
2968 3290 0.743701 CTGCAGGTGAGTGATCTGGC 60.744 60.000 5.57 0.00 32.76 4.85
3004 3326 4.990257 TCATTACACTAGTACTTCACGCC 58.010 43.478 0.00 0.00 0.00 5.68
3023 3345 2.996621 GAGCTCAAGCACGTAACTTCAT 59.003 45.455 9.40 0.00 45.16 2.57
3201 3533 7.962441 AGTATGTTTTTACTCCCAGCAAATTT 58.038 30.769 0.00 0.00 0.00 1.82
3231 3563 8.961294 AGAAAGACTATCCAGATTGATGAAAG 57.039 34.615 0.00 0.00 0.00 2.62
3237 3569 8.094548 TCGAAAAAGAAAGACTATCCAGATTGA 58.905 33.333 0.00 0.00 0.00 2.57
3298 3630 4.220382 TGCACAAGAGTAATGGGAAAATGG 59.780 41.667 0.00 0.00 0.00 3.16
3363 3989 2.587522 GACTTGAGTGGAGGCCTTTTT 58.412 47.619 6.77 0.00 0.00 1.94
3390 4034 1.603455 CAGGTGGGAATGGTTGCGT 60.603 57.895 0.00 0.00 0.00 5.24
3437 4081 1.600916 GTTTTCCTCTGCCCAGCGT 60.601 57.895 0.00 0.00 0.00 5.07
3452 4096 3.490348 CTTCAACAGGACCAGGATGTTT 58.510 45.455 0.00 0.00 35.04 2.83
3488 4132 3.083349 TAGTCCTGCGGCTGCCAT 61.083 61.111 20.29 0.00 41.78 4.40
3509 4153 0.978146 CATCCGAGGAAGGGTCTGGT 60.978 60.000 0.00 0.00 0.00 4.00
3656 4300 3.822192 CCGACACCGCCATCGAGA 61.822 66.667 0.00 0.00 40.86 4.04
3918 4659 7.496747 CAATTTTGTTACCTTCCCTTCTTTGA 58.503 34.615 0.00 0.00 0.00 2.69
3922 4663 5.147767 AGCAATTTTGTTACCTTCCCTTCT 58.852 37.500 0.00 0.00 0.00 2.85
3923 4664 5.468540 AGCAATTTTGTTACCTTCCCTTC 57.531 39.130 0.00 0.00 0.00 3.46
3924 4665 7.016170 ACAATAGCAATTTTGTTACCTTCCCTT 59.984 33.333 0.00 0.00 32.28 3.95
3925 4666 6.496911 ACAATAGCAATTTTGTTACCTTCCCT 59.503 34.615 0.00 0.00 32.28 4.20
3926 4667 6.697395 ACAATAGCAATTTTGTTACCTTCCC 58.303 36.000 0.00 0.00 32.28 3.97
3927 4668 6.526674 CGACAATAGCAATTTTGTTACCTTCC 59.473 38.462 0.00 0.00 36.25 3.46
3928 4669 7.302524 TCGACAATAGCAATTTTGTTACCTTC 58.697 34.615 0.00 0.00 36.25 3.46
3929 4670 7.209471 TCGACAATAGCAATTTTGTTACCTT 57.791 32.000 0.00 0.00 36.25 3.50
3930 4671 6.811253 TCGACAATAGCAATTTTGTTACCT 57.189 33.333 0.00 0.00 36.25 3.08
3931 4672 9.562583 TTATTCGACAATAGCAATTTTGTTACC 57.437 29.630 0.00 0.00 36.25 2.85
3934 4675 9.638239 ATGTTATTCGACAATAGCAATTTTGTT 57.362 25.926 0.00 0.00 38.67 2.83
3935 4676 9.638239 AATGTTATTCGACAATAGCAATTTTGT 57.362 25.926 0.00 0.00 38.67 2.83
3938 4679 9.086336 CCAAATGTTATTCGACAATAGCAATTT 57.914 29.630 0.00 0.00 38.67 1.82
3939 4680 7.706179 CCCAAATGTTATTCGACAATAGCAATT 59.294 33.333 0.00 0.00 38.67 2.32
3940 4681 7.068103 TCCCAAATGTTATTCGACAATAGCAAT 59.932 33.333 0.00 0.00 38.67 3.56
3941 4682 6.375736 TCCCAAATGTTATTCGACAATAGCAA 59.624 34.615 0.00 0.00 38.67 3.91
3942 4683 5.883115 TCCCAAATGTTATTCGACAATAGCA 59.117 36.000 0.00 0.00 39.29 3.49
3943 4684 6.199393 GTCCCAAATGTTATTCGACAATAGC 58.801 40.000 0.00 0.00 32.47 2.97
3944 4685 6.238648 GGGTCCCAAATGTTATTCGACAATAG 60.239 42.308 1.78 0.00 32.47 1.73
3945 4686 5.591067 GGGTCCCAAATGTTATTCGACAATA 59.409 40.000 1.78 0.00 32.47 1.90
3946 4687 4.401202 GGGTCCCAAATGTTATTCGACAAT 59.599 41.667 1.78 0.00 32.47 2.71
3947 4688 3.759618 GGGTCCCAAATGTTATTCGACAA 59.240 43.478 1.78 0.00 32.47 3.18
3948 4689 3.009695 AGGGTCCCAAATGTTATTCGACA 59.990 43.478 11.55 0.00 0.00 4.35
3949 4690 3.617284 AGGGTCCCAAATGTTATTCGAC 58.383 45.455 11.55 0.00 0.00 4.20
3950 4691 4.013728 CAAGGGTCCCAAATGTTATTCGA 58.986 43.478 11.55 0.00 0.00 3.71
3951 4692 3.428862 GCAAGGGTCCCAAATGTTATTCG 60.429 47.826 11.55 0.00 0.00 3.34
3952 4693 3.769300 AGCAAGGGTCCCAAATGTTATTC 59.231 43.478 11.55 0.00 0.00 1.75
3953 4694 3.515104 CAGCAAGGGTCCCAAATGTTATT 59.485 43.478 11.55 0.00 0.00 1.40
3954 4695 3.099141 CAGCAAGGGTCCCAAATGTTAT 58.901 45.455 11.55 0.00 0.00 1.89
3955 4696 2.158385 ACAGCAAGGGTCCCAAATGTTA 60.158 45.455 11.55 0.00 0.00 2.41
3956 4697 1.341080 CAGCAAGGGTCCCAAATGTT 58.659 50.000 11.55 1.14 0.00 2.71
3957 4698 0.188342 ACAGCAAGGGTCCCAAATGT 59.812 50.000 11.55 6.47 0.00 2.71
3958 4699 2.214376 TACAGCAAGGGTCCCAAATG 57.786 50.000 11.55 7.34 0.00 2.32
3959 4700 3.473113 AATACAGCAAGGGTCCCAAAT 57.527 42.857 11.55 0.00 0.00 2.32
3960 4701 2.990740 AATACAGCAAGGGTCCCAAA 57.009 45.000 11.55 0.00 0.00 3.28
3961 4702 2.990740 AAATACAGCAAGGGTCCCAA 57.009 45.000 11.55 0.00 0.00 4.12
3962 4703 4.601406 AATAAATACAGCAAGGGTCCCA 57.399 40.909 11.55 0.00 0.00 4.37
3963 4704 7.597288 AATAAATAAATACAGCAAGGGTCCC 57.403 36.000 0.00 0.00 0.00 4.46
3964 4705 9.884636 AAAAATAAATAAATACAGCAAGGGTCC 57.115 29.630 0.00 0.00 0.00 4.46
3993 4734 9.054922 CCTTGTGATTAATTTTGTGAACCAATT 57.945 29.630 0.00 0.00 31.81 2.32
3994 4735 8.428063 TCCTTGTGATTAATTTTGTGAACCAAT 58.572 29.630 0.00 0.00 31.81 3.16
3995 4736 7.786030 TCCTTGTGATTAATTTTGTGAACCAA 58.214 30.769 0.00 0.00 0.00 3.67
3996 4737 7.353414 TCCTTGTGATTAATTTTGTGAACCA 57.647 32.000 0.00 0.00 0.00 3.67
3997 4738 8.831715 AATCCTTGTGATTAATTTTGTGAACC 57.168 30.769 0.00 0.00 41.96 3.62
4013 4754 5.820423 TCGGGACATAATTGTAATCCTTGTG 59.180 40.000 5.11 0.00 35.79 3.33
4069 4810 4.635765 TCCATTCAACTAGCAAGTGTATGC 59.364 41.667 0.00 0.00 46.78 3.14
4092 4833 5.337578 ACTTACAACAACAAAATGGCACT 57.662 34.783 0.00 0.00 0.00 4.40
4113 4860 4.691216 CCTACAAGAAGAGCACAAGGTAAC 59.309 45.833 0.00 0.00 0.00 2.50
4114 4861 4.591498 TCCTACAAGAAGAGCACAAGGTAA 59.409 41.667 0.00 0.00 0.00 2.85
4115 4862 4.157246 TCCTACAAGAAGAGCACAAGGTA 58.843 43.478 0.00 0.00 0.00 3.08
4116 4863 2.972713 TCCTACAAGAAGAGCACAAGGT 59.027 45.455 0.00 0.00 0.00 3.50
4117 4864 3.685139 TCCTACAAGAAGAGCACAAGG 57.315 47.619 0.00 0.00 0.00 3.61
4118 4865 4.187694 GGATCCTACAAGAAGAGCACAAG 58.812 47.826 3.84 0.00 0.00 3.16
4119 4866 3.582647 TGGATCCTACAAGAAGAGCACAA 59.417 43.478 14.23 0.00 0.00 3.33
4121 4868 3.895232 TGGATCCTACAAGAAGAGCAC 57.105 47.619 14.23 0.00 0.00 4.40
4122 4869 4.908601 TTTGGATCCTACAAGAAGAGCA 57.091 40.909 14.23 0.00 0.00 4.26
4123 4870 5.106118 GGTTTTTGGATCCTACAAGAAGAGC 60.106 44.000 14.23 0.00 0.00 4.09
4124 4871 5.122396 CGGTTTTTGGATCCTACAAGAAGAG 59.878 44.000 14.23 0.00 0.00 2.85
4125 4872 5.001232 CGGTTTTTGGATCCTACAAGAAGA 58.999 41.667 14.23 0.00 0.00 2.87
4534 5288 3.971702 AGCCCAGTGAGGTTGGCC 61.972 66.667 0.00 0.00 45.14 5.36
4850 5620 7.807907 ACAAACAAACAAACAAACAAACAAACA 59.192 25.926 0.00 0.00 0.00 2.83
4851 5621 8.162906 ACAAACAAACAAACAAACAAACAAAC 57.837 26.923 0.00 0.00 0.00 2.93
4852 5622 8.742554 AACAAACAAACAAACAAACAAACAAA 57.257 23.077 0.00 0.00 0.00 2.83
4853 5623 8.742554 AAACAAACAAACAAACAAACAAACAA 57.257 23.077 0.00 0.00 0.00 2.83
4854 5624 8.020819 TGAAACAAACAAACAAACAAACAAACA 58.979 25.926 0.00 0.00 0.00 2.83
4855 5625 8.382003 TGAAACAAACAAACAAACAAACAAAC 57.618 26.923 0.00 0.00 0.00 2.93
4856 5626 8.237267 ACTGAAACAAACAAACAAACAAACAAA 58.763 25.926 0.00 0.00 0.00 2.83
4857 5627 7.752695 ACTGAAACAAACAAACAAACAAACAA 58.247 26.923 0.00 0.00 0.00 2.83
4858 5628 7.308782 ACTGAAACAAACAAACAAACAAACA 57.691 28.000 0.00 0.00 0.00 2.83
4859 5629 7.694367 ACAACTGAAACAAACAAACAAACAAAC 59.306 29.630 0.00 0.00 0.00 2.93
4860 5630 7.752695 ACAACTGAAACAAACAAACAAACAAA 58.247 26.923 0.00 0.00 0.00 2.83
4861 5631 7.308782 ACAACTGAAACAAACAAACAAACAA 57.691 28.000 0.00 0.00 0.00 2.83
4862 5632 6.018669 GGACAACTGAAACAAACAAACAAACA 60.019 34.615 0.00 0.00 0.00 2.83
4863 5633 6.018669 TGGACAACTGAAACAAACAAACAAAC 60.019 34.615 0.00 0.00 0.00 2.93
4864 5634 6.049149 TGGACAACTGAAACAAACAAACAAA 58.951 32.000 0.00 0.00 0.00 2.83
4865 5635 5.601662 TGGACAACTGAAACAAACAAACAA 58.398 33.333 0.00 0.00 0.00 2.83
4917 5691 2.801679 GCTGCAGATGCTCTTAGATGAC 59.198 50.000 20.43 0.00 42.66 3.06
4918 5692 2.433239 TGCTGCAGATGCTCTTAGATGA 59.567 45.455 20.43 0.00 42.66 2.92
4934 5708 1.227793 GGTAGATGGGAGCTGCTGC 60.228 63.158 13.20 13.20 40.05 5.25
4999 5773 3.118811 CCCGCCAATGTCAATTTGGTTAT 60.119 43.478 6.99 0.00 44.52 1.89
5091 5865 2.434067 AGCCTGTATCCCCTCTCTCTA 58.566 52.381 0.00 0.00 0.00 2.43
5105 5879 1.685491 CGGAGGGAGTACTTAGCCTGT 60.685 57.143 0.00 0.00 0.00 4.00
5108 5882 1.408340 GAACGGAGGGAGTACTTAGCC 59.592 57.143 0.00 0.00 0.00 3.93
5110 5884 2.731572 TGGAACGGAGGGAGTACTTAG 58.268 52.381 0.00 0.00 0.00 2.18
5111 5885 2.905415 TGGAACGGAGGGAGTACTTA 57.095 50.000 0.00 0.00 0.00 2.24
5112 5886 2.019807 TTGGAACGGAGGGAGTACTT 57.980 50.000 0.00 0.00 0.00 2.24
5113 5887 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
5115 5889 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
5116 5890 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
5118 5892 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
5119 5893 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
5120 5894 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
5121 5895 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
5122 5896 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
5123 5897 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
5125 5899 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
5126 5900 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
5127 5901 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
5129 5903 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
5131 5905 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
5132 5906 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
5133 5907 3.130516 AGATCCATTTCTGCGACGAGTAA 59.869 43.478 0.00 0.00 0.00 2.24
5134 5908 2.688446 AGATCCATTTCTGCGACGAGTA 59.312 45.455 0.00 0.00 0.00 2.59
5135 5909 1.478510 AGATCCATTTCTGCGACGAGT 59.521 47.619 0.00 0.00 0.00 4.18
5136 5910 2.215907 AGATCCATTTCTGCGACGAG 57.784 50.000 0.00 0.00 0.00 4.18
5137 5911 2.949644 TCTAGATCCATTTCTGCGACGA 59.050 45.455 0.00 0.00 0.00 4.20
5138 5912 3.355626 TCTAGATCCATTTCTGCGACG 57.644 47.619 0.00 0.00 0.00 5.12
5139 5913 4.688021 AGTTCTAGATCCATTTCTGCGAC 58.312 43.478 0.00 0.00 0.00 5.19
5140 5914 6.465439 TTAGTTCTAGATCCATTTCTGCGA 57.535 37.500 0.00 0.00 0.00 5.10
5141 5915 7.539712 TTTTAGTTCTAGATCCATTTCTGCG 57.460 36.000 0.00 0.00 0.00 5.18
5163 5937 8.696374 CGGGTATGGATGTATCTAGATGTATTT 58.304 37.037 15.79 0.00 0.00 1.40
5164 5938 7.201920 GCGGGTATGGATGTATCTAGATGTATT 60.202 40.741 15.79 0.00 0.00 1.89
5165 5939 6.265649 GCGGGTATGGATGTATCTAGATGTAT 59.734 42.308 15.79 9.11 0.00 2.29
5166 5940 5.593095 GCGGGTATGGATGTATCTAGATGTA 59.407 44.000 15.79 4.44 0.00 2.29
5167 5941 4.402793 GCGGGTATGGATGTATCTAGATGT 59.597 45.833 15.79 1.25 0.00 3.06
5168 5942 4.498177 CGCGGGTATGGATGTATCTAGATG 60.498 50.000 15.79 0.00 0.00 2.90
5169 5943 3.632604 CGCGGGTATGGATGTATCTAGAT 59.367 47.826 10.73 10.73 0.00 1.98
5170 5944 3.014623 CGCGGGTATGGATGTATCTAGA 58.985 50.000 0.00 0.00 0.00 2.43
5171 5945 3.014623 TCGCGGGTATGGATGTATCTAG 58.985 50.000 6.13 0.00 0.00 2.43
5172 5946 2.751259 GTCGCGGGTATGGATGTATCTA 59.249 50.000 6.13 0.00 0.00 1.98
5173 5947 1.544691 GTCGCGGGTATGGATGTATCT 59.455 52.381 6.13 0.00 0.00 1.98
5174 5948 1.271379 TGTCGCGGGTATGGATGTATC 59.729 52.381 6.13 0.00 0.00 2.24
5175 5949 1.334160 TGTCGCGGGTATGGATGTAT 58.666 50.000 6.13 0.00 0.00 2.29
5176 5950 1.067974 CTTGTCGCGGGTATGGATGTA 59.932 52.381 6.13 0.00 0.00 2.29
5177 5951 0.179084 CTTGTCGCGGGTATGGATGT 60.179 55.000 6.13 0.00 0.00 3.06
5178 5952 0.179084 ACTTGTCGCGGGTATGGATG 60.179 55.000 6.13 0.00 0.00 3.51
5179 5953 1.405872 TACTTGTCGCGGGTATGGAT 58.594 50.000 6.13 0.00 0.00 3.41
5180 5954 1.184431 TTACTTGTCGCGGGTATGGA 58.816 50.000 6.13 0.00 0.00 3.41
5181 5955 2.234300 ATTACTTGTCGCGGGTATGG 57.766 50.000 6.13 0.00 0.00 2.74
5182 5956 2.217847 CGAATTACTTGTCGCGGGTATG 59.782 50.000 6.13 0.00 0.00 2.39
5183 5957 2.466846 CGAATTACTTGTCGCGGGTAT 58.533 47.619 6.13 0.00 0.00 2.73
5184 5958 1.469595 CCGAATTACTTGTCGCGGGTA 60.470 52.381 6.13 2.12 35.93 3.69
5185 5959 0.738412 CCGAATTACTTGTCGCGGGT 60.738 55.000 6.13 3.16 35.93 5.28
5186 5960 0.458889 TCCGAATTACTTGTCGCGGG 60.459 55.000 6.13 0.00 39.24 6.13
5187 5961 1.060122 GTTCCGAATTACTTGTCGCGG 59.940 52.381 6.13 0.00 40.06 6.46
5188 5962 1.266211 CGTTCCGAATTACTTGTCGCG 60.266 52.381 0.00 0.00 35.93 5.87
5189 5963 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
5190 5964 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
5191 5965 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
5192 5966 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
5193 5967 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
5194 5968 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
5195 5969 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
5196 5970 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
5197 5971 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
5198 5972 1.856629 TACTCCCTCCGTTCCGAATT 58.143 50.000 0.00 0.00 0.00 2.17
5199 5973 2.083628 ATACTCCCTCCGTTCCGAAT 57.916 50.000 0.00 0.00 0.00 3.34
5200 5974 2.734755 TATACTCCCTCCGTTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
5201 5975 2.158564 ACATATACTCCCTCCGTTCCGA 60.159 50.000 0.00 0.00 0.00 4.55
5202 5976 2.030185 CACATATACTCCCTCCGTTCCG 60.030 54.545 0.00 0.00 0.00 4.30
5203 5977 3.228453 TCACATATACTCCCTCCGTTCC 58.772 50.000 0.00 0.00 0.00 3.62
5204 5978 4.341520 ACTTCACATATACTCCCTCCGTTC 59.658 45.833 0.00 0.00 0.00 3.95
5205 5979 4.287552 ACTTCACATATACTCCCTCCGTT 58.712 43.478 0.00 0.00 0.00 4.44
5206 5980 3.912248 ACTTCACATATACTCCCTCCGT 58.088 45.455 0.00 0.00 0.00 4.69
5207 5981 4.099573 ACAACTTCACATATACTCCCTCCG 59.900 45.833 0.00 0.00 0.00 4.63
5208 5982 5.615925 ACAACTTCACATATACTCCCTCC 57.384 43.478 0.00 0.00 0.00 4.30
5209 5983 7.657761 CCAATACAACTTCACATATACTCCCTC 59.342 40.741 0.00 0.00 0.00 4.30
5210 5984 7.420214 CCCAATACAACTTCACATATACTCCCT 60.420 40.741 0.00 0.00 0.00 4.20
5211 5985 6.710744 CCCAATACAACTTCACATATACTCCC 59.289 42.308 0.00 0.00 0.00 4.30
5212 5986 6.710744 CCCCAATACAACTTCACATATACTCC 59.289 42.308 0.00 0.00 0.00 3.85
5213 5987 7.506114 TCCCCAATACAACTTCACATATACTC 58.494 38.462 0.00 0.00 0.00 2.59
5214 5988 7.446106 TCCCCAATACAACTTCACATATACT 57.554 36.000 0.00 0.00 0.00 2.12
5281 6062 1.972872 AATGCTTATTGGGGCTCTCG 58.027 50.000 0.00 0.00 0.00 4.04
5314 6095 2.665165 TCTCCAGCAGCTTTCCAAAAA 58.335 42.857 0.00 0.00 0.00 1.94
5393 6174 1.043116 TATGACCGGAGCACAGGAGG 61.043 60.000 9.46 0.00 35.41 4.30
5443 6224 1.141858 CAGCTCCATCCCTAACCCTTC 59.858 57.143 0.00 0.00 0.00 3.46
5456 6237 1.238439 GTGCAAGTTTAGCAGCTCCA 58.762 50.000 0.00 0.00 43.63 3.86
5457 6238 1.238439 TGTGCAAGTTTAGCAGCTCC 58.762 50.000 0.00 0.00 43.63 4.70
5458 6239 4.685169 TTATGTGCAAGTTTAGCAGCTC 57.315 40.909 0.00 0.00 43.63 4.09
5462 6243 6.657117 TCCAGTAATTATGTGCAAGTTTAGCA 59.343 34.615 0.00 0.00 40.19 3.49
5467 6248 6.476378 AGAGTCCAGTAATTATGTGCAAGTT 58.524 36.000 0.00 0.00 0.00 2.66
5475 6256 4.693283 TCCGCAAGAGTCCAGTAATTATG 58.307 43.478 0.00 0.00 43.02 1.90
5515 6296 0.602372 GGCCATTGGATCGAGCTCTC 60.602 60.000 12.85 3.05 0.00 3.20
5542 6323 2.503765 TGAAATATCAGGTGCTCCCGAA 59.496 45.455 0.00 0.00 38.74 4.30
5612 6393 0.250295 CTTCAACCACTTGGCTCGGA 60.250 55.000 0.00 0.00 39.32 4.55
5613 6394 1.237285 CCTTCAACCACTTGGCTCGG 61.237 60.000 0.00 0.00 39.32 4.63
5620 6401 5.531287 GTCACTTGATAACCTTCAACCACTT 59.469 40.000 0.00 0.00 32.39 3.16
5653 6434 5.774690 TCTTGAAGGTGTGCATTTCCTAAAT 59.225 36.000 7.52 0.00 0.00 1.40
5661 6442 4.460263 TGTTACTCTTGAAGGTGTGCATT 58.540 39.130 0.00 0.00 0.00 3.56
5671 6452 6.751514 TTGTTTTGCTCTGTTACTCTTGAA 57.248 33.333 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.