Multiple sequence alignment - TraesCS5A01G119300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G119300 chr5A 100.000 6089 0 0 1 6089 248533541 248527453 0.000000e+00 11245.0
1 TraesCS5A01G119300 chr5D 94.006 2953 105 27 1 2929 193510292 193513196 0.000000e+00 4407.0
2 TraesCS5A01G119300 chr5D 97.095 1618 29 6 3693 5294 193519711 193521326 0.000000e+00 2712.0
3 TraesCS5A01G119300 chr5D 94.549 587 24 5 3088 3669 193519131 193519714 0.000000e+00 900.0
4 TraesCS5A01G119300 chr5D 85.854 410 13 15 5600 5986 193521324 193521711 1.590000e-105 394.0
5 TraesCS5A01G119300 chr5D 98.193 166 1 1 2927 3092 193513225 193513388 7.720000e-74 289.0
6 TraesCS5A01G119300 chr5D 85.586 111 12 3 5951 6060 417734515 417734622 4.990000e-21 113.0
7 TraesCS5A01G119300 chr5B 93.833 2724 97 28 235 2929 216398684 216401365 0.000000e+00 4034.0
8 TraesCS5A01G119300 chr5B 96.535 1674 44 2 3635 5294 216402365 216404038 0.000000e+00 2758.0
9 TraesCS5A01G119300 chr5B 96.229 716 19 4 2927 3636 216401394 216402107 0.000000e+00 1166.0
10 TraesCS5A01G119300 chr5B 98.324 179 3 0 1 179 216396836 216397014 1.270000e-81 315.0
11 TraesCS5A01G119300 chr5B 96.377 138 2 1 5600 5734 216404036 216404173 2.210000e-54 224.0
12 TraesCS5A01G119300 chr5B 96.774 62 1 1 185 246 216397078 216397138 1.080000e-17 102.0
13 TraesCS5A01G119300 chr5B 96.970 33 1 0 5983 6015 322552653 322552621 8.530000e-04 56.5
14 TraesCS5A01G119300 chr5B 97.059 34 0 1 3677 3709 402663527 402663494 8.530000e-04 56.5
15 TraesCS5A01G119300 chr6A 97.436 312 8 0 5291 5602 487277367 487277678 3.230000e-147 532.0
16 TraesCS5A01G119300 chr6A 97.368 38 0 1 5974 6011 448651783 448651819 5.100000e-06 63.9
17 TraesCS5A01G119300 chr4A 96.552 319 8 3 5286 5604 178778934 178779249 5.410000e-145 525.0
18 TraesCS5A01G119300 chr4A 96.141 311 11 1 5292 5601 629421836 629422146 1.960000e-139 507.0
19 TraesCS5A01G119300 chr4A 100.000 30 0 0 3677 3706 741977254 741977283 8.530000e-04 56.5
20 TraesCS5A01G119300 chr1A 97.705 305 7 0 5296 5600 402808040 402808344 5.410000e-145 525.0
21 TraesCS5A01G119300 chr1A 95.268 317 15 0 5292 5608 281230381 281230697 2.530000e-138 503.0
22 TraesCS5A01G119300 chr1A 85.542 83 6 3 2226 2302 164468790 164468708 1.410000e-11 82.4
23 TraesCS5A01G119300 chr1A 90.566 53 2 3 2216 2267 104228681 104228631 3.940000e-07 67.6
24 TraesCS5A01G119300 chr2A 96.815 314 8 2 5291 5603 63805035 63804723 1.940000e-144 523.0
25 TraesCS5A01G119300 chr7A 96.141 311 12 0 5291 5601 235454555 235454245 5.440000e-140 508.0
26 TraesCS5A01G119300 chr7A 78.696 230 25 16 5838 6049 115858695 115858472 1.380000e-26 132.0
27 TraesCS5A01G119300 chr2B 96.129 310 12 0 5292 5601 247519316 247519625 1.960000e-139 507.0
28 TraesCS5A01G119300 chr2B 90.278 72 6 1 2226 2296 226711190 226711119 6.500000e-15 93.5
29 TraesCS5A01G119300 chr2B 97.619 42 1 0 2226 2267 754761217 754761258 8.470000e-09 73.1
30 TraesCS5A01G119300 chr2B 85.000 60 9 0 5956 6015 731719130 731719189 1.830000e-05 62.1
31 TraesCS5A01G119300 chr2B 100.000 31 0 0 2267 2297 161026030 161026060 2.370000e-04 58.4
32 TraesCS5A01G119300 chrUn 94.207 328 18 1 5287 5614 94192530 94192204 3.280000e-137 499.0
33 TraesCS5A01G119300 chrUn 100.000 30 0 0 3677 3706 2312939 2312968 8.530000e-04 56.5
34 TraesCS5A01G119300 chr3A 76.518 247 28 13 5839 6059 439918703 439918461 2.320000e-19 108.0
35 TraesCS5A01G119300 chr3A 86.842 76 5 2 2226 2297 405938453 405938527 5.060000e-11 80.5
36 TraesCS5A01G119300 chr2D 78.238 193 24 9 5880 6056 28912846 28913036 2.320000e-19 108.0
37 TraesCS5A01G119300 chr2D 88.679 53 6 0 2215 2267 114515594 114515542 1.420000e-06 65.8
38 TraesCS5A01G119300 chr2D 76.800 125 20 6 5940 6059 491804157 491804037 1.830000e-05 62.1
39 TraesCS5A01G119300 chr1B 82.243 107 15 4 5957 6062 578098902 578098799 8.410000e-14 89.8
40 TraesCS5A01G119300 chr1B 92.857 42 3 0 5974 6015 441852033 441851992 1.830000e-05 62.1
41 TraesCS5A01G119300 chr1B 96.970 33 0 1 3677 3708 491536962 491536994 3.000000e-03 54.7
42 TraesCS5A01G119300 chr1B 96.970 33 0 1 3677 3708 578517115 578517083 3.000000e-03 54.7
43 TraesCS5A01G119300 chr3B 77.703 148 22 8 5824 5960 19605785 19605638 5.060000e-11 80.5
44 TraesCS5A01G119300 chr3B 77.703 148 22 8 5824 5960 19624609 19624462 5.060000e-11 80.5
45 TraesCS5A01G119300 chr3B 95.833 48 2 0 2220 2267 470852115 470852068 1.820000e-10 78.7
46 TraesCS5A01G119300 chr3B 91.111 45 1 3 3680 3724 758440957 758440916 2.370000e-04 58.4
47 TraesCS5A01G119300 chr3D 74.249 233 35 14 5839 6048 13489248 13489018 2.350000e-09 75.0
48 TraesCS5A01G119300 chr3D 97.143 35 0 1 3677 3710 184587260 184587294 2.370000e-04 58.4
49 TraesCS5A01G119300 chr4B 95.652 46 1 1 2248 2293 46939967 46940011 8.470000e-09 73.1
50 TraesCS5A01G119300 chr4B 92.857 42 3 0 5974 6015 472266522 472266563 1.830000e-05 62.1
51 TraesCS5A01G119300 chr7B 79.787 94 17 1 5956 6049 436601099 436601008 3.940000e-07 67.6
52 TraesCS5A01G119300 chr7B 100.000 30 0 0 2267 2296 60602408 60602437 8.530000e-04 56.5
53 TraesCS5A01G119300 chr1D 89.583 48 1 3 5983 6026 483150670 483150623 2.370000e-04 58.4
54 TraesCS5A01G119300 chr4D 100.000 30 0 0 2267 2296 302003456 302003485 8.530000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G119300 chr5A 248527453 248533541 6088 True 11245.000000 11245 100.000000 1 6089 1 chr5A.!!$R1 6088
1 TraesCS5A01G119300 chr5D 193510292 193513388 3096 False 2348.000000 4407 96.099500 1 3092 2 chr5D.!!$F2 3091
2 TraesCS5A01G119300 chr5D 193519131 193521711 2580 False 1335.333333 2712 92.499333 3088 5986 3 chr5D.!!$F3 2898
3 TraesCS5A01G119300 chr5B 216396836 216404173 7337 False 1433.166667 4034 96.345333 1 5734 6 chr5B.!!$F1 5733

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
424 2045 0.186873 ATCCCAATCCCAGGACATGC 59.813 55.000 0.00 0.00 34.20 4.06 F
1055 2705 0.745468 CTTGGAGGTAGGACGGTAGC 59.255 60.000 0.00 0.00 0.00 3.58 F
1277 2928 0.979665 TGCCACTTCTCTCAGGAAGG 59.020 55.000 8.71 0.00 44.82 3.46 F
1499 3153 1.539929 GCTCGCATCCTCTATTGTGCT 60.540 52.381 0.00 0.00 35.52 4.40 F
1559 3213 1.958579 TGCTTTGCTGCTTTCACATCT 59.041 42.857 0.00 0.00 0.00 2.90 F
2269 3931 2.921121 TGTCGCTGATTTAGTACAAGCG 59.079 45.455 8.94 8.94 44.29 4.68 F
2272 3934 2.921121 CGCTGATTTAGTACAAGCGACA 59.079 45.455 9.59 0.00 45.53 4.35 F
3918 5909 0.944386 TCCTTTGCAGTGCTCGTTTC 59.056 50.000 17.60 0.00 0.00 2.78 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1451 3105 1.173913 GCAAACTATCCGGCAAAGGT 58.826 50.000 0.0 0.0 0.00 3.50 R
2557 4224 1.619983 ACGACAACAACAAAAACGCC 58.380 45.000 0.0 0.0 0.00 5.68 R
2896 4563 4.409247 AGGTTTATAAGTACAGCCTCTGGG 59.591 45.833 0.0 0.0 35.51 4.45 R
3431 5135 4.577283 CCGGGTCAAAGAAAACTAAGAACA 59.423 41.667 0.0 0.0 0.00 3.18 R
3561 5265 6.441088 AAGAACTATTCTCCTGGTCAAAGT 57.559 37.500 0.0 0.0 39.61 2.66 R
3686 5650 0.394352 GTACTCCCTCCGTCCCGTAA 60.394 60.000 0.0 0.0 0.00 3.18 R
3950 5941 1.031571 TTAGGCCCAGCTTTGATGCG 61.032 55.000 0.0 0.0 38.13 4.73 R
5468 7473 0.104120 AACCAAAAACGGAAGCAGCC 59.896 50.000 0.0 0.0 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
160 161 9.453572 TCTTATGATGAATTAATAGGTGATGCC 57.546 33.333 0.00 0.00 37.58 4.40
242 301 1.526887 CTGATACGCAATAAGCACCCG 59.473 52.381 0.00 0.00 46.13 5.28
353 1974 0.769873 ATGAGGTCATGATGGCTCCC 59.230 55.000 0.00 0.00 34.83 4.30
424 2045 0.186873 ATCCCAATCCCAGGACATGC 59.813 55.000 0.00 0.00 34.20 4.06
496 2117 1.738030 GCATGAATCCCTTGCAGCAAC 60.738 52.381 2.83 0.00 43.22 4.17
632 2253 3.222855 CGCCATCTCGCTCCTCCT 61.223 66.667 0.00 0.00 0.00 3.69
716 2339 4.274950 TCGAACCAACAAGTCAAAGAATCC 59.725 41.667 0.00 0.00 0.00 3.01
720 2343 6.484364 ACCAACAAGTCAAAGAATCCAATT 57.516 33.333 0.00 0.00 0.00 2.32
854 2479 4.446413 ATCCCGCGGTCCGTTGTC 62.446 66.667 26.12 0.00 34.38 3.18
883 2512 1.379176 CAGCCGAGACCCAGAGAGA 60.379 63.158 0.00 0.00 0.00 3.10
984 2634 1.221414 GAGAGCGAGAGAGAGAGAGC 58.779 60.000 0.00 0.00 0.00 4.09
1012 2662 0.907486 TGAGGTGATGGAGCTTCTGG 59.093 55.000 0.00 0.00 30.42 3.86
1055 2705 0.745468 CTTGGAGGTAGGACGGTAGC 59.255 60.000 0.00 0.00 0.00 3.58
1071 2721 2.355108 GGTAGCTCCACTTGCTTCATCA 60.355 50.000 0.00 0.00 41.46 3.07
1085 2735 3.561310 GCTTCATCACTTGCCGATTCATA 59.439 43.478 0.00 0.00 0.00 2.15
1217 2868 7.864307 AGTCTGTTTCTGTTTATACGTGTAC 57.136 36.000 0.00 0.00 0.00 2.90
1221 2872 2.784505 TCTGTTTATACGTGTACGGCG 58.215 47.619 4.80 4.80 44.95 6.46
1238 2889 1.068741 GGCGGTAACCTGACCTCTATG 59.931 57.143 0.00 0.00 37.34 2.23
1277 2928 0.979665 TGCCACTTCTCTCAGGAAGG 59.020 55.000 8.71 0.00 44.82 3.46
1383 3034 3.282374 AACCTGAATGGGGGTCGGC 62.282 63.158 0.00 0.00 41.11 5.54
1419 3073 1.671328 CGAGTCACGATGGAGCTTCTA 59.329 52.381 0.00 0.00 45.77 2.10
1499 3153 1.539929 GCTCGCATCCTCTATTGTGCT 60.540 52.381 0.00 0.00 35.52 4.40
1530 3184 4.526970 CATGGGTCATAACAAGGTAAGCT 58.473 43.478 0.00 0.00 0.00 3.74
1559 3213 1.958579 TGCTTTGCTGCTTTCACATCT 59.041 42.857 0.00 0.00 0.00 2.90
1644 3298 7.766736 AACTGAGGGGAATAAAGGTTATAGT 57.233 36.000 0.00 0.00 0.00 2.12
1723 3377 7.041098 CCAACTATGTTTTGCTACTTCAGTCTT 60.041 37.037 0.00 0.00 0.00 3.01
1884 3538 7.704899 AGCATAATCATGACATGTCAAATTGTG 59.295 33.333 32.41 32.41 43.58 3.33
2007 3661 3.412237 TGGAGCTTACACCAAAGGTAC 57.588 47.619 0.00 0.00 37.32 3.34
2110 3765 9.635404 TTCCCTTGTCTTTTAAATTTCTCTGTA 57.365 29.630 0.00 0.00 0.00 2.74
2197 3853 8.518430 TTGCATGCTAAAAATGGACTATAGAA 57.482 30.769 20.33 0.00 0.00 2.10
2235 3897 6.200878 ACAAAGAAAAAGATACTCCCTCCA 57.799 37.500 0.00 0.00 0.00 3.86
2255 3917 5.056480 TCCATTCCATATTAGTTGTCGCTG 58.944 41.667 0.00 0.00 0.00 5.18
2256 3918 5.056480 CCATTCCATATTAGTTGTCGCTGA 58.944 41.667 0.00 0.00 0.00 4.26
2259 3921 7.255242 CCATTCCATATTAGTTGTCGCTGATTT 60.255 37.037 0.00 0.00 0.00 2.17
2261 3923 7.946655 TCCATATTAGTTGTCGCTGATTTAG 57.053 36.000 0.00 0.00 0.00 1.85
2262 3924 7.497595 TCCATATTAGTTGTCGCTGATTTAGT 58.502 34.615 0.00 0.00 0.00 2.24
2263 3925 8.635328 TCCATATTAGTTGTCGCTGATTTAGTA 58.365 33.333 0.00 0.00 0.00 1.82
2264 3926 8.700644 CCATATTAGTTGTCGCTGATTTAGTAC 58.299 37.037 0.00 0.00 0.00 2.73
2265 3927 9.244799 CATATTAGTTGTCGCTGATTTAGTACA 57.755 33.333 0.00 0.00 0.00 2.90
2266 3928 9.811995 ATATTAGTTGTCGCTGATTTAGTACAA 57.188 29.630 0.00 0.00 34.31 2.41
2267 3929 7.576750 TTAGTTGTCGCTGATTTAGTACAAG 57.423 36.000 0.00 0.00 36.07 3.16
2268 3930 4.389077 AGTTGTCGCTGATTTAGTACAAGC 59.611 41.667 0.00 0.00 36.07 4.01
2269 3931 2.921121 TGTCGCTGATTTAGTACAAGCG 59.079 45.455 8.94 8.94 44.29 4.68
2271 3933 3.176708 TCGCTGATTTAGTACAAGCGAC 58.823 45.455 13.42 0.00 46.07 5.19
2272 3934 2.921121 CGCTGATTTAGTACAAGCGACA 59.079 45.455 9.59 0.00 45.53 4.35
2273 3935 3.366724 CGCTGATTTAGTACAAGCGACAA 59.633 43.478 9.59 0.00 45.53 3.18
2274 3936 4.638963 GCTGATTTAGTACAAGCGACAAC 58.361 43.478 0.00 0.00 0.00 3.32
2275 3937 4.389077 GCTGATTTAGTACAAGCGACAACT 59.611 41.667 0.00 0.00 0.00 3.16
2276 3938 5.575606 GCTGATTTAGTACAAGCGACAACTA 59.424 40.000 0.00 0.00 0.00 2.24
2277 3939 6.090358 GCTGATTTAGTACAAGCGACAACTAA 59.910 38.462 0.00 0.00 33.72 2.24
2278 3940 7.201530 GCTGATTTAGTACAAGCGACAACTAAT 60.202 37.037 0.00 0.00 35.12 1.73
2298 3960 7.293073 ACTAATATAGAACGGAGGGAGTACAA 58.707 38.462 0.00 0.00 0.00 2.41
2358 4020 9.803507 TGCATATTTCTTTCTCATATCCTCATT 57.196 29.630 0.00 0.00 0.00 2.57
2537 4204 5.724328 TCAAGAACATACATCACTGGACTC 58.276 41.667 0.00 0.00 0.00 3.36
2557 4224 4.396166 ACTCGAAAAGGTAATTGCCATCAG 59.604 41.667 15.49 11.20 0.00 2.90
2657 4324 9.366216 GCATTACCTTTTCCCAACTTAATAAAG 57.634 33.333 0.00 0.00 38.77 1.85
2662 4329 9.996554 ACCTTTTCCCAACTTAATAAAGAATTG 57.003 29.630 0.00 0.00 36.50 2.32
2896 4563 6.580041 CACTTTACTGTTTCATGAATGCACTC 59.420 38.462 9.40 0.00 0.00 3.51
3125 4825 3.326006 ACCTCTCAATCTCTCAGTGCAAA 59.674 43.478 0.00 0.00 0.00 3.68
3209 4909 5.811399 TGTTGAAATGAACAGAGTTTCGT 57.189 34.783 0.00 0.00 35.23 3.85
3314 5014 7.278875 AGAGGAAGTCCAAGATGATATTGTTC 58.721 38.462 0.00 0.00 38.89 3.18
3332 5032 5.940192 TGTTCTGTGCAGTGTTAATAAGG 57.060 39.130 0.00 0.00 0.00 2.69
3393 5097 6.259550 AGATAGTTTGTGCATTCTTTGACC 57.740 37.500 0.00 0.00 0.00 4.02
3404 5108 4.384647 GCATTCTTTGACCAGGAGGATAGT 60.385 45.833 0.00 0.00 38.69 2.12
3431 5135 3.778954 CTTTCCTTTGACCAGGAGAGT 57.221 47.619 0.00 0.00 44.18 3.24
3586 5290 7.616313 ACTTTGACCAGGAGAATAGTTCTTAG 58.384 38.462 0.00 0.00 40.87 2.18
3615 5319 2.981859 AACTCGGCGGATAGTTCATT 57.018 45.000 7.21 0.00 30.08 2.57
3624 5329 5.050972 CGGCGGATAGTTCATTCTTTACTTC 60.051 44.000 0.00 0.00 0.00 3.01
3650 5614 8.532819 CCTTAACTGATATTATGTACTCCCTCC 58.467 40.741 0.00 0.00 0.00 4.30
3655 5619 3.614568 ATTATGTACTCCCTCCGTCCT 57.385 47.619 0.00 0.00 0.00 3.85
3659 5623 4.949966 ATGTACTCCCTCCGTCCTATAT 57.050 45.455 0.00 0.00 0.00 0.86
3665 5629 8.051535 TGTACTCCCTCCGTCCTATATTATAAG 58.948 40.741 0.00 0.00 0.00 1.73
3666 5630 7.281366 ACTCCCTCCGTCCTATATTATAAGA 57.719 40.000 0.00 0.00 0.00 2.10
3667 5631 7.118060 ACTCCCTCCGTCCTATATTATAAGAC 58.882 42.308 3.31 3.31 0.00 3.01
3669 5633 5.884792 CCCTCCGTCCTATATTATAAGACGT 59.115 44.000 23.40 0.00 46.62 4.34
3670 5634 6.376581 CCCTCCGTCCTATATTATAAGACGTT 59.623 42.308 23.40 0.00 46.62 3.99
3671 5635 7.094032 CCCTCCGTCCTATATTATAAGACGTTT 60.094 40.741 23.40 0.00 46.62 3.60
3672 5636 8.302438 CCTCCGTCCTATATTATAAGACGTTTT 58.698 37.037 23.40 0.00 46.62 2.43
3673 5637 9.688592 CTCCGTCCTATATTATAAGACGTTTTT 57.311 33.333 23.40 0.00 46.62 1.94
3674 5638 9.467258 TCCGTCCTATATTATAAGACGTTTTTG 57.533 33.333 23.40 13.57 46.62 2.44
3675 5639 8.219105 CCGTCCTATATTATAAGACGTTTTTGC 58.781 37.037 23.40 0.00 46.62 3.68
3676 5640 8.757789 CGTCCTATATTATAAGACGTTTTTGCA 58.242 33.333 19.72 0.00 43.89 4.08
3677 5641 9.859692 GTCCTATATTATAAGACGTTTTTGCAC 57.140 33.333 0.00 0.00 0.00 4.57
3678 5642 8.757789 TCCTATATTATAAGACGTTTTTGCACG 58.242 33.333 0.00 0.00 46.04 5.34
3690 5654 6.676304 CGTTTTTGCACGTCTTATATTACG 57.324 37.500 5.98 5.98 44.47 3.18
3691 5655 5.669430 CGTTTTTGCACGTCTTATATTACGG 59.331 40.000 10.89 3.29 43.25 4.02
3918 5909 0.944386 TCCTTTGCAGTGCTCGTTTC 59.056 50.000 17.60 0.00 0.00 2.78
3950 5941 4.521256 TGTTGTATGTTTTCCTAGGTTGCC 59.479 41.667 9.08 0.00 0.00 4.52
4232 6223 3.195610 TCACCTTACATACTCACTGCTGG 59.804 47.826 0.00 0.00 0.00 4.85
4272 6263 8.868522 ACCATGATAGTCATTTTCTTTTCTGA 57.131 30.769 0.00 0.00 34.28 3.27
4320 6311 2.762327 TCCCGGTACTGGTAAGATGAAC 59.238 50.000 19.59 0.00 33.17 3.18
4674 6665 1.127567 TGACTCCACCCACCCTTCTG 61.128 60.000 0.00 0.00 0.00 3.02
4895 6886 2.746359 AGCCTCGCTGCTCAGTTT 59.254 55.556 0.00 0.00 36.75 2.66
4905 6896 1.006571 GCTCAGTTTGACGACCCGA 60.007 57.895 0.00 0.00 0.00 5.14
4916 6907 2.028839 TGACGACCCGACAATGTTGTAT 60.029 45.455 0.00 0.00 42.43 2.29
4949 6940 0.761802 GGAGGATCAAGGAGGCGATT 59.238 55.000 0.00 0.00 36.25 3.34
5012 7003 4.505918 CGGGAGATGAGGTGTAGACTCTAT 60.506 50.000 0.00 0.00 35.98 1.98
5013 7004 5.007682 GGGAGATGAGGTGTAGACTCTATC 58.992 50.000 0.00 0.00 35.98 2.08
5157 7148 4.015084 GCATGGATTCATTAGGGATCCTG 58.985 47.826 12.58 1.58 34.61 3.86
5198 7201 5.880332 GGGTCATACATAGAATTGTGTGTGT 59.120 40.000 14.17 5.66 38.24 3.72
5200 7203 6.250819 GTCATACATAGAATTGTGTGTGTGC 58.749 40.000 19.26 12.92 38.24 4.57
5202 7205 3.138304 ACATAGAATTGTGTGTGTGCGT 58.862 40.909 4.11 0.00 0.00 5.24
5295 7300 9.233649 ACGTTATCTATCTCTAACTCCTTATGG 57.766 37.037 0.00 0.00 0.00 2.74
5296 7301 8.185505 CGTTATCTATCTCTAACTCCTTATGGC 58.814 40.741 0.00 0.00 0.00 4.40
5297 7302 8.471609 GTTATCTATCTCTAACTCCTTATGGCC 58.528 40.741 0.00 0.00 0.00 5.36
5298 7303 5.334421 TCTATCTCTAACTCCTTATGGCCC 58.666 45.833 0.00 0.00 0.00 5.80
5299 7304 3.708236 TCTCTAACTCCTTATGGCCCT 57.292 47.619 0.00 0.00 0.00 5.19
5300 7305 3.309296 TCTCTAACTCCTTATGGCCCTG 58.691 50.000 0.00 0.00 0.00 4.45
5301 7306 3.041946 CTCTAACTCCTTATGGCCCTGT 58.958 50.000 0.00 0.00 0.00 4.00
5302 7307 3.456277 CTCTAACTCCTTATGGCCCTGTT 59.544 47.826 0.00 0.00 0.00 3.16
5303 7308 3.850173 TCTAACTCCTTATGGCCCTGTTT 59.150 43.478 0.00 0.00 0.00 2.83
5304 7309 2.514458 ACTCCTTATGGCCCTGTTTG 57.486 50.000 0.00 0.00 0.00 2.93
5305 7310 1.005924 ACTCCTTATGGCCCTGTTTGG 59.994 52.381 0.00 0.00 0.00 3.28
5306 7311 1.005924 CTCCTTATGGCCCTGTTTGGT 59.994 52.381 0.00 0.00 0.00 3.67
5307 7312 1.431243 TCCTTATGGCCCTGTTTGGTT 59.569 47.619 0.00 0.00 0.00 3.67
5308 7313 1.824852 CCTTATGGCCCTGTTTGGTTC 59.175 52.381 0.00 0.00 0.00 3.62
5309 7314 1.472480 CTTATGGCCCTGTTTGGTTCG 59.528 52.381 0.00 0.00 0.00 3.95
5310 7315 0.322997 TATGGCCCTGTTTGGTTCGG 60.323 55.000 0.00 0.00 0.00 4.30
5311 7316 3.680786 GGCCCTGTTTGGTTCGGC 61.681 66.667 0.00 0.00 38.96 5.54
5312 7317 2.597510 GCCCTGTTTGGTTCGGCT 60.598 61.111 0.00 0.00 36.65 5.52
5313 7318 2.919494 GCCCTGTTTGGTTCGGCTG 61.919 63.158 0.00 0.00 36.65 4.85
5314 7319 1.528309 CCCTGTTTGGTTCGGCTGT 60.528 57.895 0.00 0.00 0.00 4.40
5315 7320 1.654220 CCTGTTTGGTTCGGCTGTG 59.346 57.895 0.00 0.00 0.00 3.66
5316 7321 1.654220 CTGTTTGGTTCGGCTGTGG 59.346 57.895 0.00 0.00 0.00 4.17
5317 7322 0.817634 CTGTTTGGTTCGGCTGTGGA 60.818 55.000 0.00 0.00 0.00 4.02
5318 7323 0.179004 TGTTTGGTTCGGCTGTGGAT 60.179 50.000 0.00 0.00 0.00 3.41
5319 7324 0.958822 GTTTGGTTCGGCTGTGGATT 59.041 50.000 0.00 0.00 0.00 3.01
5320 7325 1.339929 GTTTGGTTCGGCTGTGGATTT 59.660 47.619 0.00 0.00 0.00 2.17
5321 7326 1.243902 TTGGTTCGGCTGTGGATTTC 58.756 50.000 0.00 0.00 0.00 2.17
5322 7327 0.400213 TGGTTCGGCTGTGGATTTCT 59.600 50.000 0.00 0.00 0.00 2.52
5323 7328 1.626321 TGGTTCGGCTGTGGATTTCTA 59.374 47.619 0.00 0.00 0.00 2.10
5324 7329 2.039216 TGGTTCGGCTGTGGATTTCTAA 59.961 45.455 0.00 0.00 0.00 2.10
5325 7330 3.078837 GGTTCGGCTGTGGATTTCTAAA 58.921 45.455 0.00 0.00 0.00 1.85
5326 7331 3.504520 GGTTCGGCTGTGGATTTCTAAAA 59.495 43.478 0.00 0.00 0.00 1.52
5327 7332 4.379499 GGTTCGGCTGTGGATTTCTAAAAG 60.379 45.833 0.00 0.00 0.00 2.27
5328 7333 4.015872 TCGGCTGTGGATTTCTAAAAGT 57.984 40.909 0.00 0.00 0.00 2.66
5329 7334 5.155278 TCGGCTGTGGATTTCTAAAAGTA 57.845 39.130 0.00 0.00 0.00 2.24
5330 7335 5.175859 TCGGCTGTGGATTTCTAAAAGTAG 58.824 41.667 0.00 0.00 0.00 2.57
5331 7336 4.201822 CGGCTGTGGATTTCTAAAAGTAGC 60.202 45.833 0.00 0.00 0.00 3.58
5332 7337 4.944317 GGCTGTGGATTTCTAAAAGTAGCT 59.056 41.667 0.00 0.00 0.00 3.32
5333 7338 5.163713 GGCTGTGGATTTCTAAAAGTAGCTG 60.164 44.000 0.00 0.00 0.00 4.24
5334 7339 5.412904 GCTGTGGATTTCTAAAAGTAGCTGT 59.587 40.000 0.00 0.00 0.00 4.40
5335 7340 6.621596 GCTGTGGATTTCTAAAAGTAGCTGTG 60.622 42.308 0.00 0.00 0.00 3.66
5336 7341 6.530120 TGTGGATTTCTAAAAGTAGCTGTGA 58.470 36.000 0.00 0.00 0.00 3.58
5337 7342 6.995686 TGTGGATTTCTAAAAGTAGCTGTGAA 59.004 34.615 0.00 0.00 0.00 3.18
5338 7343 7.500892 TGTGGATTTCTAAAAGTAGCTGTGAAA 59.499 33.333 0.00 0.00 0.00 2.69
5339 7344 8.349983 GTGGATTTCTAAAAGTAGCTGTGAAAA 58.650 33.333 0.00 0.00 0.00 2.29
5340 7345 8.908903 TGGATTTCTAAAAGTAGCTGTGAAAAA 58.091 29.630 0.00 0.00 0.00 1.94
5341 7346 9.914131 GGATTTCTAAAAGTAGCTGTGAAAAAT 57.086 29.630 0.00 0.00 0.00 1.82
5344 7349 9.950680 TTTCTAAAAGTAGCTGTGAAAAATCTG 57.049 29.630 0.00 0.00 0.00 2.90
5345 7350 7.584987 TCTAAAAGTAGCTGTGAAAAATCTGC 58.415 34.615 0.00 0.00 0.00 4.26
5346 7351 6.396829 AAAAGTAGCTGTGAAAAATCTGCT 57.603 33.333 0.00 0.00 40.71 4.24
5347 7352 5.368256 AAGTAGCTGTGAAAAATCTGCTG 57.632 39.130 0.00 0.00 38.77 4.41
5348 7353 4.392940 AGTAGCTGTGAAAAATCTGCTGT 58.607 39.130 0.00 0.00 38.77 4.40
5349 7354 3.637998 AGCTGTGAAAAATCTGCTGTG 57.362 42.857 0.00 0.00 37.44 3.66
5350 7355 3.216800 AGCTGTGAAAAATCTGCTGTGA 58.783 40.909 0.00 0.00 37.44 3.58
5351 7356 3.633525 AGCTGTGAAAAATCTGCTGTGAA 59.366 39.130 0.00 0.00 37.44 3.18
5352 7357 4.098349 AGCTGTGAAAAATCTGCTGTGAAA 59.902 37.500 0.00 0.00 37.44 2.69
5353 7358 4.805192 GCTGTGAAAAATCTGCTGTGAAAA 59.195 37.500 0.00 0.00 0.00 2.29
5354 7359 5.291614 GCTGTGAAAAATCTGCTGTGAAAAA 59.708 36.000 0.00 0.00 0.00 1.94
5376 7381 8.791327 AAAAACAGTTGTGGAAAATCTGATTT 57.209 26.923 9.76 9.76 34.41 2.17
5377 7382 7.775397 AAACAGTTGTGGAAAATCTGATTTG 57.225 32.000 15.80 4.23 31.77 2.32
5378 7383 6.713762 ACAGTTGTGGAAAATCTGATTTGA 57.286 33.333 15.80 1.69 31.77 2.69
5379 7384 7.111247 ACAGTTGTGGAAAATCTGATTTGAA 57.889 32.000 15.80 3.02 31.77 2.69
5380 7385 7.555087 ACAGTTGTGGAAAATCTGATTTGAAA 58.445 30.769 15.80 2.69 31.77 2.69
5381 7386 8.040132 ACAGTTGTGGAAAATCTGATTTGAAAA 58.960 29.630 15.80 3.21 31.77 2.29
5382 7387 8.881743 CAGTTGTGGAAAATCTGATTTGAAAAA 58.118 29.630 15.80 4.43 31.77 1.94
5383 7388 9.101655 AGTTGTGGAAAATCTGATTTGAAAAAG 57.898 29.630 15.80 0.00 31.77 2.27
5384 7389 9.097257 GTTGTGGAAAATCTGATTTGAAAAAGA 57.903 29.630 15.80 0.00 31.77 2.52
5385 7390 9.835389 TTGTGGAAAATCTGATTTGAAAAAGAT 57.165 25.926 15.80 0.00 31.77 2.40
5386 7391 9.263538 TGTGGAAAATCTGATTTGAAAAAGATG 57.736 29.630 15.80 0.00 31.77 2.90
5387 7392 9.264719 GTGGAAAATCTGATTTGAAAAAGATGT 57.735 29.630 15.80 0.00 31.77 3.06
5393 7398 8.868522 ATCTGATTTGAAAAAGATGTAGGTCA 57.131 30.769 5.89 0.00 0.00 4.02
5394 7399 8.868522 TCTGATTTGAAAAAGATGTAGGTCAT 57.131 30.769 0.00 0.00 39.77 3.06
5395 7400 9.300681 TCTGATTTGAAAAAGATGTAGGTCATT 57.699 29.630 0.00 0.00 36.83 2.57
5396 7401 9.918630 CTGATTTGAAAAAGATGTAGGTCATTT 57.081 29.630 0.00 0.00 36.83 2.32
5397 7402 9.695526 TGATTTGAAAAAGATGTAGGTCATTTG 57.304 29.630 0.00 0.00 36.83 2.32
5398 7403 9.143631 GATTTGAAAAAGATGTAGGTCATTTGG 57.856 33.333 0.00 0.00 36.83 3.28
5399 7404 6.024552 TGAAAAAGATGTAGGTCATTTGGC 57.975 37.500 0.00 0.00 36.83 4.52
5400 7405 5.538053 TGAAAAAGATGTAGGTCATTTGGCA 59.462 36.000 0.00 0.00 36.83 4.92
5401 7406 6.041409 TGAAAAAGATGTAGGTCATTTGGCAA 59.959 34.615 0.00 0.00 36.83 4.52
5402 7407 6.418057 AAAAGATGTAGGTCATTTGGCAAA 57.582 33.333 16.01 16.01 36.83 3.68
5403 7408 5.391312 AAGATGTAGGTCATTTGGCAAAC 57.609 39.130 16.00 3.12 36.83 2.93
5404 7409 3.763897 AGATGTAGGTCATTTGGCAAACC 59.236 43.478 16.00 13.12 36.83 3.27
5405 7410 3.509575 GATGTAGGTCATTTGGCAAACCA 59.490 43.478 16.00 1.33 39.74 3.67
5406 7411 4.380867 GATGTAGGTCATTTGGCAAACCAG 60.381 45.833 16.00 8.58 41.40 4.00
5407 7412 7.845340 GATGTAGGTCATTTGGCAAACCAGC 62.845 48.000 16.00 13.65 41.40 4.85
5415 7420 2.284754 TGGCAAACCAGCTGATACAA 57.715 45.000 17.39 0.00 42.67 2.41
5416 7421 1.885887 TGGCAAACCAGCTGATACAAC 59.114 47.619 17.39 1.73 42.67 3.32
5417 7422 1.202348 GGCAAACCAGCTGATACAACC 59.798 52.381 17.39 5.57 35.26 3.77
5418 7423 2.162681 GCAAACCAGCTGATACAACCT 58.837 47.619 17.39 0.00 0.00 3.50
5419 7424 2.558359 GCAAACCAGCTGATACAACCTT 59.442 45.455 17.39 0.00 0.00 3.50
5420 7425 3.005791 GCAAACCAGCTGATACAACCTTT 59.994 43.478 17.39 0.00 0.00 3.11
5421 7426 4.501400 GCAAACCAGCTGATACAACCTTTT 60.501 41.667 17.39 0.00 0.00 2.27
5422 7427 5.222631 CAAACCAGCTGATACAACCTTTTC 58.777 41.667 17.39 0.00 0.00 2.29
5423 7428 4.098914 ACCAGCTGATACAACCTTTTCA 57.901 40.909 17.39 0.00 0.00 2.69
5424 7429 4.074970 ACCAGCTGATACAACCTTTTCAG 58.925 43.478 17.39 0.00 38.86 3.02
5425 7430 4.202461 ACCAGCTGATACAACCTTTTCAGA 60.202 41.667 17.39 0.00 38.25 3.27
5426 7431 4.946157 CCAGCTGATACAACCTTTTCAGAT 59.054 41.667 17.39 0.00 38.25 2.90
5427 7432 5.416952 CCAGCTGATACAACCTTTTCAGATT 59.583 40.000 17.39 0.00 38.25 2.40
5428 7433 6.071728 CCAGCTGATACAACCTTTTCAGATTT 60.072 38.462 17.39 0.00 38.25 2.17
5429 7434 7.373493 CAGCTGATACAACCTTTTCAGATTTT 58.627 34.615 8.42 0.00 38.25 1.82
5430 7435 7.327761 CAGCTGATACAACCTTTTCAGATTTTG 59.672 37.037 8.42 0.00 38.25 2.44
5431 7436 6.587608 GCTGATACAACCTTTTCAGATTTTGG 59.412 38.462 3.11 0.00 38.25 3.28
5432 7437 6.454795 TGATACAACCTTTTCAGATTTTGGC 58.545 36.000 0.00 0.00 0.00 4.52
5433 7438 4.071961 ACAACCTTTTCAGATTTTGGCC 57.928 40.909 0.00 0.00 0.00 5.36
5434 7439 3.181455 ACAACCTTTTCAGATTTTGGCCC 60.181 43.478 0.00 0.00 0.00 5.80
5435 7440 1.618343 ACCTTTTCAGATTTTGGCCCG 59.382 47.619 0.00 0.00 0.00 6.13
5436 7441 1.672737 CCTTTTCAGATTTTGGCCCGC 60.673 52.381 0.00 0.00 0.00 6.13
5437 7442 1.000731 CTTTTCAGATTTTGGCCCGCA 59.999 47.619 0.00 0.00 0.00 5.69
5438 7443 0.602562 TTTCAGATTTTGGCCCGCAG 59.397 50.000 0.00 0.00 0.00 5.18
5439 7444 1.876497 TTCAGATTTTGGCCCGCAGC 61.876 55.000 0.00 0.00 42.60 5.25
5440 7445 3.443045 AGATTTTGGCCCGCAGCG 61.443 61.111 8.18 8.18 45.17 5.18
5453 7458 1.818850 CGCAGCGGAATCAGATTTTG 58.181 50.000 7.00 0.00 0.00 2.44
5454 7459 1.532505 CGCAGCGGAATCAGATTTTGG 60.533 52.381 7.00 0.00 0.00 3.28
5455 7460 1.745087 GCAGCGGAATCAGATTTTGGA 59.255 47.619 0.00 0.00 0.00 3.53
5456 7461 2.164219 GCAGCGGAATCAGATTTTGGAA 59.836 45.455 0.00 0.00 0.00 3.53
5457 7462 3.367292 GCAGCGGAATCAGATTTTGGAAA 60.367 43.478 0.00 0.00 0.00 3.13
5458 7463 4.418392 CAGCGGAATCAGATTTTGGAAAG 58.582 43.478 0.00 0.00 0.00 2.62
5459 7464 3.119352 AGCGGAATCAGATTTTGGAAAGC 60.119 43.478 0.00 0.00 0.00 3.51
5460 7465 3.367292 GCGGAATCAGATTTTGGAAAGCA 60.367 43.478 0.00 0.00 0.00 3.91
5461 7466 4.168760 CGGAATCAGATTTTGGAAAGCAC 58.831 43.478 0.00 0.00 0.00 4.40
5462 7467 4.168760 GGAATCAGATTTTGGAAAGCACG 58.831 43.478 0.00 0.00 0.00 5.34
5463 7468 4.321230 GGAATCAGATTTTGGAAAGCACGT 60.321 41.667 0.00 0.00 0.00 4.49
5464 7469 3.896648 TCAGATTTTGGAAAGCACGTC 57.103 42.857 0.00 0.00 0.00 4.34
5465 7470 2.552315 TCAGATTTTGGAAAGCACGTCC 59.448 45.455 0.00 0.00 35.55 4.79
5466 7471 2.554032 CAGATTTTGGAAAGCACGTCCT 59.446 45.455 0.00 0.00 36.03 3.85
5467 7472 2.554032 AGATTTTGGAAAGCACGTCCTG 59.446 45.455 0.00 0.00 36.03 3.86
5468 7473 1.028905 TTTTGGAAAGCACGTCCTGG 58.971 50.000 0.00 0.00 36.03 4.45
5469 7474 0.821711 TTTGGAAAGCACGTCCTGGG 60.822 55.000 0.00 0.00 36.03 4.45
5470 7475 3.056328 GGAAAGCACGTCCTGGGC 61.056 66.667 0.00 0.00 31.94 5.36
5471 7476 2.032681 GAAAGCACGTCCTGGGCT 59.967 61.111 0.00 0.00 40.14 5.19
5472 7477 2.281761 AAAGCACGTCCTGGGCTG 60.282 61.111 0.00 0.00 38.04 4.85
5476 7481 2.743928 CACGTCCTGGGCTGCTTC 60.744 66.667 0.00 0.00 0.00 3.86
5477 7482 4.021925 ACGTCCTGGGCTGCTTCC 62.022 66.667 0.00 0.00 0.00 3.46
5479 7484 4.021925 GTCCTGGGCTGCTTCCGT 62.022 66.667 0.00 0.00 0.00 4.69
5480 7485 3.249189 TCCTGGGCTGCTTCCGTT 61.249 61.111 0.00 0.00 0.00 4.44
5481 7486 2.282462 CCTGGGCTGCTTCCGTTT 60.282 61.111 0.00 0.00 0.00 3.60
5482 7487 1.903404 CCTGGGCTGCTTCCGTTTT 60.903 57.895 0.00 0.00 0.00 2.43
5483 7488 1.463553 CCTGGGCTGCTTCCGTTTTT 61.464 55.000 0.00 0.00 0.00 1.94
5484 7489 0.318955 CTGGGCTGCTTCCGTTTTTG 60.319 55.000 0.00 0.00 0.00 2.44
5485 7490 1.006220 GGGCTGCTTCCGTTTTTGG 60.006 57.895 0.00 0.00 0.00 3.28
5486 7491 1.739667 GGCTGCTTCCGTTTTTGGT 59.260 52.632 0.00 0.00 0.00 3.67
5487 7492 0.104120 GGCTGCTTCCGTTTTTGGTT 59.896 50.000 0.00 0.00 0.00 3.67
5488 7493 1.487482 GCTGCTTCCGTTTTTGGTTC 58.513 50.000 0.00 0.00 0.00 3.62
5489 7494 1.202359 GCTGCTTCCGTTTTTGGTTCA 60.202 47.619 0.00 0.00 0.00 3.18
5490 7495 2.731217 CTGCTTCCGTTTTTGGTTCAG 58.269 47.619 0.00 0.00 0.00 3.02
5491 7496 2.357637 CTGCTTCCGTTTTTGGTTCAGA 59.642 45.455 0.00 0.00 0.00 3.27
5492 7497 2.955660 TGCTTCCGTTTTTGGTTCAGAT 59.044 40.909 0.00 0.00 0.00 2.90
5493 7498 3.383185 TGCTTCCGTTTTTGGTTCAGATT 59.617 39.130 0.00 0.00 0.00 2.40
5494 7499 4.142049 TGCTTCCGTTTTTGGTTCAGATTT 60.142 37.500 0.00 0.00 0.00 2.17
5495 7500 4.808895 GCTTCCGTTTTTGGTTCAGATTTT 59.191 37.500 0.00 0.00 0.00 1.82
5496 7501 5.276820 GCTTCCGTTTTTGGTTCAGATTTTG 60.277 40.000 0.00 0.00 0.00 2.44
5497 7502 4.688021 TCCGTTTTTGGTTCAGATTTTGG 58.312 39.130 0.00 0.00 0.00 3.28
5498 7503 3.247411 CCGTTTTTGGTTCAGATTTTGGC 59.753 43.478 0.00 0.00 0.00 4.52
5499 7504 3.868077 CGTTTTTGGTTCAGATTTTGGCA 59.132 39.130 0.00 0.00 0.00 4.92
5500 7505 4.025813 CGTTTTTGGTTCAGATTTTGGCAG 60.026 41.667 0.00 0.00 0.00 4.85
5501 7506 2.818130 TTGGTTCAGATTTTGGCAGC 57.182 45.000 0.00 0.00 0.00 5.25
5502 7507 1.702182 TGGTTCAGATTTTGGCAGCA 58.298 45.000 0.00 0.00 0.00 4.41
5503 7508 1.614903 TGGTTCAGATTTTGGCAGCAG 59.385 47.619 0.00 0.00 0.00 4.24
5504 7509 1.888512 GGTTCAGATTTTGGCAGCAGA 59.111 47.619 0.00 0.00 0.00 4.26
5505 7510 2.494870 GGTTCAGATTTTGGCAGCAGAT 59.505 45.455 0.00 0.00 0.00 2.90
5506 7511 3.056322 GGTTCAGATTTTGGCAGCAGATT 60.056 43.478 0.00 0.00 0.00 2.40
5507 7512 4.562143 GGTTCAGATTTTGGCAGCAGATTT 60.562 41.667 0.00 0.00 0.00 2.17
5508 7513 4.445452 TCAGATTTTGGCAGCAGATTTC 57.555 40.909 0.00 0.00 0.00 2.17
5509 7514 4.084287 TCAGATTTTGGCAGCAGATTTCT 58.916 39.130 0.00 0.00 0.00 2.52
5510 7515 4.082408 TCAGATTTTGGCAGCAGATTTCTG 60.082 41.667 3.13 3.13 46.40 3.02
5511 7516 3.194968 AGATTTTGGCAGCAGATTTCTGG 59.805 43.478 9.49 0.00 43.94 3.86
5512 7517 2.291209 TTTGGCAGCAGATTTCTGGA 57.709 45.000 9.49 0.00 43.94 3.86
5513 7518 2.291209 TTGGCAGCAGATTTCTGGAA 57.709 45.000 9.49 0.00 43.94 3.53
5514 7519 2.519771 TGGCAGCAGATTTCTGGAAT 57.480 45.000 9.49 0.00 43.94 3.01
5515 7520 2.372264 TGGCAGCAGATTTCTGGAATC 58.628 47.619 9.49 0.09 43.94 2.52
5516 7521 2.291089 TGGCAGCAGATTTCTGGAATCA 60.291 45.455 11.14 0.00 45.42 2.57
5517 7522 2.358267 GGCAGCAGATTTCTGGAATCAG 59.642 50.000 11.14 4.20 45.42 2.90
5527 7532 3.555527 TCTGGAATCAGATTCTGCTGG 57.444 47.619 20.41 8.40 44.39 4.85
5528 7533 2.172082 TCTGGAATCAGATTCTGCTGGG 59.828 50.000 20.41 7.01 44.39 4.45
5529 7534 1.918262 TGGAATCAGATTCTGCTGGGT 59.082 47.619 20.41 0.00 39.24 4.51
5530 7535 2.309755 TGGAATCAGATTCTGCTGGGTT 59.690 45.455 20.41 0.00 39.24 4.11
5531 7536 3.245371 TGGAATCAGATTCTGCTGGGTTT 60.245 43.478 20.41 0.00 39.24 3.27
5532 7537 3.129988 GGAATCAGATTCTGCTGGGTTTG 59.870 47.826 20.41 0.00 39.24 2.93
5533 7538 1.538047 TCAGATTCTGCTGGGTTTGC 58.462 50.000 8.89 0.00 36.55 3.68
5534 7539 0.529378 CAGATTCTGCTGGGTTTGCC 59.471 55.000 0.00 0.00 32.26 4.52
5545 7550 3.986970 GGTTTGCCCTTTGGTTCAG 57.013 52.632 0.00 0.00 0.00 3.02
5546 7551 1.408969 GGTTTGCCCTTTGGTTCAGA 58.591 50.000 0.00 0.00 0.00 3.27
5547 7552 1.970640 GGTTTGCCCTTTGGTTCAGAT 59.029 47.619 0.00 0.00 0.00 2.90
5548 7553 2.368548 GGTTTGCCCTTTGGTTCAGATT 59.631 45.455 0.00 0.00 0.00 2.40
5549 7554 3.554960 GGTTTGCCCTTTGGTTCAGATTC 60.555 47.826 0.00 0.00 0.00 2.52
5550 7555 2.978156 TGCCCTTTGGTTCAGATTCT 57.022 45.000 0.00 0.00 0.00 2.40
5551 7556 2.517959 TGCCCTTTGGTTCAGATTCTG 58.482 47.619 7.38 7.38 0.00 3.02
5552 7557 1.203287 GCCCTTTGGTTCAGATTCTGC 59.797 52.381 8.89 0.00 0.00 4.26
5553 7558 2.800250 CCCTTTGGTTCAGATTCTGCT 58.200 47.619 8.89 0.00 0.00 4.24
5554 7559 2.490903 CCCTTTGGTTCAGATTCTGCTG 59.509 50.000 8.89 0.00 37.24 4.41
5555 7560 2.094854 CCTTTGGTTCAGATTCTGCTGC 60.095 50.000 8.89 0.00 35.86 5.25
5556 7561 1.159285 TTGGTTCAGATTCTGCTGCG 58.841 50.000 8.89 0.00 35.86 5.18
5557 7562 1.300971 TGGTTCAGATTCTGCTGCGC 61.301 55.000 8.89 0.00 35.86 6.09
5558 7563 1.059994 GTTCAGATTCTGCTGCGCG 59.940 57.895 8.89 0.00 35.86 6.86
5559 7564 2.102438 TTCAGATTCTGCTGCGCGG 61.102 57.895 13.18 13.18 35.86 6.46
5560 7565 4.233635 CAGATTCTGCTGCGCGGC 62.234 66.667 34.00 34.00 34.49 6.53
5561 7566 4.765449 AGATTCTGCTGCGCGGCA 62.765 61.111 39.10 39.10 40.15 5.69
5582 7587 0.234884 CGGAATCCGGCGATAAAAGC 59.765 55.000 14.91 0.00 44.15 3.51
5583 7588 1.594331 GGAATCCGGCGATAAAAGCT 58.406 50.000 9.30 0.00 34.52 3.74
5584 7589 1.264288 GGAATCCGGCGATAAAAGCTG 59.736 52.381 9.30 0.00 40.49 4.24
5585 7590 2.210116 GAATCCGGCGATAAAAGCTGA 58.790 47.619 9.30 0.00 43.29 4.26
5586 7591 2.325583 ATCCGGCGATAAAAGCTGAA 57.674 45.000 9.30 0.00 43.29 3.02
5587 7592 1.365699 TCCGGCGATAAAAGCTGAAC 58.634 50.000 9.30 0.00 43.29 3.18
5588 7593 0.377203 CCGGCGATAAAAGCTGAACC 59.623 55.000 9.30 0.00 43.29 3.62
5589 7594 1.083489 CGGCGATAAAAGCTGAACCA 58.917 50.000 0.00 0.00 43.29 3.67
5590 7595 1.466950 CGGCGATAAAAGCTGAACCAA 59.533 47.619 0.00 0.00 43.29 3.67
5591 7596 2.095466 CGGCGATAAAAGCTGAACCAAA 60.095 45.455 0.00 0.00 43.29 3.28
5592 7597 3.242518 GGCGATAAAAGCTGAACCAAAC 58.757 45.455 0.00 0.00 34.52 2.93
5593 7598 3.305064 GGCGATAAAAGCTGAACCAAACA 60.305 43.478 0.00 0.00 34.52 2.83
5594 7599 3.914364 GCGATAAAAGCTGAACCAAACAG 59.086 43.478 0.00 0.00 38.27 3.16
5595 7600 4.475944 CGATAAAAGCTGAACCAAACAGG 58.524 43.478 0.00 0.00 45.67 4.00
5596 7601 4.615912 CGATAAAAGCTGAACCAAACAGGG 60.616 45.833 0.00 0.00 43.89 4.45
5597 7602 0.752658 AAAGCTGAACCAAACAGGGC 59.247 50.000 0.00 0.00 43.89 5.19
5598 7603 1.115326 AAGCTGAACCAAACAGGGCC 61.115 55.000 0.00 0.00 43.89 5.80
5599 7604 1.531602 GCTGAACCAAACAGGGCCT 60.532 57.895 0.00 0.00 43.89 5.19
5600 7605 0.251165 GCTGAACCAAACAGGGCCTA 60.251 55.000 5.28 0.00 43.89 3.93
5601 7606 1.616994 GCTGAACCAAACAGGGCCTAT 60.617 52.381 5.28 0.00 43.89 2.57
5618 7623 6.212791 AGGGCCTATATCTATCTTTAAACGCA 59.787 38.462 2.82 0.00 0.00 5.24
5736 7744 1.810151 GCTTCCGCAAAGATGTTACCA 59.190 47.619 0.17 0.00 37.12 3.25
5737 7745 2.423538 GCTTCCGCAAAGATGTTACCAT 59.576 45.455 0.17 0.00 37.12 3.55
5795 7814 3.817709 TGGAGCAGGGTTTTCTTTTTG 57.182 42.857 0.00 0.00 0.00 2.44
5796 7815 2.158971 TGGAGCAGGGTTTTCTTTTTGC 60.159 45.455 0.00 0.00 0.00 3.68
5798 7817 3.432186 GGAGCAGGGTTTTCTTTTTGCTT 60.432 43.478 0.00 0.00 41.52 3.91
5848 7869 7.182817 ACTCCTTGTTCTGTAATATAGTGCA 57.817 36.000 0.00 0.00 0.00 4.57
5849 7870 7.796054 ACTCCTTGTTCTGTAATATAGTGCAT 58.204 34.615 0.00 0.00 0.00 3.96
5850 7871 8.924303 ACTCCTTGTTCTGTAATATAGTGCATA 58.076 33.333 0.00 0.00 0.00 3.14
5851 7872 9.935241 CTCCTTGTTCTGTAATATAGTGCATAT 57.065 33.333 0.00 0.00 0.00 1.78
5918 7946 5.999205 ACATTTACATCCAGAATGCCAAA 57.001 34.783 0.00 0.00 39.12 3.28
5919 7947 5.723295 ACATTTACATCCAGAATGCCAAAC 58.277 37.500 0.00 0.00 39.12 2.93
5920 7948 5.245751 ACATTTACATCCAGAATGCCAAACA 59.754 36.000 0.00 0.00 39.12 2.83
5921 7949 4.782019 TTACATCCAGAATGCCAAACAC 57.218 40.909 0.00 0.00 39.12 3.32
5922 7950 2.596346 ACATCCAGAATGCCAAACACA 58.404 42.857 0.00 0.00 39.12 3.72
5923 7951 3.167485 ACATCCAGAATGCCAAACACAT 58.833 40.909 0.00 0.00 39.12 3.21
5993 8021 9.892130 AAATGGTTTTGTTTATAAACTTGGTCA 57.108 25.926 24.81 17.99 39.59 4.02
5994 8022 9.892130 AATGGTTTTGTTTATAAACTTGGTCAA 57.108 25.926 24.81 10.32 39.59 3.18
5995 8023 9.892130 ATGGTTTTGTTTATAAACTTGGTCAAA 57.108 25.926 24.81 14.79 39.59 2.69
5996 8024 9.892130 TGGTTTTGTTTATAAACTTGGTCAAAT 57.108 25.926 24.81 0.00 39.59 2.32
6002 8030 9.383519 TGTTTATAAACTTGGTCAAATTTTGCA 57.616 25.926 24.81 0.54 39.59 4.08
6006 8034 6.816134 AAACTTGGTCAAATTTTGCAAAGT 57.184 29.167 12.41 6.68 34.58 2.66
6007 8035 6.816134 AACTTGGTCAAATTTTGCAAAGTT 57.184 29.167 21.02 21.02 36.75 2.66
6008 8036 6.816134 ACTTGGTCAAATTTTGCAAAGTTT 57.184 29.167 22.59 22.59 31.44 2.66
6009 8037 6.610456 ACTTGGTCAAATTTTGCAAAGTTTG 58.390 32.000 35.84 35.84 43.05 2.93
6010 8038 6.429385 ACTTGGTCAAATTTTGCAAAGTTTGA 59.571 30.769 38.06 38.06 45.89 2.69
6050 8078 7.899178 TTATATGCACTACATTATGGAACGG 57.101 36.000 0.00 0.00 40.38 4.44
6051 8079 2.912771 TGCACTACATTATGGAACGGG 58.087 47.619 0.00 0.00 0.00 5.28
6052 8080 2.218603 GCACTACATTATGGAACGGGG 58.781 52.381 0.00 0.00 0.00 5.73
6053 8081 2.846193 CACTACATTATGGAACGGGGG 58.154 52.381 0.00 0.00 0.00 5.40
6082 8110 5.906073 CTTGAAAAGGAGAATTGTTGGTGT 58.094 37.500 0.00 0.00 41.27 4.16
6083 8111 5.514274 TGAAAAGGAGAATTGTTGGTGTC 57.486 39.130 0.00 0.00 0.00 3.67
6084 8112 4.952957 TGAAAAGGAGAATTGTTGGTGTCA 59.047 37.500 0.00 0.00 0.00 3.58
6085 8113 5.067674 TGAAAAGGAGAATTGTTGGTGTCAG 59.932 40.000 0.00 0.00 0.00 3.51
6086 8114 3.146104 AGGAGAATTGTTGGTGTCAGG 57.854 47.619 0.00 0.00 0.00 3.86
6087 8115 1.541588 GGAGAATTGTTGGTGTCAGGC 59.458 52.381 0.00 0.00 0.00 4.85
6088 8116 2.508526 GAGAATTGTTGGTGTCAGGCT 58.491 47.619 0.00 0.00 0.00 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
160 161 7.276218 CCTGTTTTATATGCTGGTGTTTTGATG 59.724 37.037 0.00 0.00 0.00 3.07
242 301 3.568007 TGTGGCACTCCATGTTTAGTTTC 59.432 43.478 19.83 0.00 45.62 2.78
308 1923 5.183228 CACGGTGGACTTCCTACATATTTT 58.817 41.667 0.00 0.00 36.82 1.82
353 1974 4.889995 GGACCTAGGAAGAATTGGGATTTG 59.110 45.833 17.98 0.00 0.00 2.32
496 2117 1.023513 CCTTCTCTTGGCTCTTGCGG 61.024 60.000 0.00 0.00 40.82 5.69
628 2249 1.521616 GGCAGCAAGAGGAGAGGAG 59.478 63.158 0.00 0.00 0.00 3.69
629 2250 2.354401 CGGCAGCAAGAGGAGAGGA 61.354 63.158 0.00 0.00 0.00 3.71
630 2251 2.186384 CGGCAGCAAGAGGAGAGG 59.814 66.667 0.00 0.00 0.00 3.69
631 2252 2.511145 GCGGCAGCAAGAGGAGAG 60.511 66.667 3.18 0.00 44.35 3.20
674 2296 6.347806 GGTTCGATTTCTCTTCTCAAAGGAAC 60.348 42.308 0.00 0.00 32.95 3.62
745 2370 2.155732 CACCGTCTGTCGTCTTTCAATG 59.844 50.000 0.00 0.00 37.94 2.82
802 2427 0.035458 CAACCCCACTCTCACTCACC 59.965 60.000 0.00 0.00 0.00 4.02
845 2470 1.639534 CCACACAACGACAACGGAC 59.360 57.895 0.00 0.00 44.46 4.79
883 2512 3.917760 GCCTCGCCTCGCCACTAT 61.918 66.667 0.00 0.00 0.00 2.12
970 2608 0.304705 GAAGCGCTCTCTCTCTCTCG 59.695 60.000 12.06 0.00 0.00 4.04
991 2641 1.134461 CAGAAGCTCCATCACCTCAGG 60.134 57.143 0.00 0.00 0.00 3.86
1022 2672 2.300437 CCTCCAAGAATCGGTAGGGATC 59.700 54.545 0.00 0.00 0.00 3.36
1055 2705 2.095364 GCAAGTGATGAAGCAAGTGGAG 60.095 50.000 0.00 0.00 0.00 3.86
1071 2721 3.055094 AGTGGAAGTATGAATCGGCAAGT 60.055 43.478 0.00 0.00 0.00 3.16
1085 2735 3.714144 AGTGGCATCTACTAGTGGAAGT 58.286 45.455 13.39 0.00 0.00 3.01
1217 2868 1.033746 TAGAGGTCAGGTTACCGCCG 61.034 60.000 0.00 0.00 44.77 6.46
1221 2872 6.919775 ATATGTCATAGAGGTCAGGTTACC 57.080 41.667 0.00 0.00 40.06 2.85
1238 2889 4.035675 GGCAGGCAGTTGTCTAAATATGTC 59.964 45.833 0.00 0.00 0.00 3.06
1277 2928 2.291741 CTGTCTGAGCAAAGGAAACACC 59.708 50.000 0.00 0.00 39.35 4.16
1451 3105 1.173913 GCAAACTATCCGGCAAAGGT 58.826 50.000 0.00 0.00 0.00 3.50
1499 3153 1.891933 TATGACCCATGGCAGGAGAA 58.108 50.000 6.09 0.00 0.00 2.87
1530 3184 3.008835 AGCAGCAAAGCATTGGAGATA 57.991 42.857 3.55 0.00 37.02 1.98
1607 3261 7.847711 TTCCCCTCAGTTTGATCAAAATTTA 57.152 32.000 22.07 10.68 31.33 1.40
1675 3329 3.426787 TTAGGAGCCCAATCGACAAAA 57.573 42.857 0.00 0.00 0.00 2.44
1723 3377 8.521176 AGCTCGACAGTAACTTATTCTCTTAAA 58.479 33.333 0.00 0.00 0.00 1.52
1912 3566 9.502091 GATGTGCTTCCTAAATACCATTATACA 57.498 33.333 0.00 0.00 0.00 2.29
2085 3740 9.063615 GTACAGAGAAATTTAAAAGACAAGGGA 57.936 33.333 0.00 0.00 0.00 4.20
2170 3826 7.992608 TCTATAGTCCATTTTTAGCATGCAAGA 59.007 33.333 21.98 1.57 0.00 3.02
2206 3868 8.218488 AGGGAGTATCTTTTTCTTTGTTACTGT 58.782 33.333 0.00 0.00 33.73 3.55
2207 3869 8.622948 AGGGAGTATCTTTTTCTTTGTTACTG 57.377 34.615 0.00 0.00 33.73 2.74
2208 3870 7.883833 GGAGGGAGTATCTTTTTCTTTGTTACT 59.116 37.037 0.00 0.00 33.73 2.24
2209 3871 7.664318 TGGAGGGAGTATCTTTTTCTTTGTTAC 59.336 37.037 0.00 0.00 33.73 2.50
2210 3872 7.751646 TGGAGGGAGTATCTTTTTCTTTGTTA 58.248 34.615 0.00 0.00 33.73 2.41
2211 3873 6.610830 TGGAGGGAGTATCTTTTTCTTTGTT 58.389 36.000 0.00 0.00 33.73 2.83
2235 3897 7.807977 AAATCAGCGACAACTAATATGGAAT 57.192 32.000 0.00 0.00 0.00 3.01
2259 3921 9.941664 GTTCTATATTAGTTGTCGCTTGTACTA 57.058 33.333 0.00 0.00 0.00 1.82
2261 3923 7.096722 CCGTTCTATATTAGTTGTCGCTTGTAC 60.097 40.741 0.00 0.00 0.00 2.90
2262 3924 6.914215 CCGTTCTATATTAGTTGTCGCTTGTA 59.086 38.462 0.00 0.00 0.00 2.41
2263 3925 5.747197 CCGTTCTATATTAGTTGTCGCTTGT 59.253 40.000 0.00 0.00 0.00 3.16
2264 3926 5.975344 TCCGTTCTATATTAGTTGTCGCTTG 59.025 40.000 0.00 0.00 0.00 4.01
2265 3927 6.140303 TCCGTTCTATATTAGTTGTCGCTT 57.860 37.500 0.00 0.00 0.00 4.68
2266 3928 5.278364 CCTCCGTTCTATATTAGTTGTCGCT 60.278 44.000 0.00 0.00 0.00 4.93
2267 3929 4.916249 CCTCCGTTCTATATTAGTTGTCGC 59.084 45.833 0.00 0.00 0.00 5.19
2268 3930 5.240183 TCCCTCCGTTCTATATTAGTTGTCG 59.760 44.000 0.00 0.00 0.00 4.35
2269 3931 6.264970 ACTCCCTCCGTTCTATATTAGTTGTC 59.735 42.308 0.00 0.00 0.00 3.18
2270 3932 6.134754 ACTCCCTCCGTTCTATATTAGTTGT 58.865 40.000 0.00 0.00 0.00 3.32
2271 3933 6.651975 ACTCCCTCCGTTCTATATTAGTTG 57.348 41.667 0.00 0.00 0.00 3.16
2272 3934 7.293073 TGTACTCCCTCCGTTCTATATTAGTT 58.707 38.462 0.00 0.00 0.00 2.24
2273 3935 6.845908 TGTACTCCCTCCGTTCTATATTAGT 58.154 40.000 0.00 0.00 0.00 2.24
2274 3936 7.756395 TTGTACTCCCTCCGTTCTATATTAG 57.244 40.000 0.00 0.00 0.00 1.73
2275 3937 8.716674 AATTGTACTCCCTCCGTTCTATATTA 57.283 34.615 0.00 0.00 0.00 0.98
2276 3938 7.613551 AATTGTACTCCCTCCGTTCTATATT 57.386 36.000 0.00 0.00 0.00 1.28
2277 3939 7.613551 AAATTGTACTCCCTCCGTTCTATAT 57.386 36.000 0.00 0.00 0.00 0.86
2278 3940 8.537728 TTAAATTGTACTCCCTCCGTTCTATA 57.462 34.615 0.00 0.00 0.00 1.31
2358 4020 6.834168 TCAGTGAGATGTGATACAGTACAA 57.166 37.500 0.00 0.00 0.00 2.41
2391 4053 7.757097 ATAGTTACAAGCTCATGTTAGAACG 57.243 36.000 0.00 0.00 34.75 3.95
2537 4204 4.032703 CCTGATGGCAATTACCTTTTCG 57.967 45.455 0.00 0.00 0.00 3.46
2557 4224 1.619983 ACGACAACAACAAAAACGCC 58.380 45.000 0.00 0.00 0.00 5.68
2861 4528 5.822519 TGAAACAGTAAAGTGCACAGAAGAT 59.177 36.000 21.04 0.00 0.00 2.40
2896 4563 4.409247 AGGTTTATAAGTACAGCCTCTGGG 59.591 45.833 0.00 0.00 35.51 4.45
2933 4631 7.872483 GGCAAGACCAAAATTTCTCTTGATTTA 59.128 33.333 24.12 0.00 41.42 1.40
3125 4825 6.040504 GGTTTGTCCTAATGTTCCTTTCAACT 59.959 38.462 0.00 0.00 0.00 3.16
3188 4888 8.682016 CATAAACGAAACTCTGTTCATTTCAAC 58.318 33.333 0.00 0.00 32.89 3.18
3314 5014 5.647658 TCATTCCCTTATTAACACTGCACAG 59.352 40.000 0.00 0.00 0.00 3.66
3366 5070 7.115378 GTCAAAGAATGCACAAACTATCTTTGG 59.885 37.037 19.85 7.34 46.83 3.28
3393 5097 7.130681 AGGAAAGTATGAAACTATCCTCCTG 57.869 40.000 0.00 0.00 37.50 3.86
3404 5108 5.947663 TCCTGGTCAAAGGAAAGTATGAAA 58.052 37.500 0.00 0.00 43.57 2.69
3431 5135 4.577283 CCGGGTCAAAGAAAACTAAGAACA 59.423 41.667 0.00 0.00 0.00 3.18
3561 5265 6.441088 AAGAACTATTCTCCTGGTCAAAGT 57.559 37.500 0.00 0.00 39.61 2.66
3586 5290 3.883631 TCCGCCGAGTTAAAAGAAAAC 57.116 42.857 0.00 0.00 0.00 2.43
3624 5329 8.532819 GGAGGGAGTACATAATATCAGTTAAGG 58.467 40.741 0.00 0.00 0.00 2.69
3668 5632 5.961263 CCCGTAATATAAGACGTGCAAAAAC 59.039 40.000 0.00 0.00 37.36 2.43
3669 5633 5.873712 TCCCGTAATATAAGACGTGCAAAAA 59.126 36.000 0.00 0.00 37.36 1.94
3670 5634 5.291614 GTCCCGTAATATAAGACGTGCAAAA 59.708 40.000 0.00 0.00 37.36 2.44
3671 5635 4.805192 GTCCCGTAATATAAGACGTGCAAA 59.195 41.667 0.00 0.00 37.36 3.68
3672 5636 4.362279 GTCCCGTAATATAAGACGTGCAA 58.638 43.478 0.00 0.00 37.36 4.08
3673 5637 3.548616 CGTCCCGTAATATAAGACGTGCA 60.549 47.826 0.00 0.00 43.89 4.57
3674 5638 2.975851 CGTCCCGTAATATAAGACGTGC 59.024 50.000 0.00 0.00 43.89 5.34
3675 5639 3.250762 TCCGTCCCGTAATATAAGACGTG 59.749 47.826 9.63 2.52 46.62 4.49
3676 5640 3.476552 TCCGTCCCGTAATATAAGACGT 58.523 45.455 9.63 0.00 46.62 4.34
3678 5642 3.192212 CCCTCCGTCCCGTAATATAAGAC 59.808 52.174 0.00 0.00 0.00 3.01
3679 5643 3.074390 TCCCTCCGTCCCGTAATATAAGA 59.926 47.826 0.00 0.00 0.00 2.10
3680 5644 3.424703 TCCCTCCGTCCCGTAATATAAG 58.575 50.000 0.00 0.00 0.00 1.73
3681 5645 3.181429 ACTCCCTCCGTCCCGTAATATAA 60.181 47.826 0.00 0.00 0.00 0.98
3682 5646 2.376518 ACTCCCTCCGTCCCGTAATATA 59.623 50.000 0.00 0.00 0.00 0.86
3683 5647 1.146566 ACTCCCTCCGTCCCGTAATAT 59.853 52.381 0.00 0.00 0.00 1.28
3684 5648 0.552848 ACTCCCTCCGTCCCGTAATA 59.447 55.000 0.00 0.00 0.00 0.98
3685 5649 0.552848 TACTCCCTCCGTCCCGTAAT 59.447 55.000 0.00 0.00 0.00 1.89
3686 5650 0.394352 GTACTCCCTCCGTCCCGTAA 60.394 60.000 0.00 0.00 0.00 3.18
3687 5651 1.224592 GTACTCCCTCCGTCCCGTA 59.775 63.158 0.00 0.00 0.00 4.02
3688 5652 2.044551 GTACTCCCTCCGTCCCGT 60.045 66.667 0.00 0.00 0.00 5.28
3689 5653 1.041447 ATTGTACTCCCTCCGTCCCG 61.041 60.000 0.00 0.00 0.00 5.14
3690 5654 1.134491 CAATTGTACTCCCTCCGTCCC 60.134 57.143 0.00 0.00 0.00 4.46
3691 5655 1.553704 ACAATTGTACTCCCTCCGTCC 59.446 52.381 9.97 0.00 0.00 4.79
3918 5909 6.758254 AGGAAAACATACAACATTTCTTGGG 58.242 36.000 0.00 0.00 33.42 4.12
3950 5941 1.031571 TTAGGCCCAGCTTTGATGCG 61.032 55.000 0.00 0.00 38.13 4.73
4083 6074 3.376234 ACTCGCTTCAATCCATGTTGATG 59.624 43.478 0.06 4.19 37.88 3.07
4084 6075 3.614092 ACTCGCTTCAATCCATGTTGAT 58.386 40.909 0.06 0.00 37.88 2.57
4147 6138 4.129380 TGGATCGTCATAAAAGGCATCAG 58.871 43.478 0.00 0.00 0.00 2.90
4208 6199 4.807834 CAGCAGTGAGTATGTAAGGTGATG 59.192 45.833 0.00 0.00 0.00 3.07
4272 6263 5.823045 GCTTCCTAGCTACATACACCAAATT 59.177 40.000 0.00 0.00 44.27 1.82
4320 6311 1.683011 CCACTGCCCTGACCAATTAGG 60.683 57.143 0.00 0.00 45.67 2.69
4356 6347 3.762247 CCGGGCAATGGCAGGTTG 61.762 66.667 17.19 0.00 43.71 3.77
4674 6665 3.533691 GTGCGCGTCGTAGCTGAC 61.534 66.667 8.43 0.00 35.49 3.51
4895 6886 0.105224 ACAACATTGTCGGGTCGTCA 59.895 50.000 0.00 0.00 36.50 4.35
4905 6896 2.236146 TCGGCTCCTCATACAACATTGT 59.764 45.455 2.32 2.32 44.86 2.71
4949 6940 2.027745 GTGAAGATGCCTGACCTTCTCA 60.028 50.000 0.00 0.00 37.69 3.27
5139 7130 3.181440 TGTGCAGGATCCCTAATGAATCC 60.181 47.826 8.55 0.00 29.64 3.01
5144 7135 2.715749 TGTGTGCAGGATCCCTAATG 57.284 50.000 8.55 0.54 29.64 1.90
5157 7148 4.006989 TGACCCAGTTGTATTATGTGTGC 58.993 43.478 0.00 0.00 0.00 4.57
5198 7201 6.402658 CCACAATAAATACATACACACACGCA 60.403 38.462 0.00 0.00 0.00 5.24
5200 7203 7.297229 TCCACAATAAATACATACACACACG 57.703 36.000 0.00 0.00 0.00 4.49
5202 7205 9.625747 ATGATCCACAATAAATACATACACACA 57.374 29.630 0.00 0.00 0.00 3.72
5294 7299 3.680786 GCCGAACCAAACAGGGCC 61.681 66.667 0.00 0.00 43.89 5.80
5295 7300 2.597510 AGCCGAACCAAACAGGGC 60.598 61.111 0.00 0.00 43.89 5.19
5296 7301 1.528309 ACAGCCGAACCAAACAGGG 60.528 57.895 0.00 0.00 43.89 4.45
5297 7302 1.654220 CACAGCCGAACCAAACAGG 59.346 57.895 0.00 0.00 45.67 4.00
5298 7303 0.817634 TCCACAGCCGAACCAAACAG 60.818 55.000 0.00 0.00 0.00 3.16
5299 7304 0.179004 ATCCACAGCCGAACCAAACA 60.179 50.000 0.00 0.00 0.00 2.83
5300 7305 0.958822 AATCCACAGCCGAACCAAAC 59.041 50.000 0.00 0.00 0.00 2.93
5301 7306 1.611491 GAAATCCACAGCCGAACCAAA 59.389 47.619 0.00 0.00 0.00 3.28
5302 7307 1.202879 AGAAATCCACAGCCGAACCAA 60.203 47.619 0.00 0.00 0.00 3.67
5303 7308 0.400213 AGAAATCCACAGCCGAACCA 59.600 50.000 0.00 0.00 0.00 3.67
5304 7309 2.396590 TAGAAATCCACAGCCGAACC 57.603 50.000 0.00 0.00 0.00 3.62
5305 7310 4.215613 ACTTTTAGAAATCCACAGCCGAAC 59.784 41.667 0.00 0.00 0.00 3.95
5306 7311 4.394729 ACTTTTAGAAATCCACAGCCGAA 58.605 39.130 0.00 0.00 0.00 4.30
5307 7312 4.015872 ACTTTTAGAAATCCACAGCCGA 57.984 40.909 0.00 0.00 0.00 5.54
5308 7313 4.201822 GCTACTTTTAGAAATCCACAGCCG 60.202 45.833 0.00 0.00 0.00 5.52
5309 7314 4.944317 AGCTACTTTTAGAAATCCACAGCC 59.056 41.667 0.00 0.00 0.00 4.85
5310 7315 5.412904 ACAGCTACTTTTAGAAATCCACAGC 59.587 40.000 0.00 0.00 0.00 4.40
5311 7316 6.650807 TCACAGCTACTTTTAGAAATCCACAG 59.349 38.462 0.00 0.00 0.00 3.66
5312 7317 6.530120 TCACAGCTACTTTTAGAAATCCACA 58.470 36.000 0.00 0.00 0.00 4.17
5313 7318 7.435068 TTCACAGCTACTTTTAGAAATCCAC 57.565 36.000 0.00 0.00 0.00 4.02
5314 7319 8.458573 TTTTCACAGCTACTTTTAGAAATCCA 57.541 30.769 0.00 0.00 0.00 3.41
5315 7320 9.914131 ATTTTTCACAGCTACTTTTAGAAATCC 57.086 29.630 0.00 0.00 0.00 3.01
5318 7323 9.950680 CAGATTTTTCACAGCTACTTTTAGAAA 57.049 29.630 0.00 0.00 0.00 2.52
5319 7324 8.076178 GCAGATTTTTCACAGCTACTTTTAGAA 58.924 33.333 0.00 0.00 0.00 2.10
5320 7325 7.445402 AGCAGATTTTTCACAGCTACTTTTAGA 59.555 33.333 0.00 0.00 0.00 2.10
5321 7326 7.536622 CAGCAGATTTTTCACAGCTACTTTTAG 59.463 37.037 0.00 0.00 0.00 1.85
5322 7327 7.013274 ACAGCAGATTTTTCACAGCTACTTTTA 59.987 33.333 0.00 0.00 0.00 1.52
5323 7328 6.183360 ACAGCAGATTTTTCACAGCTACTTTT 60.183 34.615 0.00 0.00 0.00 2.27
5324 7329 5.300286 ACAGCAGATTTTTCACAGCTACTTT 59.700 36.000 0.00 0.00 0.00 2.66
5325 7330 4.823989 ACAGCAGATTTTTCACAGCTACTT 59.176 37.500 0.00 0.00 0.00 2.24
5326 7331 4.214971 CACAGCAGATTTTTCACAGCTACT 59.785 41.667 0.00 0.00 0.00 2.57
5327 7332 4.214119 TCACAGCAGATTTTTCACAGCTAC 59.786 41.667 0.00 0.00 0.00 3.58
5328 7333 4.388485 TCACAGCAGATTTTTCACAGCTA 58.612 39.130 0.00 0.00 0.00 3.32
5329 7334 3.216800 TCACAGCAGATTTTTCACAGCT 58.783 40.909 0.00 0.00 0.00 4.24
5330 7335 3.631145 TCACAGCAGATTTTTCACAGC 57.369 42.857 0.00 0.00 0.00 4.40
5331 7336 6.890663 TTTTTCACAGCAGATTTTTCACAG 57.109 33.333 0.00 0.00 0.00 3.66
5351 7356 8.667463 CAAATCAGATTTTCCACAACTGTTTTT 58.333 29.630 5.58 0.00 32.16 1.94
5352 7357 8.040132 TCAAATCAGATTTTCCACAACTGTTTT 58.960 29.630 5.58 0.00 33.64 2.43
5353 7358 7.555087 TCAAATCAGATTTTCCACAACTGTTT 58.445 30.769 5.58 0.00 0.00 2.83
5354 7359 7.111247 TCAAATCAGATTTTCCACAACTGTT 57.889 32.000 5.58 0.00 0.00 3.16
5355 7360 6.713762 TCAAATCAGATTTTCCACAACTGT 57.286 33.333 5.58 0.00 0.00 3.55
5356 7361 8.422973 TTTTCAAATCAGATTTTCCACAACTG 57.577 30.769 5.58 0.00 0.00 3.16
5357 7362 9.101655 CTTTTTCAAATCAGATTTTCCACAACT 57.898 29.630 5.58 0.00 0.00 3.16
5358 7363 9.097257 TCTTTTTCAAATCAGATTTTCCACAAC 57.903 29.630 5.58 0.00 0.00 3.32
5359 7364 9.835389 ATCTTTTTCAAATCAGATTTTCCACAA 57.165 25.926 5.58 0.00 0.00 3.33
5360 7365 9.263538 CATCTTTTTCAAATCAGATTTTCCACA 57.736 29.630 5.58 0.00 0.00 4.17
5361 7366 9.264719 ACATCTTTTTCAAATCAGATTTTCCAC 57.735 29.630 5.58 0.00 0.00 4.02
5367 7372 9.300681 TGACCTACATCTTTTTCAAATCAGATT 57.699 29.630 0.00 0.00 0.00 2.40
5368 7373 8.868522 TGACCTACATCTTTTTCAAATCAGAT 57.131 30.769 0.00 0.00 0.00 2.90
5369 7374 8.868522 ATGACCTACATCTTTTTCAAATCAGA 57.131 30.769 0.00 0.00 33.46 3.27
5370 7375 9.918630 AAATGACCTACATCTTTTTCAAATCAG 57.081 29.630 0.00 0.00 38.38 2.90
5371 7376 9.695526 CAAATGACCTACATCTTTTTCAAATCA 57.304 29.630 0.00 0.00 38.38 2.57
5372 7377 9.143631 CCAAATGACCTACATCTTTTTCAAATC 57.856 33.333 0.00 0.00 38.38 2.17
5373 7378 7.603784 GCCAAATGACCTACATCTTTTTCAAAT 59.396 33.333 0.00 0.00 38.38 2.32
5374 7379 6.928492 GCCAAATGACCTACATCTTTTTCAAA 59.072 34.615 0.00 0.00 38.38 2.69
5375 7380 6.041409 TGCCAAATGACCTACATCTTTTTCAA 59.959 34.615 0.00 0.00 38.38 2.69
5376 7381 5.538053 TGCCAAATGACCTACATCTTTTTCA 59.462 36.000 0.00 0.00 38.38 2.69
5377 7382 6.024552 TGCCAAATGACCTACATCTTTTTC 57.975 37.500 0.00 0.00 38.38 2.29
5378 7383 6.418057 TTGCCAAATGACCTACATCTTTTT 57.582 33.333 0.00 0.00 38.38 1.94
5379 7384 6.223120 GTTTGCCAAATGACCTACATCTTTT 58.777 36.000 0.00 0.00 38.38 2.27
5380 7385 5.279456 GGTTTGCCAAATGACCTACATCTTT 60.279 40.000 0.00 0.00 34.76 2.52
5381 7386 4.220602 GGTTTGCCAAATGACCTACATCTT 59.779 41.667 0.00 0.00 34.76 2.40
5382 7387 3.763897 GGTTTGCCAAATGACCTACATCT 59.236 43.478 0.00 0.00 34.76 2.90
5383 7388 3.509575 TGGTTTGCCAAATGACCTACATC 59.490 43.478 0.00 0.00 42.83 3.06
5384 7389 3.505386 TGGTTTGCCAAATGACCTACAT 58.495 40.909 0.00 0.00 42.83 2.29
5385 7390 2.890311 CTGGTTTGCCAAATGACCTACA 59.110 45.455 0.00 0.00 45.51 2.74
5386 7391 2.352715 GCTGGTTTGCCAAATGACCTAC 60.353 50.000 0.00 0.00 45.51 3.18
5387 7392 1.892474 GCTGGTTTGCCAAATGACCTA 59.108 47.619 0.00 0.00 45.51 3.08
5388 7393 0.681175 GCTGGTTTGCCAAATGACCT 59.319 50.000 0.00 0.00 45.51 3.85
5389 7394 0.681175 AGCTGGTTTGCCAAATGACC 59.319 50.000 0.00 0.00 45.51 4.02
5390 7395 1.340889 TCAGCTGGTTTGCCAAATGAC 59.659 47.619 15.13 0.00 45.51 3.06
5391 7396 1.702182 TCAGCTGGTTTGCCAAATGA 58.298 45.000 15.13 0.00 45.51 2.57
5392 7397 2.754946 ATCAGCTGGTTTGCCAAATG 57.245 45.000 15.13 0.00 45.51 2.32
5393 7398 3.164268 TGTATCAGCTGGTTTGCCAAAT 58.836 40.909 15.13 0.00 45.51 2.32
5394 7399 2.591923 TGTATCAGCTGGTTTGCCAAA 58.408 42.857 15.13 0.00 45.51 3.28
5395 7400 2.284754 TGTATCAGCTGGTTTGCCAA 57.715 45.000 15.13 0.00 45.51 4.52
5396 7401 1.885887 GTTGTATCAGCTGGTTTGCCA 59.114 47.619 15.13 0.00 43.73 4.92
5397 7402 1.202348 GGTTGTATCAGCTGGTTTGCC 59.798 52.381 15.13 6.15 0.00 4.52
5398 7403 2.162681 AGGTTGTATCAGCTGGTTTGC 58.837 47.619 15.13 3.72 0.00 3.68
5399 7404 4.853924 AAAGGTTGTATCAGCTGGTTTG 57.146 40.909 15.13 0.00 0.00 2.93
5400 7405 4.892934 TGAAAAGGTTGTATCAGCTGGTTT 59.107 37.500 15.13 1.77 0.00 3.27
5401 7406 4.469657 TGAAAAGGTTGTATCAGCTGGTT 58.530 39.130 15.13 4.51 0.00 3.67
5402 7407 4.074970 CTGAAAAGGTTGTATCAGCTGGT 58.925 43.478 15.13 9.93 33.60 4.00
5403 7408 4.326826 TCTGAAAAGGTTGTATCAGCTGG 58.673 43.478 15.13 0.00 39.27 4.85
5404 7409 6.506500 AATCTGAAAAGGTTGTATCAGCTG 57.493 37.500 7.63 7.63 39.27 4.24
5405 7410 7.373493 CAAAATCTGAAAAGGTTGTATCAGCT 58.627 34.615 0.00 0.00 39.27 4.24
5406 7411 6.587608 CCAAAATCTGAAAAGGTTGTATCAGC 59.412 38.462 0.00 0.00 39.27 4.26
5407 7412 6.587608 GCCAAAATCTGAAAAGGTTGTATCAG 59.412 38.462 0.00 0.00 40.46 2.90
5408 7413 6.454795 GCCAAAATCTGAAAAGGTTGTATCA 58.545 36.000 0.00 0.00 0.00 2.15
5409 7414 5.869344 GGCCAAAATCTGAAAAGGTTGTATC 59.131 40.000 0.00 0.00 0.00 2.24
5410 7415 5.279960 GGGCCAAAATCTGAAAAGGTTGTAT 60.280 40.000 4.39 0.00 0.00 2.29
5411 7416 4.039852 GGGCCAAAATCTGAAAAGGTTGTA 59.960 41.667 4.39 0.00 0.00 2.41
5412 7417 3.181455 GGGCCAAAATCTGAAAAGGTTGT 60.181 43.478 4.39 0.00 0.00 3.32
5413 7418 3.402110 GGGCCAAAATCTGAAAAGGTTG 58.598 45.455 4.39 0.00 0.00 3.77
5414 7419 2.037121 CGGGCCAAAATCTGAAAAGGTT 59.963 45.455 4.39 0.00 0.00 3.50
5415 7420 1.618343 CGGGCCAAAATCTGAAAAGGT 59.382 47.619 4.39 0.00 0.00 3.50
5416 7421 1.672737 GCGGGCCAAAATCTGAAAAGG 60.673 52.381 4.39 0.00 0.00 3.11
5417 7422 1.000731 TGCGGGCCAAAATCTGAAAAG 59.999 47.619 4.39 0.00 0.00 2.27
5418 7423 1.000731 CTGCGGGCCAAAATCTGAAAA 59.999 47.619 4.39 0.00 0.00 2.29
5419 7424 0.602562 CTGCGGGCCAAAATCTGAAA 59.397 50.000 4.39 0.00 0.00 2.69
5420 7425 1.876497 GCTGCGGGCCAAAATCTGAA 61.876 55.000 4.39 0.00 34.27 3.02
5421 7426 2.342650 GCTGCGGGCCAAAATCTGA 61.343 57.895 4.39 0.00 34.27 3.27
5422 7427 2.182537 GCTGCGGGCCAAAATCTG 59.817 61.111 4.39 0.00 34.27 2.90
5423 7428 3.443045 CGCTGCGGGCCAAAATCT 61.443 61.111 15.40 0.00 37.74 2.40
5424 7429 4.496927 CCGCTGCGGGCCAAAATC 62.497 66.667 32.37 0.00 44.15 2.17
5434 7439 1.532505 CCAAAATCTGATTCCGCTGCG 60.533 52.381 16.34 16.34 0.00 5.18
5435 7440 1.745087 TCCAAAATCTGATTCCGCTGC 59.255 47.619 2.92 0.00 0.00 5.25
5436 7441 4.418392 CTTTCCAAAATCTGATTCCGCTG 58.582 43.478 2.92 0.03 0.00 5.18
5437 7442 3.119352 GCTTTCCAAAATCTGATTCCGCT 60.119 43.478 2.92 0.00 0.00 5.52
5438 7443 3.182182 GCTTTCCAAAATCTGATTCCGC 58.818 45.455 2.92 0.00 0.00 5.54
5439 7444 4.168760 GTGCTTTCCAAAATCTGATTCCG 58.831 43.478 2.92 0.00 0.00 4.30
5440 7445 4.168760 CGTGCTTTCCAAAATCTGATTCC 58.831 43.478 2.92 0.00 0.00 3.01
5441 7446 4.798574 ACGTGCTTTCCAAAATCTGATTC 58.201 39.130 2.92 0.00 0.00 2.52
5442 7447 4.321230 GGACGTGCTTTCCAAAATCTGATT 60.321 41.667 0.00 0.00 32.82 2.57
5443 7448 3.191371 GGACGTGCTTTCCAAAATCTGAT 59.809 43.478 0.00 0.00 32.82 2.90
5444 7449 2.552315 GGACGTGCTTTCCAAAATCTGA 59.448 45.455 0.00 0.00 32.82 3.27
5445 7450 2.554032 AGGACGTGCTTTCCAAAATCTG 59.446 45.455 2.68 0.00 35.33 2.90
5446 7451 2.554032 CAGGACGTGCTTTCCAAAATCT 59.446 45.455 6.93 0.00 35.33 2.40
5447 7452 2.351738 CCAGGACGTGCTTTCCAAAATC 60.352 50.000 6.93 0.00 35.33 2.17
5448 7453 1.613437 CCAGGACGTGCTTTCCAAAAT 59.387 47.619 6.93 0.00 35.33 1.82
5449 7454 1.028905 CCAGGACGTGCTTTCCAAAA 58.971 50.000 6.93 0.00 35.33 2.44
5450 7455 0.821711 CCCAGGACGTGCTTTCCAAA 60.822 55.000 6.93 0.00 35.33 3.28
5451 7456 1.228124 CCCAGGACGTGCTTTCCAA 60.228 57.895 6.93 0.00 35.33 3.53
5452 7457 2.429930 CCCAGGACGTGCTTTCCA 59.570 61.111 6.93 0.00 35.33 3.53
5453 7458 3.056328 GCCCAGGACGTGCTTTCC 61.056 66.667 6.93 0.00 0.00 3.13
5454 7459 2.032681 AGCCCAGGACGTGCTTTC 59.967 61.111 6.93 0.00 29.17 2.62
5455 7460 2.281761 CAGCCCAGGACGTGCTTT 60.282 61.111 6.93 0.00 31.77 3.51
5459 7464 2.743928 GAAGCAGCCCAGGACGTG 60.744 66.667 0.00 0.00 0.00 4.49
5460 7465 4.021925 GGAAGCAGCCCAGGACGT 62.022 66.667 0.00 0.00 0.00 4.34
5462 7467 3.553095 AACGGAAGCAGCCCAGGAC 62.553 63.158 0.00 0.00 0.00 3.85
5463 7468 2.351924 AAAACGGAAGCAGCCCAGGA 62.352 55.000 0.00 0.00 0.00 3.86
5464 7469 1.463553 AAAAACGGAAGCAGCCCAGG 61.464 55.000 0.00 0.00 0.00 4.45
5465 7470 0.318955 CAAAAACGGAAGCAGCCCAG 60.319 55.000 0.00 0.00 0.00 4.45
5466 7471 1.739049 CAAAAACGGAAGCAGCCCA 59.261 52.632 0.00 0.00 0.00 5.36
5467 7472 1.006220 CCAAAAACGGAAGCAGCCC 60.006 57.895 0.00 0.00 0.00 5.19
5468 7473 0.104120 AACCAAAAACGGAAGCAGCC 59.896 50.000 0.00 0.00 0.00 4.85
5469 7474 1.202359 TGAACCAAAAACGGAAGCAGC 60.202 47.619 0.00 0.00 0.00 5.25
5470 7475 2.357637 TCTGAACCAAAAACGGAAGCAG 59.642 45.455 0.00 0.00 0.00 4.24
5471 7476 2.370349 TCTGAACCAAAAACGGAAGCA 58.630 42.857 0.00 0.00 0.00 3.91
5472 7477 3.643159 ATCTGAACCAAAAACGGAAGC 57.357 42.857 0.00 0.00 0.00 3.86
5473 7478 5.234116 CCAAAATCTGAACCAAAAACGGAAG 59.766 40.000 0.00 0.00 0.00 3.46
5474 7479 5.112686 CCAAAATCTGAACCAAAAACGGAA 58.887 37.500 0.00 0.00 0.00 4.30
5475 7480 4.688021 CCAAAATCTGAACCAAAAACGGA 58.312 39.130 0.00 0.00 0.00 4.69
5476 7481 3.247411 GCCAAAATCTGAACCAAAAACGG 59.753 43.478 0.00 0.00 0.00 4.44
5477 7482 3.868077 TGCCAAAATCTGAACCAAAAACG 59.132 39.130 0.00 0.00 0.00 3.60
5478 7483 4.260743 GCTGCCAAAATCTGAACCAAAAAC 60.261 41.667 0.00 0.00 0.00 2.43
5479 7484 3.876320 GCTGCCAAAATCTGAACCAAAAA 59.124 39.130 0.00 0.00 0.00 1.94
5480 7485 3.118482 TGCTGCCAAAATCTGAACCAAAA 60.118 39.130 0.00 0.00 0.00 2.44
5481 7486 2.433604 TGCTGCCAAAATCTGAACCAAA 59.566 40.909 0.00 0.00 0.00 3.28
5482 7487 2.036217 CTGCTGCCAAAATCTGAACCAA 59.964 45.455 0.00 0.00 0.00 3.67
5483 7488 1.614903 CTGCTGCCAAAATCTGAACCA 59.385 47.619 0.00 0.00 0.00 3.67
5484 7489 1.888512 TCTGCTGCCAAAATCTGAACC 59.111 47.619 0.00 0.00 0.00 3.62
5485 7490 3.863142 ATCTGCTGCCAAAATCTGAAC 57.137 42.857 0.00 0.00 0.00 3.18
5486 7491 4.525487 AGAAATCTGCTGCCAAAATCTGAA 59.475 37.500 0.00 0.00 0.00 3.02
5487 7492 4.082408 CAGAAATCTGCTGCCAAAATCTGA 60.082 41.667 13.28 0.00 37.15 3.27
5488 7493 4.174009 CAGAAATCTGCTGCCAAAATCTG 58.826 43.478 0.00 2.49 37.15 2.90
5489 7494 3.194968 CCAGAAATCTGCTGCCAAAATCT 59.805 43.478 4.87 0.00 42.47 2.40
5490 7495 3.194116 TCCAGAAATCTGCTGCCAAAATC 59.806 43.478 4.87 0.00 42.47 2.17
5491 7496 3.167485 TCCAGAAATCTGCTGCCAAAAT 58.833 40.909 4.87 0.00 42.47 1.82
5492 7497 2.596346 TCCAGAAATCTGCTGCCAAAA 58.404 42.857 4.87 0.00 42.47 2.44
5493 7498 2.291209 TCCAGAAATCTGCTGCCAAA 57.709 45.000 4.87 0.00 42.47 3.28
5494 7499 2.291209 TTCCAGAAATCTGCTGCCAA 57.709 45.000 4.87 0.00 42.47 4.52
5495 7500 2.291089 TGATTCCAGAAATCTGCTGCCA 60.291 45.455 4.87 0.00 43.61 4.92
5496 7501 2.358267 CTGATTCCAGAAATCTGCTGCC 59.642 50.000 4.87 0.00 43.61 4.85
5497 7502 3.276857 TCTGATTCCAGAAATCTGCTGC 58.723 45.455 4.87 0.00 45.74 5.25
5508 7513 2.092538 ACCCAGCAGAATCTGATTCCAG 60.093 50.000 23.12 17.76 40.13 3.86
5509 7514 1.918262 ACCCAGCAGAATCTGATTCCA 59.082 47.619 23.12 0.00 40.13 3.53
5510 7515 2.725221 ACCCAGCAGAATCTGATTCC 57.275 50.000 23.12 11.51 40.13 3.01
5511 7516 3.428589 GCAAACCCAGCAGAATCTGATTC 60.429 47.826 20.14 20.14 39.56 2.52
5512 7517 2.494870 GCAAACCCAGCAGAATCTGATT 59.505 45.455 15.38 1.81 36.19 2.57
5513 7518 2.097825 GCAAACCCAGCAGAATCTGAT 58.902 47.619 15.38 4.38 36.19 2.90
5514 7519 1.538047 GCAAACCCAGCAGAATCTGA 58.462 50.000 15.38 0.00 36.19 3.27
5515 7520 0.529378 GGCAAACCCAGCAGAATCTG 59.471 55.000 5.78 5.78 34.12 2.90
5516 7521 2.967270 GGCAAACCCAGCAGAATCT 58.033 52.632 0.00 0.00 0.00 2.40
5527 7532 1.408969 TCTGAACCAAAGGGCAAACC 58.591 50.000 0.00 0.00 37.90 3.27
5528 7533 3.321968 AGAATCTGAACCAAAGGGCAAAC 59.678 43.478 0.00 0.00 37.90 2.93
5529 7534 3.321682 CAGAATCTGAACCAAAGGGCAAA 59.678 43.478 3.77 0.00 33.00 3.68
5530 7535 2.892852 CAGAATCTGAACCAAAGGGCAA 59.107 45.455 3.77 0.00 33.00 4.52
5531 7536 2.517959 CAGAATCTGAACCAAAGGGCA 58.482 47.619 3.77 0.00 33.00 5.36
5532 7537 1.203287 GCAGAATCTGAACCAAAGGGC 59.797 52.381 15.38 0.00 33.00 5.19
5533 7538 2.490903 CAGCAGAATCTGAACCAAAGGG 59.509 50.000 15.38 0.00 36.19 3.95
5534 7539 2.094854 GCAGCAGAATCTGAACCAAAGG 60.095 50.000 15.38 0.00 36.19 3.11
5535 7540 2.413765 CGCAGCAGAATCTGAACCAAAG 60.414 50.000 15.38 0.00 36.19 2.77
5536 7541 1.536766 CGCAGCAGAATCTGAACCAAA 59.463 47.619 15.38 0.00 36.19 3.28
5537 7542 1.159285 CGCAGCAGAATCTGAACCAA 58.841 50.000 15.38 0.00 36.19 3.67
5538 7543 2.845019 CGCAGCAGAATCTGAACCA 58.155 52.632 15.38 0.00 36.19 3.67
5559 7564 3.858868 TATCGCCGGATTCCGCTGC 62.859 63.158 19.80 16.64 46.86 5.25
5560 7565 0.878523 TTTATCGCCGGATTCCGCTG 60.879 55.000 19.80 13.29 46.86 5.18
5561 7566 0.179067 TTTTATCGCCGGATTCCGCT 60.179 50.000 19.80 6.30 46.86 5.52
5562 7567 0.234884 CTTTTATCGCCGGATTCCGC 59.765 55.000 19.80 13.54 46.86 5.54
5564 7569 1.264288 CAGCTTTTATCGCCGGATTCC 59.736 52.381 5.05 0.00 34.00 3.01
5565 7570 2.210116 TCAGCTTTTATCGCCGGATTC 58.790 47.619 5.05 0.00 34.00 2.52
5566 7571 2.325583 TCAGCTTTTATCGCCGGATT 57.674 45.000 5.05 0.00 34.00 3.01
5567 7572 1.940613 GTTCAGCTTTTATCGCCGGAT 59.059 47.619 5.05 0.00 36.65 4.18
5568 7573 1.365699 GTTCAGCTTTTATCGCCGGA 58.634 50.000 5.05 0.00 0.00 5.14
5569 7574 0.377203 GGTTCAGCTTTTATCGCCGG 59.623 55.000 0.00 0.00 0.00 6.13
5570 7575 1.083489 TGGTTCAGCTTTTATCGCCG 58.917 50.000 0.00 0.00 0.00 6.46
5571 7576 3.242518 GTTTGGTTCAGCTTTTATCGCC 58.757 45.455 0.00 0.00 0.00 5.54
5572 7577 3.896122 TGTTTGGTTCAGCTTTTATCGC 58.104 40.909 0.00 0.00 0.00 4.58
5573 7578 4.475944 CCTGTTTGGTTCAGCTTTTATCG 58.524 43.478 0.00 0.00 0.00 2.92
5574 7579 4.809673 CCCTGTTTGGTTCAGCTTTTATC 58.190 43.478 0.00 0.00 0.00 1.75
5575 7580 3.006859 GCCCTGTTTGGTTCAGCTTTTAT 59.993 43.478 0.00 0.00 0.00 1.40
5576 7581 2.364002 GCCCTGTTTGGTTCAGCTTTTA 59.636 45.455 0.00 0.00 0.00 1.52
5577 7582 1.138859 GCCCTGTTTGGTTCAGCTTTT 59.861 47.619 0.00 0.00 0.00 2.27
5578 7583 0.752658 GCCCTGTTTGGTTCAGCTTT 59.247 50.000 0.00 0.00 0.00 3.51
5579 7584 1.115326 GGCCCTGTTTGGTTCAGCTT 61.115 55.000 0.00 0.00 0.00 3.74
5580 7585 1.531602 GGCCCTGTTTGGTTCAGCT 60.532 57.895 0.00 0.00 0.00 4.24
5581 7586 0.251165 TAGGCCCTGTTTGGTTCAGC 60.251 55.000 0.00 0.00 0.00 4.26
5582 7587 2.514458 ATAGGCCCTGTTTGGTTCAG 57.486 50.000 0.00 0.00 0.00 3.02
5583 7588 3.785887 AGATATAGGCCCTGTTTGGTTCA 59.214 43.478 0.00 0.00 0.00 3.18
5584 7589 4.439253 AGATATAGGCCCTGTTTGGTTC 57.561 45.455 0.00 0.00 0.00 3.62
5585 7590 5.852250 AGATAGATATAGGCCCTGTTTGGTT 59.148 40.000 0.00 0.00 0.00 3.67
5586 7591 5.415961 AGATAGATATAGGCCCTGTTTGGT 58.584 41.667 0.00 0.00 0.00 3.67
5587 7592 6.380079 AAGATAGATATAGGCCCTGTTTGG 57.620 41.667 0.00 0.00 0.00 3.28
5588 7593 9.793259 TTTAAAGATAGATATAGGCCCTGTTTG 57.207 33.333 0.00 0.00 0.00 2.93
5589 7594 9.794719 GTTTAAAGATAGATATAGGCCCTGTTT 57.205 33.333 0.00 0.00 0.00 2.83
5590 7595 8.095169 CGTTTAAAGATAGATATAGGCCCTGTT 58.905 37.037 0.00 0.00 0.00 3.16
5591 7596 7.612677 CGTTTAAAGATAGATATAGGCCCTGT 58.387 38.462 0.00 0.00 0.00 4.00
5592 7597 6.535508 GCGTTTAAAGATAGATATAGGCCCTG 59.464 42.308 0.00 0.00 0.00 4.45
5593 7598 6.212791 TGCGTTTAAAGATAGATATAGGCCCT 59.787 38.462 0.00 0.00 0.00 5.19
5594 7599 6.403878 TGCGTTTAAAGATAGATATAGGCCC 58.596 40.000 0.00 0.00 0.00 5.80
5595 7600 7.603024 AGTTGCGTTTAAAGATAGATATAGGCC 59.397 37.037 0.00 0.00 0.00 5.19
5596 7601 8.535690 AGTTGCGTTTAAAGATAGATATAGGC 57.464 34.615 0.00 0.00 0.00 3.93
5636 7641 5.535753 TCTTCTCCATCGATAATGCTCAA 57.464 39.130 0.00 0.00 33.71 3.02
5734 7742 2.864114 CACTCCTTGTGCCTCATGG 58.136 57.895 0.00 5.08 40.06 3.66
5755 7774 3.325135 CCAACAGGTCCTCACTTAGACTT 59.675 47.826 0.00 0.00 33.39 3.01
5783 7802 4.577283 GGGGGTTTAAGCAAAAAGAAAACC 59.423 41.667 6.71 6.71 45.37 3.27
5784 7803 5.744666 GGGGGTTTAAGCAAAAAGAAAAC 57.255 39.130 0.00 0.00 0.00 2.43
5822 7841 8.924303 TGCACTATATTACAGAACAAGGAGTAT 58.076 33.333 0.00 0.00 0.00 2.12
5823 7842 8.301252 TGCACTATATTACAGAACAAGGAGTA 57.699 34.615 0.00 0.00 0.00 2.59
5824 7843 7.182817 TGCACTATATTACAGAACAAGGAGT 57.817 36.000 0.00 0.00 0.00 3.85
5825 7844 9.935241 ATATGCACTATATTACAGAACAAGGAG 57.065 33.333 0.00 0.00 0.00 3.69
5857 7878 8.145122 ACTTGTTTGTGAGGTTTGACTTAAAAA 58.855 29.630 0.00 0.00 0.00 1.94
5874 7895 9.705290 AATGTTTTTCTCTACAAACTTGTTTGT 57.295 25.926 27.50 27.50 45.94 2.83
5888 7916 8.031277 GCATTCTGGATGTAAATGTTTTTCTCT 58.969 33.333 0.00 0.00 38.07 3.10
5902 7930 2.596346 TGTGTTTGGCATTCTGGATGT 58.404 42.857 0.00 0.00 38.07 3.06
5986 8014 6.840075 TCAAACTTTGCAAAATTTGACCAAG 58.160 32.000 33.20 15.61 36.42 3.61
5987 8015 6.808008 TCAAACTTTGCAAAATTTGACCAA 57.192 29.167 33.20 18.66 36.42 3.67
5988 8016 6.998968 ATCAAACTTTGCAAAATTTGACCA 57.001 29.167 36.88 23.10 42.22 4.02
5989 8017 8.686397 AAAATCAAACTTTGCAAAATTTGACC 57.314 26.923 36.88 0.00 42.22 4.02
6024 8052 8.946085 CCGTTCCATAATGTAGTGCATATAAAT 58.054 33.333 0.00 0.00 36.67 1.40
6025 8053 7.389330 CCCGTTCCATAATGTAGTGCATATAAA 59.611 37.037 0.00 0.00 36.67 1.40
6026 8054 6.876789 CCCGTTCCATAATGTAGTGCATATAA 59.123 38.462 0.00 0.00 36.67 0.98
6027 8055 6.403049 CCCGTTCCATAATGTAGTGCATATA 58.597 40.000 0.00 0.00 36.67 0.86
6028 8056 5.245531 CCCGTTCCATAATGTAGTGCATAT 58.754 41.667 0.00 0.00 36.67 1.78
6029 8057 4.504165 CCCCGTTCCATAATGTAGTGCATA 60.504 45.833 0.00 0.00 36.67 3.14
6030 8058 3.476552 CCCGTTCCATAATGTAGTGCAT 58.523 45.455 0.00 0.00 40.03 3.96
6031 8059 2.420827 CCCCGTTCCATAATGTAGTGCA 60.421 50.000 0.00 0.00 0.00 4.57
6032 8060 2.218603 CCCCGTTCCATAATGTAGTGC 58.781 52.381 0.00 0.00 0.00 4.40
6033 8061 2.846193 CCCCCGTTCCATAATGTAGTG 58.154 52.381 0.00 0.00 0.00 2.74
6050 8078 4.586306 TCTCCTTTTCAAGTAATCCCCC 57.414 45.455 0.00 0.00 0.00 5.40
6051 8079 6.437477 ACAATTCTCCTTTTCAAGTAATCCCC 59.563 38.462 0.00 0.00 0.00 4.81
6052 8080 7.468141 ACAATTCTCCTTTTCAAGTAATCCC 57.532 36.000 0.00 0.00 0.00 3.85
6053 8081 7.814587 CCAACAATTCTCCTTTTCAAGTAATCC 59.185 37.037 0.00 0.00 0.00 3.01
6054 8082 8.360390 ACCAACAATTCTCCTTTTCAAGTAATC 58.640 33.333 0.00 0.00 0.00 1.75
6055 8083 8.143835 CACCAACAATTCTCCTTTTCAAGTAAT 58.856 33.333 0.00 0.00 0.00 1.89
6056 8084 7.123547 ACACCAACAATTCTCCTTTTCAAGTAA 59.876 33.333 0.00 0.00 0.00 2.24
6057 8085 6.605594 ACACCAACAATTCTCCTTTTCAAGTA 59.394 34.615 0.00 0.00 0.00 2.24
6058 8086 5.422012 ACACCAACAATTCTCCTTTTCAAGT 59.578 36.000 0.00 0.00 0.00 3.16
6059 8087 5.906073 ACACCAACAATTCTCCTTTTCAAG 58.094 37.500 0.00 0.00 0.00 3.02
6060 8088 5.420421 TGACACCAACAATTCTCCTTTTCAA 59.580 36.000 0.00 0.00 0.00 2.69
6061 8089 4.952957 TGACACCAACAATTCTCCTTTTCA 59.047 37.500 0.00 0.00 0.00 2.69
6062 8090 5.507985 CCTGACACCAACAATTCTCCTTTTC 60.508 44.000 0.00 0.00 0.00 2.29
6063 8091 4.342092 CCTGACACCAACAATTCTCCTTTT 59.658 41.667 0.00 0.00 0.00 2.27
6064 8092 3.891366 CCTGACACCAACAATTCTCCTTT 59.109 43.478 0.00 0.00 0.00 3.11
6065 8093 3.490348 CCTGACACCAACAATTCTCCTT 58.510 45.455 0.00 0.00 0.00 3.36
6066 8094 2.815589 GCCTGACACCAACAATTCTCCT 60.816 50.000 0.00 0.00 0.00 3.69
6067 8095 1.541588 GCCTGACACCAACAATTCTCC 59.458 52.381 0.00 0.00 0.00 3.71
6068 8096 2.508526 AGCCTGACACCAACAATTCTC 58.491 47.619 0.00 0.00 0.00 2.87
6069 8097 2.664402 AGCCTGACACCAACAATTCT 57.336 45.000 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.