Multiple sequence alignment - TraesCS5A01G114900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G114900 chr5A 100.000 5006 0 0 1 5006 229928851 229923846 0.000000e+00 9245.0
1 TraesCS5A01G114900 chr5D 95.078 2316 84 13 2702 5006 191903171 191905467 0.000000e+00 3618.0
2 TraesCS5A01G114900 chr5D 91.708 1218 44 11 594 1790 191899281 191900462 0.000000e+00 1637.0
3 TraesCS5A01G114900 chr5D 96.030 932 27 3 1781 2702 191902131 191903062 0.000000e+00 1507.0
4 TraesCS5A01G114900 chr5B 93.019 2335 89 23 2694 5006 196237619 196239901 0.000000e+00 3341.0
5 TraesCS5A01G114900 chr5B 93.118 1671 71 16 445 2080 196232683 196234344 0.000000e+00 2409.0
6 TraesCS5A01G114900 chr5B 93.804 581 26 3 2132 2702 196236947 196237527 0.000000e+00 865.0
7 TraesCS5A01G114900 chr5B 100.000 31 0 0 2107 2137 196235479 196235509 1.950000e-04 58.4
8 TraesCS5A01G114900 chr3A 87.500 688 53 16 4348 5006 589373291 589373974 0.000000e+00 763.0
9 TraesCS5A01G114900 chr3D 88.117 648 41 12 4327 4964 447632229 447632850 0.000000e+00 737.0
10 TraesCS5A01G114900 chr6B 90.517 464 26 5 1 446 26129720 26129257 9.280000e-167 597.0
11 TraesCS5A01G114900 chr3B 87.119 427 22 18 4591 5006 586862220 586862624 2.120000e-123 453.0
12 TraesCS5A01G114900 chr2B 91.837 98 6 2 360 457 50748773 50748678 8.740000e-28 135.0
13 TraesCS5A01G114900 chr7D 96.875 32 1 0 2816 2847 32944313 32944344 3.000000e-03 54.7
14 TraesCS5A01G114900 chr7A 96.875 32 1 0 2816 2847 33191351 33191382 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G114900 chr5A 229923846 229928851 5005 True 9245.00 9245 100.00000 1 5006 1 chr5A.!!$R1 5005
1 TraesCS5A01G114900 chr5D 191899281 191905467 6186 False 2254.00 3618 94.27200 594 5006 3 chr5D.!!$F1 4412
2 TraesCS5A01G114900 chr5B 196232683 196239901 7218 False 1668.35 3341 94.98525 445 5006 4 chr5B.!!$F1 4561
3 TraesCS5A01G114900 chr3A 589373291 589373974 683 False 763.00 763 87.50000 4348 5006 1 chr3A.!!$F1 658
4 TraesCS5A01G114900 chr3D 447632229 447632850 621 False 737.00 737 88.11700 4327 4964 1 chr3D.!!$F1 637

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
86 87 0.029300 GCACTTGCGAGTTGCTGAAA 59.971 50.0 3.02 0.0 46.63 2.69 F
335 336 0.034896 GTGTGTAGTGGGGTGGTCAG 59.965 60.0 0.00 0.0 0.00 3.51 F
1285 1309 0.095935 CGGCTTCTGCAATCTCAACG 59.904 55.0 0.00 0.0 41.91 4.10 F
2439 6725 0.107410 TGCTGACGTTGAACCCACTT 60.107 50.0 0.00 0.0 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1628 1667 1.227497 GCTCTGCGGGATCCTCTTG 60.227 63.158 12.58 0.53 0.00 3.02 R
2214 6490 0.798776 CGGCTCTGTCAAATCGCTTT 59.201 50.000 0.00 0.00 0.00 3.51 R
3174 7669 0.174162 GCCTGCCCAGCACAAATTAG 59.826 55.000 0.00 0.00 33.79 1.73 R
4342 8852 0.249868 AGTTCACGCTGCTTAGCACA 60.250 50.000 1.39 0.00 33.79 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.393271 AACAGCACTGCATCTCCTAC 57.607 50.000 3.30 0.00 0.00 3.18
21 22 1.566211 ACAGCACTGCATCTCCTACT 58.434 50.000 3.30 0.00 0.00 2.57
22 23 1.905215 ACAGCACTGCATCTCCTACTT 59.095 47.619 3.30 0.00 0.00 2.24
23 24 3.099905 ACAGCACTGCATCTCCTACTTA 58.900 45.455 3.30 0.00 0.00 2.24
24 25 3.118956 ACAGCACTGCATCTCCTACTTAC 60.119 47.826 3.30 0.00 0.00 2.34
25 26 3.131933 CAGCACTGCATCTCCTACTTACT 59.868 47.826 3.30 0.00 0.00 2.24
26 27 3.772025 AGCACTGCATCTCCTACTTACTT 59.228 43.478 3.30 0.00 0.00 2.24
27 28 3.868077 GCACTGCATCTCCTACTTACTTG 59.132 47.826 0.00 0.00 0.00 3.16
28 29 3.868077 CACTGCATCTCCTACTTACTTGC 59.132 47.826 0.00 0.00 0.00 4.01
29 30 3.118592 ACTGCATCTCCTACTTACTTGCC 60.119 47.826 0.00 0.00 0.00 4.52
30 31 2.170607 TGCATCTCCTACTTACTTGCCC 59.829 50.000 0.00 0.00 0.00 5.36
31 32 2.485657 GCATCTCCTACTTACTTGCCCC 60.486 54.545 0.00 0.00 0.00 5.80
32 33 2.942604 TCTCCTACTTACTTGCCCCT 57.057 50.000 0.00 0.00 0.00 4.79
33 34 4.223953 CATCTCCTACTTACTTGCCCCTA 58.776 47.826 0.00 0.00 0.00 3.53
34 35 4.554553 TCTCCTACTTACTTGCCCCTAT 57.445 45.455 0.00 0.00 0.00 2.57
35 36 4.223953 TCTCCTACTTACTTGCCCCTATG 58.776 47.826 0.00 0.00 0.00 2.23
36 37 2.704065 TCCTACTTACTTGCCCCTATGC 59.296 50.000 0.00 0.00 0.00 3.14
37 38 2.706190 CCTACTTACTTGCCCCTATGCT 59.294 50.000 0.00 0.00 0.00 3.79
38 39 3.244249 CCTACTTACTTGCCCCTATGCTC 60.244 52.174 0.00 0.00 0.00 4.26
39 40 2.196595 ACTTACTTGCCCCTATGCTCA 58.803 47.619 0.00 0.00 0.00 4.26
40 41 2.576191 ACTTACTTGCCCCTATGCTCAA 59.424 45.455 0.00 0.00 0.00 3.02
41 42 3.209410 CTTACTTGCCCCTATGCTCAAG 58.791 50.000 0.00 0.00 41.07 3.02
42 43 1.289160 ACTTGCCCCTATGCTCAAGA 58.711 50.000 7.69 0.00 39.22 3.02
43 44 1.211457 ACTTGCCCCTATGCTCAAGAG 59.789 52.381 7.69 0.00 39.22 2.85
55 56 2.706339 CTCAAGAGCTATGGGTTGCT 57.294 50.000 0.00 0.00 42.82 3.91
56 57 2.286872 CTCAAGAGCTATGGGTTGCTG 58.713 52.381 0.00 0.00 39.91 4.41
57 58 0.737219 CAAGAGCTATGGGTTGCTGC 59.263 55.000 0.00 0.00 39.91 5.25
58 59 0.394899 AAGAGCTATGGGTTGCTGCC 60.395 55.000 0.00 0.00 39.91 4.85
66 67 2.985847 GGTTGCTGCCCGAAGCTT 60.986 61.111 0.00 0.00 43.90 3.74
67 68 2.256461 GTTGCTGCCCGAAGCTTG 59.744 61.111 2.10 0.00 43.90 4.01
68 69 3.673484 TTGCTGCCCGAAGCTTGC 61.673 61.111 2.10 1.08 43.90 4.01
69 70 4.953010 TGCTGCCCGAAGCTTGCA 62.953 61.111 2.10 6.75 44.82 4.08
70 71 4.410743 GCTGCCCGAAGCTTGCAC 62.411 66.667 2.10 0.00 44.23 4.57
71 72 2.670934 CTGCCCGAAGCTTGCACT 60.671 61.111 2.10 0.00 44.23 4.40
72 73 2.203337 TGCCCGAAGCTTGCACTT 60.203 55.556 2.10 0.00 44.23 3.16
73 74 2.256461 GCCCGAAGCTTGCACTTG 59.744 61.111 2.10 0.00 38.99 3.16
74 75 2.256461 CCCGAAGCTTGCACTTGC 59.744 61.111 2.10 0.00 42.50 4.01
75 76 2.127118 CCGAAGCTTGCACTTGCG 60.127 61.111 2.10 0.00 45.83 4.85
76 77 2.606961 CCGAAGCTTGCACTTGCGA 61.607 57.895 2.10 0.00 45.83 5.10
81 82 4.216963 CTTGCACTTGCGAGTTGC 57.783 55.556 16.94 16.94 45.32 4.17
82 83 1.650912 CTTGCACTTGCGAGTTGCT 59.349 52.632 21.50 0.00 45.32 3.91
83 84 0.659417 CTTGCACTTGCGAGTTGCTG 60.659 55.000 21.50 14.06 45.32 4.41
84 85 1.094650 TTGCACTTGCGAGTTGCTGA 61.095 50.000 21.50 12.25 46.63 4.26
85 86 1.094650 TGCACTTGCGAGTTGCTGAA 61.095 50.000 21.50 6.54 46.63 3.02
86 87 0.029300 GCACTTGCGAGTTGCTGAAA 59.971 50.000 3.02 0.00 46.63 2.69
87 88 1.335324 GCACTTGCGAGTTGCTGAAAT 60.335 47.619 3.02 0.00 46.63 2.17
88 89 2.859806 GCACTTGCGAGTTGCTGAAATT 60.860 45.455 3.02 0.00 46.63 1.82
89 90 2.722629 CACTTGCGAGTTGCTGAAATTG 59.277 45.455 3.02 0.00 46.63 2.32
90 91 1.717645 CTTGCGAGTTGCTGAAATTGC 59.282 47.619 3.50 0.00 46.63 3.56
91 92 0.667453 TGCGAGTTGCTGAAATTGCA 59.333 45.000 3.50 0.00 42.82 4.08
92 93 1.055338 GCGAGTTGCTGAAATTGCAC 58.945 50.000 0.00 0.00 40.40 4.57
93 94 1.335324 GCGAGTTGCTGAAATTGCACT 60.335 47.619 0.00 0.00 40.40 4.40
94 95 2.313234 CGAGTTGCTGAAATTGCACTG 58.687 47.619 0.00 0.00 40.40 3.66
95 96 2.669364 GAGTTGCTGAAATTGCACTGG 58.331 47.619 0.00 0.00 40.40 4.00
96 97 1.342174 AGTTGCTGAAATTGCACTGGG 59.658 47.619 0.00 0.00 40.40 4.45
97 98 1.069049 GTTGCTGAAATTGCACTGGGT 59.931 47.619 0.00 0.00 40.40 4.51
98 99 0.675083 TGCTGAAATTGCACTGGGTG 59.325 50.000 0.00 0.00 35.31 4.61
113 114 2.045926 GTGCAACCTCCATCCGCT 60.046 61.111 0.00 0.00 0.00 5.52
114 115 2.109126 GTGCAACCTCCATCCGCTC 61.109 63.158 0.00 0.00 0.00 5.03
115 116 2.293318 TGCAACCTCCATCCGCTCT 61.293 57.895 0.00 0.00 0.00 4.09
116 117 1.078143 GCAACCTCCATCCGCTCTT 60.078 57.895 0.00 0.00 0.00 2.85
117 118 1.372087 GCAACCTCCATCCGCTCTTG 61.372 60.000 0.00 0.00 0.00 3.02
118 119 0.745845 CAACCTCCATCCGCTCTTGG 60.746 60.000 0.00 0.00 0.00 3.61
119 120 1.201429 AACCTCCATCCGCTCTTGGT 61.201 55.000 0.00 0.00 34.48 3.67
120 121 1.153289 CCTCCATCCGCTCTTGGTG 60.153 63.158 0.00 0.00 34.48 4.17
121 122 1.153289 CTCCATCCGCTCTTGGTGG 60.153 63.158 0.00 0.00 46.40 4.61
122 123 2.825836 CCATCCGCTCTTGGTGGC 60.826 66.667 0.00 0.00 44.77 5.01
127 128 3.659092 CGCTCTTGGTGGCGCAAA 61.659 61.111 10.83 0.00 44.64 3.68
128 129 2.727544 GCTCTTGGTGGCGCAAAA 59.272 55.556 10.83 0.00 0.00 2.44
129 130 1.290009 GCTCTTGGTGGCGCAAAAT 59.710 52.632 10.83 0.00 0.00 1.82
130 131 0.733909 GCTCTTGGTGGCGCAAAATC 60.734 55.000 10.83 0.00 0.00 2.17
131 132 0.597568 CTCTTGGTGGCGCAAAATCA 59.402 50.000 10.83 0.00 0.00 2.57
132 133 1.000385 CTCTTGGTGGCGCAAAATCAA 60.000 47.619 10.83 6.10 0.00 2.57
133 134 1.139163 CTTGGTGGCGCAAAATCAAC 58.861 50.000 10.83 0.00 0.00 3.18
134 135 0.461548 TTGGTGGCGCAAAATCAACA 59.538 45.000 10.83 2.89 0.00 3.33
135 136 0.249238 TGGTGGCGCAAAATCAACAC 60.249 50.000 10.83 5.05 0.00 3.32
136 137 0.943835 GGTGGCGCAAAATCAACACC 60.944 55.000 10.83 11.26 41.18 4.16
137 138 1.007964 TGGCGCAAAATCAACACCG 60.008 52.632 10.83 0.00 0.00 4.94
138 139 1.732683 GGCGCAAAATCAACACCGG 60.733 57.895 10.83 0.00 0.00 5.28
139 140 1.007849 GCGCAAAATCAACACCGGT 60.008 52.632 0.00 0.00 0.00 5.28
140 141 1.274798 GCGCAAAATCAACACCGGTG 61.275 55.000 32.83 32.83 0.00 4.94
149 150 2.513895 ACACCGGTGTTCCCAAGG 59.486 61.111 34.41 7.90 41.83 3.61
150 151 2.073716 ACACCGGTGTTCCCAAGGA 61.074 57.895 34.41 0.00 41.83 3.36
151 152 1.378762 CACCGGTGTTCCCAAGGAT 59.621 57.895 26.95 0.00 0.00 3.24
152 153 0.960364 CACCGGTGTTCCCAAGGATG 60.960 60.000 26.95 0.00 0.00 3.51
153 154 2.046285 CCGGTGTTCCCAAGGATGC 61.046 63.158 0.00 0.00 0.00 3.91
154 155 2.398554 CGGTGTTCCCAAGGATGCG 61.399 63.158 0.00 0.00 0.00 4.73
155 156 2.700773 GGTGTTCCCAAGGATGCGC 61.701 63.158 0.00 0.00 0.00 6.09
156 157 2.745884 TGTTCCCAAGGATGCGCG 60.746 61.111 0.00 0.00 0.00 6.86
157 158 4.179579 GTTCCCAAGGATGCGCGC 62.180 66.667 27.26 27.26 0.00 6.86
162 163 3.736100 CAAGGATGCGCGCCACAA 61.736 61.111 30.77 10.60 0.00 3.33
163 164 3.434319 AAGGATGCGCGCCACAAG 61.434 61.111 30.77 0.00 0.00 3.16
166 167 4.824166 GATGCGCGCCACAAGCAG 62.824 66.667 30.77 0.00 44.55 4.24
179 180 2.670934 AGCAGGTCCGCTTTGCTG 60.671 61.111 2.65 0.00 45.75 4.41
180 181 2.980233 GCAGGTCCGCTTTGCTGT 60.980 61.111 0.00 0.00 35.05 4.40
181 182 2.949106 CAGGTCCGCTTTGCTGTG 59.051 61.111 0.00 0.00 0.00 3.66
182 183 1.893808 CAGGTCCGCTTTGCTGTGT 60.894 57.895 0.00 0.00 0.00 3.72
183 184 0.602638 CAGGTCCGCTTTGCTGTGTA 60.603 55.000 0.00 0.00 0.00 2.90
184 185 0.602905 AGGTCCGCTTTGCTGTGTAC 60.603 55.000 0.00 0.00 0.00 2.90
185 186 0.882927 GGTCCGCTTTGCTGTGTACA 60.883 55.000 0.00 0.00 0.00 2.90
186 187 1.156736 GTCCGCTTTGCTGTGTACAT 58.843 50.000 0.00 0.00 0.00 2.29
187 188 1.535462 GTCCGCTTTGCTGTGTACATT 59.465 47.619 0.00 0.00 0.00 2.71
188 189 1.535028 TCCGCTTTGCTGTGTACATTG 59.465 47.619 0.00 0.00 0.00 2.82
189 190 1.330306 CGCTTTGCTGTGTACATTGC 58.670 50.000 13.80 13.80 0.00 3.56
190 191 1.701704 GCTTTGCTGTGTACATTGCC 58.298 50.000 16.72 0.00 0.00 4.52
191 192 1.270550 GCTTTGCTGTGTACATTGCCT 59.729 47.619 16.72 0.00 0.00 4.75
192 193 2.923605 GCTTTGCTGTGTACATTGCCTG 60.924 50.000 16.72 9.91 0.00 4.85
193 194 1.246649 TTGCTGTGTACATTGCCTGG 58.753 50.000 16.72 0.00 0.00 4.45
194 195 0.399833 TGCTGTGTACATTGCCTGGA 59.600 50.000 16.72 0.61 0.00 3.86
195 196 1.202867 TGCTGTGTACATTGCCTGGAA 60.203 47.619 16.72 0.00 0.00 3.53
196 197 1.200020 GCTGTGTACATTGCCTGGAAC 59.800 52.381 0.00 0.00 0.00 3.62
197 198 2.503331 CTGTGTACATTGCCTGGAACA 58.497 47.619 0.00 0.00 0.00 3.18
198 199 3.084039 CTGTGTACATTGCCTGGAACAT 58.916 45.455 0.00 0.00 38.20 2.71
199 200 3.495331 TGTGTACATTGCCTGGAACATT 58.505 40.909 0.00 0.00 38.20 2.71
200 201 3.894427 TGTGTACATTGCCTGGAACATTT 59.106 39.130 0.00 0.00 38.20 2.32
201 202 4.236935 GTGTACATTGCCTGGAACATTTG 58.763 43.478 0.00 0.00 38.20 2.32
202 203 3.257873 TGTACATTGCCTGGAACATTTGG 59.742 43.478 0.00 0.00 38.20 3.28
203 204 2.607499 ACATTGCCTGGAACATTTGGA 58.393 42.857 0.00 0.00 38.20 3.53
204 205 2.971330 ACATTGCCTGGAACATTTGGAA 59.029 40.909 0.00 0.00 38.20 3.53
205 206 3.007182 ACATTGCCTGGAACATTTGGAAG 59.993 43.478 0.00 0.00 38.20 3.46
206 207 1.631405 TGCCTGGAACATTTGGAAGG 58.369 50.000 0.00 0.00 38.20 3.46
207 208 1.146774 TGCCTGGAACATTTGGAAGGA 59.853 47.619 0.00 0.00 38.20 3.36
208 209 1.821136 GCCTGGAACATTTGGAAGGAG 59.179 52.381 0.00 0.00 38.20 3.69
209 210 1.821136 CCTGGAACATTTGGAAGGAGC 59.179 52.381 0.00 0.00 38.20 4.70
210 211 1.470098 CTGGAACATTTGGAAGGAGCG 59.530 52.381 0.00 0.00 38.20 5.03
211 212 0.811281 GGAACATTTGGAAGGAGCGG 59.189 55.000 0.00 0.00 0.00 5.52
212 213 1.613255 GGAACATTTGGAAGGAGCGGA 60.613 52.381 0.00 0.00 0.00 5.54
213 214 2.159382 GAACATTTGGAAGGAGCGGAA 58.841 47.619 0.00 0.00 0.00 4.30
214 215 1.534729 ACATTTGGAAGGAGCGGAAC 58.465 50.000 0.00 0.00 0.00 3.62
215 216 0.811281 CATTTGGAAGGAGCGGAACC 59.189 55.000 0.00 0.00 0.00 3.62
216 217 0.676782 ATTTGGAAGGAGCGGAACCG 60.677 55.000 9.00 9.00 43.09 4.44
217 218 2.047213 TTTGGAAGGAGCGGAACCGT 62.047 55.000 14.63 1.93 42.09 4.83
218 219 2.125633 GGAAGGAGCGGAACCGTC 60.126 66.667 14.63 10.31 42.09 4.79
219 220 2.506438 GAAGGAGCGGAACCGTCG 60.506 66.667 14.63 0.00 42.09 5.12
225 226 4.004241 GCGGAACCGTCGCGTTTT 62.004 61.111 14.63 0.00 43.71 2.43
226 227 2.169327 CGGAACCGTCGCGTTTTC 59.831 61.111 5.77 4.66 34.35 2.29
227 228 2.552768 GGAACCGTCGCGTTTTCC 59.447 61.111 5.77 10.26 32.67 3.13
228 229 2.246042 GGAACCGTCGCGTTTTCCA 61.246 57.895 19.00 0.00 37.20 3.53
229 230 1.203313 GAACCGTCGCGTTTTCCAG 59.797 57.895 5.77 0.00 0.00 3.86
230 231 2.166584 GAACCGTCGCGTTTTCCAGG 62.167 60.000 5.77 2.93 0.00 4.45
231 232 4.084888 CCGTCGCGTTTTCCAGGC 62.085 66.667 5.77 0.00 0.00 4.85
236 237 3.027292 GCGTTTTCCAGGCGACAA 58.973 55.556 0.00 0.00 0.00 3.18
237 238 1.357334 GCGTTTTCCAGGCGACAAA 59.643 52.632 0.00 0.00 0.00 2.83
238 239 0.039527 GCGTTTTCCAGGCGACAAAT 60.040 50.000 0.00 0.00 0.00 2.32
239 240 1.685302 CGTTTTCCAGGCGACAAATG 58.315 50.000 0.00 0.00 0.00 2.32
240 241 1.418373 GTTTTCCAGGCGACAAATGC 58.582 50.000 0.00 0.00 0.00 3.56
241 242 0.039617 TTTTCCAGGCGACAAATGCG 60.040 50.000 0.00 0.00 0.00 4.73
248 249 2.480555 CGACAAATGCGCAGGTCC 59.519 61.111 24.79 10.54 0.00 4.46
249 250 2.877691 GACAAATGCGCAGGTCCC 59.122 61.111 18.32 0.69 0.00 4.46
250 251 1.971167 GACAAATGCGCAGGTCCCA 60.971 57.895 18.32 0.00 0.00 4.37
251 252 1.523154 GACAAATGCGCAGGTCCCAA 61.523 55.000 18.32 0.00 0.00 4.12
252 253 1.080569 CAAATGCGCAGGTCCCAAC 60.081 57.895 18.32 0.00 0.00 3.77
253 254 2.275380 AAATGCGCAGGTCCCAACC 61.275 57.895 18.32 0.00 46.87 3.77
262 263 3.912899 GGTCCCAACCATTTTGCAG 57.087 52.632 0.00 0.00 45.68 4.41
263 264 0.320683 GGTCCCAACCATTTTGCAGC 60.321 55.000 0.00 0.00 45.68 5.25
264 265 0.681175 GTCCCAACCATTTTGCAGCT 59.319 50.000 0.00 0.00 0.00 4.24
265 266 1.070601 GTCCCAACCATTTTGCAGCTT 59.929 47.619 0.00 0.00 0.00 3.74
266 267 1.070445 TCCCAACCATTTTGCAGCTTG 59.930 47.619 0.00 0.00 0.00 4.01
267 268 1.202675 CCCAACCATTTTGCAGCTTGT 60.203 47.619 0.00 0.00 0.00 3.16
268 269 1.868498 CCAACCATTTTGCAGCTTGTG 59.132 47.619 0.00 0.00 0.00 3.33
269 270 2.483363 CCAACCATTTTGCAGCTTGTGA 60.483 45.455 0.00 0.00 0.00 3.58
270 271 3.196463 CAACCATTTTGCAGCTTGTGAA 58.804 40.909 0.00 0.00 0.00 3.18
271 272 3.102052 ACCATTTTGCAGCTTGTGAAG 57.898 42.857 0.00 0.00 0.00 3.02
272 273 2.224113 ACCATTTTGCAGCTTGTGAAGG 60.224 45.455 0.00 0.00 0.00 3.46
273 274 2.036217 CCATTTTGCAGCTTGTGAAGGA 59.964 45.455 0.00 0.00 0.00 3.36
274 275 3.306502 CCATTTTGCAGCTTGTGAAGGAT 60.307 43.478 0.00 0.00 0.00 3.24
275 276 3.374220 TTTTGCAGCTTGTGAAGGATG 57.626 42.857 0.00 0.00 0.00 3.51
276 277 2.275134 TTGCAGCTTGTGAAGGATGA 57.725 45.000 0.00 0.00 0.00 2.92
277 278 1.817357 TGCAGCTTGTGAAGGATGAG 58.183 50.000 0.00 0.00 0.00 2.90
278 279 1.348696 TGCAGCTTGTGAAGGATGAGA 59.651 47.619 0.00 0.00 0.00 3.27
279 280 2.026542 TGCAGCTTGTGAAGGATGAGAT 60.027 45.455 0.00 0.00 0.00 2.75
280 281 3.015327 GCAGCTTGTGAAGGATGAGATT 58.985 45.455 0.00 0.00 0.00 2.40
281 282 3.181499 GCAGCTTGTGAAGGATGAGATTG 60.181 47.826 0.00 0.00 0.00 2.67
282 283 3.377485 CAGCTTGTGAAGGATGAGATTGG 59.623 47.826 0.00 0.00 0.00 3.16
283 284 2.098770 GCTTGTGAAGGATGAGATTGGC 59.901 50.000 0.00 0.00 0.00 4.52
284 285 2.425143 TGTGAAGGATGAGATTGGCC 57.575 50.000 0.00 0.00 0.00 5.36
285 286 1.918262 TGTGAAGGATGAGATTGGCCT 59.082 47.619 3.32 0.00 0.00 5.19
286 287 2.092753 TGTGAAGGATGAGATTGGCCTC 60.093 50.000 3.32 0.00 0.00 4.70
287 288 1.492176 TGAAGGATGAGATTGGCCTCC 59.508 52.381 3.32 0.00 32.32 4.30
288 289 1.773653 GAAGGATGAGATTGGCCTCCT 59.226 52.381 3.32 2.33 37.96 3.69
289 290 1.138568 AGGATGAGATTGGCCTCCTG 58.861 55.000 3.32 0.00 35.05 3.86
290 291 0.536915 GGATGAGATTGGCCTCCTGC 60.537 60.000 3.32 0.00 40.16 4.85
291 292 0.182061 GATGAGATTGGCCTCCTGCA 59.818 55.000 3.32 0.00 43.89 4.41
292 293 0.183014 ATGAGATTGGCCTCCTGCAG 59.817 55.000 6.78 6.78 43.89 4.41
293 294 1.153005 GAGATTGGCCTCCTGCAGG 60.153 63.158 27.87 27.87 46.82 4.85
307 308 3.847602 CAGGAGGCAGCTCGGGAG 61.848 72.222 0.00 0.00 0.00 4.30
308 309 4.390556 AGGAGGCAGCTCGGGAGT 62.391 66.667 0.00 0.00 0.00 3.85
309 310 2.442272 GGAGGCAGCTCGGGAGTA 60.442 66.667 0.00 0.00 0.00 2.59
310 311 2.494530 GGAGGCAGCTCGGGAGTAG 61.495 68.421 0.00 0.00 0.00 2.57
311 312 1.755008 GAGGCAGCTCGGGAGTAGT 60.755 63.158 0.00 0.00 0.00 2.73
312 313 1.305381 AGGCAGCTCGGGAGTAGTT 60.305 57.895 0.00 0.00 0.00 2.24
313 314 1.153549 GGCAGCTCGGGAGTAGTTG 60.154 63.158 0.00 0.00 0.00 3.16
314 315 1.592223 GCAGCTCGGGAGTAGTTGT 59.408 57.895 0.00 0.00 0.00 3.32
315 316 0.037232 GCAGCTCGGGAGTAGTTGTT 60.037 55.000 0.00 0.00 0.00 2.83
316 317 1.714794 CAGCTCGGGAGTAGTTGTTG 58.285 55.000 0.00 0.00 0.00 3.33
317 318 1.000955 CAGCTCGGGAGTAGTTGTTGT 59.999 52.381 0.00 0.00 0.00 3.32
318 319 1.000955 AGCTCGGGAGTAGTTGTTGTG 59.999 52.381 0.00 0.00 0.00 3.33
319 320 1.270147 GCTCGGGAGTAGTTGTTGTGT 60.270 52.381 0.00 0.00 0.00 3.72
320 321 2.404215 CTCGGGAGTAGTTGTTGTGTG 58.596 52.381 0.00 0.00 0.00 3.82
321 322 1.758280 TCGGGAGTAGTTGTTGTGTGT 59.242 47.619 0.00 0.00 0.00 3.72
322 323 2.957680 TCGGGAGTAGTTGTTGTGTGTA 59.042 45.455 0.00 0.00 0.00 2.90
323 324 3.005050 TCGGGAGTAGTTGTTGTGTGTAG 59.995 47.826 0.00 0.00 0.00 2.74
324 325 3.243636 CGGGAGTAGTTGTTGTGTGTAGT 60.244 47.826 0.00 0.00 0.00 2.73
325 326 4.056050 GGGAGTAGTTGTTGTGTGTAGTG 58.944 47.826 0.00 0.00 0.00 2.74
326 327 4.056050 GGAGTAGTTGTTGTGTGTAGTGG 58.944 47.826 0.00 0.00 0.00 4.00
327 328 4.056050 GAGTAGTTGTTGTGTGTAGTGGG 58.944 47.826 0.00 0.00 0.00 4.61
328 329 2.341846 AGTTGTTGTGTGTAGTGGGG 57.658 50.000 0.00 0.00 0.00 4.96
329 330 1.562475 AGTTGTTGTGTGTAGTGGGGT 59.438 47.619 0.00 0.00 0.00 4.95
330 331 1.673920 GTTGTTGTGTGTAGTGGGGTG 59.326 52.381 0.00 0.00 0.00 4.61
331 332 0.181587 TGTTGTGTGTAGTGGGGTGG 59.818 55.000 0.00 0.00 0.00 4.61
332 333 0.181824 GTTGTGTGTAGTGGGGTGGT 59.818 55.000 0.00 0.00 0.00 4.16
333 334 0.470766 TTGTGTGTAGTGGGGTGGTC 59.529 55.000 0.00 0.00 0.00 4.02
334 335 0.691413 TGTGTGTAGTGGGGTGGTCA 60.691 55.000 0.00 0.00 0.00 4.02
335 336 0.034896 GTGTGTAGTGGGGTGGTCAG 59.965 60.000 0.00 0.00 0.00 3.51
336 337 1.003718 GTGTAGTGGGGTGGTCAGC 60.004 63.158 0.00 0.00 0.00 4.26
343 344 3.241520 GGGTGGTCAGCCCCTATC 58.758 66.667 7.91 0.00 42.92 2.08
344 345 1.384643 GGGTGGTCAGCCCCTATCT 60.385 63.158 7.91 0.00 42.92 1.98
345 346 1.700042 GGGTGGTCAGCCCCTATCTG 61.700 65.000 7.91 0.00 42.92 2.90
346 347 0.691078 GGTGGTCAGCCCCTATCTGA 60.691 60.000 0.00 0.00 38.16 3.27
347 348 1.428869 GTGGTCAGCCCCTATCTGAT 58.571 55.000 0.00 0.00 41.93 2.90
348 349 1.346068 GTGGTCAGCCCCTATCTGATC 59.654 57.143 0.00 0.00 41.93 2.92
349 350 1.062198 TGGTCAGCCCCTATCTGATCA 60.062 52.381 2.17 2.17 46.15 2.92
350 351 2.264455 GGTCAGCCCCTATCTGATCAT 58.736 52.381 0.00 0.00 41.93 2.45
351 352 2.027377 GGTCAGCCCCTATCTGATCATG 60.027 54.545 0.00 0.00 41.93 3.07
352 353 2.902486 GTCAGCCCCTATCTGATCATGA 59.098 50.000 0.00 0.00 41.93 3.07
353 354 3.518705 GTCAGCCCCTATCTGATCATGAT 59.481 47.826 8.25 8.25 41.93 2.45
354 355 4.019501 GTCAGCCCCTATCTGATCATGATT 60.020 45.833 10.14 0.00 41.93 2.57
355 356 4.224594 TCAGCCCCTATCTGATCATGATTC 59.775 45.833 10.14 4.08 35.81 2.52
356 357 4.225492 CAGCCCCTATCTGATCATGATTCT 59.775 45.833 10.14 0.00 33.54 2.40
357 358 4.470664 AGCCCCTATCTGATCATGATTCTC 59.529 45.833 10.14 0.00 0.00 2.87
358 359 4.470664 GCCCCTATCTGATCATGATTCTCT 59.529 45.833 10.14 0.00 0.00 3.10
359 360 5.660417 GCCCCTATCTGATCATGATTCTCTA 59.340 44.000 10.14 0.00 0.00 2.43
360 361 6.183360 GCCCCTATCTGATCATGATTCTCTAG 60.183 46.154 10.14 8.97 0.00 2.43
361 362 7.124721 CCCCTATCTGATCATGATTCTCTAGA 58.875 42.308 10.14 9.28 0.00 2.43
362 363 7.618907 CCCCTATCTGATCATGATTCTCTAGAA 59.381 40.741 10.14 0.00 38.56 2.10
363 364 8.469200 CCCTATCTGATCATGATTCTCTAGAAC 58.531 40.741 10.14 0.00 36.80 3.01
364 365 9.246670 CCTATCTGATCATGATTCTCTAGAACT 57.753 37.037 10.14 0.00 36.80 3.01
367 368 8.530804 TCTGATCATGATTCTCTAGAACTTCA 57.469 34.615 10.14 0.00 36.80 3.02
368 369 8.631797 TCTGATCATGATTCTCTAGAACTTCAG 58.368 37.037 10.14 8.53 36.80 3.02
369 370 8.303780 TGATCATGATTCTCTAGAACTTCAGT 57.696 34.615 10.14 0.00 36.80 3.41
370 371 8.756927 TGATCATGATTCTCTAGAACTTCAGTT 58.243 33.333 10.14 0.00 41.64 3.16
386 387 8.834749 AACTTCAGTTCACCTTTCTCTATAAC 57.165 34.615 0.00 0.00 31.64 1.89
387 388 8.196378 ACTTCAGTTCACCTTTCTCTATAACT 57.804 34.615 0.00 0.00 0.00 2.24
388 389 8.308207 ACTTCAGTTCACCTTTCTCTATAACTC 58.692 37.037 0.00 0.00 0.00 3.01
389 390 8.423906 TTCAGTTCACCTTTCTCTATAACTCT 57.576 34.615 0.00 0.00 0.00 3.24
390 391 7.831753 TCAGTTCACCTTTCTCTATAACTCTG 58.168 38.462 0.00 0.00 0.00 3.35
391 392 7.451877 TCAGTTCACCTTTCTCTATAACTCTGT 59.548 37.037 0.00 0.00 0.00 3.41
392 393 8.740906 CAGTTCACCTTTCTCTATAACTCTGTA 58.259 37.037 0.00 0.00 0.00 2.74
393 394 9.310449 AGTTCACCTTTCTCTATAACTCTGTAA 57.690 33.333 0.00 0.00 0.00 2.41
403 404 9.404848 TCTCTATAACTCTGTAATTCTTTCCGA 57.595 33.333 0.00 0.00 0.00 4.55
413 414 9.424319 TCTGTAATTCTTTCCGATCTATAATGC 57.576 33.333 0.00 0.00 0.00 3.56
414 415 9.208022 CTGTAATTCTTTCCGATCTATAATGCA 57.792 33.333 0.00 0.00 0.00 3.96
415 416 9.554395 TGTAATTCTTTCCGATCTATAATGCAA 57.446 29.630 0.00 0.00 0.00 4.08
418 419 7.439157 TTCTTTCCGATCTATAATGCAATGG 57.561 36.000 0.00 0.00 0.00 3.16
419 420 5.412594 TCTTTCCGATCTATAATGCAATGGC 59.587 40.000 0.00 0.00 41.68 4.40
439 440 1.537202 CAGAACTTCTGCCTTTTCCCG 59.463 52.381 5.84 0.00 37.72 5.14
440 441 1.143073 AGAACTTCTGCCTTTTCCCGT 59.857 47.619 0.00 0.00 0.00 5.28
441 442 1.535896 GAACTTCTGCCTTTTCCCGTC 59.464 52.381 0.00 0.00 0.00 4.79
442 443 0.472471 ACTTCTGCCTTTTCCCGTCA 59.528 50.000 0.00 0.00 0.00 4.35
443 444 1.133915 ACTTCTGCCTTTTCCCGTCAA 60.134 47.619 0.00 0.00 0.00 3.18
454 455 6.508777 CCTTTTCCCGTCAAAAGTAATTCAA 58.491 36.000 12.58 0.00 40.43 2.69
463 464 7.367285 CGTCAAAAGTAATTCAAAGATCCCAA 58.633 34.615 0.00 0.00 0.00 4.12
476 477 8.945195 TCAAAGATCCCAATATTGCATTCTAT 57.055 30.769 10.11 0.00 0.00 1.98
510 511 9.135189 TCAAAATACTTTCTCCATCCCATAATG 57.865 33.333 0.00 0.00 0.00 1.90
511 512 8.362639 CAAAATACTTTCTCCATCCCATAATGG 58.637 37.037 0.00 0.00 46.44 3.16
526 527 7.383687 TCCCATAATGGAAGACGTATTACATC 58.616 38.462 20.36 0.00 40.96 3.06
544 545 4.050553 ACATCGTTTTGTTGCTGGAATTG 58.949 39.130 0.00 0.00 0.00 2.32
562 580 0.467290 TGAGGACAAAGTGCCCCAAC 60.467 55.000 0.00 0.00 0.00 3.77
572 590 1.305465 TGCCCCAACCGCTAGTCTA 60.305 57.895 0.00 0.00 0.00 2.59
573 591 1.327690 TGCCCCAACCGCTAGTCTAG 61.328 60.000 2.18 2.18 0.00 2.43
574 592 1.328430 GCCCCAACCGCTAGTCTAGT 61.328 60.000 8.68 0.00 0.00 2.57
575 593 0.745468 CCCCAACCGCTAGTCTAGTC 59.255 60.000 8.68 0.76 0.00 2.59
584 602 2.728225 CGCTAGTCTAGTCAACACCGTG 60.728 54.545 8.68 0.00 0.00 4.94
760 780 5.480205 AGTCTCTACTCCCGCTTTTAAAAG 58.520 41.667 21.32 21.32 39.03 2.27
918 938 0.886490 ACTGAAGCAGAGCAAACGGG 60.886 55.000 0.82 0.00 35.18 5.28
935 955 2.655685 GTCGGCTCGAGATTCGGC 60.656 66.667 18.75 13.98 40.88 5.54
962 986 1.156736 CAATTCGGTGACCTGTGTCC 58.843 55.000 0.00 0.00 41.01 4.02
1285 1309 0.095935 CGGCTTCTGCAATCTCAACG 59.904 55.000 0.00 0.00 41.91 4.10
1368 1407 2.633967 CCTTCTCTCCCCATCAGATCAG 59.366 54.545 0.00 0.00 0.00 2.90
1427 1466 1.500396 GCTTTGGTAAACGAGGCCG 59.500 57.895 0.00 0.00 42.50 6.13
1490 1529 1.214673 ACTCTAGGCATCTCGGGTACA 59.785 52.381 0.00 0.00 0.00 2.90
1491 1530 2.158445 ACTCTAGGCATCTCGGGTACAT 60.158 50.000 0.00 0.00 0.00 2.29
1502 1541 4.147321 TCTCGGGTACATATAACCACTCC 58.853 47.826 8.31 0.00 38.18 3.85
1559 1598 2.060284 GATTCGCATGTTGCAAGCAAA 58.940 42.857 9.32 0.00 45.36 3.68
1560 1599 2.151881 TTCGCATGTTGCAAGCAAAT 57.848 40.000 9.32 3.26 45.36 2.32
1561 1600 1.420378 TCGCATGTTGCAAGCAAATG 58.580 45.000 9.32 14.77 45.36 2.32
1564 1603 1.874872 GCATGTTGCAAGCAAATGGTT 59.125 42.857 20.63 0.00 44.26 3.67
1580 1619 9.423061 AGCAAATGGTTACATTGTTTTCTTATC 57.577 29.630 0.00 0.00 46.25 1.75
1581 1620 9.423061 GCAAATGGTTACATTGTTTTCTTATCT 57.577 29.630 0.00 0.00 46.25 1.98
1628 1667 3.431725 GTGGCCAAGTACTGCGCC 61.432 66.667 21.37 21.37 40.15 6.53
1658 1697 4.368391 CAGAGCTGCACGGTTCTT 57.632 55.556 1.02 0.00 0.00 2.52
1811 3527 5.233957 TGGCTGATGACGTTCAAATTATG 57.766 39.130 0.00 0.00 0.00 1.90
1813 3529 4.201950 GGCTGATGACGTTCAAATTATGCT 60.202 41.667 0.00 0.00 0.00 3.79
2192 6468 4.275936 CCAGTTCAGTCAAAACTTCCGATT 59.724 41.667 0.00 0.00 34.79 3.34
2214 6490 1.339055 CCAGGCGACCTCTCAATCAAA 60.339 52.381 0.00 0.00 0.00 2.69
2223 6499 5.617751 CGACCTCTCAATCAAAAAGCGATTT 60.618 40.000 0.00 0.00 30.65 2.17
2315 6591 5.407084 TCAATGTACACCATGTTCAGTTACG 59.593 40.000 0.00 0.00 31.35 3.18
2356 6632 0.818296 CTGACTTCTCCCCAGGTACG 59.182 60.000 0.00 0.00 0.00 3.67
2413 6689 2.100749 TCATTCGCAGCCGATCTTCTTA 59.899 45.455 0.00 0.00 43.97 2.10
2414 6690 2.890808 TTCGCAGCCGATCTTCTTAT 57.109 45.000 0.00 0.00 43.97 1.73
2416 6692 0.510359 CGCAGCCGATCTTCTTATGC 59.490 55.000 0.00 0.00 36.29 3.14
2417 6693 1.871408 CGCAGCCGATCTTCTTATGCT 60.871 52.381 0.00 0.00 36.29 3.79
2433 6719 0.937304 TGCTTCTGCTGACGTTGAAC 59.063 50.000 0.00 0.00 40.48 3.18
2439 6725 0.107410 TGCTGACGTTGAACCCACTT 60.107 50.000 0.00 0.00 0.00 3.16
2443 6729 2.544267 CTGACGTTGAACCCACTTTCTC 59.456 50.000 0.00 0.00 0.00 2.87
2489 6775 0.878416 GGTGCGAGCCATGTTTACAA 59.122 50.000 0.00 0.00 0.00 2.41
2497 6783 2.276472 CCATGTTTACAATGGCCGTG 57.724 50.000 0.00 0.33 0.00 4.94
2563 6849 1.827969 CGGAGGTGATGAAGGAGTTCT 59.172 52.381 0.00 0.00 33.38 3.01
2564 6850 2.159170 CGGAGGTGATGAAGGAGTTCTC 60.159 54.545 0.00 0.00 33.38 2.87
2593 6879 1.596477 GGCATCATCAGCTCCGTCC 60.596 63.158 0.00 0.00 0.00 4.79
2856 7350 2.104451 CTCCAACATCCTCATCTCCCAG 59.896 54.545 0.00 0.00 0.00 4.45
2946 7440 2.508663 GACGACTTAGCCGGCACC 60.509 66.667 31.54 11.22 34.67 5.01
3003 7497 1.198713 AGGTCAGCGACAAGATGGAT 58.801 50.000 10.14 0.00 36.78 3.41
3012 7506 2.735444 CGACAAGATGGATGTGTACGCT 60.735 50.000 8.10 0.00 0.00 5.07
3105 7599 4.033709 AGAGCATAGTGATGTGGGTAAGT 58.966 43.478 0.00 0.00 35.30 2.24
3106 7600 5.208890 AGAGCATAGTGATGTGGGTAAGTA 58.791 41.667 0.00 0.00 35.30 2.24
3107 7601 5.841237 AGAGCATAGTGATGTGGGTAAGTAT 59.159 40.000 0.00 0.00 35.30 2.12
3108 7602 6.015010 AGAGCATAGTGATGTGGGTAAGTATC 60.015 42.308 0.00 0.00 35.30 2.24
3109 7603 5.841237 AGCATAGTGATGTGGGTAAGTATCT 59.159 40.000 0.00 0.00 35.30 1.98
3174 7669 5.640732 ACAATCGTGAATGGTGCTTTAATC 58.359 37.500 0.00 0.00 0.00 1.75
3389 7884 5.127491 TCCATTTTACTTGGTCGTCTTGTT 58.873 37.500 0.00 0.00 35.64 2.83
3390 7885 5.237779 TCCATTTTACTTGGTCGTCTTGTTC 59.762 40.000 0.00 0.00 35.64 3.18
3391 7886 4.782252 TTTTACTTGGTCGTCTTGTTCG 57.218 40.909 0.00 0.00 0.00 3.95
3392 7887 3.713858 TTACTTGGTCGTCTTGTTCGA 57.286 42.857 0.00 0.00 34.91 3.71
3615 8110 4.544689 CTCGCTCTGCTCGACGGG 62.545 72.222 0.00 0.00 32.08 5.28
3645 8140 2.278013 GATGACGACGACTCCGCC 60.278 66.667 0.00 0.00 39.95 6.13
3777 8272 1.794222 CGGGAGTGCACGGATTTTC 59.206 57.895 12.01 1.73 37.25 2.29
3792 8289 4.445718 CGGATTTTCGTGTAGATCATCAGG 59.554 45.833 0.00 0.00 0.00 3.86
3851 8348 8.425577 TGTTGAGTTGAGTTTTCTCTTTCTAG 57.574 34.615 0.00 0.00 46.30 2.43
3852 8349 8.041323 TGTTGAGTTGAGTTTTCTCTTTCTAGT 58.959 33.333 0.00 0.00 46.30 2.57
3871 8368 6.555711 TCTAGTTAGTTAGTAGGGTGGTTGT 58.444 40.000 0.00 0.00 31.70 3.32
3880 8377 4.711399 AGTAGGGTGGTTGTACAGTTTTC 58.289 43.478 0.00 0.00 0.00 2.29
3957 8454 4.469469 TCCAAGGACCAAAGGAGAAAAT 57.531 40.909 0.00 0.00 0.00 1.82
3995 8492 7.607991 CAGTTTGAAGTTTCTATGATACTGGGT 59.392 37.037 0.00 0.00 0.00 4.51
3996 8493 7.607991 AGTTTGAAGTTTCTATGATACTGGGTG 59.392 37.037 0.00 0.00 0.00 4.61
3997 8494 5.989477 TGAAGTTTCTATGATACTGGGTGG 58.011 41.667 0.00 0.00 0.00 4.61
3998 8495 5.104527 TGAAGTTTCTATGATACTGGGTGGG 60.105 44.000 0.00 0.00 0.00 4.61
4007 8504 1.095130 TACTGGGTGGGAGGGAACTA 58.905 55.000 0.00 0.00 44.43 2.24
4020 8517 6.906901 TGGGAGGGAACTATAGAATTACAACT 59.093 38.462 6.78 0.00 44.43 3.16
4026 8523 7.279313 GGGAACTATAGAATTACAACTTCGCAA 59.721 37.037 6.78 0.00 0.00 4.85
4027 8524 8.114905 GGAACTATAGAATTACAACTTCGCAAC 58.885 37.037 6.78 0.00 0.00 4.17
4092 8602 5.293569 GTGGGTATTTCTATCAAGTGTTCCG 59.706 44.000 0.00 0.00 0.00 4.30
4101 8611 7.827819 TCTATCAAGTGTTCCGAATTTACTG 57.172 36.000 0.00 0.00 0.00 2.74
4290 8800 3.868757 TGTCTCTGATTGAACTACCCG 57.131 47.619 0.00 0.00 0.00 5.28
4301 8811 1.464608 GAACTACCCGGTTTAAACGCC 59.535 52.381 12.07 0.00 0.00 5.68
4322 8832 7.494211 ACGCCTATTACAGAAATACATGTACA 58.506 34.615 7.96 0.00 31.83 2.90
4414 8928 1.086696 CGCAGGTCAACGGAAATGAT 58.913 50.000 0.00 0.00 0.00 2.45
4442 8959 4.929808 GTGGATTGTATGATTAGGCCTACG 59.070 45.833 13.46 0.00 0.00 3.51
4486 9003 1.876799 CACCATAAACAAGCACGACCA 59.123 47.619 0.00 0.00 0.00 4.02
4656 9173 5.359009 GTCAACAAGTGGATGAATGGATGAT 59.641 40.000 0.00 0.00 0.00 2.45
4664 9181 8.951614 AGTGGATGAATGGATGATAATTCAAT 57.048 30.769 6.99 0.00 43.86 2.57
4843 9381 6.422100 GCATATCACTAGTGACGATTCAATGT 59.578 38.462 27.41 10.30 43.11 2.71
4964 9502 8.893727 AGAATGCATAGACTTGTTGGTTAATAC 58.106 33.333 0.00 0.00 0.00 1.89
4965 9503 8.807948 AATGCATAGACTTGTTGGTTAATACT 57.192 30.769 0.00 0.00 0.00 2.12
4966 9504 7.843490 TGCATAGACTTGTTGGTTAATACTC 57.157 36.000 0.00 0.00 0.00 2.59
4967 9505 7.620880 TGCATAGACTTGTTGGTTAATACTCT 58.379 34.615 0.00 0.00 0.00 3.24
4968 9506 8.755028 TGCATAGACTTGTTGGTTAATACTCTA 58.245 33.333 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.304180 AGTAGGAGATGCAGTGCTGTTT 59.696 45.455 17.60 0.00 0.00 2.83
1 2 1.905215 AGTAGGAGATGCAGTGCTGTT 59.095 47.619 17.60 0.67 0.00 3.16
2 3 1.566211 AGTAGGAGATGCAGTGCTGT 58.434 50.000 17.60 4.86 0.00 4.40
3 4 2.687700 AAGTAGGAGATGCAGTGCTG 57.312 50.000 17.60 0.00 0.00 4.41
4 5 3.370104 AGTAAGTAGGAGATGCAGTGCT 58.630 45.455 17.60 1.28 0.00 4.40
5 6 3.810310 AGTAAGTAGGAGATGCAGTGC 57.190 47.619 8.58 8.58 0.00 4.40
6 7 3.868077 GCAAGTAAGTAGGAGATGCAGTG 59.132 47.826 0.00 0.00 32.80 3.66
7 8 3.118592 GGCAAGTAAGTAGGAGATGCAGT 60.119 47.826 0.00 0.00 34.14 4.40
8 9 3.462021 GGCAAGTAAGTAGGAGATGCAG 58.538 50.000 0.00 0.00 34.14 4.41
9 10 2.170607 GGGCAAGTAAGTAGGAGATGCA 59.829 50.000 0.00 0.00 34.14 3.96
10 11 2.485657 GGGGCAAGTAAGTAGGAGATGC 60.486 54.545 0.00 0.00 0.00 3.91
11 12 3.041946 AGGGGCAAGTAAGTAGGAGATG 58.958 50.000 0.00 0.00 0.00 2.90
12 13 3.423058 AGGGGCAAGTAAGTAGGAGAT 57.577 47.619 0.00 0.00 0.00 2.75
13 14 2.942604 AGGGGCAAGTAAGTAGGAGA 57.057 50.000 0.00 0.00 0.00 3.71
14 15 3.244249 GCATAGGGGCAAGTAAGTAGGAG 60.244 52.174 0.00 0.00 0.00 3.69
15 16 2.704065 GCATAGGGGCAAGTAAGTAGGA 59.296 50.000 0.00 0.00 0.00 2.94
16 17 2.706190 AGCATAGGGGCAAGTAAGTAGG 59.294 50.000 0.00 0.00 35.83 3.18
17 18 3.388024 TGAGCATAGGGGCAAGTAAGTAG 59.612 47.826 0.00 0.00 35.83 2.57
18 19 3.380393 TGAGCATAGGGGCAAGTAAGTA 58.620 45.455 0.00 0.00 35.83 2.24
19 20 2.196595 TGAGCATAGGGGCAAGTAAGT 58.803 47.619 0.00 0.00 35.83 2.24
20 21 3.118261 TCTTGAGCATAGGGGCAAGTAAG 60.118 47.826 0.00 0.00 38.95 2.34
21 22 2.843730 TCTTGAGCATAGGGGCAAGTAA 59.156 45.455 0.00 0.00 38.95 2.24
22 23 2.435805 CTCTTGAGCATAGGGGCAAGTA 59.564 50.000 0.00 0.00 38.95 2.24
23 24 1.211457 CTCTTGAGCATAGGGGCAAGT 59.789 52.381 0.00 0.00 38.95 3.16
24 25 1.964552 CTCTTGAGCATAGGGGCAAG 58.035 55.000 0.00 0.00 39.17 4.01
25 26 0.107017 GCTCTTGAGCATAGGGGCAA 60.107 55.000 16.71 0.00 35.83 4.52
26 27 0.984961 AGCTCTTGAGCATAGGGGCA 60.985 55.000 22.44 0.00 37.25 5.36
27 28 1.051812 TAGCTCTTGAGCATAGGGGC 58.948 55.000 22.44 0.00 37.25 5.80
28 29 2.027377 CCATAGCTCTTGAGCATAGGGG 60.027 54.545 22.44 12.88 37.25 4.79
29 30 2.027377 CCCATAGCTCTTGAGCATAGGG 60.027 54.545 22.44 22.32 37.25 3.53
30 31 2.636893 ACCCATAGCTCTTGAGCATAGG 59.363 50.000 22.44 18.46 37.25 2.57
31 32 4.063689 CAACCCATAGCTCTTGAGCATAG 58.936 47.826 22.44 11.84 37.25 2.23
32 33 3.745480 GCAACCCATAGCTCTTGAGCATA 60.745 47.826 22.44 12.85 37.25 3.14
33 34 2.928334 CAACCCATAGCTCTTGAGCAT 58.072 47.619 22.44 12.01 37.25 3.79
34 35 1.679944 GCAACCCATAGCTCTTGAGCA 60.680 52.381 22.44 10.42 37.25 4.26
35 36 1.020437 GCAACCCATAGCTCTTGAGC 58.980 55.000 14.16 14.16 0.00 4.26
36 37 2.286872 CAGCAACCCATAGCTCTTGAG 58.713 52.381 0.00 0.00 39.50 3.02
37 38 1.679944 GCAGCAACCCATAGCTCTTGA 60.680 52.381 0.00 0.00 39.50 3.02
38 39 0.737219 GCAGCAACCCATAGCTCTTG 59.263 55.000 0.00 0.00 39.50 3.02
39 40 0.394899 GGCAGCAACCCATAGCTCTT 60.395 55.000 0.00 0.00 39.50 2.85
40 41 1.225704 GGCAGCAACCCATAGCTCT 59.774 57.895 0.00 0.00 39.50 4.09
41 42 3.833304 GGCAGCAACCCATAGCTC 58.167 61.111 0.00 0.00 39.50 4.09
49 50 2.985847 AAGCTTCGGGCAGCAACC 60.986 61.111 0.00 0.00 42.84 3.77
50 51 2.256461 CAAGCTTCGGGCAGCAAC 59.744 61.111 0.00 0.00 42.84 4.17
51 52 3.673484 GCAAGCTTCGGGCAGCAA 61.673 61.111 0.00 0.00 42.84 3.91
52 53 4.953010 TGCAAGCTTCGGGCAGCA 62.953 61.111 5.88 4.43 46.41 4.41
53 54 4.410743 GTGCAAGCTTCGGGCAGC 62.411 66.667 9.98 3.85 44.79 5.25
54 55 2.263741 AAGTGCAAGCTTCGGGCAG 61.264 57.895 9.98 0.00 44.79 4.85
55 56 2.203337 AAGTGCAAGCTTCGGGCA 60.203 55.556 5.88 5.88 44.79 5.36
56 57 2.256461 CAAGTGCAAGCTTCGGGC 59.744 61.111 0.00 0.00 42.19 6.13
57 58 2.256461 GCAAGTGCAAGCTTCGGG 59.744 61.111 0.00 0.00 41.59 5.14
58 59 2.127118 CGCAAGTGCAAGCTTCGG 60.127 61.111 0.00 0.00 42.21 4.30
59 60 1.154525 CTCGCAAGTGCAAGCTTCG 60.155 57.895 0.00 0.00 42.21 3.79
60 61 0.308993 AACTCGCAAGTGCAAGCTTC 59.691 50.000 0.00 0.00 42.21 3.86
61 62 0.029834 CAACTCGCAAGTGCAAGCTT 59.970 50.000 3.87 0.00 42.21 3.74
62 63 1.650912 CAACTCGCAAGTGCAAGCT 59.349 52.632 3.87 0.00 42.21 3.74
63 64 2.012948 GCAACTCGCAAGTGCAAGC 61.013 57.895 3.87 0.00 42.21 4.01
64 65 0.659417 CAGCAACTCGCAAGTGCAAG 60.659 55.000 3.87 0.00 46.13 4.01
65 66 1.094650 TCAGCAACTCGCAAGTGCAA 61.095 50.000 3.87 0.00 46.13 4.08
66 67 1.094650 TTCAGCAACTCGCAAGTGCA 61.095 50.000 3.87 0.00 46.13 4.57
67 68 0.029300 TTTCAGCAACTCGCAAGTGC 59.971 50.000 0.00 0.00 46.13 4.40
68 69 2.693797 ATTTCAGCAACTCGCAAGTG 57.306 45.000 0.00 0.00 46.13 3.16
69 70 2.859806 GCAATTTCAGCAACTCGCAAGT 60.860 45.455 0.00 0.00 46.13 3.16
70 71 1.717645 GCAATTTCAGCAACTCGCAAG 59.282 47.619 0.00 0.00 46.13 4.01
71 72 1.066757 TGCAATTTCAGCAACTCGCAA 59.933 42.857 0.00 0.00 46.13 4.85
72 73 0.667453 TGCAATTTCAGCAACTCGCA 59.333 45.000 0.00 0.00 46.13 5.10
73 74 1.055338 GTGCAATTTCAGCAACTCGC 58.945 50.000 0.00 0.00 44.64 5.03
74 75 2.313234 CAGTGCAATTTCAGCAACTCG 58.687 47.619 0.00 0.00 44.64 4.18
75 76 2.608752 CCCAGTGCAATTTCAGCAACTC 60.609 50.000 0.00 0.00 44.64 3.01
76 77 1.342174 CCCAGTGCAATTTCAGCAACT 59.658 47.619 0.00 0.00 44.64 3.16
77 78 1.069049 ACCCAGTGCAATTTCAGCAAC 59.931 47.619 0.00 0.00 44.64 4.17
78 79 1.068895 CACCCAGTGCAATTTCAGCAA 59.931 47.619 0.00 0.00 44.64 3.91
79 80 0.675083 CACCCAGTGCAATTTCAGCA 59.325 50.000 0.00 0.00 40.19 4.41
80 81 3.502237 CACCCAGTGCAATTTCAGC 57.498 52.632 0.00 0.00 0.00 4.26
90 91 0.962356 GATGGAGGTTGCACCCAGTG 60.962 60.000 2.00 0.00 39.75 3.66
91 92 1.380302 GATGGAGGTTGCACCCAGT 59.620 57.895 2.00 0.00 39.75 4.00
92 93 1.379044 GGATGGAGGTTGCACCCAG 60.379 63.158 2.00 0.00 39.75 4.45
93 94 2.763215 GGATGGAGGTTGCACCCA 59.237 61.111 2.00 0.62 39.75 4.51
94 95 2.438434 CGGATGGAGGTTGCACCC 60.438 66.667 0.00 0.00 39.75 4.61
95 96 3.134127 GCGGATGGAGGTTGCACC 61.134 66.667 0.00 0.00 38.99 5.01
96 97 2.045926 AGCGGATGGAGGTTGCAC 60.046 61.111 0.00 0.00 0.00 4.57
97 98 1.841302 AAGAGCGGATGGAGGTTGCA 61.841 55.000 0.00 0.00 0.00 4.08
98 99 1.078143 AAGAGCGGATGGAGGTTGC 60.078 57.895 0.00 0.00 0.00 4.17
99 100 0.745845 CCAAGAGCGGATGGAGGTTG 60.746 60.000 0.00 0.00 39.12 3.77
100 101 1.201429 ACCAAGAGCGGATGGAGGTT 61.201 55.000 11.01 0.00 39.12 3.50
101 102 1.613630 ACCAAGAGCGGATGGAGGT 60.614 57.895 11.01 0.00 39.12 3.85
102 103 1.153289 CACCAAGAGCGGATGGAGG 60.153 63.158 11.01 0.00 39.12 4.30
103 104 1.153289 CCACCAAGAGCGGATGGAG 60.153 63.158 11.01 3.92 39.12 3.86
104 105 2.989639 CCACCAAGAGCGGATGGA 59.010 61.111 11.01 0.00 39.12 3.41
105 106 2.825836 GCCACCAAGAGCGGATGG 60.826 66.667 3.54 3.54 42.60 3.51
111 112 0.733909 GATTTTGCGCCACCAAGAGC 60.734 55.000 4.18 0.00 0.00 4.09
112 113 0.597568 TGATTTTGCGCCACCAAGAG 59.402 50.000 4.18 0.00 0.00 2.85
113 114 1.035923 TTGATTTTGCGCCACCAAGA 58.964 45.000 4.18 0.00 0.00 3.02
114 115 1.139163 GTTGATTTTGCGCCACCAAG 58.861 50.000 4.18 0.00 0.00 3.61
115 116 0.461548 TGTTGATTTTGCGCCACCAA 59.538 45.000 4.18 0.00 0.00 3.67
116 117 0.249238 GTGTTGATTTTGCGCCACCA 60.249 50.000 4.18 0.00 0.00 4.17
117 118 0.943835 GGTGTTGATTTTGCGCCACC 60.944 55.000 4.18 8.83 35.99 4.61
118 119 1.274798 CGGTGTTGATTTTGCGCCAC 61.275 55.000 4.18 2.34 33.35 5.01
119 120 1.007964 CGGTGTTGATTTTGCGCCA 60.008 52.632 4.18 0.00 33.35 5.69
120 121 1.732683 CCGGTGTTGATTTTGCGCC 60.733 57.895 4.18 0.00 0.00 6.53
121 122 1.007849 ACCGGTGTTGATTTTGCGC 60.008 52.632 6.12 0.00 0.00 6.09
122 123 0.030101 ACACCGGTGTTGATTTTGCG 59.970 50.000 34.41 6.50 41.83 4.85
123 124 3.957383 ACACCGGTGTTGATTTTGC 57.043 47.368 34.41 0.00 41.83 3.68
133 134 0.960364 CATCCTTGGGAACACCGGTG 60.960 60.000 32.83 32.83 44.64 4.94
134 135 1.378762 CATCCTTGGGAACACCGGT 59.621 57.895 0.00 0.00 44.64 5.28
135 136 2.046285 GCATCCTTGGGAACACCGG 61.046 63.158 0.00 0.00 44.64 5.28
136 137 2.398554 CGCATCCTTGGGAACACCG 61.399 63.158 0.00 0.00 44.64 4.94
137 138 2.700773 GCGCATCCTTGGGAACACC 61.701 63.158 0.30 0.00 42.67 4.16
138 139 2.877691 GCGCATCCTTGGGAACAC 59.122 61.111 0.30 0.00 42.67 3.32
139 140 2.745884 CGCGCATCCTTGGGAACA 60.746 61.111 8.75 0.00 38.00 3.18
140 141 4.179579 GCGCGCATCCTTGGGAAC 62.180 66.667 29.10 0.00 38.00 3.62
145 146 3.672255 CTTGTGGCGCGCATCCTTG 62.672 63.158 34.42 13.87 0.00 3.61
146 147 3.434319 CTTGTGGCGCGCATCCTT 61.434 61.111 34.42 0.00 0.00 3.36
149 150 4.824166 CTGCTTGTGGCGCGCATC 62.824 66.667 34.42 24.06 45.43 3.91
163 164 2.980233 ACAGCAAAGCGGACCTGC 60.980 61.111 0.00 0.00 36.29 4.85
164 165 0.602638 TACACAGCAAAGCGGACCTG 60.603 55.000 0.00 0.00 0.00 4.00
165 166 0.602905 GTACACAGCAAAGCGGACCT 60.603 55.000 0.00 0.00 0.00 3.85
166 167 0.882927 TGTACACAGCAAAGCGGACC 60.883 55.000 0.00 0.00 0.00 4.46
167 168 1.156736 ATGTACACAGCAAAGCGGAC 58.843 50.000 0.00 0.00 0.00 4.79
168 169 1.535028 CAATGTACACAGCAAAGCGGA 59.465 47.619 0.00 0.00 0.00 5.54
169 170 1.967762 CAATGTACACAGCAAAGCGG 58.032 50.000 0.00 0.00 0.00 5.52
170 171 1.330306 GCAATGTACACAGCAAAGCG 58.670 50.000 14.56 0.00 0.00 4.68
171 172 1.270550 AGGCAATGTACACAGCAAAGC 59.729 47.619 19.41 7.34 0.00 3.51
172 173 2.352030 CCAGGCAATGTACACAGCAAAG 60.352 50.000 19.41 10.28 0.00 2.77
173 174 1.612950 CCAGGCAATGTACACAGCAAA 59.387 47.619 19.41 0.00 0.00 3.68
174 175 1.202867 TCCAGGCAATGTACACAGCAA 60.203 47.619 19.41 3.36 0.00 3.91
175 176 0.399833 TCCAGGCAATGTACACAGCA 59.600 50.000 19.41 0.60 0.00 4.41
176 177 1.200020 GTTCCAGGCAATGTACACAGC 59.800 52.381 11.80 11.80 0.00 4.40
177 178 2.503331 TGTTCCAGGCAATGTACACAG 58.497 47.619 0.00 0.00 0.00 3.66
178 179 2.647683 TGTTCCAGGCAATGTACACA 57.352 45.000 0.00 0.00 0.00 3.72
179 180 4.236935 CAAATGTTCCAGGCAATGTACAC 58.763 43.478 0.00 0.00 0.00 2.90
180 181 3.257873 CCAAATGTTCCAGGCAATGTACA 59.742 43.478 0.00 0.00 0.00 2.90
181 182 3.509575 TCCAAATGTTCCAGGCAATGTAC 59.490 43.478 0.00 0.00 0.00 2.90
182 183 3.772387 TCCAAATGTTCCAGGCAATGTA 58.228 40.909 0.00 0.00 0.00 2.29
183 184 2.607499 TCCAAATGTTCCAGGCAATGT 58.393 42.857 0.00 0.00 0.00 2.71
184 185 3.592059 CTTCCAAATGTTCCAGGCAATG 58.408 45.455 0.00 0.00 0.00 2.82
185 186 2.568509 CCTTCCAAATGTTCCAGGCAAT 59.431 45.455 0.00 0.00 0.00 3.56
186 187 1.969923 CCTTCCAAATGTTCCAGGCAA 59.030 47.619 0.00 0.00 0.00 4.52
187 188 1.146774 TCCTTCCAAATGTTCCAGGCA 59.853 47.619 0.00 0.00 0.00 4.75
188 189 1.821136 CTCCTTCCAAATGTTCCAGGC 59.179 52.381 0.00 0.00 0.00 4.85
189 190 1.821136 GCTCCTTCCAAATGTTCCAGG 59.179 52.381 0.00 0.00 0.00 4.45
190 191 1.470098 CGCTCCTTCCAAATGTTCCAG 59.530 52.381 0.00 0.00 0.00 3.86
191 192 1.533625 CGCTCCTTCCAAATGTTCCA 58.466 50.000 0.00 0.00 0.00 3.53
192 193 0.811281 CCGCTCCTTCCAAATGTTCC 59.189 55.000 0.00 0.00 0.00 3.62
193 194 1.821216 TCCGCTCCTTCCAAATGTTC 58.179 50.000 0.00 0.00 0.00 3.18
194 195 1.886542 GTTCCGCTCCTTCCAAATGTT 59.113 47.619 0.00 0.00 0.00 2.71
195 196 1.534729 GTTCCGCTCCTTCCAAATGT 58.465 50.000 0.00 0.00 0.00 2.71
196 197 0.811281 GGTTCCGCTCCTTCCAAATG 59.189 55.000 0.00 0.00 0.00 2.32
197 198 0.676782 CGGTTCCGCTCCTTCCAAAT 60.677 55.000 0.00 0.00 0.00 2.32
198 199 1.302192 CGGTTCCGCTCCTTCCAAA 60.302 57.895 0.00 0.00 0.00 3.28
199 200 2.345991 CGGTTCCGCTCCTTCCAA 59.654 61.111 0.00 0.00 0.00 3.53
200 201 2.920912 ACGGTTCCGCTCCTTCCA 60.921 61.111 11.32 0.00 0.00 3.53
201 202 2.125633 GACGGTTCCGCTCCTTCC 60.126 66.667 11.32 0.00 0.00 3.46
202 203 2.506438 CGACGGTTCCGCTCCTTC 60.506 66.667 11.32 0.31 0.00 3.46
209 210 2.169327 GAAAACGCGACGGTTCCG 59.831 61.111 15.93 9.81 34.97 4.30
210 211 2.166584 CTGGAAAACGCGACGGTTCC 62.167 60.000 15.93 18.88 41.91 3.62
211 212 1.203313 CTGGAAAACGCGACGGTTC 59.797 57.895 15.93 10.08 34.97 3.62
212 213 2.248835 CCTGGAAAACGCGACGGTT 61.249 57.895 15.93 0.00 38.92 4.44
213 214 2.663852 CCTGGAAAACGCGACGGT 60.664 61.111 15.93 0.00 0.00 4.83
214 215 4.084888 GCCTGGAAAACGCGACGG 62.085 66.667 15.93 2.84 0.00 4.79
219 220 0.039527 ATTTGTCGCCTGGAAAACGC 60.040 50.000 0.00 0.00 0.00 4.84
220 221 1.685302 CATTTGTCGCCTGGAAAACG 58.315 50.000 0.00 0.00 0.00 3.60
221 222 1.418373 GCATTTGTCGCCTGGAAAAC 58.582 50.000 0.00 0.00 0.00 2.43
222 223 0.039617 CGCATTTGTCGCCTGGAAAA 60.040 50.000 0.00 0.00 0.00 2.29
223 224 1.578926 CGCATTTGTCGCCTGGAAA 59.421 52.632 0.00 0.00 0.00 3.13
224 225 2.976840 GCGCATTTGTCGCCTGGAA 61.977 57.895 0.30 0.00 46.18 3.53
225 226 3.430862 GCGCATTTGTCGCCTGGA 61.431 61.111 0.30 0.00 46.18 3.86
231 232 2.480555 GGACCTGCGCATTTGTCG 59.519 61.111 12.24 0.00 0.00 4.35
232 233 1.523154 TTGGGACCTGCGCATTTGTC 61.523 55.000 12.24 17.71 39.39 3.18
233 234 1.530419 TTGGGACCTGCGCATTTGT 60.530 52.632 12.24 9.06 39.39 2.83
234 235 1.080569 GTTGGGACCTGCGCATTTG 60.081 57.895 12.24 5.22 39.39 2.32
235 236 2.275380 GGTTGGGACCTGCGCATTT 61.275 57.895 12.24 0.00 42.99 2.32
236 237 2.676471 GGTTGGGACCTGCGCATT 60.676 61.111 12.24 0.00 42.99 3.56
237 238 2.786512 AATGGTTGGGACCTGCGCAT 62.787 55.000 12.24 0.00 46.66 4.73
238 239 2.992817 AAATGGTTGGGACCTGCGCA 62.993 55.000 10.98 10.98 46.66 6.09
239 240 1.815817 AAAATGGTTGGGACCTGCGC 61.816 55.000 0.00 0.00 46.66 6.09
240 241 0.038343 CAAAATGGTTGGGACCTGCG 60.038 55.000 0.00 0.00 46.66 5.18
241 242 0.320683 GCAAAATGGTTGGGACCTGC 60.321 55.000 0.00 0.00 46.66 4.85
242 243 1.001181 CTGCAAAATGGTTGGGACCTG 59.999 52.381 0.00 0.00 46.66 4.00
243 244 1.341080 CTGCAAAATGGTTGGGACCT 58.659 50.000 0.00 0.00 46.66 3.85
244 245 0.320683 GCTGCAAAATGGTTGGGACC 60.321 55.000 0.00 0.00 46.71 4.46
245 246 0.681175 AGCTGCAAAATGGTTGGGAC 59.319 50.000 1.02 0.00 0.00 4.46
246 247 1.070445 CAAGCTGCAAAATGGTTGGGA 59.930 47.619 1.02 0.00 37.83 4.37
247 248 1.202675 ACAAGCTGCAAAATGGTTGGG 60.203 47.619 16.81 0.00 43.40 4.12
248 249 1.868498 CACAAGCTGCAAAATGGTTGG 59.132 47.619 16.81 5.54 43.40 3.77
249 250 2.823984 TCACAAGCTGCAAAATGGTTG 58.176 42.857 12.47 12.47 44.29 3.77
250 251 3.460103 CTTCACAAGCTGCAAAATGGTT 58.540 40.909 1.02 0.00 0.00 3.67
251 252 2.224113 CCTTCACAAGCTGCAAAATGGT 60.224 45.455 1.02 0.00 0.00 3.55
252 253 2.036217 TCCTTCACAAGCTGCAAAATGG 59.964 45.455 1.02 0.00 0.00 3.16
253 254 3.374220 TCCTTCACAAGCTGCAAAATG 57.626 42.857 1.02 0.00 0.00 2.32
254 255 3.575256 TCATCCTTCACAAGCTGCAAAAT 59.425 39.130 1.02 0.00 0.00 1.82
255 256 2.957680 TCATCCTTCACAAGCTGCAAAA 59.042 40.909 1.02 0.00 0.00 2.44
256 257 2.555325 CTCATCCTTCACAAGCTGCAAA 59.445 45.455 1.02 0.00 0.00 3.68
257 258 2.156917 CTCATCCTTCACAAGCTGCAA 58.843 47.619 1.02 0.00 0.00 4.08
258 259 1.348696 TCTCATCCTTCACAAGCTGCA 59.651 47.619 1.02 0.00 0.00 4.41
259 260 2.105006 TCTCATCCTTCACAAGCTGC 57.895 50.000 0.00 0.00 0.00 5.25
260 261 3.377485 CCAATCTCATCCTTCACAAGCTG 59.623 47.826 0.00 0.00 0.00 4.24
261 262 3.618351 CCAATCTCATCCTTCACAAGCT 58.382 45.455 0.00 0.00 0.00 3.74
262 263 2.098770 GCCAATCTCATCCTTCACAAGC 59.901 50.000 0.00 0.00 0.00 4.01
263 264 2.686915 GGCCAATCTCATCCTTCACAAG 59.313 50.000 0.00 0.00 0.00 3.16
264 265 2.309755 AGGCCAATCTCATCCTTCACAA 59.690 45.455 5.01 0.00 0.00 3.33
265 266 1.918262 AGGCCAATCTCATCCTTCACA 59.082 47.619 5.01 0.00 0.00 3.58
266 267 2.570135 GAGGCCAATCTCATCCTTCAC 58.430 52.381 5.01 0.00 34.13 3.18
267 268 1.492176 GGAGGCCAATCTCATCCTTCA 59.508 52.381 5.01 0.00 35.58 3.02
268 269 1.773653 AGGAGGCCAATCTCATCCTTC 59.226 52.381 5.01 0.00 37.05 3.46
269 270 1.493871 CAGGAGGCCAATCTCATCCTT 59.506 52.381 5.01 0.00 38.34 3.36
270 271 1.138568 CAGGAGGCCAATCTCATCCT 58.861 55.000 5.01 3.00 41.08 3.24
271 272 0.536915 GCAGGAGGCCAATCTCATCC 60.537 60.000 5.01 0.00 35.58 3.51
272 273 0.182061 TGCAGGAGGCCAATCTCATC 59.818 55.000 5.01 0.00 43.89 2.92
273 274 0.183014 CTGCAGGAGGCCAATCTCAT 59.817 55.000 5.01 0.00 43.89 2.90
274 275 1.605992 CTGCAGGAGGCCAATCTCA 59.394 57.895 5.01 0.00 43.89 3.27
275 276 1.153005 CCTGCAGGAGGCCAATCTC 60.153 63.158 29.88 0.00 43.89 2.75
276 277 1.617536 TCCTGCAGGAGGCCAATCT 60.618 57.895 32.00 0.00 42.47 2.40
277 278 3.001514 TCCTGCAGGAGGCCAATC 58.998 61.111 32.00 0.00 42.47 2.67
290 291 3.847602 CTCCCGAGCTGCCTCCTG 61.848 72.222 0.00 0.00 34.49 3.86
291 292 2.920076 CTACTCCCGAGCTGCCTCCT 62.920 65.000 0.00 0.00 34.49 3.69
292 293 2.442272 TACTCCCGAGCTGCCTCC 60.442 66.667 0.00 0.00 34.49 4.30
293 294 1.324005 AACTACTCCCGAGCTGCCTC 61.324 60.000 0.00 0.00 34.66 4.70
294 295 1.305381 AACTACTCCCGAGCTGCCT 60.305 57.895 0.00 0.00 0.00 4.75
295 296 1.153549 CAACTACTCCCGAGCTGCC 60.154 63.158 0.00 0.00 0.00 4.85
296 297 0.037232 AACAACTACTCCCGAGCTGC 60.037 55.000 0.00 0.00 0.00 5.25
297 298 1.000955 ACAACAACTACTCCCGAGCTG 59.999 52.381 0.00 0.00 0.00 4.24
298 299 1.000955 CACAACAACTACTCCCGAGCT 59.999 52.381 0.00 0.00 0.00 4.09
299 300 1.270147 ACACAACAACTACTCCCGAGC 60.270 52.381 0.00 0.00 0.00 5.03
300 301 2.223971 ACACACAACAACTACTCCCGAG 60.224 50.000 0.00 0.00 0.00 4.63
301 302 1.758280 ACACACAACAACTACTCCCGA 59.242 47.619 0.00 0.00 0.00 5.14
302 303 2.234300 ACACACAACAACTACTCCCG 57.766 50.000 0.00 0.00 0.00 5.14
303 304 4.056050 CACTACACACAACAACTACTCCC 58.944 47.826 0.00 0.00 0.00 4.30
304 305 4.056050 CCACTACACACAACAACTACTCC 58.944 47.826 0.00 0.00 0.00 3.85
305 306 4.056050 CCCACTACACACAACAACTACTC 58.944 47.826 0.00 0.00 0.00 2.59
306 307 3.181458 CCCCACTACACACAACAACTACT 60.181 47.826 0.00 0.00 0.00 2.57
307 308 3.135994 CCCCACTACACACAACAACTAC 58.864 50.000 0.00 0.00 0.00 2.73
308 309 2.773087 ACCCCACTACACACAACAACTA 59.227 45.455 0.00 0.00 0.00 2.24
309 310 1.562475 ACCCCACTACACACAACAACT 59.438 47.619 0.00 0.00 0.00 3.16
310 311 1.673920 CACCCCACTACACACAACAAC 59.326 52.381 0.00 0.00 0.00 3.32
311 312 1.408961 CCACCCCACTACACACAACAA 60.409 52.381 0.00 0.00 0.00 2.83
312 313 0.181587 CCACCCCACTACACACAACA 59.818 55.000 0.00 0.00 0.00 3.33
313 314 0.181824 ACCACCCCACTACACACAAC 59.818 55.000 0.00 0.00 0.00 3.32
314 315 0.470766 GACCACCCCACTACACACAA 59.529 55.000 0.00 0.00 0.00 3.33
315 316 0.691413 TGACCACCCCACTACACACA 60.691 55.000 0.00 0.00 0.00 3.72
316 317 0.034896 CTGACCACCCCACTACACAC 59.965 60.000 0.00 0.00 0.00 3.82
317 318 1.764571 GCTGACCACCCCACTACACA 61.765 60.000 0.00 0.00 0.00 3.72
318 319 1.003718 GCTGACCACCCCACTACAC 60.004 63.158 0.00 0.00 0.00 2.90
319 320 2.221299 GGCTGACCACCCCACTACA 61.221 63.158 0.00 0.00 35.26 2.74
320 321 2.669240 GGCTGACCACCCCACTAC 59.331 66.667 0.00 0.00 35.26 2.73
321 322 2.609610 GGGCTGACCACCCCACTA 60.610 66.667 0.00 0.00 42.01 2.74
326 327 1.384643 AGATAGGGGCTGACCACCC 60.385 63.158 0.00 0.00 42.21 4.61
327 328 0.691078 TCAGATAGGGGCTGACCACC 60.691 60.000 0.00 0.00 42.21 4.61
328 329 1.346068 GATCAGATAGGGGCTGACCAC 59.654 57.143 0.00 0.00 44.39 4.16
329 330 1.062198 TGATCAGATAGGGGCTGACCA 60.062 52.381 0.00 0.00 44.39 4.02
330 331 1.722034 TGATCAGATAGGGGCTGACC 58.278 55.000 0.00 0.00 44.39 4.02
331 332 2.902486 TCATGATCAGATAGGGGCTGAC 59.098 50.000 0.09 0.00 44.39 3.51
332 333 3.264922 TCATGATCAGATAGGGGCTGA 57.735 47.619 0.09 0.00 45.52 4.26
333 334 4.225492 AGAATCATGATCAGATAGGGGCTG 59.775 45.833 9.06 0.00 34.71 4.85
334 335 4.437023 AGAATCATGATCAGATAGGGGCT 58.563 43.478 9.06 0.00 0.00 5.19
335 336 4.470664 AGAGAATCATGATCAGATAGGGGC 59.529 45.833 9.06 0.00 37.82 5.80
336 337 7.124721 TCTAGAGAATCATGATCAGATAGGGG 58.875 42.308 9.06 0.00 37.82 4.79
337 338 8.469200 GTTCTAGAGAATCATGATCAGATAGGG 58.531 40.741 9.06 0.00 37.82 3.53
338 339 9.246670 AGTTCTAGAGAATCATGATCAGATAGG 57.753 37.037 9.06 0.00 37.82 2.57
341 342 9.145442 TGAAGTTCTAGAGAATCATGATCAGAT 57.855 33.333 9.06 1.79 37.82 2.90
342 343 8.530804 TGAAGTTCTAGAGAATCATGATCAGA 57.469 34.615 9.06 4.52 37.82 3.27
343 344 8.415553 ACTGAAGTTCTAGAGAATCATGATCAG 58.584 37.037 9.06 10.21 37.82 2.90
344 345 8.303780 ACTGAAGTTCTAGAGAATCATGATCA 57.696 34.615 9.06 0.00 37.82 2.92
361 362 8.652290 AGTTATAGAGAAAGGTGAACTGAAGTT 58.348 33.333 0.00 0.00 41.64 2.66
362 363 8.196378 AGTTATAGAGAAAGGTGAACTGAAGT 57.804 34.615 0.00 0.00 0.00 3.01
363 364 8.527810 AGAGTTATAGAGAAAGGTGAACTGAAG 58.472 37.037 0.00 0.00 0.00 3.02
364 365 8.307483 CAGAGTTATAGAGAAAGGTGAACTGAA 58.693 37.037 0.00 0.00 0.00 3.02
365 366 7.451877 ACAGAGTTATAGAGAAAGGTGAACTGA 59.548 37.037 0.00 0.00 0.00 3.41
366 367 7.607250 ACAGAGTTATAGAGAAAGGTGAACTG 58.393 38.462 0.00 0.00 0.00 3.16
367 368 7.784470 ACAGAGTTATAGAGAAAGGTGAACT 57.216 36.000 0.00 0.00 0.00 3.01
377 378 9.404848 TCGGAAAGAATTACAGAGTTATAGAGA 57.595 33.333 0.00 0.00 0.00 3.10
387 388 9.424319 GCATTATAGATCGGAAAGAATTACAGA 57.576 33.333 0.00 0.00 0.00 3.41
388 389 9.208022 TGCATTATAGATCGGAAAGAATTACAG 57.792 33.333 0.00 0.00 0.00 2.74
389 390 9.554395 TTGCATTATAGATCGGAAAGAATTACA 57.446 29.630 0.00 0.00 0.00 2.41
392 393 8.517878 CCATTGCATTATAGATCGGAAAGAATT 58.482 33.333 0.00 0.00 0.00 2.17
393 394 7.362401 GCCATTGCATTATAGATCGGAAAGAAT 60.362 37.037 0.00 0.00 37.47 2.40
394 395 6.072508 GCCATTGCATTATAGATCGGAAAGAA 60.073 38.462 0.00 0.00 37.47 2.52
395 396 5.412594 GCCATTGCATTATAGATCGGAAAGA 59.587 40.000 0.00 0.00 37.47 2.52
396 397 5.181811 TGCCATTGCATTATAGATCGGAAAG 59.818 40.000 0.00 0.00 44.23 2.62
397 398 5.069318 TGCCATTGCATTATAGATCGGAAA 58.931 37.500 0.00 0.00 44.23 3.13
398 399 4.650734 TGCCATTGCATTATAGATCGGAA 58.349 39.130 0.00 0.00 44.23 4.30
399 400 4.284829 TGCCATTGCATTATAGATCGGA 57.715 40.909 0.00 0.00 44.23 4.55
419 420 1.537202 CGGGAAAAGGCAGAAGTTCTG 59.463 52.381 25.68 25.68 46.90 3.02
420 421 1.143073 ACGGGAAAAGGCAGAAGTTCT 59.857 47.619 0.00 0.00 0.00 3.01
421 422 1.535896 GACGGGAAAAGGCAGAAGTTC 59.464 52.381 0.00 0.00 0.00 3.01
422 423 1.133915 TGACGGGAAAAGGCAGAAGTT 60.134 47.619 0.00 0.00 0.00 2.66
423 424 0.472471 TGACGGGAAAAGGCAGAAGT 59.528 50.000 0.00 0.00 0.00 3.01
424 425 1.604604 TTGACGGGAAAAGGCAGAAG 58.395 50.000 0.00 0.00 0.00 2.85
425 426 2.060050 TTTGACGGGAAAAGGCAGAA 57.940 45.000 0.00 0.00 0.00 3.02
426 427 1.953686 CTTTTGACGGGAAAAGGCAGA 59.046 47.619 11.44 0.00 38.68 4.26
427 428 1.681264 ACTTTTGACGGGAAAAGGCAG 59.319 47.619 19.41 2.65 44.11 4.85
428 429 1.770294 ACTTTTGACGGGAAAAGGCA 58.230 45.000 19.41 0.00 44.11 4.75
429 430 3.994204 TTACTTTTGACGGGAAAAGGC 57.006 42.857 19.41 0.00 44.11 4.35
430 431 6.079424 TGAATTACTTTTGACGGGAAAAGG 57.921 37.500 19.41 6.68 44.11 3.11
431 432 7.918562 TCTTTGAATTACTTTTGACGGGAAAAG 59.081 33.333 15.71 15.71 44.95 2.27
432 433 7.773149 TCTTTGAATTACTTTTGACGGGAAAA 58.227 30.769 0.00 0.00 0.00 2.29
433 434 7.336161 TCTTTGAATTACTTTTGACGGGAAA 57.664 32.000 0.00 0.00 0.00 3.13
434 435 6.945938 TCTTTGAATTACTTTTGACGGGAA 57.054 33.333 0.00 0.00 0.00 3.97
435 436 6.150474 GGATCTTTGAATTACTTTTGACGGGA 59.850 38.462 0.00 0.00 0.00 5.14
436 437 6.322491 GGATCTTTGAATTACTTTTGACGGG 58.678 40.000 0.00 0.00 0.00 5.28
437 438 6.072175 TGGGATCTTTGAATTACTTTTGACGG 60.072 38.462 0.00 0.00 0.00 4.79
438 439 6.908825 TGGGATCTTTGAATTACTTTTGACG 58.091 36.000 0.00 0.00 0.00 4.35
443 444 9.822185 GCAATATTGGGATCTTTGAATTACTTT 57.178 29.630 17.02 0.00 0.00 2.66
500 501 7.311092 TGTAATACGTCTTCCATTATGGGAT 57.689 36.000 11.76 0.00 38.32 3.85
510 511 6.399204 ACAAAACGATGTAATACGTCTTCC 57.601 37.500 10.50 0.00 41.87 3.46
511 512 6.245710 GCAACAAAACGATGTAATACGTCTTC 59.754 38.462 10.50 0.00 41.87 2.87
519 520 5.446143 TTCCAGCAACAAAACGATGTAAT 57.554 34.783 0.00 0.00 32.02 1.89
526 527 3.052036 CCTCAATTCCAGCAACAAAACG 58.948 45.455 0.00 0.00 0.00 3.60
544 545 1.179174 GGTTGGGGCACTTTGTCCTC 61.179 60.000 0.00 0.00 43.05 3.71
562 580 1.202154 CGGTGTTGACTAGACTAGCGG 60.202 57.143 9.52 0.00 0.00 5.52
572 590 1.485294 TATGGGCCACGGTGTTGACT 61.485 55.000 9.28 0.00 0.00 3.41
573 591 1.003112 TATGGGCCACGGTGTTGAC 60.003 57.895 9.28 0.00 0.00 3.18
574 592 1.195442 TCTATGGGCCACGGTGTTGA 61.195 55.000 9.28 0.00 0.00 3.18
575 593 0.322098 TTCTATGGGCCACGGTGTTG 60.322 55.000 9.28 0.00 0.00 3.33
584 602 6.071278 CCACTTCTATACTACTTCTATGGGCC 60.071 46.154 0.00 0.00 0.00 5.80
704 724 1.072331 ACAGTGACGGAGGCAAGATTT 59.928 47.619 0.00 0.00 0.00 2.17
705 725 0.687354 ACAGTGACGGAGGCAAGATT 59.313 50.000 0.00 0.00 0.00 2.40
918 938 2.655685 GCCGAATCTCGAGCCGAC 60.656 66.667 18.51 7.51 43.74 4.79
935 955 1.675310 TCACCGAATTGCCCTGCTG 60.675 57.895 0.00 0.00 0.00 4.41
1325 1363 1.373570 GTGAGGAAGCAATTCTCCGG 58.626 55.000 0.00 0.00 0.00 5.14
1490 1529 2.370189 GCAGGAGCAGGAGTGGTTATAT 59.630 50.000 0.00 0.00 41.58 0.86
1491 1530 1.762957 GCAGGAGCAGGAGTGGTTATA 59.237 52.381 0.00 0.00 41.58 0.98
1512 1551 4.460382 GGATGAAACACCAGAATGTGATGT 59.540 41.667 0.00 0.00 39.57 3.06
1628 1667 1.227497 GCTCTGCGGGATCCTCTTG 60.227 63.158 12.58 0.53 0.00 3.02
1811 3527 3.825160 TTCGGGGTGACACTGCAGC 62.825 63.158 15.27 0.00 35.63 5.25
1813 3529 1.691195 TTCTTCGGGGTGACACTGCA 61.691 55.000 5.39 0.00 0.00 4.41
2192 6468 1.112113 GATTGAGAGGTCGCCTGGTA 58.888 55.000 2.98 0.00 31.76 3.25
2214 6490 0.798776 CGGCTCTGTCAAATCGCTTT 59.201 50.000 0.00 0.00 0.00 3.51
2281 6557 4.552355 TGGTGTACATTGACGAGTACTTG 58.448 43.478 8.69 8.69 40.84 3.16
2356 6632 5.229423 ACAATGAAATGTTGCATGGTGTAC 58.771 37.500 0.00 0.00 27.83 2.90
2413 6689 1.532868 GTTCAACGTCAGCAGAAGCAT 59.467 47.619 0.00 0.00 45.49 3.79
2414 6690 0.937304 GTTCAACGTCAGCAGAAGCA 59.063 50.000 0.00 0.00 45.49 3.91
2416 6692 0.868406 GGGTTCAACGTCAGCAGAAG 59.132 55.000 0.00 0.00 0.00 2.85
2417 6693 0.179234 TGGGTTCAACGTCAGCAGAA 59.821 50.000 0.00 0.00 0.00 3.02
2433 6719 0.739112 GCTCTGCTCGAGAAAGTGGG 60.739 60.000 18.75 8.60 42.62 4.61
2439 6725 1.377366 CTACCCGCTCTGCTCGAGAA 61.377 60.000 18.75 4.16 42.62 2.87
2443 6729 2.103143 CACTACCCGCTCTGCTCG 59.897 66.667 0.00 0.00 0.00 5.03
2497 6783 2.815647 CTCCTTGCCGTCTTCGCC 60.816 66.667 0.00 0.00 35.54 5.54
2593 6879 1.580942 CCATGGCGTTCTTGTGGTG 59.419 57.895 0.00 0.00 0.00 4.17
2815 7309 1.499049 GACTTGACGTCCCTGTGAAC 58.501 55.000 14.12 0.00 36.62 3.18
2856 7350 1.244019 ACAGCTTGGGTTCGCAATCC 61.244 55.000 2.99 0.00 0.00 3.01
3003 7497 1.301087 CACCCCGAAAGCGTACACA 60.301 57.895 0.00 0.00 35.23 3.72
3012 7506 1.758592 CAGAAGGACCACCCCGAAA 59.241 57.895 0.00 0.00 36.73 3.46
3174 7669 0.174162 GCCTGCCCAGCACAAATTAG 59.826 55.000 0.00 0.00 33.79 1.73
3202 7697 4.347453 GCTTGCCACCTTGCACGG 62.347 66.667 7.87 7.87 41.88 4.94
3615 8110 1.817209 GTCATCCTCCTCGTCACCC 59.183 63.158 0.00 0.00 0.00 4.61
3618 8113 1.366854 CGTCGTCATCCTCCTCGTCA 61.367 60.000 0.00 0.00 0.00 4.35
3777 8272 7.278646 TCAAAAGAATTCCTGATGATCTACACG 59.721 37.037 0.65 0.00 0.00 4.49
3851 8348 6.015095 ACTGTACAACCACCCTACTAACTAAC 60.015 42.308 0.00 0.00 0.00 2.34
3852 8349 6.077322 ACTGTACAACCACCCTACTAACTAA 58.923 40.000 0.00 0.00 0.00 2.24
3871 8368 9.371136 CTAGCTAGATGAAACATGAAAACTGTA 57.629 33.333 16.15 0.00 0.00 2.74
3880 8377 8.496751 CATGAATGACTAGCTAGATGAAACATG 58.503 37.037 27.45 24.09 0.00 3.21
3957 8454 9.349713 AGAAACTTCAAACTGGAATGTATACAA 57.650 29.630 10.14 0.00 0.00 2.41
3995 8492 6.906901 AGTTGTAATTCTATAGTTCCCTCCCA 59.093 38.462 0.00 0.00 0.00 4.37
3996 8493 7.376335 AGTTGTAATTCTATAGTTCCCTCCC 57.624 40.000 0.00 0.00 0.00 4.30
3997 8494 7.652507 CGAAGTTGTAATTCTATAGTTCCCTCC 59.347 40.741 0.00 0.00 0.00 4.30
3998 8495 7.169476 GCGAAGTTGTAATTCTATAGTTCCCTC 59.831 40.741 0.00 0.00 0.00 4.30
4041 8539 2.387757 ACAAGGGTTGTTTGCATGAGT 58.612 42.857 0.00 0.00 42.22 3.41
4245 8755 8.875803 CATACACATCAATTTGAAAAATCCCTG 58.124 33.333 2.68 0.00 0.00 4.45
4290 8800 8.667463 TGTATTTCTGTAATAGGCGTTTAAACC 58.333 33.333 12.66 5.64 29.44 3.27
4342 8852 0.249868 AGTTCACGCTGCTTAGCACA 60.250 50.000 1.39 0.00 33.79 4.57
4414 8928 5.248477 GGCCTAATCATACAATCCACCTCTA 59.752 44.000 0.00 0.00 0.00 2.43
4442 8959 3.628942 TGCTGCATCCATAACATGTTCTC 59.371 43.478 15.85 0.00 0.00 2.87
4486 9003 4.160439 TGGTAGAGATGCTCTGTTTTCGAT 59.840 41.667 7.19 0.00 41.37 3.59
4656 9173 9.243637 GTTTGTGACTGCTGTTAAATTGAATTA 57.756 29.630 0.00 0.00 0.00 1.40
4664 9181 6.625362 TGATTTGTTTGTGACTGCTGTTAAA 58.375 32.000 0.00 0.00 0.00 1.52
4964 9502 7.649973 ACCATGCGTTTCTACTAGTAATAGAG 58.350 38.462 3.83 0.00 30.46 2.43
4965 9503 7.283807 TGACCATGCGTTTCTACTAGTAATAGA 59.716 37.037 3.83 0.00 0.00 1.98
4966 9504 7.378995 GTGACCATGCGTTTCTACTAGTAATAG 59.621 40.741 3.76 0.00 0.00 1.73
4967 9505 7.148035 TGTGACCATGCGTTTCTACTAGTAATA 60.148 37.037 3.76 0.00 0.00 0.98
4968 9506 6.040878 GTGACCATGCGTTTCTACTAGTAAT 58.959 40.000 3.76 0.00 0.00 1.89
4971 9509 3.257375 TGTGACCATGCGTTTCTACTAGT 59.743 43.478 0.00 0.00 0.00 2.57
4972 9510 3.612860 GTGTGACCATGCGTTTCTACTAG 59.387 47.826 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.