Multiple sequence alignment - TraesCS5A01G112700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G112700 chr5A 100.000 5130 0 0 2491 7620 219929735 219924606 0.000000e+00 9474.0
1 TraesCS5A01G112700 chr5A 100.000 1859 0 0 1 1859 219932225 219930367 0.000000e+00 3434.0
2 TraesCS5A01G112700 chr5B 94.259 2996 82 18 2493 5409 208644584 208647568 0.000000e+00 4497.0
3 TraesCS5A01G112700 chr5B 94.171 1098 41 13 763 1853 208643485 208644566 0.000000e+00 1652.0
4 TraesCS5A01G112700 chr5B 95.710 979 29 9 5850 6819 208648214 208649188 0.000000e+00 1563.0
5 TraesCS5A01G112700 chr5B 94.624 279 10 2 5409 5686 208647815 208648089 1.960000e-115 427.0
6 TraesCS5A01G112700 chr5B 86.782 348 34 8 6819 7155 567426996 567427342 2.010000e-100 377.0
7 TraesCS5A01G112700 chr5B 87.600 250 31 0 12 261 208592665 208592914 2.690000e-74 291.0
8 TraesCS5A01G112700 chr5B 79.424 243 29 4 7244 7486 43833174 43832953 1.320000e-32 152.0
9 TraesCS5A01G112700 chr5D 89.666 1287 58 14 4162 5406 203079234 203077981 0.000000e+00 1570.0
10 TraesCS5A01G112700 chr5D 93.515 1064 38 10 763 1823 203083638 203082603 0.000000e+00 1554.0
11 TraesCS5A01G112700 chr5D 96.919 844 22 4 5795 6636 203076478 203075637 0.000000e+00 1411.0
12 TraesCS5A01G112700 chr5D 93.871 930 38 6 2567 3479 203082377 203081450 0.000000e+00 1384.0
13 TraesCS5A01G112700 chr5D 93.465 505 24 4 3674 4173 203079899 203079399 0.000000e+00 741.0
14 TraesCS5A01G112700 chr5D 89.961 259 24 2 5 262 203084823 203084566 4.410000e-87 333.0
15 TraesCS5A01G112700 chr5D 92.896 183 12 1 5409 5591 203077190 203077009 1.630000e-66 265.0
16 TraesCS5A01G112700 chr5D 96.721 122 4 0 3464 3585 203080015 203079894 3.600000e-48 204.0
17 TraesCS5A01G112700 chr5D 92.241 116 7 2 5687 5800 203076879 203076764 6.120000e-36 163.0
18 TraesCS5A01G112700 chr5D 98.718 78 1 0 6742 6819 203075572 203075495 1.030000e-28 139.0
19 TraesCS5A01G112700 chr5D 93.590 78 5 0 7409 7486 547252067 547252144 4.830000e-22 117.0
20 TraesCS5A01G112700 chr2B 84.458 637 80 11 6820 7447 741478668 741478042 1.820000e-170 610.0
21 TraesCS5A01G112700 chr2B 87.464 343 34 5 6820 7153 67072337 67072679 3.330000e-103 387.0
22 TraesCS5A01G112700 chr1A 89.655 435 40 4 7186 7620 243608040 243607611 4.020000e-152 549.0
23 TraesCS5A01G112700 chr1A 89.683 378 29 6 6820 7190 243617174 243616800 2.490000e-129 473.0
24 TraesCS5A01G112700 chr7D 87.150 428 42 10 6820 7241 585482064 585482484 2.490000e-129 473.0
25 TraesCS5A01G112700 chr4A 86.279 430 52 3 6819 7241 687411292 687411721 1.940000e-125 460.0
26 TraesCS5A01G112700 chr4A 86.744 347 35 7 6820 7155 636095253 636094907 7.220000e-100 375.0
27 TraesCS5A01G112700 chr4A 79.747 237 27 8 7244 7480 687159891 687160106 1.320000e-32 152.0
28 TraesCS5A01G112700 chr6B 88.630 343 28 8 6820 7152 697994902 697994561 2.560000e-109 407.0
29 TraesCS5A01G112700 chr6B 92.405 79 6 0 7408 7486 697993981 697993903 6.250000e-21 113.0
30 TraesCS5A01G112700 chr6D 81.623 419 47 15 6834 7241 47183402 47183003 3.430000e-83 320.0
31 TraesCS5A01G112700 chr3D 92.405 79 6 0 7408 7486 595078418 595078340 6.250000e-21 113.0
32 TraesCS5A01G112700 chr6A 90.698 43 4 0 4894 4936 23399363 23399405 2.970000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G112700 chr5A 219924606 219932225 7619 True 6454.00 9474 100.0000 1 7620 2 chr5A.!!$R1 7619
1 TraesCS5A01G112700 chr5B 208643485 208649188 5703 False 2034.75 4497 94.6910 763 6819 4 chr5B.!!$F3 6056
2 TraesCS5A01G112700 chr5D 203075495 203084823 9328 True 776.40 1570 93.7973 5 6819 10 chr5D.!!$R1 6814
3 TraesCS5A01G112700 chr2B 741478042 741478668 626 True 610.00 610 84.4580 6820 7447 1 chr2B.!!$R1 627
4 TraesCS5A01G112700 chr6B 697993903 697994902 999 True 260.00 407 90.5175 6820 7486 2 chr6B.!!$R1 666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
694 1217 0.033228 TCTTCGTACGGGCCGAAAAA 59.967 50.0 35.78 18.70 43.03 1.94 F
695 1218 0.164432 CTTCGTACGGGCCGAAAAAC 59.836 55.0 35.78 21.84 43.03 2.43 F
698 1221 0.307146 CGTACGGGCCGAAAAACAAA 59.693 50.0 35.78 3.93 0.00 2.83 F
935 1462 0.949397 AAAAAGTTTCCTCCCGCGTC 59.051 50.0 4.92 0.00 0.00 5.19 F
1776 2308 0.978146 AGAGGTGGCAGGATAACGCT 60.978 55.0 0.00 0.00 0.00 5.07 F
3447 4004 0.953960 AAGCCTACCTTGAAACGCGG 60.954 55.0 12.47 0.00 30.99 6.46 F
4586 6785 0.173708 GGCTGTCACGTCCTCCTTAG 59.826 60.0 0.00 0.00 0.00 2.18 F
4824 7053 0.032615 ATGAGCGAGGAGGAGGAAGT 60.033 55.0 0.00 0.00 0.00 3.01 F
5638 8704 0.039180 AAACCCCGGAATCTTGACCC 59.961 55.0 0.73 0.00 0.00 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1776 2308 0.621082 TATCAAACACCCCATCGCCA 59.379 50.000 0.00 0.00 0.00 5.69 R
2554 3095 0.768622 ACGACCAAATCCCAACCTCA 59.231 50.000 0.00 0.00 0.00 3.86 R
2555 3096 1.165270 CACGACCAAATCCCAACCTC 58.835 55.000 0.00 0.00 0.00 3.85 R
2725 3266 4.864704 TTGGAAGGAATAACTTTGCACC 57.135 40.909 0.00 0.00 35.91 5.01 R
3635 5642 0.314935 AATTGACCAACGCAGCCTTG 59.685 50.000 0.00 0.00 0.00 3.61 R
4808 7037 0.251832 TTCACTTCCTCCTCCTCGCT 60.252 55.000 0.00 0.00 0.00 4.93 R
5591 8656 0.313987 GGTTGAAAAGACTTGGGCGG 59.686 55.000 0.00 0.00 0.00 6.13 R
5816 9207 1.062047 CACTGTCAGCGCATGCATC 59.938 57.895 19.57 8.73 46.23 3.91 R
7577 11394 0.034477 AATGGATGACGGGGTTGACC 60.034 55.000 0.00 0.00 39.11 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.961849 TGATCGAAACCAATCCAATCCA 58.038 40.909 0.00 0.00 0.00 3.41
41 42 5.203528 CCAATCCAATCCAGTCCAAATAGT 58.796 41.667 0.00 0.00 0.00 2.12
100 101 5.411669 AGCAGAAAAACCCTAACTATGAACG 59.588 40.000 0.00 0.00 0.00 3.95
120 122 1.406887 GCTAGGAGGCGGAACAAATCA 60.407 52.381 0.00 0.00 0.00 2.57
131 133 0.802494 AACAAATCAGCGCTTACCCG 59.198 50.000 7.50 0.00 0.00 5.28
135 137 1.961180 AATCAGCGCTTACCCGAGCT 61.961 55.000 7.50 0.00 40.78 4.09
156 158 3.254629 TGCCATTGCAGAGAAGGTC 57.745 52.632 0.00 0.00 44.23 3.85
157 159 0.674581 TGCCATTGCAGAGAAGGTCG 60.675 55.000 0.00 0.00 44.23 4.79
159 161 0.745845 CCATTGCAGAGAAGGTCGGG 60.746 60.000 0.00 0.00 0.00 5.14
171 173 0.824182 AGGTCGGGCGAGGAGAATAG 60.824 60.000 0.00 0.00 0.00 1.73
176 178 2.201022 GGCGAGGAGAATAGCCCGA 61.201 63.158 0.00 0.00 43.54 5.14
185 187 3.007398 GGAGAATAGCCCGATGAGAACAT 59.993 47.826 0.00 0.00 39.67 2.71
187 189 3.643320 AGAATAGCCCGATGAGAACATGA 59.357 43.478 0.00 0.00 36.82 3.07
191 193 1.137872 GCCCGATGAGAACATGAGTCT 59.862 52.381 0.00 0.88 36.82 3.24
193 195 2.223923 CCCGATGAGAACATGAGTCTCC 60.224 54.545 20.92 10.76 36.82 3.71
196 198 2.325661 TGAGAACATGAGTCTCCCCA 57.674 50.000 20.92 7.45 0.00 4.96
201 203 1.573108 ACATGAGTCTCCCCAACGAT 58.427 50.000 0.00 0.00 0.00 3.73
216 218 3.119637 CCAACGATGATGGGGTTTGTAAC 60.120 47.826 0.00 0.00 34.15 2.50
240 242 0.249615 ATCATGGTCCTCGTGATGCG 60.250 55.000 0.00 0.00 46.99 4.73
241 243 1.153568 CATGGTCCTCGTGATGCGT 60.154 57.895 0.00 0.00 42.13 5.24
250 252 1.809619 CGTGATGCGTCGGGATGTT 60.810 57.895 0.58 0.00 35.54 2.71
262 264 1.202533 CGGGATGTTAAGGATGAGCGT 60.203 52.381 0.00 0.00 0.00 5.07
263 265 2.484889 GGGATGTTAAGGATGAGCGTC 58.515 52.381 0.00 0.00 0.00 5.19
264 266 2.103263 GGGATGTTAAGGATGAGCGTCT 59.897 50.000 0.00 0.00 0.00 4.18
268 270 2.230508 TGTTAAGGATGAGCGTCTCGTT 59.769 45.455 3.61 0.00 32.35 3.85
271 273 0.603569 AGGATGAGCGTCTCGTTGTT 59.396 50.000 3.61 0.00 32.35 2.83
274 276 1.651138 GATGAGCGTCTCGTTGTTGAG 59.349 52.381 3.61 0.00 37.33 3.02
286 408 2.783135 GTTGTTGAGCCCAAGATGAGA 58.217 47.619 0.00 0.00 32.06 3.27
291 413 1.347707 TGAGCCCAAGATGAGAACGTT 59.652 47.619 0.00 0.00 0.00 3.99
298 420 0.603569 AGATGAGAACGTTCGGCACT 59.396 50.000 22.91 18.86 0.00 4.40
303 425 1.593209 GAACGTTCGGCACTGGTGA 60.593 57.895 13.36 0.00 0.00 4.02
339 461 3.913445 TGGGGTGGTGCATTGGCT 61.913 61.111 0.00 0.00 41.91 4.75
340 462 3.070576 GGGGTGGTGCATTGGCTC 61.071 66.667 0.00 0.00 41.91 4.70
355 477 2.261361 CTCGTGCCCGTGACATCA 59.739 61.111 0.00 0.00 35.01 3.07
356 478 2.048597 TCGTGCCCGTGACATCAC 60.049 61.111 1.70 1.70 43.15 3.06
369 491 3.769844 GTGACATCACTAAGAGAGGGGAA 59.230 47.826 4.72 0.00 43.25 3.97
371 493 4.027437 GACATCACTAAGAGAGGGGAAGT 58.973 47.826 0.00 0.00 0.00 3.01
388 510 3.492829 GGAAGTCGCCCTAAGAACTATGG 60.493 52.174 0.00 0.00 0.00 2.74
397 519 3.829601 CCTAAGAACTATGGCGAGATCCT 59.170 47.826 0.00 0.00 0.00 3.24
415 537 2.759795 GGCTGGAAGAGGCAAGGT 59.240 61.111 0.00 0.00 46.77 3.50
417 539 1.743252 GCTGGAAGAGGCAAGGTCG 60.743 63.158 0.00 0.00 34.07 4.79
422 544 0.889186 GAAGAGGCAAGGTCGGCAAA 60.889 55.000 0.00 0.00 0.00 3.68
434 556 0.543410 TCGGCAAACCACCTCTCCTA 60.543 55.000 0.00 0.00 34.57 2.94
435 557 0.108138 CGGCAAACCACCTCTCCTAG 60.108 60.000 0.00 0.00 34.57 3.02
449 571 4.101448 CTAGGCGGGGTTGCTGCT 62.101 66.667 0.00 0.00 34.52 4.24
454 576 2.594303 CGGGGTTGCTGCTGACAA 60.594 61.111 0.00 0.00 0.00 3.18
465 587 1.204704 CTGCTGACAACGATGGGAGTA 59.795 52.381 0.00 0.00 0.00 2.59
514 637 4.161295 CGAAGGGGCGATGCAGGA 62.161 66.667 0.00 0.00 0.00 3.86
520 643 2.420890 GGCGATGCAGGAGAGAGG 59.579 66.667 0.00 0.00 0.00 3.69
521 644 2.130426 GGCGATGCAGGAGAGAGGA 61.130 63.158 0.00 0.00 0.00 3.71
522 645 1.363443 GCGATGCAGGAGAGAGGAG 59.637 63.158 0.00 0.00 0.00 3.69
523 646 1.391157 GCGATGCAGGAGAGAGGAGT 61.391 60.000 0.00 0.00 0.00 3.85
524 647 1.974265 CGATGCAGGAGAGAGGAGTA 58.026 55.000 0.00 0.00 0.00 2.59
525 648 2.302260 CGATGCAGGAGAGAGGAGTAA 58.698 52.381 0.00 0.00 0.00 2.24
526 649 2.293122 CGATGCAGGAGAGAGGAGTAAG 59.707 54.545 0.00 0.00 0.00 2.34
527 650 2.909504 TGCAGGAGAGAGGAGTAAGT 57.090 50.000 0.00 0.00 0.00 2.24
528 651 2.451490 TGCAGGAGAGAGGAGTAAGTG 58.549 52.381 0.00 0.00 0.00 3.16
529 652 2.225142 TGCAGGAGAGAGGAGTAAGTGT 60.225 50.000 0.00 0.00 0.00 3.55
537 675 5.329399 AGAGAGGAGTAAGTGTGTCTGAAT 58.671 41.667 0.00 0.00 0.00 2.57
556 694 1.324383 TTAGCGTGTGAGGTGACTGA 58.676 50.000 0.00 0.00 44.43 3.41
563 701 1.615883 TGTGAGGTGACTGAAGAGAGC 59.384 52.381 0.00 0.00 44.43 4.09
581 719 0.172803 GCGTGGGAGTTATGAGACGT 59.827 55.000 0.00 0.00 0.00 4.34
585 723 3.376234 CGTGGGAGTTATGAGACGTCTTA 59.624 47.826 21.08 16.88 0.00 2.10
587 725 5.521544 GTGGGAGTTATGAGACGTCTTATC 58.478 45.833 24.40 12.29 0.00 1.75
588 726 5.067413 GTGGGAGTTATGAGACGTCTTATCA 59.933 44.000 24.40 16.26 0.00 2.15
596 734 1.609555 AGACGTCTTATCATCTCCCGC 59.390 52.381 13.58 0.00 0.00 6.13
597 735 1.337071 GACGTCTTATCATCTCCCGCA 59.663 52.381 8.70 0.00 0.00 5.69
601 739 3.430218 CGTCTTATCATCTCCCGCAATTC 59.570 47.826 0.00 0.00 0.00 2.17
606 744 0.394216 CATCTCCCGCAATTCCCACA 60.394 55.000 0.00 0.00 0.00 4.17
648 1171 2.672874 CTCGCAAAAGATGGACGATTCA 59.327 45.455 0.00 0.00 31.59 2.57
650 1173 2.223112 CGCAAAAGATGGACGATTCAGG 60.223 50.000 0.00 0.00 0.00 3.86
652 1175 3.064545 GCAAAAGATGGACGATTCAGGAG 59.935 47.826 0.00 0.00 0.00 3.69
657 1180 1.639722 TGGACGATTCAGGAGTTCCA 58.360 50.000 0.28 0.00 38.89 3.53
662 1185 5.600898 TGGACGATTCAGGAGTTCCAATATA 59.399 40.000 0.28 0.00 38.89 0.86
663 1186 6.159988 GGACGATTCAGGAGTTCCAATATAG 58.840 44.000 0.28 0.00 38.89 1.31
666 1189 5.866633 CGATTCAGGAGTTCCAATATAGAGC 59.133 44.000 0.28 0.00 38.89 4.09
667 1190 6.295011 CGATTCAGGAGTTCCAATATAGAGCT 60.295 42.308 0.28 0.00 38.89 4.09
668 1191 7.094162 CGATTCAGGAGTTCCAATATAGAGCTA 60.094 40.741 0.28 0.00 38.89 3.32
669 1192 6.902771 TCAGGAGTTCCAATATAGAGCTAC 57.097 41.667 0.28 0.00 38.89 3.58
670 1193 6.615617 TCAGGAGTTCCAATATAGAGCTACT 58.384 40.000 0.28 0.00 36.28 2.57
671 1194 7.069986 TCAGGAGTTCCAATATAGAGCTACTT 58.930 38.462 0.28 0.00 33.84 2.24
672 1195 7.565398 TCAGGAGTTCCAATATAGAGCTACTTT 59.435 37.037 0.28 0.00 33.84 2.66
673 1196 8.861086 CAGGAGTTCCAATATAGAGCTACTTTA 58.139 37.037 0.28 0.00 33.84 1.85
674 1197 9.435570 AGGAGTTCCAATATAGAGCTACTTTAA 57.564 33.333 0.28 0.00 32.28 1.52
681 1204 9.915629 CCAATATAGAGCTACTTTAATCTTCGT 57.084 33.333 0.00 0.00 0.00 3.85
685 1208 5.819059 AGAGCTACTTTAATCTTCGTACGG 58.181 41.667 16.52 0.00 0.00 4.02
686 1209 4.929781 AGCTACTTTAATCTTCGTACGGG 58.070 43.478 16.52 9.03 0.00 5.28
687 1210 3.488678 GCTACTTTAATCTTCGTACGGGC 59.511 47.826 16.52 0.00 0.00 6.13
688 1211 2.897436 ACTTTAATCTTCGTACGGGCC 58.103 47.619 16.52 0.00 0.00 5.80
689 1212 1.856597 CTTTAATCTTCGTACGGGCCG 59.143 52.381 27.06 27.06 0.00 6.13
690 1213 1.102154 TTAATCTTCGTACGGGCCGA 58.898 50.000 35.78 13.93 0.00 5.54
691 1214 1.102154 TAATCTTCGTACGGGCCGAA 58.898 50.000 35.78 15.70 41.60 4.30
692 1215 0.247185 AATCTTCGTACGGGCCGAAA 59.753 50.000 35.78 17.77 43.03 3.46
693 1216 0.247185 ATCTTCGTACGGGCCGAAAA 59.753 50.000 35.78 18.35 43.03 2.29
694 1217 0.033228 TCTTCGTACGGGCCGAAAAA 59.967 50.000 35.78 18.70 43.03 1.94
695 1218 0.164432 CTTCGTACGGGCCGAAAAAC 59.836 55.000 35.78 21.84 43.03 2.43
696 1219 0.531532 TTCGTACGGGCCGAAAAACA 60.532 50.000 35.78 8.74 40.97 2.83
697 1220 0.531532 TCGTACGGGCCGAAAAACAA 60.532 50.000 35.78 7.50 0.00 2.83
698 1221 0.307146 CGTACGGGCCGAAAAACAAA 59.693 50.000 35.78 3.93 0.00 2.83
699 1222 1.069091 CGTACGGGCCGAAAAACAAAT 60.069 47.619 35.78 9.31 0.00 2.32
700 1223 2.159234 CGTACGGGCCGAAAAACAAATA 59.841 45.455 35.78 8.12 0.00 1.40
701 1224 3.181508 CGTACGGGCCGAAAAACAAATAT 60.182 43.478 35.78 7.84 0.00 1.28
702 1225 4.033817 CGTACGGGCCGAAAAACAAATATA 59.966 41.667 35.78 6.67 0.00 0.86
703 1226 4.625972 ACGGGCCGAAAAACAAATATAG 57.374 40.909 35.78 0.00 0.00 1.31
704 1227 4.011698 ACGGGCCGAAAAACAAATATAGT 58.988 39.130 35.78 0.00 0.00 2.12
705 1228 4.095334 ACGGGCCGAAAAACAAATATAGTC 59.905 41.667 35.78 0.00 0.00 2.59
706 1229 4.334481 CGGGCCGAAAAACAAATATAGTCT 59.666 41.667 24.41 0.00 0.00 3.24
707 1230 5.524646 CGGGCCGAAAAACAAATATAGTCTA 59.475 40.000 24.41 0.00 0.00 2.59
708 1231 6.510638 CGGGCCGAAAAACAAATATAGTCTAC 60.511 42.308 24.41 0.00 0.00 2.59
709 1232 6.316890 GGGCCGAAAAACAAATATAGTCTACA 59.683 38.462 0.00 0.00 0.00 2.74
710 1233 7.184779 GGCCGAAAAACAAATATAGTCTACAC 58.815 38.462 0.00 0.00 0.00 2.90
711 1234 7.148373 GGCCGAAAAACAAATATAGTCTACACA 60.148 37.037 0.00 0.00 0.00 3.72
712 1235 8.231837 GCCGAAAAACAAATATAGTCTACACAA 58.768 33.333 0.00 0.00 0.00 3.33
713 1236 9.537848 CCGAAAAACAAATATAGTCTACACAAC 57.462 33.333 0.00 0.00 0.00 3.32
714 1237 9.537848 CGAAAAACAAATATAGTCTACACAACC 57.462 33.333 0.00 0.00 0.00 3.77
726 1249 9.920946 ATAGTCTACACAACCAAATAATCCAAT 57.079 29.630 0.00 0.00 0.00 3.16
727 1250 8.650143 AGTCTACACAACCAAATAATCCAATT 57.350 30.769 0.00 0.00 0.00 2.32
728 1251 8.739972 AGTCTACACAACCAAATAATCCAATTC 58.260 33.333 0.00 0.00 0.00 2.17
729 1252 7.973944 GTCTACACAACCAAATAATCCAATTCC 59.026 37.037 0.00 0.00 0.00 3.01
730 1253 6.678568 ACACAACCAAATAATCCAATTCCA 57.321 33.333 0.00 0.00 0.00 3.53
731 1254 7.256494 ACACAACCAAATAATCCAATTCCAT 57.744 32.000 0.00 0.00 0.00 3.41
732 1255 7.688343 ACACAACCAAATAATCCAATTCCATT 58.312 30.769 0.00 0.00 0.00 3.16
733 1256 7.823799 ACACAACCAAATAATCCAATTCCATTC 59.176 33.333 0.00 0.00 0.00 2.67
734 1257 7.823310 CACAACCAAATAATCCAATTCCATTCA 59.177 33.333 0.00 0.00 0.00 2.57
735 1258 8.381636 ACAACCAAATAATCCAATTCCATTCAA 58.618 29.630 0.00 0.00 0.00 2.69
736 1259 8.885722 CAACCAAATAATCCAATTCCATTCAAG 58.114 33.333 0.00 0.00 0.00 3.02
737 1260 8.378115 ACCAAATAATCCAATTCCATTCAAGA 57.622 30.769 0.00 0.00 0.00 3.02
738 1261 8.995577 ACCAAATAATCCAATTCCATTCAAGAT 58.004 29.630 0.00 0.00 0.00 2.40
739 1262 9.268268 CCAAATAATCCAATTCCATTCAAGATG 57.732 33.333 0.00 0.00 0.00 2.90
740 1263 9.268268 CAAATAATCCAATTCCATTCAAGATGG 57.732 33.333 0.00 0.00 40.48 3.51
741 1264 8.786710 AATAATCCAATTCCATTCAAGATGGA 57.213 30.769 3.70 3.70 45.71 3.41
742 1265 8.967779 ATAATCCAATTCCATTCAAGATGGAT 57.032 30.769 8.45 0.00 46.51 3.41
743 1266 6.912951 ATCCAATTCCATTCAAGATGGATC 57.087 37.500 8.45 0.00 46.51 3.36
744 1267 6.022107 TCCAATTCCATTCAAGATGGATCT 57.978 37.500 8.45 0.00 46.51 2.75
745 1268 7.152942 TCCAATTCCATTCAAGATGGATCTA 57.847 36.000 8.45 0.00 46.51 1.98
746 1269 7.585440 TCCAATTCCATTCAAGATGGATCTAA 58.415 34.615 8.45 0.00 46.51 2.10
747 1270 8.229605 TCCAATTCCATTCAAGATGGATCTAAT 58.770 33.333 8.45 0.00 46.51 1.73
748 1271 8.867097 CCAATTCCATTCAAGATGGATCTAATT 58.133 33.333 8.45 3.42 46.51 1.40
749 1272 9.692749 CAATTCCATTCAAGATGGATCTAATTG 57.307 33.333 8.45 10.75 46.51 2.32
750 1273 9.650714 AATTCCATTCAAGATGGATCTAATTGA 57.349 29.630 8.45 6.13 46.51 2.57
751 1274 8.687292 TTCCATTCAAGATGGATCTAATTGAG 57.313 34.615 8.45 1.99 46.51 3.02
752 1275 8.037723 TCCATTCAAGATGGATCTAATTGAGA 57.962 34.615 3.70 3.43 42.81 3.27
753 1276 8.496916 TCCATTCAAGATGGATCTAATTGAGAA 58.503 33.333 3.70 0.49 42.81 2.87
754 1277 9.298250 CCATTCAAGATGGATCTAATTGAGAAT 57.702 33.333 9.15 2.37 41.64 2.40
784 1307 4.184629 AGAGCTGCTTTAACCTTCGTATG 58.815 43.478 2.53 0.00 0.00 2.39
785 1308 4.081642 AGAGCTGCTTTAACCTTCGTATGA 60.082 41.667 2.53 0.00 0.00 2.15
790 1317 3.777478 CTTTAACCTTCGTATGAGCCGA 58.223 45.455 0.00 0.00 0.00 5.54
801 1328 5.597806 TCGTATGAGCCGAAAAACAGATAT 58.402 37.500 0.00 0.00 0.00 1.63
808 1335 3.003378 GCCGAAAAACAGATATAGCCCAC 59.997 47.826 0.00 0.00 0.00 4.61
813 1340 6.183360 CGAAAAACAGATATAGCCCACACAAT 60.183 38.462 0.00 0.00 0.00 2.71
842 1369 8.874744 ATAATCCGATTTCATTCAAGATGGAT 57.125 30.769 0.00 0.00 35.30 3.41
862 1389 6.834107 TGGATCTGATTGAGAATAATGCAGA 58.166 36.000 0.00 0.00 33.12 4.26
863 1390 6.935208 TGGATCTGATTGAGAATAATGCAGAG 59.065 38.462 0.00 0.00 33.12 3.35
873 1400 4.332819 AGAATAATGCAGAGTACCAAACGC 59.667 41.667 0.00 0.00 0.00 4.84
874 1401 1.890876 AATGCAGAGTACCAAACGCA 58.109 45.000 0.00 0.00 0.00 5.24
878 1405 1.128692 GCAGAGTACCAAACGCATCAC 59.871 52.381 0.00 0.00 0.00 3.06
916 1443 6.005198 AGTTTCCTCTCTAGACTCGAGAAAA 58.995 40.000 21.68 4.49 37.10 2.29
935 1462 0.949397 AAAAAGTTTCCTCCCGCGTC 59.051 50.000 4.92 0.00 0.00 5.19
940 1467 1.082679 GTTTCCTCCCGCGTCTAAGC 61.083 60.000 4.92 0.00 0.00 3.09
960 1487 1.606668 CGCTCTGTCAGATAGAGTCCC 59.393 57.143 21.68 7.81 42.83 4.46
1248 1775 6.711645 ACCTGTCCGTACTATTCTAATCTCTC 59.288 42.308 0.00 0.00 0.00 3.20
1315 1842 6.631962 TCTTGGGTTTATTTGAAACAAACGT 58.368 32.000 5.81 0.00 33.85 3.99
1389 1918 6.755542 AAATTTATGGTGGTTTGGAGGAAA 57.244 33.333 0.00 0.00 0.00 3.13
1470 1999 9.892444 TGTATCCCCTTTTCTCACTATTAGATA 57.108 33.333 0.00 0.00 0.00 1.98
1473 2002 9.851267 ATCCCCTTTTCTCACTATTAGATAGAT 57.149 33.333 0.00 0.00 36.68 1.98
1474 2003 9.676129 TCCCCTTTTCTCACTATTAGATAGATT 57.324 33.333 0.00 0.00 36.68 2.40
1486 2015 3.066208 AGATAGATTTCAGCTCCCCCA 57.934 47.619 0.00 0.00 0.00 4.96
1492 2021 3.771479 AGATTTCAGCTCCCCCAATTTTC 59.229 43.478 0.00 0.00 0.00 2.29
1494 2023 2.220653 TCAGCTCCCCCAATTTTCTG 57.779 50.000 0.00 0.00 0.00 3.02
1501 2030 1.969923 CCCCCAATTTTCTGTGAAGCA 59.030 47.619 0.00 0.00 0.00 3.91
1569 2098 1.601703 GGGGGAAATGCGGCAAATT 59.398 52.632 6.82 5.32 0.00 1.82
1648 2180 1.840635 GTGGATTCCCCTAGCACTTCT 59.159 52.381 0.00 0.00 35.38 2.85
1776 2308 0.978146 AGAGGTGGCAGGATAACGCT 60.978 55.000 0.00 0.00 0.00 5.07
1856 2388 4.742438 TTGAAGGTAATCAACTGAACGC 57.258 40.909 0.00 0.00 34.50 4.84
1858 2390 1.076332 AGGTAATCAACTGAACGCGC 58.924 50.000 5.73 0.00 0.00 6.86
2554 3095 3.555586 GCATGGTTTTCTTGGCATTCACT 60.556 43.478 0.00 0.00 0.00 3.41
2555 3096 3.731652 TGGTTTTCTTGGCATTCACTG 57.268 42.857 0.00 0.00 0.00 3.66
2702 3243 6.661377 TGCTTTAGATTTATGCCACAAGGTAA 59.339 34.615 0.00 0.00 37.19 2.85
2725 3266 6.942532 ACCAAACAGCATAACATATACAGG 57.057 37.500 0.00 0.00 0.00 4.00
2987 3532 5.983118 GGAAGCTCTAGAACAGCTAAATCTC 59.017 44.000 5.48 0.28 46.96 2.75
3181 3727 7.780271 ACCACTTAAATTATCCTTTGAGATCCC 59.220 37.037 0.00 0.00 0.00 3.85
3256 3802 2.047274 TTGGACAGCAGGCTACGC 60.047 61.111 0.00 0.00 0.00 4.42
3447 4004 0.953960 AAGCCTACCTTGAAACGCGG 60.954 55.000 12.47 0.00 30.99 6.46
3621 5628 1.668793 GCCTGCCAAATTGCCACAC 60.669 57.895 0.00 0.00 0.00 3.82
3626 5633 1.228533 GCCAAATTGCCACACCAAAG 58.771 50.000 0.00 0.00 0.00 2.77
3635 5642 0.179113 CCACACCAAAGCACACCAAC 60.179 55.000 0.00 0.00 0.00 3.77
3636 5643 0.529833 CACACCAAAGCACACCAACA 59.470 50.000 0.00 0.00 0.00 3.33
3640 5647 0.530431 CCAAAGCACACCAACAAGGC 60.530 55.000 0.00 0.00 43.14 4.35
3729 5744 4.141846 ACCTAGTATGATTCTGTGCCTGTG 60.142 45.833 0.00 0.00 0.00 3.66
3730 5745 4.100035 CCTAGTATGATTCTGTGCCTGTGA 59.900 45.833 0.00 0.00 0.00 3.58
3731 5746 3.866651 AGTATGATTCTGTGCCTGTGAC 58.133 45.455 0.00 0.00 0.00 3.67
3733 5748 2.462456 TGATTCTGTGCCTGTGACTC 57.538 50.000 0.00 0.00 0.00 3.36
3768 5784 4.035909 TGTCTTTAACGTTGCCCTTCTTTC 59.964 41.667 11.99 0.00 0.00 2.62
3867 5883 6.566942 GCACACGGTTTTTCATGTTATCACTA 60.567 38.462 0.00 0.00 0.00 2.74
3979 5995 3.820557 ACAACTTGCCTCAAGAAAGCTA 58.179 40.909 12.89 0.00 43.42 3.32
4024 6040 6.480524 TTCACGTATTCCTGTCTCATTTTG 57.519 37.500 0.00 0.00 0.00 2.44
4028 6044 7.227711 TCACGTATTCCTGTCTCATTTTGAAAA 59.772 33.333 0.00 0.00 0.00 2.29
4077 6093 1.875576 GCTCGGCATCCTATTGTGAGG 60.876 57.143 0.00 0.00 38.03 3.86
4210 6405 3.761752 GCAGCAATGAAGGTAGGGTTTAA 59.238 43.478 0.00 0.00 0.00 1.52
4250 6445 3.321682 TGAAGTTCTGGGGCTTCATTTTG 59.678 43.478 4.17 0.00 44.01 2.44
4345 6540 5.319453 CATCAGCATATTAACCACCTCCAT 58.681 41.667 0.00 0.00 0.00 3.41
4505 6704 3.825585 TGCATCTAATTGGTGCAACAAGA 59.174 39.130 23.52 15.11 44.99 3.02
4556 6755 3.074412 ACGTGGCCAAACTTGATAAGAG 58.926 45.455 7.24 0.00 0.00 2.85
4559 6758 4.327680 GTGGCCAAACTTGATAAGAGTCT 58.672 43.478 7.24 0.00 0.00 3.24
4568 6767 5.200483 ACTTGATAAGAGTCTGAGAGAGGG 58.800 45.833 0.00 0.00 0.00 4.30
4569 6768 3.561143 TGATAAGAGTCTGAGAGAGGGC 58.439 50.000 0.00 0.00 0.00 5.19
4570 6769 3.204158 TGATAAGAGTCTGAGAGAGGGCT 59.796 47.826 0.00 0.00 0.00 5.19
4571 6770 1.851304 AAGAGTCTGAGAGAGGGCTG 58.149 55.000 0.00 0.00 0.00 4.85
4572 6771 0.704076 AGAGTCTGAGAGAGGGCTGT 59.296 55.000 0.00 0.00 0.00 4.40
4573 6772 1.102978 GAGTCTGAGAGAGGGCTGTC 58.897 60.000 0.00 0.00 35.12 3.51
4574 6773 0.407528 AGTCTGAGAGAGGGCTGTCA 59.592 55.000 0.00 0.00 41.60 3.58
4575 6774 0.530288 GTCTGAGAGAGGGCTGTCAC 59.470 60.000 0.00 0.00 39.27 3.67
4576 6775 0.962855 TCTGAGAGAGGGCTGTCACG 60.963 60.000 0.00 0.00 39.27 4.35
4577 6776 1.228583 TGAGAGAGGGCTGTCACGT 60.229 57.895 0.00 0.00 39.27 4.49
4578 6777 1.244697 TGAGAGAGGGCTGTCACGTC 61.245 60.000 0.00 0.00 39.27 4.34
4579 6778 1.939769 GAGAGAGGGCTGTCACGTCC 61.940 65.000 0.00 0.00 34.71 4.79
4580 6779 1.979693 GAGAGGGCTGTCACGTCCT 60.980 63.158 0.00 0.00 42.95 3.85
4582 6781 2.997897 AGGGCTGTCACGTCCTCC 60.998 66.667 0.00 0.00 32.31 4.30
4583 6782 2.997897 GGGCTGTCACGTCCTCCT 60.998 66.667 0.00 0.00 0.00 3.69
4584 6783 2.584391 GGGCTGTCACGTCCTCCTT 61.584 63.158 0.00 0.00 0.00 3.36
4585 6784 1.255667 GGGCTGTCACGTCCTCCTTA 61.256 60.000 0.00 0.00 0.00 2.69
4586 6785 0.173708 GGCTGTCACGTCCTCCTTAG 59.826 60.000 0.00 0.00 0.00 2.18
4587 6786 0.889306 GCTGTCACGTCCTCCTTAGT 59.111 55.000 0.00 0.00 0.00 2.24
4588 6787 2.089980 GCTGTCACGTCCTCCTTAGTA 58.910 52.381 0.00 0.00 0.00 1.82
4589 6788 2.097791 GCTGTCACGTCCTCCTTAGTAG 59.902 54.545 0.00 0.00 0.00 2.57
4590 6789 2.683867 CTGTCACGTCCTCCTTAGTAGG 59.316 54.545 0.00 0.00 43.46 3.18
4638 6858 3.496130 GCATACATGGAGGTTCTGAATCG 59.504 47.826 0.00 0.00 0.00 3.34
4730 6959 4.498009 GGTCAATGGCAATCACGAATAAGG 60.498 45.833 0.00 0.00 0.00 2.69
4808 7037 1.951895 GCACACCATGAAGCAGGATGA 60.952 52.381 0.00 0.00 39.69 2.92
4824 7053 0.032615 ATGAGCGAGGAGGAGGAAGT 60.033 55.000 0.00 0.00 0.00 3.01
4828 7057 0.174617 GCGAGGAGGAGGAAGTGAAG 59.825 60.000 0.00 0.00 0.00 3.02
4941 7178 4.552166 TTTTAGTGTCAAGCTTGAGCAC 57.448 40.909 32.46 32.46 45.16 4.40
4953 7190 1.325640 CTTGAGCACCAACATCGATCG 59.674 52.381 9.36 9.36 0.00 3.69
4961 7198 1.464608 CCAACATCGATCGCTTGTTGT 59.535 47.619 35.24 22.06 45.47 3.32
4972 7209 1.230324 GCTTGTTGTGGTGGAGTCTC 58.770 55.000 0.00 0.00 0.00 3.36
5077 7314 2.608546 GCTCATGTGCAGAGACAATCTC 59.391 50.000 14.66 0.00 43.70 2.75
5133 7393 3.005155 GCATGGATTAATCTCCTTGGTGC 59.995 47.826 14.95 10.52 39.61 5.01
5241 7512 0.243365 GCGCAATCACATCCCAACAA 59.757 50.000 0.30 0.00 0.00 2.83
5256 7527 3.243367 CCCAACAAGATTTGAAGAACGCA 60.243 43.478 0.00 0.00 0.00 5.24
5498 8563 1.871039 GCAACTGGAGTTTAGCGTTGA 59.129 47.619 0.00 0.00 37.69 3.18
5534 8599 1.674651 CACGACCGAGACAGGAGGA 60.675 63.158 0.00 0.00 34.73 3.71
5637 8703 2.793288 TAAACCCCGGAATCTTGACC 57.207 50.000 0.73 0.00 0.00 4.02
5638 8704 0.039180 AAACCCCGGAATCTTGACCC 59.961 55.000 0.73 0.00 0.00 4.46
5664 8730 7.811713 CCAAAGTTCTTGAATTTGAAGGATCTC 59.188 37.037 14.07 0.00 36.28 2.75
5673 8739 1.153349 GAAGGATCTCGGCCGCTTT 60.153 57.895 23.51 9.16 0.00 3.51
5763 8862 4.702131 AGGAAACTGGTGCTTTATCATCAC 59.298 41.667 0.00 0.00 41.13 3.06
5816 9207 0.676466 TTTGACATGGGGTAGCAGCG 60.676 55.000 0.00 0.00 0.00 5.18
5835 9226 1.363885 GATGCATGCGCTGACAGTGA 61.364 55.000 20.12 5.50 39.64 3.41
5839 9230 1.643880 CATGCGCTGACAGTGATACA 58.356 50.000 20.12 8.58 0.00 2.29
6332 9731 1.115467 AGGAGTTGATAGGTCGCAGG 58.885 55.000 0.00 0.00 0.00 4.85
6334 9733 0.872021 GAGTTGATAGGTCGCAGGCG 60.872 60.000 7.46 7.46 41.35 5.52
6419 9818 1.996292 TCTCATGTTAGTCTGCGCAC 58.004 50.000 5.66 0.00 0.00 5.34
6448 9848 3.963383 AGTTTGAAACGTGATGGTGAC 57.037 42.857 1.97 0.00 36.23 3.67
6623 10023 9.999009 CATACTACATCTCGTTTTACTGACTTA 57.001 33.333 0.00 0.00 0.00 2.24
6640 10041 2.180159 TTAGACACCGCCTTGCCCTC 62.180 60.000 0.00 0.00 0.00 4.30
6655 10056 2.487428 CTCGTCACAGAGGCTCGG 59.513 66.667 13.28 13.28 34.74 4.63
6882 10308 8.466617 TTGCAGAAAACCACCTAGTAATTTTA 57.533 30.769 0.00 0.00 0.00 1.52
6891 10317 9.483916 AACCACCTAGTAATTTTATGCAAAAAC 57.516 29.630 0.00 0.00 37.20 2.43
6897 10323 6.517605 AGTAATTTTATGCAAAAACCACCGT 58.482 32.000 0.00 0.00 37.20 4.83
6921 10347 8.803799 CGTGTTTCTAGTAAACTTTTTGCAAAT 58.196 29.630 13.65 0.00 0.00 2.32
6959 10385 9.884636 GGTAATTTAGCCCATTTAATCACTTTT 57.115 29.630 0.00 0.00 0.00 2.27
6967 10393 6.146021 GCCCATTTAATCACTTTTTGACACAG 59.854 38.462 0.00 0.00 36.92 3.66
7055 10486 0.395311 CAATCAGCCCAGGACATGCT 60.395 55.000 0.00 0.00 35.25 3.79
7056 10487 0.333993 AATCAGCCCAGGACATGCTT 59.666 50.000 0.00 0.00 31.77 3.91
7058 10489 1.001764 CAGCCCAGGACATGCTTGA 60.002 57.895 6.60 0.00 31.77 3.02
7066 10497 0.035630 GGACATGCTTGACAGAGCCT 60.036 55.000 6.60 0.00 42.01 4.58
7163 10595 2.661866 AAGCACGTCAGCGACCAC 60.662 61.111 0.00 0.00 42.00 4.16
7182 10614 2.126071 GCTACAGGCTTCGTGCGA 60.126 61.111 0.00 0.00 44.05 5.10
7186 10618 4.680237 CAGGCTTCGTGCGACCCA 62.680 66.667 11.35 0.00 44.05 4.51
7189 10621 2.811317 GCTTCGTGCGACCCAGAG 60.811 66.667 0.00 0.00 0.00 3.35
7193 10625 1.248101 TTCGTGCGACCCAGAGATGA 61.248 55.000 0.00 0.00 0.00 2.92
7203 10635 0.755686 CCAGAGATGAGGCCAGTACC 59.244 60.000 5.01 0.00 0.00 3.34
7204 10636 1.690845 CCAGAGATGAGGCCAGTACCT 60.691 57.143 5.01 0.00 45.04 3.08
7207 10639 1.410882 GAGATGAGGCCAGTACCTGTC 59.589 57.143 5.01 0.00 41.32 3.51
7214 10646 0.108138 GCCAGTACCTGTCGCATCTT 60.108 55.000 0.00 0.00 0.00 2.40
7275 10707 4.462417 CGCCTCGCTCGTCGTCTT 62.462 66.667 0.00 0.00 39.67 3.01
7277 10709 3.041627 GCCTCGCTCGTCGTCTTCT 62.042 63.158 0.00 0.00 39.67 2.85
7278 10710 1.703438 GCCTCGCTCGTCGTCTTCTA 61.703 60.000 0.00 0.00 39.67 2.10
7279 10711 0.026544 CCTCGCTCGTCGTCTTCTAC 59.973 60.000 0.00 0.00 39.67 2.59
7280 10712 0.026544 CTCGCTCGTCGTCTTCTACC 59.973 60.000 0.00 0.00 39.67 3.18
7281 10713 1.062206 CGCTCGTCGTCTTCTACCC 59.938 63.158 0.00 0.00 0.00 3.69
7288 10720 2.183555 GTCTTCTACCCGTGCCCG 59.816 66.667 0.00 0.00 0.00 6.13
7290 10722 1.607178 TCTTCTACCCGTGCCCGAA 60.607 57.895 0.00 0.00 35.63 4.30
7292 10843 1.885163 CTTCTACCCGTGCCCGAAGT 61.885 60.000 0.00 0.00 35.63 3.01
7321 10872 2.360350 CACTCAAGGCCGCCACAT 60.360 61.111 13.15 0.00 0.00 3.21
7377 11100 2.981302 CCACGGACTCATGCTCCA 59.019 61.111 9.28 0.00 0.00 3.86
7382 11105 0.036952 CGGACTCATGCTCCAAGTGT 60.037 55.000 9.28 0.00 0.00 3.55
7394 11117 1.340248 TCCAAGTGTCGTTGTCCTCTC 59.660 52.381 0.00 0.00 0.00 3.20
7396 11119 2.557056 CCAAGTGTCGTTGTCCTCTCTA 59.443 50.000 0.00 0.00 0.00 2.43
7397 11120 3.005472 CCAAGTGTCGTTGTCCTCTCTAA 59.995 47.826 0.00 0.00 0.00 2.10
7398 11121 3.919223 AGTGTCGTTGTCCTCTCTAAC 57.081 47.619 0.00 0.00 0.00 2.34
7403 11126 1.204941 CGTTGTCCTCTCTAACCAGGG 59.795 57.143 0.00 0.00 0.00 4.45
7473 11290 4.666253 GGGGTGCAGGCAAGCTGA 62.666 66.667 0.00 0.00 34.99 4.26
7495 11312 4.183858 CGTGGTGGGTGTGGGTGT 62.184 66.667 0.00 0.00 0.00 4.16
7496 11313 2.809307 CGTGGTGGGTGTGGGTGTA 61.809 63.158 0.00 0.00 0.00 2.90
7497 11314 1.072505 GTGGTGGGTGTGGGTGTAG 59.927 63.158 0.00 0.00 0.00 2.74
7498 11315 2.150719 TGGTGGGTGTGGGTGTAGG 61.151 63.158 0.00 0.00 0.00 3.18
7499 11316 2.151388 GGTGGGTGTGGGTGTAGGT 61.151 63.158 0.00 0.00 0.00 3.08
7500 11317 1.373812 GTGGGTGTGGGTGTAGGTC 59.626 63.158 0.00 0.00 0.00 3.85
7501 11318 2.211410 TGGGTGTGGGTGTAGGTCG 61.211 63.158 0.00 0.00 0.00 4.79
7502 11319 2.047560 GGTGTGGGTGTAGGTCGC 60.048 66.667 0.00 0.00 0.00 5.19
7503 11320 2.431942 GTGTGGGTGTAGGTCGCG 60.432 66.667 0.00 0.00 0.00 5.87
7504 11321 3.687102 TGTGGGTGTAGGTCGCGG 61.687 66.667 6.13 0.00 0.00 6.46
7524 11341 4.803426 GCGACGACTGCCAGGAGG 62.803 72.222 0.00 0.00 38.23 4.30
7525 11342 3.374402 CGACGACTGCCAGGAGGT 61.374 66.667 0.00 0.00 37.19 3.85
7526 11343 2.932234 CGACGACTGCCAGGAGGTT 61.932 63.158 0.00 0.00 37.19 3.50
7527 11344 1.374758 GACGACTGCCAGGAGGTTG 60.375 63.158 0.00 0.00 37.19 3.77
7528 11345 2.743928 CGACTGCCAGGAGGTTGC 60.744 66.667 0.00 0.00 37.19 4.17
7529 11346 2.360475 GACTGCCAGGAGGTTGCC 60.360 66.667 0.00 0.00 37.19 4.52
7530 11347 4.335647 ACTGCCAGGAGGTTGCCG 62.336 66.667 0.00 0.00 37.19 5.69
7531 11348 4.020617 CTGCCAGGAGGTTGCCGA 62.021 66.667 0.00 0.00 37.19 5.54
7532 11349 3.551496 CTGCCAGGAGGTTGCCGAA 62.551 63.158 0.00 0.00 37.19 4.30
7533 11350 2.747855 GCCAGGAGGTTGCCGAAG 60.748 66.667 0.00 0.00 37.19 3.79
7552 11369 3.842923 CGCCGAGCATCTCCTGGT 61.843 66.667 0.00 0.00 38.60 4.00
7553 11370 2.202987 GCCGAGCATCTCCTGGTG 60.203 66.667 0.00 0.00 35.19 4.17
7554 11371 2.503061 CCGAGCATCTCCTGGTGG 59.497 66.667 0.00 0.00 35.19 4.61
7555 11372 2.503061 CGAGCATCTCCTGGTGGG 59.497 66.667 0.00 0.00 35.19 4.61
7556 11373 2.914289 GAGCATCTCCTGGTGGGG 59.086 66.667 0.00 0.00 35.19 4.96
7557 11374 2.693864 AGCATCTCCTGGTGGGGG 60.694 66.667 0.00 0.00 36.75 5.40
7561 11378 3.293821 TCTCCTGGTGGGGGAAGA 58.706 61.111 0.00 0.00 42.62 2.87
7562 11379 1.557085 TCTCCTGGTGGGGGAAGAA 59.443 57.895 0.00 0.00 42.62 2.52
7563 11380 0.547712 TCTCCTGGTGGGGGAAGAAG 60.548 60.000 0.00 0.00 42.62 2.85
7564 11381 0.547712 CTCCTGGTGGGGGAAGAAGA 60.548 60.000 0.00 0.00 37.96 2.87
7565 11382 0.104144 TCCTGGTGGGGGAAGAAGAA 60.104 55.000 0.00 0.00 35.33 2.52
7566 11383 1.002857 CCTGGTGGGGGAAGAAGAAT 58.997 55.000 0.00 0.00 0.00 2.40
7567 11384 1.359130 CCTGGTGGGGGAAGAAGAATT 59.641 52.381 0.00 0.00 0.00 2.17
7568 11385 2.450476 CTGGTGGGGGAAGAAGAATTG 58.550 52.381 0.00 0.00 0.00 2.32
7569 11386 1.077005 TGGTGGGGGAAGAAGAATTGG 59.923 52.381 0.00 0.00 0.00 3.16
7570 11387 1.186200 GTGGGGGAAGAAGAATTGGC 58.814 55.000 0.00 0.00 0.00 4.52
7571 11388 1.084018 TGGGGGAAGAAGAATTGGCT 58.916 50.000 0.00 0.00 0.00 4.75
7572 11389 1.005924 TGGGGGAAGAAGAATTGGCTC 59.994 52.381 0.00 0.00 0.00 4.70
7573 11390 1.383523 GGGGAAGAAGAATTGGCTCG 58.616 55.000 0.00 0.00 0.00 5.03
7574 11391 1.383523 GGGAAGAAGAATTGGCTCGG 58.616 55.000 0.00 0.00 0.00 4.63
7575 11392 1.383523 GGAAGAAGAATTGGCTCGGG 58.616 55.000 0.00 0.00 0.00 5.14
7576 11393 1.065418 GGAAGAAGAATTGGCTCGGGA 60.065 52.381 0.00 0.00 0.00 5.14
7577 11394 2.284190 GAAGAAGAATTGGCTCGGGAG 58.716 52.381 0.00 0.00 0.00 4.30
7578 11395 0.543749 AGAAGAATTGGCTCGGGAGG 59.456 55.000 0.00 0.00 0.00 4.30
7579 11396 0.253327 GAAGAATTGGCTCGGGAGGT 59.747 55.000 0.00 0.00 0.00 3.85
7580 11397 0.253327 AAGAATTGGCTCGGGAGGTC 59.747 55.000 0.00 0.00 0.00 3.85
7581 11398 0.909610 AGAATTGGCTCGGGAGGTCA 60.910 55.000 0.00 0.00 0.00 4.02
7582 11399 0.035439 GAATTGGCTCGGGAGGTCAA 60.035 55.000 0.00 0.00 0.00 3.18
7583 11400 0.322546 AATTGGCTCGGGAGGTCAAC 60.323 55.000 0.00 0.00 0.00 3.18
7584 11401 2.198304 ATTGGCTCGGGAGGTCAACC 62.198 60.000 0.00 0.00 0.00 3.77
7585 11402 4.097361 GGCTCGGGAGGTCAACCC 62.097 72.222 0.00 0.00 43.57 4.11
7586 11403 4.097361 GCTCGGGAGGTCAACCCC 62.097 72.222 0.00 0.00 44.09 4.95
7590 11407 2.926242 GGGAGGTCAACCCCGTCA 60.926 66.667 0.00 0.00 41.38 4.35
7591 11408 2.298661 GGGAGGTCAACCCCGTCAT 61.299 63.158 0.00 0.00 41.38 3.06
7592 11409 1.221021 GGAGGTCAACCCCGTCATC 59.779 63.158 0.00 0.00 36.42 2.92
7593 11410 1.221021 GAGGTCAACCCCGTCATCC 59.779 63.158 0.00 0.00 36.42 3.51
7594 11411 1.537889 AGGTCAACCCCGTCATCCA 60.538 57.895 0.00 0.00 36.42 3.41
7595 11412 0.914417 AGGTCAACCCCGTCATCCAT 60.914 55.000 0.00 0.00 36.42 3.41
7596 11413 0.034477 GGTCAACCCCGTCATCCATT 60.034 55.000 0.00 0.00 0.00 3.16
7597 11414 1.615919 GGTCAACCCCGTCATCCATTT 60.616 52.381 0.00 0.00 0.00 2.32
7598 11415 2.167662 GTCAACCCCGTCATCCATTTT 58.832 47.619 0.00 0.00 0.00 1.82
7599 11416 2.094752 GTCAACCCCGTCATCCATTTTG 60.095 50.000 0.00 0.00 0.00 2.44
7600 11417 1.892474 CAACCCCGTCATCCATTTTGT 59.108 47.619 0.00 0.00 0.00 2.83
7601 11418 1.544724 ACCCCGTCATCCATTTTGTG 58.455 50.000 0.00 0.00 0.00 3.33
7602 11419 1.074727 ACCCCGTCATCCATTTTGTGA 59.925 47.619 0.00 0.00 0.00 3.58
7603 11420 1.472480 CCCCGTCATCCATTTTGTGAC 59.528 52.381 0.00 0.00 39.02 3.67
7604 11421 2.158559 CCCGTCATCCATTTTGTGACA 58.841 47.619 5.70 0.00 41.69 3.58
7605 11422 2.162208 CCCGTCATCCATTTTGTGACAG 59.838 50.000 5.70 0.00 41.69 3.51
7606 11423 3.073678 CCGTCATCCATTTTGTGACAGA 58.926 45.455 5.70 0.00 41.69 3.41
7607 11424 3.501828 CCGTCATCCATTTTGTGACAGAA 59.498 43.478 5.70 0.00 41.69 3.02
7608 11425 4.156556 CCGTCATCCATTTTGTGACAGAAT 59.843 41.667 0.00 0.00 41.69 2.40
7609 11426 5.335897 CCGTCATCCATTTTGTGACAGAATT 60.336 40.000 0.00 0.00 41.69 2.17
7610 11427 5.570206 CGTCATCCATTTTGTGACAGAATTG 59.430 40.000 0.00 0.00 41.69 2.32
7611 11428 6.449698 GTCATCCATTTTGTGACAGAATTGT 58.550 36.000 0.00 0.00 41.35 2.71
7612 11429 7.572910 CGTCATCCATTTTGTGACAGAATTGTA 60.573 37.037 0.00 0.00 41.69 2.41
7613 11430 8.246180 GTCATCCATTTTGTGACAGAATTGTAT 58.754 33.333 0.00 0.00 41.35 2.29
7614 11431 8.245491 TCATCCATTTTGTGACAGAATTGTATG 58.755 33.333 0.00 4.18 37.76 2.39
7615 11432 6.389091 TCCATTTTGTGACAGAATTGTATGC 58.611 36.000 0.00 0.00 37.76 3.14
7616 11433 5.577945 CCATTTTGTGACAGAATTGTATGCC 59.422 40.000 0.00 0.00 37.76 4.40
7617 11434 5.781210 TTTTGTGACAGAATTGTATGCCA 57.219 34.783 0.00 0.00 37.76 4.92
7618 11435 5.781210 TTTGTGACAGAATTGTATGCCAA 57.219 34.783 0.00 0.00 37.76 4.52
7619 11436 5.375417 TTGTGACAGAATTGTATGCCAAG 57.625 39.130 0.00 0.00 37.76 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.385267 TGGATTGGTTTCGATCAAATTCATTT 58.615 30.769 0.00 0.00 35.87 2.32
1 2 6.934056 TGGATTGGTTTCGATCAAATTCATT 58.066 32.000 0.00 0.00 35.87 2.57
2 3 6.528537 TGGATTGGTTTCGATCAAATTCAT 57.471 33.333 0.00 0.00 35.87 2.57
3 4 5.973899 TGGATTGGTTTCGATCAAATTCA 57.026 34.783 0.00 0.00 35.87 2.57
17 18 3.541242 TTTGGACTGGATTGGATTGGT 57.459 42.857 0.00 0.00 0.00 3.67
41 42 7.615365 ACATGCTTAGGGAAATGTTAGATTTGA 59.385 33.333 0.00 0.00 28.99 2.69
100 101 1.300481 GATTTGTTCCGCCTCCTAGC 58.700 55.000 0.00 0.00 0.00 3.42
155 157 2.201022 GGCTATTCTCCTCGCCCGA 61.201 63.158 0.00 0.00 36.56 5.14
156 158 2.340443 GGCTATTCTCCTCGCCCG 59.660 66.667 0.00 0.00 36.56 6.13
159 161 0.389166 CATCGGGCTATTCTCCTCGC 60.389 60.000 0.00 0.00 0.00 5.03
171 173 1.137872 AGACTCATGTTCTCATCGGGC 59.862 52.381 0.00 0.00 31.15 6.13
176 178 2.837947 TGGGGAGACTCATGTTCTCAT 58.162 47.619 21.21 0.00 34.24 2.90
185 187 1.482182 CATCATCGTTGGGGAGACTCA 59.518 52.381 4.53 0.00 40.98 3.41
187 189 0.833287 CCATCATCGTTGGGGAGACT 59.167 55.000 0.00 0.00 0.00 3.24
196 198 3.086282 GGTTACAAACCCCATCATCGTT 58.914 45.455 0.00 0.00 46.12 3.85
218 220 2.549563 GCATCACGAGGACCATGATCAT 60.550 50.000 1.18 1.18 30.58 2.45
240 242 2.484889 GCTCATCCTTAACATCCCGAC 58.515 52.381 0.00 0.00 0.00 4.79
241 243 1.068588 CGCTCATCCTTAACATCCCGA 59.931 52.381 0.00 0.00 0.00 5.14
250 252 1.816835 ACAACGAGACGCTCATCCTTA 59.183 47.619 7.47 0.00 0.00 2.69
262 264 0.756294 TCTTGGGCTCAACAACGAGA 59.244 50.000 0.00 0.00 34.79 4.04
263 265 1.466167 CATCTTGGGCTCAACAACGAG 59.534 52.381 0.00 0.00 36.02 4.18
264 266 1.071542 TCATCTTGGGCTCAACAACGA 59.928 47.619 0.00 0.00 0.00 3.85
268 270 2.783135 GTTCTCATCTTGGGCTCAACA 58.217 47.619 0.00 0.00 0.00 3.33
271 273 0.976641 ACGTTCTCATCTTGGGCTCA 59.023 50.000 0.00 0.00 0.00 4.26
274 276 0.721718 CGAACGTTCTCATCTTGGGC 59.278 55.000 24.80 0.00 0.00 5.36
286 408 1.885850 GTCACCAGTGCCGAACGTT 60.886 57.895 0.00 0.00 0.00 3.99
291 413 3.680786 CTCCGTCACCAGTGCCGA 61.681 66.667 2.35 0.00 0.00 5.54
298 420 3.695606 GCTCCAGCTCCGTCACCA 61.696 66.667 0.00 0.00 38.21 4.17
317 439 3.826265 AATGCACCACCCCACCACC 62.826 63.158 0.00 0.00 0.00 4.61
319 441 2.203611 CAATGCACCACCCCACCA 60.204 61.111 0.00 0.00 0.00 4.17
326 448 2.562912 CACGAGCCAATGCACCAC 59.437 61.111 0.00 0.00 41.13 4.16
339 461 2.048597 GTGATGTCACGGGCACGA 60.049 61.111 19.19 0.00 44.60 4.35
355 477 1.476477 GCGACTTCCCCTCTCTTAGT 58.524 55.000 0.00 0.00 0.00 2.24
356 478 0.747852 GGCGACTTCCCCTCTCTTAG 59.252 60.000 0.00 0.00 0.00 2.18
377 499 3.574396 CCAGGATCTCGCCATAGTTCTTA 59.426 47.826 0.00 0.00 0.00 2.10
397 519 2.129555 GACCTTGCCTCTTCCAGCCA 62.130 60.000 0.00 0.00 0.00 4.75
415 537 0.543410 TAGGAGAGGTGGTTTGCCGA 60.543 55.000 0.00 0.00 37.67 5.54
417 539 0.253327 CCTAGGAGAGGTGGTTTGCC 59.747 60.000 1.05 0.00 40.98 4.52
437 559 2.594303 TTGTCAGCAGCAACCCCG 60.594 61.111 0.00 0.00 0.00 5.73
449 571 1.191535 CCCTACTCCCATCGTTGTCA 58.808 55.000 0.00 0.00 0.00 3.58
454 576 1.233369 CTCCCCCTACTCCCATCGT 59.767 63.158 0.00 0.00 0.00 3.73
465 587 4.635963 AAAGCCACCCCTCCCCCT 62.636 66.667 0.00 0.00 0.00 4.79
506 629 3.068024 CACTTACTCCTCTCTCCTGCATC 59.932 52.174 0.00 0.00 0.00 3.91
507 630 3.030291 CACTTACTCCTCTCTCCTGCAT 58.970 50.000 0.00 0.00 0.00 3.96
511 634 3.332485 AGACACACTTACTCCTCTCTCCT 59.668 47.826 0.00 0.00 0.00 3.69
512 635 3.442273 CAGACACACTTACTCCTCTCTCC 59.558 52.174 0.00 0.00 0.00 3.71
514 637 4.374689 TCAGACACACTTACTCCTCTCT 57.625 45.455 0.00 0.00 0.00 3.10
520 643 5.061064 CACGCTAATTCAGACACACTTACTC 59.939 44.000 0.00 0.00 0.00 2.59
521 644 4.923871 CACGCTAATTCAGACACACTTACT 59.076 41.667 0.00 0.00 0.00 2.24
522 645 4.684703 ACACGCTAATTCAGACACACTTAC 59.315 41.667 0.00 0.00 0.00 2.34
523 646 4.684242 CACACGCTAATTCAGACACACTTA 59.316 41.667 0.00 0.00 0.00 2.24
524 647 3.494626 CACACGCTAATTCAGACACACTT 59.505 43.478 0.00 0.00 0.00 3.16
525 648 3.059884 CACACGCTAATTCAGACACACT 58.940 45.455 0.00 0.00 0.00 3.55
526 649 3.057019 TCACACGCTAATTCAGACACAC 58.943 45.455 0.00 0.00 0.00 3.82
527 650 3.317150 CTCACACGCTAATTCAGACACA 58.683 45.455 0.00 0.00 0.00 3.72
528 651 2.668457 CCTCACACGCTAATTCAGACAC 59.332 50.000 0.00 0.00 0.00 3.67
529 652 2.299013 ACCTCACACGCTAATTCAGACA 59.701 45.455 0.00 0.00 0.00 3.41
537 675 1.324383 TCAGTCACCTCACACGCTAA 58.676 50.000 0.00 0.00 0.00 3.09
556 694 2.428890 CTCATAACTCCCACGCTCTCTT 59.571 50.000 0.00 0.00 0.00 2.85
563 701 1.743958 AGACGTCTCATAACTCCCACG 59.256 52.381 13.58 0.00 0.00 4.94
581 719 3.244561 GGGAATTGCGGGAGATGATAAGA 60.245 47.826 0.00 0.00 0.00 2.10
585 723 0.846015 TGGGAATTGCGGGAGATGAT 59.154 50.000 0.00 0.00 0.00 2.45
587 725 0.394216 TGTGGGAATTGCGGGAGATG 60.394 55.000 0.00 0.00 0.00 2.90
588 726 0.394352 GTGTGGGAATTGCGGGAGAT 60.394 55.000 0.00 0.00 0.00 2.75
596 734 3.429822 GCTCAATCCATGTGTGGGAATTG 60.430 47.826 0.00 0.00 46.06 2.32
597 735 2.762327 GCTCAATCCATGTGTGGGAATT 59.238 45.455 0.00 0.00 46.06 2.17
601 739 0.392863 TCGCTCAATCCATGTGTGGG 60.393 55.000 0.00 0.00 46.06 4.61
606 744 3.449018 AGTTAGTCTCGCTCAATCCATGT 59.551 43.478 0.00 0.00 0.00 3.21
630 1153 3.009723 TCCTGAATCGTCCATCTTTTGC 58.990 45.455 0.00 0.00 0.00 3.68
636 1159 2.168521 TGGAACTCCTGAATCGTCCATC 59.831 50.000 0.00 0.00 36.82 3.51
638 1161 1.639722 TGGAACTCCTGAATCGTCCA 58.360 50.000 0.00 0.00 36.82 4.02
648 1171 7.922699 AAAGTAGCTCTATATTGGAACTCCT 57.077 36.000 0.00 0.00 36.82 3.69
662 1185 5.221009 CCCGTACGAAGATTAAAGTAGCTCT 60.221 44.000 18.76 0.00 0.00 4.09
663 1186 4.974888 CCCGTACGAAGATTAAAGTAGCTC 59.025 45.833 18.76 0.00 0.00 4.09
666 1189 4.047142 GGCCCGTACGAAGATTAAAGTAG 58.953 47.826 18.76 0.00 0.00 2.57
667 1190 3.489059 CGGCCCGTACGAAGATTAAAGTA 60.489 47.826 18.76 0.00 0.00 2.24
668 1191 2.736400 CGGCCCGTACGAAGATTAAAGT 60.736 50.000 18.76 0.00 0.00 2.66
669 1192 1.856597 CGGCCCGTACGAAGATTAAAG 59.143 52.381 18.76 0.00 0.00 1.85
670 1193 1.476085 TCGGCCCGTACGAAGATTAAA 59.524 47.619 18.76 0.00 37.42 1.52
671 1194 1.102154 TCGGCCCGTACGAAGATTAA 58.898 50.000 18.76 0.00 37.42 1.40
672 1195 1.102154 TTCGGCCCGTACGAAGATTA 58.898 50.000 18.76 0.00 44.41 1.75
673 1196 1.892338 TTCGGCCCGTACGAAGATT 59.108 52.632 18.76 0.00 44.41 2.40
674 1197 3.607163 TTCGGCCCGTACGAAGAT 58.393 55.556 18.76 0.00 44.41 2.40
678 1201 0.531532 TTGTTTTTCGGCCCGTACGA 60.532 50.000 18.76 0.00 38.78 3.43
679 1202 0.307146 TTTGTTTTTCGGCCCGTACG 59.693 50.000 8.69 8.69 0.00 3.67
680 1203 2.710220 ATTTGTTTTTCGGCCCGTAC 57.290 45.000 1.63 0.00 0.00 3.67
681 1204 5.184711 ACTATATTTGTTTTTCGGCCCGTA 58.815 37.500 1.63 0.00 0.00 4.02
682 1205 4.011698 ACTATATTTGTTTTTCGGCCCGT 58.988 39.130 1.63 0.00 0.00 5.28
683 1206 4.334481 AGACTATATTTGTTTTTCGGCCCG 59.666 41.667 0.00 0.00 0.00 6.13
684 1207 5.830000 AGACTATATTTGTTTTTCGGCCC 57.170 39.130 0.00 0.00 0.00 5.80
685 1208 7.148373 TGTGTAGACTATATTTGTTTTTCGGCC 60.148 37.037 0.00 0.00 0.00 6.13
686 1209 7.745015 TGTGTAGACTATATTTGTTTTTCGGC 58.255 34.615 0.00 0.00 0.00 5.54
687 1210 9.537848 GTTGTGTAGACTATATTTGTTTTTCGG 57.462 33.333 0.00 0.00 0.00 4.30
688 1211 9.537848 GGTTGTGTAGACTATATTTGTTTTTCG 57.462 33.333 0.00 0.00 0.00 3.46
700 1223 9.920946 ATTGGATTATTTGGTTGTGTAGACTAT 57.079 29.630 0.00 0.00 0.00 2.12
701 1224 9.747898 AATTGGATTATTTGGTTGTGTAGACTA 57.252 29.630 0.00 0.00 0.00 2.59
702 1225 8.650143 AATTGGATTATTTGGTTGTGTAGACT 57.350 30.769 0.00 0.00 0.00 3.24
703 1226 7.973944 GGAATTGGATTATTTGGTTGTGTAGAC 59.026 37.037 0.00 0.00 0.00 2.59
704 1227 7.671819 TGGAATTGGATTATTTGGTTGTGTAGA 59.328 33.333 0.00 0.00 0.00 2.59
705 1228 7.835822 TGGAATTGGATTATTTGGTTGTGTAG 58.164 34.615 0.00 0.00 0.00 2.74
706 1229 7.782897 TGGAATTGGATTATTTGGTTGTGTA 57.217 32.000 0.00 0.00 0.00 2.90
707 1230 6.678568 TGGAATTGGATTATTTGGTTGTGT 57.321 33.333 0.00 0.00 0.00 3.72
708 1231 7.823310 TGAATGGAATTGGATTATTTGGTTGTG 59.177 33.333 0.00 0.00 36.07 3.33
709 1232 7.915930 TGAATGGAATTGGATTATTTGGTTGT 58.084 30.769 0.00 0.00 36.07 3.32
710 1233 8.789825 TTGAATGGAATTGGATTATTTGGTTG 57.210 30.769 0.00 0.00 36.07 3.77
711 1234 8.824783 TCTTGAATGGAATTGGATTATTTGGTT 58.175 29.630 0.00 0.00 36.07 3.67
712 1235 8.378115 TCTTGAATGGAATTGGATTATTTGGT 57.622 30.769 0.00 0.00 36.07 3.67
713 1236 9.268268 CATCTTGAATGGAATTGGATTATTTGG 57.732 33.333 0.00 0.00 36.07 3.28
714 1237 9.268268 CCATCTTGAATGGAATTGGATTATTTG 57.732 33.333 0.00 0.00 41.64 2.32
715 1238 9.216148 TCCATCTTGAATGGAATTGGATTATTT 57.784 29.630 4.30 0.00 44.54 1.40
716 1239 8.786710 TCCATCTTGAATGGAATTGGATTATT 57.213 30.769 4.30 0.00 44.54 1.40
728 1251 8.687292 TTCTCAATTAGATCCATCTTGAATGG 57.313 34.615 0.00 0.00 38.32 3.16
754 1277 9.856488 CGAAGGTTAAAGCAGCTCTATATATTA 57.144 33.333 0.00 0.00 0.00 0.98
755 1278 8.368668 ACGAAGGTTAAAGCAGCTCTATATATT 58.631 33.333 0.00 0.00 0.00 1.28
756 1279 7.897864 ACGAAGGTTAAAGCAGCTCTATATAT 58.102 34.615 0.00 0.00 0.00 0.86
757 1280 7.286215 ACGAAGGTTAAAGCAGCTCTATATA 57.714 36.000 0.00 0.00 0.00 0.86
758 1281 6.163135 ACGAAGGTTAAAGCAGCTCTATAT 57.837 37.500 0.00 0.00 0.00 0.86
759 1282 5.593679 ACGAAGGTTAAAGCAGCTCTATA 57.406 39.130 0.00 0.00 0.00 1.31
760 1283 4.473477 ACGAAGGTTAAAGCAGCTCTAT 57.527 40.909 0.00 0.00 0.00 1.98
761 1284 3.955650 ACGAAGGTTAAAGCAGCTCTA 57.044 42.857 0.00 0.00 0.00 2.43
784 1307 3.498777 GGGCTATATCTGTTTTTCGGCTC 59.501 47.826 0.00 0.00 0.00 4.70
785 1308 3.118038 TGGGCTATATCTGTTTTTCGGCT 60.118 43.478 0.00 0.00 0.00 5.52
790 1317 6.663093 TGATTGTGTGGGCTATATCTGTTTTT 59.337 34.615 0.00 0.00 0.00 1.94
801 1328 4.578516 CGGATTATTTGATTGTGTGGGCTA 59.421 41.667 0.00 0.00 0.00 3.93
808 1335 9.518906 TGAATGAAATCGGATTATTTGATTGTG 57.481 29.630 3.22 0.00 34.26 3.33
813 1340 9.955208 CATCTTGAATGAAATCGGATTATTTGA 57.045 29.630 3.22 2.97 0.00 2.69
838 1365 6.834107 TCTGCATTATTCTCAATCAGATCCA 58.166 36.000 0.00 0.00 0.00 3.41
842 1369 7.147672 TGGTACTCTGCATTATTCTCAATCAGA 60.148 37.037 0.00 0.00 0.00 3.27
862 1389 1.671850 CCTCGTGATGCGTTTGGTACT 60.672 52.381 0.00 0.00 42.13 2.73
863 1390 0.719465 CCTCGTGATGCGTTTGGTAC 59.281 55.000 0.00 0.00 42.13 3.34
873 1400 0.322456 TTTCTTGGGCCCTCGTGATG 60.322 55.000 25.70 4.32 0.00 3.07
874 1401 0.035056 CTTTCTTGGGCCCTCGTGAT 60.035 55.000 25.70 0.00 0.00 3.06
878 1405 0.881796 GAAACTTTCTTGGGCCCTCG 59.118 55.000 25.70 14.18 0.00 4.63
879 1406 1.203063 AGGAAACTTTCTTGGGCCCTC 60.203 52.381 25.70 8.47 37.44 4.30
880 1407 0.860457 AGGAAACTTTCTTGGGCCCT 59.140 50.000 25.70 0.00 37.44 5.19
881 1408 1.203063 AGAGGAAACTTTCTTGGGCCC 60.203 52.381 17.59 17.59 44.43 5.80
916 1443 0.949397 GACGCGGGAGGAAACTTTTT 59.051 50.000 12.47 0.00 44.43 1.94
935 1462 3.563808 ACTCTATCTGACAGAGCGCTTAG 59.436 47.826 13.26 10.24 42.80 2.18
940 1467 1.606668 GGGACTCTATCTGACAGAGCG 59.393 57.143 12.70 4.51 42.80 5.03
1248 1775 2.108250 TCACCAAAAGAAGGAAGAGGGG 59.892 50.000 0.00 0.00 0.00 4.79
1389 1918 6.417191 ACATTTGCACGATTTATCTACGTT 57.583 33.333 0.00 0.00 38.18 3.99
1470 1999 3.479866 AAATTGGGGGAGCTGAAATCT 57.520 42.857 0.00 0.00 0.00 2.40
1471 2000 3.771479 AGAAAATTGGGGGAGCTGAAATC 59.229 43.478 0.00 0.00 0.00 2.17
1472 2001 3.516700 CAGAAAATTGGGGGAGCTGAAAT 59.483 43.478 0.00 0.00 0.00 2.17
1473 2002 2.899256 CAGAAAATTGGGGGAGCTGAAA 59.101 45.455 0.00 0.00 0.00 2.69
1474 2003 2.158325 ACAGAAAATTGGGGGAGCTGAA 60.158 45.455 0.00 0.00 0.00 3.02
1486 2015 3.003689 CGACAGGTGCTTCACAGAAAATT 59.996 43.478 0.00 0.00 35.86 1.82
1492 2021 1.800805 AATCGACAGGTGCTTCACAG 58.199 50.000 0.00 0.00 35.86 3.66
1494 2023 2.960819 ACTAATCGACAGGTGCTTCAC 58.039 47.619 0.00 0.00 0.00 3.18
1501 2030 5.419155 TCTGAATCAGAACTAATCGACAGGT 59.581 40.000 10.99 0.00 37.57 4.00
1569 2098 5.821516 TTTTTAAACGAAGGCTCAAGTCA 57.178 34.783 0.00 0.00 0.00 3.41
1776 2308 0.621082 TATCAAACACCCCATCGCCA 59.379 50.000 0.00 0.00 0.00 5.69
2490 3022 3.964909 CAAAGTGCTTTGTAGACCAACC 58.035 45.455 14.55 0.00 43.52 3.77
2510 3042 4.650754 GGTTTCTAGCGATTAGTCCTCA 57.349 45.455 0.00 0.00 0.00 3.86
2542 3083 1.542915 CCAACCTCAGTGAATGCCAAG 59.457 52.381 0.00 0.00 0.00 3.61
2554 3095 0.768622 ACGACCAAATCCCAACCTCA 59.231 50.000 0.00 0.00 0.00 3.86
2555 3096 1.165270 CACGACCAAATCCCAACCTC 58.835 55.000 0.00 0.00 0.00 3.85
2702 3243 5.827797 CCCTGTATATGTTATGCTGTTTGGT 59.172 40.000 0.00 0.00 0.00 3.67
2725 3266 4.864704 TTGGAAGGAATAACTTTGCACC 57.135 40.909 0.00 0.00 35.91 5.01
2987 3532 5.398169 TGTTGAACTTGTAAACTTGCACTG 58.602 37.500 0.00 0.00 0.00 3.66
3073 3619 4.219115 GGAGACCTAAGAGGATGATGTCA 58.781 47.826 0.00 0.00 37.67 3.58
3181 3727 3.879295 CCTGTGGATTGGCTATACAACTG 59.121 47.826 0.00 0.00 32.39 3.16
3256 3802 8.063038 TCATTTTTCTGTTTCATCAAAAATGCG 58.937 29.630 17.81 3.25 46.44 4.73
3447 4004 4.718961 AGGGTATGGAACTACAATCATGC 58.281 43.478 0.00 0.00 0.00 4.06
3485 5492 6.093909 TGCAATAATGAATCCATGCTATACCG 59.906 38.462 0.00 0.00 32.36 4.02
3621 5628 0.530431 GCCTTGTTGGTGTGCTTTGG 60.530 55.000 0.00 0.00 38.35 3.28
3626 5633 2.028043 GCAGCCTTGTTGGTGTGC 59.972 61.111 0.00 0.00 39.51 4.57
3635 5642 0.314935 AATTGACCAACGCAGCCTTG 59.685 50.000 0.00 0.00 0.00 3.61
3636 5643 1.904287 TAATTGACCAACGCAGCCTT 58.096 45.000 0.00 0.00 0.00 4.35
3640 5647 3.242739 GCAGGTATAATTGACCAACGCAG 60.243 47.826 12.46 0.00 39.65 5.18
3729 5744 4.479786 AAGACAATGCTTAGGAGGAGTC 57.520 45.455 0.00 0.00 0.00 3.36
3730 5745 4.917906 AAAGACAATGCTTAGGAGGAGT 57.082 40.909 0.00 0.00 0.00 3.85
3731 5746 5.292101 CGTTAAAGACAATGCTTAGGAGGAG 59.708 44.000 0.00 0.00 0.00 3.69
3733 5748 4.935808 ACGTTAAAGACAATGCTTAGGAGG 59.064 41.667 0.00 0.00 0.00 4.30
4028 6044 7.393234 GCTGATGAGATAGGACTAAGTGACTAT 59.607 40.741 0.00 0.00 0.00 2.12
4210 6405 4.830573 GCTTCAAAGCCCTCACCT 57.169 55.556 3.27 0.00 46.20 4.00
4250 6445 3.192001 TGGCAGCTGATTTCAGATCAAAC 59.808 43.478 20.43 0.00 46.59 2.93
4345 6540 7.016858 ACCTTCAAAGTTCAACCTAGGTATACA 59.983 37.037 16.67 0.00 33.22 2.29
4505 6704 6.208797 GGCCTAGTGACTAATTTCCAAAAAGT 59.791 38.462 0.00 0.00 0.00 2.66
4556 6755 0.530288 GTGACAGCCCTCTCTCAGAC 59.470 60.000 0.00 0.00 0.00 3.51
4559 6758 1.228583 ACGTGACAGCCCTCTCTCA 60.229 57.895 0.00 0.00 0.00 3.27
4568 6767 0.889306 ACTAAGGAGGACGTGACAGC 59.111 55.000 0.00 0.00 0.00 4.40
4581 6780 5.622233 GCCATTTTTGTTGCTCCTACTAAGG 60.622 44.000 0.00 0.00 45.21 2.69
4582 6781 5.402398 GCCATTTTTGTTGCTCCTACTAAG 58.598 41.667 0.00 0.00 0.00 2.18
4583 6782 4.219725 GGCCATTTTTGTTGCTCCTACTAA 59.780 41.667 0.00 0.00 0.00 2.24
4584 6783 3.761752 GGCCATTTTTGTTGCTCCTACTA 59.238 43.478 0.00 0.00 0.00 1.82
4585 6784 2.562738 GGCCATTTTTGTTGCTCCTACT 59.437 45.455 0.00 0.00 0.00 2.57
4586 6785 2.562738 AGGCCATTTTTGTTGCTCCTAC 59.437 45.455 5.01 0.00 0.00 3.18
4587 6786 2.825532 GAGGCCATTTTTGTTGCTCCTA 59.174 45.455 5.01 0.00 0.00 2.94
4588 6787 1.620323 GAGGCCATTTTTGTTGCTCCT 59.380 47.619 5.01 0.00 0.00 3.69
4589 6788 1.344114 TGAGGCCATTTTTGTTGCTCC 59.656 47.619 5.01 0.00 0.00 4.70
4590 6789 2.818130 TGAGGCCATTTTTGTTGCTC 57.182 45.000 5.01 0.00 0.00 4.26
4591 6790 2.633967 TGATGAGGCCATTTTTGTTGCT 59.366 40.909 5.01 0.00 32.09 3.91
4638 6858 4.284550 TGGCTGGGCAAGGACCAC 62.285 66.667 0.00 0.00 34.69 4.16
4730 6959 1.465200 GGCGACCCTCTATCACCTCC 61.465 65.000 0.00 0.00 0.00 4.30
4808 7037 0.251832 TTCACTTCCTCCTCCTCGCT 60.252 55.000 0.00 0.00 0.00 4.93
4824 7053 4.344865 GGGTGGCCGCCTTCTTCA 62.345 66.667 33.66 0.00 0.00 3.02
4828 7057 3.140814 GATTGGGTGGCCGCCTTC 61.141 66.667 33.66 22.99 0.00 3.46
4941 7178 2.163826 CAACAAGCGATCGATGTTGG 57.836 50.000 35.29 25.13 46.28 3.77
4953 7190 1.230324 GAGACTCCACCACAACAAGC 58.770 55.000 0.00 0.00 0.00 4.01
4961 7198 3.398318 TTATGCTAGGAGACTCCACCA 57.602 47.619 23.60 16.04 43.67 4.17
4972 7209 7.156876 TCTTTTTGTCCACAATTATGCTAGG 57.843 36.000 0.00 0.00 35.55 3.02
5077 7314 4.493547 TCATGGCTAAAATTTCGGCAAAG 58.506 39.130 16.79 13.36 36.78 2.77
5241 7512 2.851195 ACTGGTGCGTTCTTCAAATCT 58.149 42.857 0.00 0.00 0.00 2.40
5256 7527 0.616891 GTCCGGATGGGTTTACTGGT 59.383 55.000 7.81 0.00 37.00 4.00
5299 7570 2.046023 CAAGGCGGCTGTCATGGA 60.046 61.111 14.21 0.00 0.00 3.41
5375 7652 2.354704 CGCCCTTATGACTTCAACTGGA 60.355 50.000 0.00 0.00 0.00 3.86
5416 8481 2.289002 GGAGCACCATTCTTTATCTGCG 59.711 50.000 0.00 0.00 35.97 5.18
5498 8563 1.136329 TGGAGCAAGCCCCTCTTCTT 61.136 55.000 0.00 0.00 31.27 2.52
5591 8656 0.313987 GGTTGAAAAGACTTGGGCGG 59.686 55.000 0.00 0.00 0.00 6.13
5600 8665 4.891168 GGTTTAAGGAGGTGGTTGAAAAGA 59.109 41.667 0.00 0.00 0.00 2.52
5637 8703 6.160576 TCCTTCAAATTCAAGAACTTTGGG 57.839 37.500 12.98 9.67 32.15 4.12
5638 8704 7.664758 AGATCCTTCAAATTCAAGAACTTTGG 58.335 34.615 12.98 0.00 32.15 3.28
5744 8842 3.441572 GCTGTGATGATAAAGCACCAGTT 59.558 43.478 0.00 0.00 44.87 3.16
5763 8862 4.446371 CAGGAATCTAAGTTAGGTGGCTG 58.554 47.826 10.02 0.00 0.00 4.85
5816 9207 1.062047 CACTGTCAGCGCATGCATC 59.938 57.895 19.57 8.73 46.23 3.91
5835 9226 2.102578 GAACTGCCCCAATTGCTGTAT 58.897 47.619 0.00 0.00 39.56 2.29
5839 9230 1.551883 GATTGAACTGCCCCAATTGCT 59.448 47.619 0.00 0.00 33.57 3.91
5968 9362 1.761174 GTCTGCCTCCTTTGTCCCA 59.239 57.895 0.00 0.00 0.00 4.37
6162 9561 3.864003 GCGTGTTAGAAGATCCTACCAAC 59.136 47.826 0.00 0.00 0.00 3.77
6310 9709 1.476891 TGCGACCTATCAACTCCTGTC 59.523 52.381 0.00 0.00 0.00 3.51
6332 9731 8.662141 TCTAATTTTTATATAATCCGCCTTCGC 58.338 33.333 0.00 0.00 0.00 4.70
6419 9818 4.649977 TCACGTTTCAAACTTGTAAACCG 58.350 39.130 6.65 0.00 32.94 4.44
6448 9848 8.720909 TGTTTCACACAACATGAATAATAACG 57.279 30.769 0.00 0.00 36.02 3.18
6483 9883 3.393800 GAGAGCAGAGCACACAAGTTAA 58.606 45.455 0.00 0.00 0.00 2.01
6523 9923 1.379044 CTCCCAATCACCAGCCACC 60.379 63.158 0.00 0.00 0.00 4.61
6623 10023 4.021925 GAGGGCAAGGCGGTGTCT 62.022 66.667 0.00 0.00 0.00 3.41
6640 10041 1.306642 ACTACCGAGCCTCTGTGACG 61.307 60.000 0.00 0.00 0.00 4.35
6655 10056 6.433093 ACCATCCAAACATCAGGTTAAACTAC 59.567 38.462 0.00 0.00 39.29 2.73
6802 10224 2.930019 CCCTGACCTGAGGGCACA 60.930 66.667 0.82 0.00 46.65 4.57
6847 10269 3.567585 TGGTTTTCTGCAATCGATGTTCA 59.432 39.130 0.00 0.00 0.00 3.18
6849 10271 3.305335 GGTGGTTTTCTGCAATCGATGTT 60.305 43.478 0.00 0.00 0.00 2.71
6882 10308 2.167487 AGAAACACGGTGGTTTTTGCAT 59.833 40.909 13.42 0.00 40.85 3.96
6891 10317 5.996669 AAAGTTTACTAGAAACACGGTGG 57.003 39.130 13.48 0.00 32.81 4.61
6927 10353 7.504924 TTAAATGGGCTAAATTACCTGATCG 57.495 36.000 0.00 0.00 0.00 3.69
6959 10385 3.246112 CCCGGTCCCCTGTGTCAA 61.246 66.667 0.00 0.00 0.00 3.18
6967 10393 3.793888 CCTTACAGCCCGGTCCCC 61.794 72.222 0.00 0.00 0.00 4.81
6976 10402 1.731720 CCAAGTCAGCTCCTTACAGC 58.268 55.000 0.00 0.00 39.99 4.40
7046 10475 0.035630 GGCTCTGTCAAGCATGTCCT 60.036 55.000 0.00 0.00 44.35 3.85
7055 10486 2.033141 GGCAGCAGGCTCTGTCAA 59.967 61.111 11.88 0.00 44.01 3.18
7066 10497 2.824546 GATGGGATCGAGGCAGCA 59.175 61.111 0.00 0.00 0.00 4.41
7182 10614 0.339859 TACTGGCCTCATCTCTGGGT 59.660 55.000 3.32 0.00 0.00 4.51
7236 10668 3.158648 CCCACTTCCCGGCGGATA 61.159 66.667 30.79 12.79 38.24 2.59
7264 10696 1.062206 CGGGTAGAAGACGACGAGC 59.938 63.158 0.00 0.00 32.63 5.03
7271 10703 1.880819 TTCGGGCACGGGTAGAAGAC 61.881 60.000 9.32 0.00 41.39 3.01
7275 10707 2.283388 ACTTCGGGCACGGGTAGA 60.283 61.111 9.32 0.00 41.39 2.59
7277 10709 3.751246 CGACTTCGGGCACGGGTA 61.751 66.667 9.32 0.00 41.39 3.69
7305 10856 2.360350 CATGTGGCGGCCTTGAGT 60.360 61.111 21.46 0.00 0.00 3.41
7362 11085 0.036952 CACTTGGAGCATGAGTCCGT 60.037 55.000 0.00 0.00 36.82 4.69
7366 11089 0.681733 ACGACACTTGGAGCATGAGT 59.318 50.000 0.00 0.00 0.00 3.41
7377 11100 3.005578 GGTTAGAGAGGACAACGACACTT 59.994 47.826 0.00 0.00 0.00 3.16
7382 11105 2.168496 CCTGGTTAGAGAGGACAACGA 58.832 52.381 0.00 0.00 0.00 3.85
7394 11117 2.487934 CAGATTCGATGCCCTGGTTAG 58.512 52.381 0.00 0.00 0.00 2.34
7396 11119 0.107017 CCAGATTCGATGCCCTGGTT 60.107 55.000 12.14 0.00 40.84 3.67
7397 11120 0.982852 TCCAGATTCGATGCCCTGGT 60.983 55.000 16.97 0.00 44.80 4.00
7398 11121 0.533755 GTCCAGATTCGATGCCCTGG 60.534 60.000 13.47 13.47 45.63 4.45
7403 11126 0.179084 TTCCCGTCCAGATTCGATGC 60.179 55.000 0.00 0.00 0.00 3.91
7480 11297 2.150719 CCTACACCCACACCCACCA 61.151 63.158 0.00 0.00 0.00 4.17
7481 11298 2.120737 GACCTACACCCACACCCACC 62.121 65.000 0.00 0.00 0.00 4.61
7486 11303 2.431942 CGCGACCTACACCCACAC 60.432 66.667 0.00 0.00 0.00 3.82
7487 11304 3.687102 CCGCGACCTACACCCACA 61.687 66.667 8.23 0.00 0.00 4.17
7507 11324 4.803426 CCTCCTGGCAGTCGTCGC 62.803 72.222 14.43 0.00 0.00 5.19
7508 11325 2.932234 AACCTCCTGGCAGTCGTCG 61.932 63.158 14.43 0.00 36.63 5.12
7509 11326 1.374758 CAACCTCCTGGCAGTCGTC 60.375 63.158 14.43 0.00 36.63 4.20
7510 11327 2.743718 CAACCTCCTGGCAGTCGT 59.256 61.111 14.43 3.11 36.63 4.34
7511 11328 2.743928 GCAACCTCCTGGCAGTCG 60.744 66.667 14.43 3.49 36.63 4.18
7512 11329 2.360475 GGCAACCTCCTGGCAGTC 60.360 66.667 14.43 0.00 41.38 3.51
7513 11330 4.335647 CGGCAACCTCCTGGCAGT 62.336 66.667 14.43 0.00 41.82 4.40
7514 11331 3.551496 TTCGGCAACCTCCTGGCAG 62.551 63.158 7.75 7.75 41.82 4.85
7515 11332 3.551496 CTTCGGCAACCTCCTGGCA 62.551 63.158 0.00 0.00 41.82 4.92
7516 11333 2.747855 CTTCGGCAACCTCCTGGC 60.748 66.667 0.00 0.00 38.47 4.85
7517 11334 2.045926 CCTTCGGCAACCTCCTGG 60.046 66.667 0.00 0.00 39.83 4.45
7529 11346 4.880537 AGATGCTCGGCGCCTTCG 62.881 66.667 26.68 11.98 38.05 3.79
7530 11347 2.964389 GAGATGCTCGGCGCCTTC 60.964 66.667 26.68 13.56 38.05 3.46
7531 11348 4.537433 GGAGATGCTCGGCGCCTT 62.537 66.667 26.68 3.40 38.05 4.35
7535 11352 3.842923 ACCAGGAGATGCTCGGCG 61.843 66.667 0.00 0.00 0.00 6.46
7536 11353 2.202987 CACCAGGAGATGCTCGGC 60.203 66.667 0.00 0.00 0.00 5.54
7537 11354 2.503061 CCACCAGGAGATGCTCGG 59.497 66.667 0.00 0.00 36.89 4.63
7538 11355 2.503061 CCCACCAGGAGATGCTCG 59.497 66.667 0.00 0.00 38.24 5.03
7539 11356 2.750657 CCCCCACCAGGAGATGCTC 61.751 68.421 0.00 0.00 38.24 4.26
7540 11357 2.693864 CCCCCACCAGGAGATGCT 60.694 66.667 0.00 0.00 38.24 3.79
7541 11358 2.276309 CTTCCCCCACCAGGAGATGC 62.276 65.000 0.00 0.00 38.24 3.91
7542 11359 0.621571 TCTTCCCCCACCAGGAGATG 60.622 60.000 0.00 0.00 38.24 2.90
7543 11360 0.121197 TTCTTCCCCCACCAGGAGAT 59.879 55.000 0.00 0.00 38.24 2.75
7544 11361 0.547712 CTTCTTCCCCCACCAGGAGA 60.548 60.000 0.00 0.00 38.24 3.71
7545 11362 0.547712 TCTTCTTCCCCCACCAGGAG 60.548 60.000 0.00 0.00 38.24 3.69
7546 11363 0.104144 TTCTTCTTCCCCCACCAGGA 60.104 55.000 0.00 0.00 38.24 3.86
7547 11364 1.002857 ATTCTTCTTCCCCCACCAGG 58.997 55.000 0.00 0.00 0.00 4.45
7548 11365 2.450476 CAATTCTTCTTCCCCCACCAG 58.550 52.381 0.00 0.00 0.00 4.00
7549 11366 1.077005 CCAATTCTTCTTCCCCCACCA 59.923 52.381 0.00 0.00 0.00 4.17
7550 11367 1.852633 CCAATTCTTCTTCCCCCACC 58.147 55.000 0.00 0.00 0.00 4.61
7551 11368 1.186200 GCCAATTCTTCTTCCCCCAC 58.814 55.000 0.00 0.00 0.00 4.61
7552 11369 1.005924 GAGCCAATTCTTCTTCCCCCA 59.994 52.381 0.00 0.00 0.00 4.96
7553 11370 1.769026 GAGCCAATTCTTCTTCCCCC 58.231 55.000 0.00 0.00 0.00 5.40
7554 11371 1.383523 CGAGCCAATTCTTCTTCCCC 58.616 55.000 0.00 0.00 0.00 4.81
7555 11372 1.383523 CCGAGCCAATTCTTCTTCCC 58.616 55.000 0.00 0.00 0.00 3.97
7556 11373 1.065418 TCCCGAGCCAATTCTTCTTCC 60.065 52.381 0.00 0.00 0.00 3.46
7557 11374 2.284190 CTCCCGAGCCAATTCTTCTTC 58.716 52.381 0.00 0.00 0.00 2.87
7558 11375 1.065126 CCTCCCGAGCCAATTCTTCTT 60.065 52.381 0.00 0.00 0.00 2.52
7559 11376 0.543749 CCTCCCGAGCCAATTCTTCT 59.456 55.000 0.00 0.00 0.00 2.85
7560 11377 0.253327 ACCTCCCGAGCCAATTCTTC 59.747 55.000 0.00 0.00 0.00 2.87
7561 11378 0.253327 GACCTCCCGAGCCAATTCTT 59.747 55.000 0.00 0.00 0.00 2.52
7562 11379 0.909610 TGACCTCCCGAGCCAATTCT 60.910 55.000 0.00 0.00 0.00 2.40
7563 11380 0.035439 TTGACCTCCCGAGCCAATTC 60.035 55.000 0.00 0.00 0.00 2.17
7564 11381 0.322546 GTTGACCTCCCGAGCCAATT 60.323 55.000 0.00 0.00 0.00 2.32
7565 11382 1.299976 GTTGACCTCCCGAGCCAAT 59.700 57.895 0.00 0.00 0.00 3.16
7566 11383 2.747686 GTTGACCTCCCGAGCCAA 59.252 61.111 0.00 0.00 0.00 4.52
7567 11384 3.319198 GGTTGACCTCCCGAGCCA 61.319 66.667 0.00 0.00 0.00 4.75
7568 11385 4.097361 GGGTTGACCTCCCGAGCC 62.097 72.222 0.00 0.00 35.27 4.70
7569 11386 4.097361 GGGGTTGACCTCCCGAGC 62.097 72.222 0.00 0.00 45.46 5.03
7573 11390 2.253403 GATGACGGGGTTGACCTCCC 62.253 65.000 0.00 0.00 43.90 4.30
7574 11391 1.221021 GATGACGGGGTTGACCTCC 59.779 63.158 0.00 0.00 40.03 4.30
7575 11392 1.221021 GGATGACGGGGTTGACCTC 59.779 63.158 0.00 0.00 40.03 3.85
7576 11393 0.914417 ATGGATGACGGGGTTGACCT 60.914 55.000 0.00 0.00 40.03 3.85
7577 11394 0.034477 AATGGATGACGGGGTTGACC 60.034 55.000 0.00 0.00 39.11 4.02
7578 11395 1.834188 AAATGGATGACGGGGTTGAC 58.166 50.000 0.00 0.00 0.00 3.18
7579 11396 2.166829 CAAAATGGATGACGGGGTTGA 58.833 47.619 0.00 0.00 0.00 3.18
7580 11397 1.892474 ACAAAATGGATGACGGGGTTG 59.108 47.619 0.00 0.00 0.00 3.77
7581 11398 1.892474 CACAAAATGGATGACGGGGTT 59.108 47.619 0.00 0.00 0.00 4.11
7582 11399 1.074727 TCACAAAATGGATGACGGGGT 59.925 47.619 0.00 0.00 0.00 4.95
7583 11400 1.472480 GTCACAAAATGGATGACGGGG 59.528 52.381 0.00 0.00 33.94 5.73
7584 11401 2.158559 TGTCACAAAATGGATGACGGG 58.841 47.619 0.00 0.00 44.67 5.28
7585 11402 3.073678 TCTGTCACAAAATGGATGACGG 58.926 45.455 6.16 6.16 46.66 4.79
7586 11403 4.747540 TTCTGTCACAAAATGGATGACG 57.252 40.909 0.00 0.00 44.67 4.35
7587 11404 6.449698 ACAATTCTGTCACAAAATGGATGAC 58.550 36.000 0.00 0.00 42.54 3.06
7588 11405 6.653526 ACAATTCTGTCACAAAATGGATGA 57.346 33.333 0.00 0.00 0.00 2.92
7589 11406 7.009815 GCATACAATTCTGTCACAAAATGGATG 59.990 37.037 7.88 7.88 36.96 3.51
7590 11407 7.037438 GCATACAATTCTGTCACAAAATGGAT 58.963 34.615 0.00 0.00 36.96 3.41
7591 11408 6.389091 GCATACAATTCTGTCACAAAATGGA 58.611 36.000 0.00 0.00 36.96 3.41
7592 11409 5.577945 GGCATACAATTCTGTCACAAAATGG 59.422 40.000 0.00 0.00 36.96 3.16
7593 11410 6.157904 TGGCATACAATTCTGTCACAAAATG 58.842 36.000 0.00 0.00 36.96 2.32
7594 11411 6.343716 TGGCATACAATTCTGTCACAAAAT 57.656 33.333 0.00 0.00 36.96 1.82
7595 11412 5.781210 TGGCATACAATTCTGTCACAAAA 57.219 34.783 0.00 0.00 36.96 2.44
7596 11413 5.771469 CTTGGCATACAATTCTGTCACAAA 58.229 37.500 0.00 0.00 38.65 2.83
7597 11414 5.375417 CTTGGCATACAATTCTGTCACAA 57.625 39.130 0.00 0.00 38.65 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.