Multiple sequence alignment - TraesCS5A01G109200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G109200 chr5A 100.000 5732 0 0 1 5732 197223361 197217630 0.000000e+00 10586.0
1 TraesCS5A01G109200 chr5A 95.935 861 21 7 1 858 611123820 611124669 0.000000e+00 1384.0
2 TraesCS5A01G109200 chr5A 94.664 862 26 9 2 861 656472811 656471968 0.000000e+00 1319.0
3 TraesCS5A01G109200 chr5A 94.179 859 24 7 1 858 482321165 482321998 0.000000e+00 1286.0
4 TraesCS5A01G109200 chr5A 94.179 859 24 9 1 858 482343047 482343880 0.000000e+00 1286.0
5 TraesCS5A01G109200 chr5A 94.063 859 25 9 1 858 482335867 482336700 0.000000e+00 1280.0
6 TraesCS5A01G109200 chr5A 93.946 859 25 10 1 858 482328342 482329174 0.000000e+00 1273.0
7 TraesCS5A01G109200 chr5A 95.600 750 19 4 1 749 640425279 640426015 0.000000e+00 1190.0
8 TraesCS5A01G109200 chr5A 90.000 100 4 5 3479 3573 645994348 645994250 2.170000e-24 124.0
9 TraesCS5A01G109200 chr5A 97.500 40 1 0 4739 4778 402275371 402275332 1.030000e-07 69.4
10 TraesCS5A01G109200 chr5D 94.541 1777 55 19 2982 4741 174011177 174009426 0.000000e+00 2706.0
11 TraesCS5A01G109200 chr5D 96.616 857 28 1 2093 2949 174012033 174011178 0.000000e+00 1421.0
12 TraesCS5A01G109200 chr5D 97.976 741 15 0 1360 2100 174012959 174012219 0.000000e+00 1286.0
13 TraesCS5A01G109200 chr5D 95.253 316 12 2 936 1248 174014428 174014113 1.110000e-136 497.0
14 TraesCS5A01G109200 chr5D 99.145 234 2 0 1112 1345 174014045 174013812 6.870000e-114 422.0
15 TraesCS5A01G109200 chr5D 86.711 301 28 5 1 300 225866200 225865911 1.990000e-84 324.0
16 TraesCS5A01G109200 chr5D 84.762 315 43 2 5423 5732 174009083 174008769 1.550000e-80 311.0
17 TraesCS5A01G109200 chr5D 91.447 152 12 1 5004 5154 174009429 174009278 2.090000e-49 207.0
18 TraesCS5A01G109200 chr5D 96.250 80 2 1 3496 3574 334012302 334012223 4.660000e-26 130.0
19 TraesCS5A01G109200 chr5B 96.545 1100 31 4 2982 4076 184284748 184285845 0.000000e+00 1814.0
20 TraesCS5A01G109200 chr5B 97.668 1029 24 0 1356 2384 184282938 184283966 0.000000e+00 1768.0
21 TraesCS5A01G109200 chr5B 94.819 637 17 5 4121 4743 184285843 184286477 0.000000e+00 979.0
22 TraesCS5A01G109200 chr5B 94.894 568 24 3 2385 2949 184284182 184284747 0.000000e+00 883.0
23 TraesCS5A01G109200 chr5B 98.049 410 6 1 936 1345 184281812 184282219 0.000000e+00 712.0
24 TraesCS5A01G109200 chr5B 90.180 499 40 8 2365 2862 441126750 441127240 4.840000e-180 641.0
25 TraesCS5A01G109200 chr5B 85.687 517 48 14 2365 2862 441067890 441068399 6.580000e-144 521.0
26 TraesCS5A01G109200 chr5B 91.503 153 12 1 5000 5151 184288062 184288214 5.820000e-50 209.0
27 TraesCS5A01G109200 chr5B 85.185 189 23 2 5549 5732 184288592 184288780 7.580000e-44 189.0
28 TraesCS5A01G109200 chr5B 95.122 41 2 0 4738 4778 26842389 26842349 1.330000e-06 65.8
29 TraesCS5A01G109200 chr2A 98.137 859 11 3 1 858 598968764 598967910 0.000000e+00 1493.0
30 TraesCS5A01G109200 chr2A 85.375 253 28 6 4762 5008 400919701 400919452 2.650000e-63 254.0
31 TraesCS5A01G109200 chr2A 85.375 253 28 6 4762 5008 402859815 402859566 2.650000e-63 254.0
32 TraesCS5A01G109200 chr2A 83.750 160 19 6 4856 5011 203459951 203460107 1.660000e-30 145.0
33 TraesCS5A01G109200 chr2A 96.386 83 1 2 3494 3574 483604662 483604580 1.000000e-27 135.0
34 TraesCS5A01G109200 chr2A 95.349 43 1 1 4734 4775 673223901 673223859 3.710000e-07 67.6
35 TraesCS5A01G109200 chr3A 97.680 862 19 1 1 861 575335762 575334901 0.000000e+00 1480.0
36 TraesCS5A01G109200 chr3A 96.857 859 25 2 1 858 433832161 433831304 0.000000e+00 1435.0
37 TraesCS5A01G109200 chr3A 96.857 859 16 2 1 858 519222503 519221655 0.000000e+00 1426.0
38 TraesCS5A01G109200 chr3A 97.500 40 1 0 4739 4778 69262542 69262581 1.030000e-07 69.4
39 TraesCS5A01G109200 chr3A 97.500 40 1 0 4736 4775 325451194 325451233 1.030000e-07 69.4
40 TraesCS5A01G109200 chr3A 97.436 39 1 0 4737 4775 524165419 524165457 3.710000e-07 67.6
41 TraesCS5A01G109200 chr1A 96.748 861 15 3 1 858 265027748 265028598 0.000000e+00 1423.0
42 TraesCS5A01G109200 chr1A 95.476 862 25 5 1 861 108757222 108756374 0.000000e+00 1363.0
43 TraesCS5A01G109200 chr1A 95.122 41 2 0 4738 4778 108155102 108155062 1.330000e-06 65.8
44 TraesCS5A01G109200 chr4A 96.391 859 18 4 1 858 517316433 517315587 0.000000e+00 1402.0
45 TraesCS5A01G109200 chr4A 95.354 861 27 4 1 858 276191065 276191915 0.000000e+00 1356.0
46 TraesCS5A01G109200 chr7A 95.602 864 21 7 1 858 83019973 83020825 0.000000e+00 1369.0
47 TraesCS5A01G109200 chr7A 88.285 239 23 2 4775 5008 732467050 732467288 1.220000e-71 281.0
48 TraesCS5A01G109200 chr7A 87.917 240 23 3 4775 5008 175240767 175240528 1.570000e-70 278.0
49 TraesCS5A01G109200 chr7A 82.917 240 32 6 4775 5008 217773682 217773918 2.090000e-49 207.0
50 TraesCS5A01G109200 chr7A 82.587 201 33 2 4808 5007 33804518 33804319 5.900000e-40 176.0
51 TraesCS5A01G109200 chr7A 88.350 103 8 4 3500 3598 96556132 96556234 2.810000e-23 121.0
52 TraesCS5A01G109200 chr7A 95.238 42 2 0 4737 4778 729828021 729827980 3.710000e-07 67.6
53 TraesCS5A01G109200 chr3D 85.138 545 47 9 348 858 34816087 34816631 1.410000e-145 527.0
54 TraesCS5A01G109200 chr3D 84.954 545 48 9 348 858 34857058 34857602 6.580000e-144 521.0
55 TraesCS5A01G109200 chr3D 84.954 545 48 9 348 858 34901333 34901877 6.580000e-144 521.0
56 TraesCS5A01G109200 chr3D 88.333 300 22 4 1 300 34699971 34700257 1.180000e-91 348.0
57 TraesCS5A01G109200 chr3D 89.157 83 8 1 212 293 327569289 327569207 1.020000e-17 102.0
58 TraesCS5A01G109200 chr2D 84.646 254 28 8 4762 5009 170783053 170783301 5.740000e-60 243.0
59 TraesCS5A01G109200 chr2D 84.774 243 30 5 4762 4999 393583148 393583388 2.670000e-58 237.0
60 TraesCS5A01G109200 chr2D 83.922 255 30 7 4762 5008 576885704 576885453 3.450000e-57 233.0
61 TraesCS5A01G109200 chr2D 91.667 96 5 3 3480 3573 619480896 619480802 4.660000e-26 130.0
62 TraesCS5A01G109200 chr7B 84.774 243 28 5 4762 4999 219372670 219372908 9.600000e-58 235.0
63 TraesCS5A01G109200 chr7B 78.545 275 25 11 4249 4508 523797134 523797389 3.580000e-32 150.0
64 TraesCS5A01G109200 chr6A 84.711 242 29 5 4775 5009 421333600 421333840 9.600000e-58 235.0
65 TraesCS5A01G109200 chr6A 77.586 116 23 3 5513 5626 448362418 448362532 3.710000e-07 67.6
66 TraesCS5A01G109200 chrUn 95.098 102 4 1 5632 5732 239345582 239345683 5.940000e-35 159.0
67 TraesCS5A01G109200 chrUn 94.118 102 5 1 5632 5732 93410948 93411049 2.770000e-33 154.0
68 TraesCS5A01G109200 chrUn 94.118 102 5 1 5632 5732 216520446 216520345 2.770000e-33 154.0
69 TraesCS5A01G109200 chrUn 94.118 102 5 1 5632 5732 396206678 396206779 2.770000e-33 154.0
70 TraesCS5A01G109200 chr3B 95.098 102 4 1 5632 5732 201525706 201525605 5.940000e-35 159.0
71 TraesCS5A01G109200 chr3B 97.531 81 0 2 3496 3574 53239894 53239814 2.790000e-28 137.0
72 TraesCS5A01G109200 chr6D 94.118 102 5 1 5632 5732 168253082 168253183 2.770000e-33 154.0
73 TraesCS5A01G109200 chr6D 94.118 102 5 1 5632 5732 168253608 168253507 2.770000e-33 154.0
74 TraesCS5A01G109200 chr1B 90.909 99 4 5 3480 3574 640474602 640474699 1.680000e-25 128.0
75 TraesCS5A01G109200 chr4D 92.405 79 6 0 860 938 336247608 336247530 4.690000e-21 113.0
76 TraesCS5A01G109200 chr7D 87.778 90 11 0 5520 5609 51784329 51784240 7.850000e-19 106.0
77 TraesCS5A01G109200 chr7D 89.873 79 8 0 860 938 270597987 270597909 1.020000e-17 102.0
78 TraesCS5A01G109200 chr4B 75.904 166 32 8 701 862 140053857 140053696 1.710000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G109200 chr5A 197217630 197223361 5731 True 10586.000000 10586 100.000000 1 5732 1 chr5A.!!$R1 5731
1 TraesCS5A01G109200 chr5A 611123820 611124669 849 False 1384.000000 1384 95.935000 1 858 1 chr5A.!!$F5 857
2 TraesCS5A01G109200 chr5A 656471968 656472811 843 True 1319.000000 1319 94.664000 2 861 1 chr5A.!!$R4 859
3 TraesCS5A01G109200 chr5A 482321165 482321998 833 False 1286.000000 1286 94.179000 1 858 1 chr5A.!!$F1 857
4 TraesCS5A01G109200 chr5A 482343047 482343880 833 False 1286.000000 1286 94.179000 1 858 1 chr5A.!!$F4 857
5 TraesCS5A01G109200 chr5A 482335867 482336700 833 False 1280.000000 1280 94.063000 1 858 1 chr5A.!!$F3 857
6 TraesCS5A01G109200 chr5A 482328342 482329174 832 False 1273.000000 1273 93.946000 1 858 1 chr5A.!!$F2 857
7 TraesCS5A01G109200 chr5A 640425279 640426015 736 False 1190.000000 1190 95.600000 1 749 1 chr5A.!!$F6 748
8 TraesCS5A01G109200 chr5D 174008769 174014428 5659 True 978.571429 2706 94.248571 936 5732 7 chr5D.!!$R3 4796
9 TraesCS5A01G109200 chr5B 184281812 184288780 6968 False 936.285714 1814 94.094714 936 5732 7 chr5B.!!$F3 4796
10 TraesCS5A01G109200 chr5B 441067890 441068399 509 False 521.000000 521 85.687000 2365 2862 1 chr5B.!!$F1 497
11 TraesCS5A01G109200 chr2A 598967910 598968764 854 True 1493.000000 1493 98.137000 1 858 1 chr2A.!!$R4 857
12 TraesCS5A01G109200 chr3A 575334901 575335762 861 True 1480.000000 1480 97.680000 1 861 1 chr3A.!!$R3 860
13 TraesCS5A01G109200 chr3A 433831304 433832161 857 True 1435.000000 1435 96.857000 1 858 1 chr3A.!!$R1 857
14 TraesCS5A01G109200 chr3A 519221655 519222503 848 True 1426.000000 1426 96.857000 1 858 1 chr3A.!!$R2 857
15 TraesCS5A01G109200 chr1A 265027748 265028598 850 False 1423.000000 1423 96.748000 1 858 1 chr1A.!!$F1 857
16 TraesCS5A01G109200 chr1A 108756374 108757222 848 True 1363.000000 1363 95.476000 1 861 1 chr1A.!!$R2 860
17 TraesCS5A01G109200 chr4A 517315587 517316433 846 True 1402.000000 1402 96.391000 1 858 1 chr4A.!!$R1 857
18 TraesCS5A01G109200 chr4A 276191065 276191915 850 False 1356.000000 1356 95.354000 1 858 1 chr4A.!!$F1 857
19 TraesCS5A01G109200 chr7A 83019973 83020825 852 False 1369.000000 1369 95.602000 1 858 1 chr7A.!!$F1 857
20 TraesCS5A01G109200 chr3D 34816087 34816631 544 False 527.000000 527 85.138000 348 858 1 chr3D.!!$F2 510
21 TraesCS5A01G109200 chr3D 34857058 34857602 544 False 521.000000 521 84.954000 348 858 1 chr3D.!!$F3 510
22 TraesCS5A01G109200 chr3D 34901333 34901877 544 False 521.000000 521 84.954000 348 858 1 chr3D.!!$F4 510

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
905 963 0.110147 TTAAATTGGCCAACGCGACG 60.110 50.000 23.27 2.08 35.02 5.12 F
1349 1616 0.395312 TCCGACAAACTGAAGGTCCC 59.605 55.000 0.00 0.00 0.00 4.46 F
1350 1617 0.396811 CCGACAAACTGAAGGTCCCT 59.603 55.000 0.00 0.00 0.00 4.20 F
1899 3019 1.345089 ACAATTGCAATGCTCAGCCAA 59.655 42.857 13.82 0.00 0.00 4.52 F
2483 4011 1.349026 ACATGAACAGTAGCCAGCAGT 59.651 47.619 0.00 0.00 0.00 4.40 F
3067 4617 2.357637 TGGCAACTTGTCTGTTAAGTGC 59.642 45.455 0.00 0.00 38.32 4.40 F
4288 5846 3.291584 TGAGACATCGGCAAGAGACTAT 58.708 45.455 0.00 0.00 0.00 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2692 4242 0.327191 AGTATGGAACCGGTGGGGAT 60.327 55.000 8.52 0.31 39.97 3.85 R
3040 4590 2.653726 ACAGACAAGTTGCCACATTGA 58.346 42.857 1.81 0.00 0.00 2.57 R
3067 4617 9.467258 AACATAACAGACAAACATGAGAAATTG 57.533 29.630 0.00 0.00 0.00 2.32 R
3609 5164 0.872388 CGGCAACACCCTAACAAGTC 59.128 55.000 0.00 0.00 33.26 3.01 R
4288 5846 1.287146 GTGAGGTACTGGGGAGGAGTA 59.713 57.143 0.00 0.00 41.55 2.59 R
4524 6098 0.827089 TCCAGAACAACGGTCGGGTA 60.827 55.000 0.00 0.00 0.00 3.69 R
5338 8314 0.032403 TCCTAAACCACACACGTCCG 59.968 55.000 0.00 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 71 1.969589 CCAACCCCCACAAGTACGC 60.970 63.158 0.00 0.00 0.00 4.42
61 72 1.228003 CAACCCCCACAAGTACGCA 60.228 57.895 0.00 0.00 0.00 5.24
62 73 1.228033 AACCCCCACAAGTACGCAC 60.228 57.895 0.00 0.00 0.00 5.34
63 74 1.985460 AACCCCCACAAGTACGCACA 61.985 55.000 0.00 0.00 0.00 4.57
64 75 1.228003 CCCCCACAAGTACGCACAA 60.228 57.895 0.00 0.00 0.00 3.33
65 76 1.234615 CCCCCACAAGTACGCACAAG 61.235 60.000 0.00 0.00 0.00 3.16
66 77 0.534203 CCCCACAAGTACGCACAAGT 60.534 55.000 0.00 0.00 0.00 3.16
67 78 1.270412 CCCCACAAGTACGCACAAGTA 60.270 52.381 0.00 0.00 0.00 2.24
68 79 1.796459 CCCACAAGTACGCACAAGTAC 59.204 52.381 0.00 0.00 45.31 2.73
125 140 4.887655 GCAGCCACCACCTACTATTATTTT 59.112 41.667 0.00 0.00 0.00 1.82
132 147 7.123383 CACCACCTACTATTATTTTCCCCTTT 58.877 38.462 0.00 0.00 0.00 3.11
406 424 5.791666 TGATTGTTGCATAAGAAATGCCAA 58.208 33.333 7.46 5.96 43.94 4.52
436 455 2.087646 GGGACATGAACTTGGCTCTTC 58.912 52.381 0.00 0.00 0.00 2.87
704 759 7.226325 GCTATTCTGTCTGCATTTACTCTTCAT 59.774 37.037 0.00 0.00 0.00 2.57
858 916 0.179119 ACGCACGGGCATCTTACTAC 60.179 55.000 11.77 0.00 41.24 2.73
861 919 2.030185 CGCACGGGCATCTTACTACTAT 60.030 50.000 11.77 0.00 41.24 2.12
862 920 3.552273 CGCACGGGCATCTTACTACTATT 60.552 47.826 11.77 0.00 41.24 1.73
863 921 4.377897 GCACGGGCATCTTACTACTATTT 58.622 43.478 3.77 0.00 40.72 1.40
864 922 4.448060 GCACGGGCATCTTACTACTATTTC 59.552 45.833 3.77 0.00 40.72 2.17
865 923 5.739358 GCACGGGCATCTTACTACTATTTCT 60.739 44.000 3.77 0.00 40.72 2.52
866 924 5.692204 CACGGGCATCTTACTACTATTTCTG 59.308 44.000 0.00 0.00 0.00 3.02
867 925 5.597182 ACGGGCATCTTACTACTATTTCTGA 59.403 40.000 0.00 0.00 0.00 3.27
868 926 6.267928 ACGGGCATCTTACTACTATTTCTGAT 59.732 38.462 0.00 0.00 0.00 2.90
869 927 7.450634 ACGGGCATCTTACTACTATTTCTGATA 59.549 37.037 0.00 0.00 0.00 2.15
870 928 8.470805 CGGGCATCTTACTACTATTTCTGATAT 58.529 37.037 0.00 0.00 0.00 1.63
883 941 9.751542 ACTATTTCTGATATTTGTAAGTCGGAG 57.248 33.333 0.00 0.00 0.00 4.63
884 942 9.197694 CTATTTCTGATATTTGTAAGTCGGAGG 57.802 37.037 0.00 0.00 0.00 4.30
885 943 6.785337 TTCTGATATTTGTAAGTCGGAGGA 57.215 37.500 0.00 0.00 0.00 3.71
886 944 6.978674 TCTGATATTTGTAAGTCGGAGGAT 57.021 37.500 0.00 0.00 0.00 3.24
887 945 7.361457 TCTGATATTTGTAAGTCGGAGGATT 57.639 36.000 0.00 0.00 0.00 3.01
888 946 8.473358 TCTGATATTTGTAAGTCGGAGGATTA 57.527 34.615 0.00 0.00 0.00 1.75
889 947 8.920174 TCTGATATTTGTAAGTCGGAGGATTAA 58.080 33.333 0.00 0.00 0.00 1.40
890 948 9.542462 CTGATATTTGTAAGTCGGAGGATTAAA 57.458 33.333 0.00 0.00 0.00 1.52
894 952 6.995511 TTGTAAGTCGGAGGATTAAATTGG 57.004 37.500 0.00 0.00 0.00 3.16
895 953 4.879545 TGTAAGTCGGAGGATTAAATTGGC 59.120 41.667 0.00 0.00 0.00 4.52
896 954 2.932261 AGTCGGAGGATTAAATTGGCC 58.068 47.619 0.00 0.00 0.00 5.36
897 955 2.241176 AGTCGGAGGATTAAATTGGCCA 59.759 45.455 0.00 0.00 0.00 5.36
898 956 3.020984 GTCGGAGGATTAAATTGGCCAA 58.979 45.455 23.00 23.00 0.00 4.52
899 957 3.020984 TCGGAGGATTAAATTGGCCAAC 58.979 45.455 23.27 6.65 0.00 3.77
900 958 2.223479 CGGAGGATTAAATTGGCCAACG 60.223 50.000 23.27 11.93 0.00 4.10
901 959 2.481276 GGAGGATTAAATTGGCCAACGC 60.481 50.000 23.27 7.79 0.00 4.84
902 960 1.134175 AGGATTAAATTGGCCAACGCG 59.866 47.619 23.27 3.53 35.02 6.01
903 961 1.133407 GGATTAAATTGGCCAACGCGA 59.867 47.619 23.27 8.17 35.02 5.87
904 962 2.182014 GATTAAATTGGCCAACGCGAC 58.818 47.619 23.27 7.46 35.02 5.19
905 963 0.110147 TTAAATTGGCCAACGCGACG 60.110 50.000 23.27 2.08 35.02 5.12
906 964 0.949588 TAAATTGGCCAACGCGACGA 60.950 50.000 23.27 0.00 35.02 4.20
907 965 2.182614 AAATTGGCCAACGCGACGAG 62.183 55.000 23.27 0.00 35.02 4.18
908 966 3.876589 ATTGGCCAACGCGACGAGT 62.877 57.895 23.27 0.00 35.02 4.18
909 967 2.495366 ATTGGCCAACGCGACGAGTA 62.495 55.000 23.27 0.00 35.02 2.59
910 968 2.879462 GGCCAACGCGACGAGTAG 60.879 66.667 15.93 0.88 35.02 2.57
911 969 2.879462 GCCAACGCGACGAGTAGG 60.879 66.667 15.93 4.44 0.00 3.18
912 970 2.872557 CCAACGCGACGAGTAGGA 59.127 61.111 15.93 0.00 0.00 2.94
913 971 1.226323 CCAACGCGACGAGTAGGAG 60.226 63.158 15.93 0.00 0.00 3.69
914 972 1.226323 CAACGCGACGAGTAGGAGG 60.226 63.158 15.93 0.00 0.00 4.30
915 973 1.376424 AACGCGACGAGTAGGAGGA 60.376 57.895 15.93 0.00 0.00 3.71
916 974 1.642952 AACGCGACGAGTAGGAGGAC 61.643 60.000 15.93 0.00 0.00 3.85
917 975 2.821688 CGCGACGAGTAGGAGGACC 61.822 68.421 0.00 0.00 0.00 4.46
919 977 1.031029 GCGACGAGTAGGAGGACCTT 61.031 60.000 0.00 0.00 45.36 3.50
920 978 1.015868 CGACGAGTAGGAGGACCTTC 58.984 60.000 0.00 0.00 45.36 3.46
921 979 1.678123 CGACGAGTAGGAGGACCTTCA 60.678 57.143 1.60 0.00 45.36 3.02
922 980 2.018515 GACGAGTAGGAGGACCTTCAG 58.981 57.143 1.60 0.00 45.36 3.02
923 981 1.355043 ACGAGTAGGAGGACCTTCAGT 59.645 52.381 1.60 0.00 45.36 3.41
924 982 1.746220 CGAGTAGGAGGACCTTCAGTG 59.254 57.143 1.60 0.00 45.36 3.66
925 983 2.618302 CGAGTAGGAGGACCTTCAGTGA 60.618 54.545 1.60 0.00 45.36 3.41
926 984 3.432378 GAGTAGGAGGACCTTCAGTGAA 58.568 50.000 5.25 5.25 45.36 3.18
927 985 4.027437 GAGTAGGAGGACCTTCAGTGAAT 58.973 47.826 5.91 0.00 45.36 2.57
928 986 4.430441 AGTAGGAGGACCTTCAGTGAATT 58.570 43.478 5.91 0.00 45.36 2.17
929 987 4.846940 AGTAGGAGGACCTTCAGTGAATTT 59.153 41.667 5.91 0.00 45.36 1.82
930 988 4.731313 AGGAGGACCTTCAGTGAATTTT 57.269 40.909 5.91 0.00 45.36 1.82
931 989 5.066913 AGGAGGACCTTCAGTGAATTTTT 57.933 39.130 5.91 0.00 45.36 1.94
932 990 5.073428 AGGAGGACCTTCAGTGAATTTTTC 58.927 41.667 5.91 0.85 45.36 2.29
933 991 5.073428 GGAGGACCTTCAGTGAATTTTTCT 58.927 41.667 5.91 0.00 0.00 2.52
934 992 5.182190 GGAGGACCTTCAGTGAATTTTTCTC 59.818 44.000 5.91 7.07 0.00 2.87
969 1027 1.051812 CACTTCTCCCTGACCAGTGT 58.948 55.000 0.00 0.00 31.97 3.55
970 1028 1.051812 ACTTCTCCCTGACCAGTGTG 58.948 55.000 0.00 0.00 0.00 3.82
1086 1149 2.183300 GAGCACCATGCCGTCGTA 59.817 61.111 0.00 0.00 46.52 3.43
1338 1605 2.494059 CTCAAGAAGGCTTCCGACAAA 58.506 47.619 23.09 3.31 30.14 2.83
1341 1608 1.884235 AGAAGGCTTCCGACAAACTG 58.116 50.000 23.09 0.00 0.00 3.16
1345 1612 0.875059 GGCTTCCGACAAACTGAAGG 59.125 55.000 0.00 0.00 39.24 3.46
1346 1613 1.594331 GCTTCCGACAAACTGAAGGT 58.406 50.000 0.00 0.00 39.24 3.50
1347 1614 1.531578 GCTTCCGACAAACTGAAGGTC 59.468 52.381 0.00 0.00 39.24 3.85
1348 1615 2.143925 CTTCCGACAAACTGAAGGTCC 58.856 52.381 0.00 0.00 36.60 4.46
1349 1616 0.395312 TCCGACAAACTGAAGGTCCC 59.605 55.000 0.00 0.00 0.00 4.46
1350 1617 0.396811 CCGACAAACTGAAGGTCCCT 59.603 55.000 0.00 0.00 0.00 4.20
1351 1618 1.621814 CCGACAAACTGAAGGTCCCTA 59.378 52.381 0.00 0.00 0.00 3.53
1352 1619 2.038033 CCGACAAACTGAAGGTCCCTAA 59.962 50.000 0.00 0.00 0.00 2.69
1353 1620 3.495453 CCGACAAACTGAAGGTCCCTAAA 60.495 47.826 0.00 0.00 0.00 1.85
1354 1621 4.131596 CGACAAACTGAAGGTCCCTAAAA 58.868 43.478 0.00 0.00 0.00 1.52
1466 2586 4.226761 GCTTGTAGTGGCATGTACAAAAC 58.773 43.478 19.72 13.83 38.38 2.43
1519 2639 9.575868 TTAGGGTTTGAATTATGTTCACAAGTA 57.424 29.630 0.00 0.00 0.00 2.24
1899 3019 1.345089 ACAATTGCAATGCTCAGCCAA 59.655 42.857 13.82 0.00 0.00 4.52
2028 3148 5.428253 TGCACAGGTATTTTGATCTAGTCC 58.572 41.667 0.00 0.00 0.00 3.85
2086 3206 5.370584 TGTATTCTCCATTCAGGGTCATCAT 59.629 40.000 0.00 0.00 38.24 2.45
2297 3610 2.548057 TCGTGTACGAAAAGTAGACCGT 59.452 45.455 4.41 0.00 44.12 4.83
2299 3612 4.084507 CGTGTACGAAAAGTAGACCGTAG 58.915 47.826 0.00 0.00 44.12 3.51
2421 3949 6.753913 TGAATCTAGAGCATCAACCCTAAT 57.246 37.500 0.00 0.00 37.82 1.73
2483 4011 1.349026 ACATGAACAGTAGCCAGCAGT 59.651 47.619 0.00 0.00 0.00 4.40
2537 4068 4.022329 CACCCTTGTCATAAAAAGGTCCAC 60.022 45.833 0.00 0.00 41.25 4.02
2539 4070 4.069304 CCTTGTCATAAAAAGGTCCACGA 58.931 43.478 0.00 0.00 38.53 4.35
2602 4152 4.339814 AGCGGGTTTGAGATAGTCTAGAAG 59.660 45.833 0.00 0.00 0.00 2.85
2782 4332 2.559698 TCATTTCTGCGTTTCCTCCA 57.440 45.000 0.00 0.00 0.00 3.86
2939 4489 4.538746 TGTCGTGTTGAATGGGTACATA 57.461 40.909 0.00 0.00 35.94 2.29
2949 4499 6.514012 TGAATGGGTACATATTGAGTGGAT 57.486 37.500 0.00 0.00 35.94 3.41
2950 4500 6.298361 TGAATGGGTACATATTGAGTGGATG 58.702 40.000 0.00 0.00 35.94 3.51
2951 4501 5.912149 ATGGGTACATATTGAGTGGATGT 57.088 39.130 0.00 0.00 34.99 3.06
2952 4502 7.071824 TGAATGGGTACATATTGAGTGGATGTA 59.928 37.037 0.00 0.00 35.94 2.29
2953 4503 7.574021 ATGGGTACATATTGAGTGGATGTAT 57.426 36.000 0.00 0.00 38.11 2.29
2954 4504 6.768483 TGGGTACATATTGAGTGGATGTATG 58.232 40.000 0.00 0.00 38.11 2.39
2955 4505 5.643777 GGGTACATATTGAGTGGATGTATGC 59.356 44.000 0.00 0.00 38.11 3.14
2956 4506 6.467677 GGTACATATTGAGTGGATGTATGCT 58.532 40.000 0.00 0.00 38.11 3.79
2957 4507 6.591834 GGTACATATTGAGTGGATGTATGCTC 59.408 42.308 0.00 0.00 38.11 4.26
2958 4508 6.430962 ACATATTGAGTGGATGTATGCTCT 57.569 37.500 0.00 0.00 32.07 4.09
2959 4509 7.544804 ACATATTGAGTGGATGTATGCTCTA 57.455 36.000 0.00 0.00 32.07 2.43
2960 4510 7.966812 ACATATTGAGTGGATGTATGCTCTAA 58.033 34.615 0.00 0.00 32.07 2.10
2961 4511 8.093307 ACATATTGAGTGGATGTATGCTCTAAG 58.907 37.037 0.00 0.00 32.07 2.18
2962 4512 5.939764 TTGAGTGGATGTATGCTCTAAGT 57.060 39.130 0.00 0.00 0.00 2.24
2963 4513 5.268118 TGAGTGGATGTATGCTCTAAGTG 57.732 43.478 0.00 0.00 0.00 3.16
2964 4514 4.054671 GAGTGGATGTATGCTCTAAGTGC 58.945 47.826 0.00 0.00 0.00 4.40
2965 4515 3.708631 AGTGGATGTATGCTCTAAGTGCT 59.291 43.478 0.00 0.00 0.00 4.40
2966 4516 4.895889 AGTGGATGTATGCTCTAAGTGCTA 59.104 41.667 0.00 0.00 0.00 3.49
2967 4517 5.363868 AGTGGATGTATGCTCTAAGTGCTAA 59.636 40.000 0.00 0.00 0.00 3.09
2968 4518 5.463724 GTGGATGTATGCTCTAAGTGCTAAC 59.536 44.000 0.00 0.00 0.00 2.34
2969 4519 5.128663 TGGATGTATGCTCTAAGTGCTAACA 59.871 40.000 0.00 0.00 33.17 2.41
2985 4535 5.976534 GTGCTAACACTACATCATCTGAGAG 59.023 44.000 0.00 0.00 43.85 3.20
3040 4590 6.211584 ACCTCATGGCTAGTAATCACGATAAT 59.788 38.462 0.00 0.00 36.63 1.28
3067 4617 2.357637 TGGCAACTTGTCTGTTAAGTGC 59.642 45.455 0.00 0.00 38.32 4.40
3609 5164 5.128499 ACCTCTATTTGACATGGAGACTCAG 59.872 44.000 4.53 0.00 0.00 3.35
3706 5261 6.441093 TCCATAATGTGAGAGCAATTTGAC 57.559 37.500 0.00 0.00 0.00 3.18
3718 5273 6.182627 AGAGCAATTTGACATGGAAGTATCA 58.817 36.000 0.00 0.00 0.00 2.15
3741 5296 5.682943 TTTCAAACTTCCACTGTTATCCG 57.317 39.130 0.00 0.00 0.00 4.18
3792 5347 5.738619 TTGTCTTAGTATTCTGCACTCCA 57.261 39.130 0.00 0.00 0.00 3.86
3793 5348 5.330455 TGTCTTAGTATTCTGCACTCCAG 57.670 43.478 0.00 0.00 43.17 3.86
3816 5371 5.125578 AGAGATCTACACGTCATAACTTGCA 59.874 40.000 0.00 0.00 0.00 4.08
3856 5411 8.308931 ACAAATCATTCATCACTTTACTGCATT 58.691 29.630 0.00 0.00 0.00 3.56
3898 5453 3.627732 ATCTCGCAGTAGGTATTCACG 57.372 47.619 0.00 0.00 0.00 4.35
3909 5464 8.114905 GCAGTAGGTATTCACGAAAGTTTATTC 58.885 37.037 0.00 0.00 46.40 1.75
3937 5492 5.554822 AAACTGTCGCAACTTAAGTTCAA 57.445 34.783 18.00 4.02 35.83 2.69
4108 5663 7.066163 TCCATGACTGTTTTTGTCTATAGCATG 59.934 37.037 0.00 0.00 35.63 4.06
4109 5664 7.066163 CCATGACTGTTTTTGTCTATAGCATGA 59.934 37.037 0.00 0.00 35.63 3.07
4120 5678 5.047802 TGTCTATAGCATGATGATCGCTTGA 60.048 40.000 0.00 0.00 37.20 3.02
4288 5846 3.291584 TGAGACATCGGCAAGAGACTAT 58.708 45.455 0.00 0.00 0.00 2.12
4447 6016 3.833070 GAGGTTTTCCCTGTCTCTCACTA 59.167 47.826 0.00 0.00 46.51 2.74
4524 6098 5.463051 AGGTGAGAGGATGATCCATTTTT 57.537 39.130 14.90 0.00 39.61 1.94
4531 6105 4.461198 AGGATGATCCATTTTTACCCGAC 58.539 43.478 14.90 0.00 39.61 4.79
4547 6121 0.031585 CGACCGTTGTTCTGGAGTCA 59.968 55.000 0.00 0.00 0.00 3.41
4626 6200 4.618489 GGATTCGAATGAGTGCAAAGTTTG 59.382 41.667 16.96 11.41 0.00 2.93
4648 6222 2.137523 CTTTCCTTGTGGCATTTGTGC 58.862 47.619 0.00 0.00 0.00 4.57
4662 6236 6.071447 TGGCATTTGTGCATTTACAGAATACT 60.071 34.615 2.61 0.00 36.33 2.12
4665 6239 7.253420 GCATTTGTGCATTTACAGAATACTTCG 60.253 37.037 0.00 0.00 34.41 3.79
4710 6284 4.929211 CCGTTGGATCGATTGCTAATGATA 59.071 41.667 0.00 0.00 0.00 2.15
4713 6287 6.366061 CGTTGGATCGATTGCTAATGATAGAA 59.634 38.462 0.00 0.00 0.00 2.10
4743 6317 1.639298 CCGTCTTGCAGTGCTAAGGC 61.639 60.000 17.60 17.17 39.26 4.35
4745 6319 0.322008 GTCTTGCAGTGCTAAGGCCT 60.322 55.000 17.60 0.00 37.74 5.19
4747 6321 0.807496 CTTGCAGTGCTAAGGCCTTC 59.193 55.000 24.49 9.55 37.74 3.46
4749 6323 0.401738 TGCAGTGCTAAGGCCTTCTT 59.598 50.000 24.49 0.00 39.40 2.52
4750 6324 1.202927 TGCAGTGCTAAGGCCTTCTTT 60.203 47.619 24.49 0.00 36.93 2.52
4751 6325 1.200948 GCAGTGCTAAGGCCTTCTTTG 59.799 52.381 24.49 15.08 36.93 2.77
4752 6326 1.815003 CAGTGCTAAGGCCTTCTTTGG 59.185 52.381 24.49 9.42 36.93 3.28
4754 6328 2.158460 AGTGCTAAGGCCTTCTTTGGTT 60.158 45.455 24.49 0.00 36.93 3.67
4755 6329 2.229062 GTGCTAAGGCCTTCTTTGGTTC 59.771 50.000 24.49 3.94 36.93 3.62
4756 6330 2.158534 TGCTAAGGCCTTCTTTGGTTCA 60.159 45.455 24.49 6.55 36.93 3.18
4758 6332 4.263727 TGCTAAGGCCTTCTTTGGTTCATA 60.264 41.667 24.49 0.00 36.93 2.15
4759 6333 4.336713 GCTAAGGCCTTCTTTGGTTCATAG 59.663 45.833 24.49 10.26 36.93 2.23
4762 6336 3.529319 AGGCCTTCTTTGGTTCATAGGAT 59.471 43.478 0.00 0.00 0.00 3.24
4763 6337 4.726825 AGGCCTTCTTTGGTTCATAGGATA 59.273 41.667 0.00 0.00 0.00 2.59
4765 6339 5.066593 GCCTTCTTTGGTTCATAGGATAGG 58.933 45.833 0.00 0.00 0.00 2.57
4766 6340 5.163195 GCCTTCTTTGGTTCATAGGATAGGA 60.163 44.000 0.00 0.00 0.00 2.94
4767 6341 6.634955 GCCTTCTTTGGTTCATAGGATAGGAA 60.635 42.308 0.00 0.00 39.27 3.36
4769 6343 8.001292 CCTTCTTTGGTTCATAGGATAGGAATT 58.999 37.037 0.00 0.00 43.72 2.17
4770 6344 9.413734 CTTCTTTGGTTCATAGGATAGGAATTT 57.586 33.333 0.00 0.00 43.72 1.82
4771 6345 8.980481 TCTTTGGTTCATAGGATAGGAATTTC 57.020 34.615 0.00 0.00 43.72 2.17
4772 6346 8.556589 TCTTTGGTTCATAGGATAGGAATTTCA 58.443 33.333 0.00 0.00 43.72 2.69
4776 6350 9.964354 TGGTTCATAGGATAGGAATTTCATATG 57.036 33.333 8.22 0.00 43.72 1.78
4782 6356 7.934855 AGGATAGGAATTTCATATGACATGC 57.065 36.000 4.48 2.83 0.00 4.06
4783 6357 7.464273 AGGATAGGAATTTCATATGACATGCA 58.536 34.615 11.24 0.00 0.00 3.96
4784 6358 8.114102 AGGATAGGAATTTCATATGACATGCAT 58.886 33.333 11.24 7.12 41.08 3.96
4785 6359 8.404000 GGATAGGAATTTCATATGACATGCATC 58.596 37.037 11.24 6.82 38.44 3.91
4787 6361 7.450124 AGGAATTTCATATGACATGCATCTC 57.550 36.000 11.24 0.00 38.44 2.75
4788 6362 7.002276 AGGAATTTCATATGACATGCATCTCA 58.998 34.615 7.13 7.13 38.44 3.27
4790 6364 8.304596 GGAATTTCATATGACATGCATCTCAAT 58.695 33.333 8.81 2.07 38.44 2.57
4791 6365 9.692749 GAATTTCATATGACATGCATCTCAATT 57.307 29.630 8.81 4.80 38.44 2.32
4793 6367 6.812879 TCATATGACATGCATCTCAATTCC 57.187 37.500 8.81 0.00 38.44 3.01
4794 6368 6.540083 TCATATGACATGCATCTCAATTCCT 58.460 36.000 8.81 0.00 38.44 3.36
4795 6369 7.682628 TCATATGACATGCATCTCAATTCCTA 58.317 34.615 8.81 0.00 38.44 2.94
4796 6370 8.326529 TCATATGACATGCATCTCAATTCCTAT 58.673 33.333 8.81 0.00 38.44 2.57
4797 6371 9.609346 CATATGACATGCATCTCAATTCCTATA 57.391 33.333 8.81 0.00 38.44 1.31
4798 6372 9.833917 ATATGACATGCATCTCAATTCCTATAG 57.166 33.333 8.81 0.00 38.44 1.31
4800 6374 7.384477 TGACATGCATCTCAATTCCTATAGAG 58.616 38.462 1.73 0.00 0.00 2.43
4802 6376 8.148437 ACATGCATCTCAATTCCTATAGAGAT 57.852 34.615 0.00 0.00 45.87 2.75
4832 6406 9.803507 TCATTTGATGCATAAGATAGGAATTCT 57.196 29.630 0.00 0.00 0.00 2.40
4884 6458 7.595819 TCCTTTTGAAATGTGAAGTATTGGT 57.404 32.000 0.00 0.00 0.00 3.67
4886 6460 8.141268 TCCTTTTGAAATGTGAAGTATTGGTTC 58.859 33.333 0.00 0.00 0.00 3.62
4894 6883 7.931015 ATGTGAAGTATTGGTTCCTATCCTA 57.069 36.000 0.00 0.00 0.00 2.94
4898 6887 8.867097 GTGAAGTATTGGTTCCTATCCTACATA 58.133 37.037 0.00 0.00 0.00 2.29
4900 6889 9.310449 GAAGTATTGGTTCCTATCCTACATAGA 57.690 37.037 0.00 0.00 0.00 1.98
4901 6890 9.670442 AAGTATTGGTTCCTATCCTACATAGAA 57.330 33.333 0.00 0.00 0.00 2.10
4929 6918 8.996651 ATAATCTATTCCTACAAACCAAAGGG 57.003 34.615 0.00 0.00 41.29 3.95
4930 6919 4.595986 TCTATTCCTACAAACCAAAGGGC 58.404 43.478 0.00 0.00 37.90 5.19
4932 6921 3.322191 TTCCTACAAACCAAAGGGCTT 57.678 42.857 0.00 0.00 37.90 4.35
4934 6923 2.175931 TCCTACAAACCAAAGGGCTTCA 59.824 45.455 0.00 0.00 37.90 3.02
4935 6924 3.165071 CCTACAAACCAAAGGGCTTCAT 58.835 45.455 0.00 0.00 37.90 2.57
4937 6926 4.399303 CCTACAAACCAAAGGGCTTCATAG 59.601 45.833 0.00 0.00 37.90 2.23
4938 6927 3.165071 ACAAACCAAAGGGCTTCATAGG 58.835 45.455 0.00 0.00 37.90 2.57
4939 6928 3.181423 ACAAACCAAAGGGCTTCATAGGA 60.181 43.478 0.00 0.00 37.90 2.94
4940 6929 3.825908 AACCAAAGGGCTTCATAGGAA 57.174 42.857 0.00 0.00 37.90 3.36
4941 6930 4.337264 AACCAAAGGGCTTCATAGGAAT 57.663 40.909 0.00 0.00 37.90 3.01
4942 6931 4.337264 ACCAAAGGGCTTCATAGGAATT 57.663 40.909 0.00 0.00 37.90 2.17
4943 6932 4.687976 ACCAAAGGGCTTCATAGGAATTT 58.312 39.130 0.00 0.00 37.90 1.82
4944 6933 5.093677 ACCAAAGGGCTTCATAGGAATTTT 58.906 37.500 0.00 0.00 37.90 1.82
4945 6934 5.547666 ACCAAAGGGCTTCATAGGAATTTTT 59.452 36.000 0.00 0.00 37.90 1.94
4946 6935 6.108687 CCAAAGGGCTTCATAGGAATTTTTC 58.891 40.000 0.00 0.00 31.34 2.29
4947 6936 9.159086 ACCAAAGGGCTTCATAGGAATTTTTCC 62.159 40.741 0.00 0.00 44.02 3.13
4998 6987 9.681062 TTCTATAAGATTCCTACAAACCAAAGG 57.319 33.333 0.00 0.00 0.00 3.11
5001 7903 5.319043 AGATTCCTACAAACCAAAGGTGA 57.681 39.130 0.00 0.00 35.34 4.02
5032 7934 2.562125 GGCAAACTGGCGGTTGATA 58.438 52.632 13.37 0.00 38.29 2.15
5064 7966 7.161891 ATCCTAGGGATTTGGATGGTGACATA 61.162 42.308 9.46 0.00 45.98 2.29
5079 7981 4.322801 GGTGACATAGGGTATGGAGCATAC 60.323 50.000 0.00 0.00 44.03 2.39
5085 7987 8.162848 ACATAGGGTATGGAGCATACAATAAT 57.837 34.615 0.00 0.00 45.86 1.28
5090 7992 9.007494 AGGGTATGGAGCATACAATAATATCAT 57.993 33.333 0.00 0.00 45.86 2.45
5140 8043 7.838079 TGGATATTCAATATGGACCAAAAGG 57.162 36.000 0.00 0.00 0.00 3.11
5146 8049 5.192927 TCAATATGGACCAAAAGGTAGCAG 58.807 41.667 0.00 0.00 0.00 4.24
5151 8054 1.266989 GACCAAAAGGTAGCAGCACAC 59.733 52.381 0.00 0.00 0.00 3.82
5154 8057 1.601903 CAAAAGGTAGCAGCACACGAA 59.398 47.619 0.00 0.00 0.00 3.85
5155 8058 1.226746 AAAGGTAGCAGCACACGAAC 58.773 50.000 0.00 0.00 0.00 3.95
5156 8059 0.393077 AAGGTAGCAGCACACGAACT 59.607 50.000 0.00 0.00 0.00 3.01
5157 8060 1.254026 AGGTAGCAGCACACGAACTA 58.746 50.000 0.00 0.00 0.00 2.24
5158 8061 1.067776 AGGTAGCAGCACACGAACTAC 60.068 52.381 0.00 0.00 33.93 2.73
5159 8062 1.336517 GGTAGCAGCACACGAACTACA 60.337 52.381 0.00 0.00 35.91 2.74
5160 8063 2.400399 GTAGCAGCACACGAACTACAA 58.600 47.619 0.00 0.00 34.65 2.41
5161 8064 1.948104 AGCAGCACACGAACTACAAA 58.052 45.000 0.00 0.00 0.00 2.83
5162 8065 1.867233 AGCAGCACACGAACTACAAAG 59.133 47.619 0.00 0.00 0.00 2.77
5163 8066 1.660333 GCAGCACACGAACTACAAAGC 60.660 52.381 0.00 0.00 0.00 3.51
5164 8067 1.597195 CAGCACACGAACTACAAAGCA 59.403 47.619 0.00 0.00 0.00 3.91
5165 8068 2.031560 CAGCACACGAACTACAAAGCAA 59.968 45.455 0.00 0.00 0.00 3.91
5166 8069 2.878406 AGCACACGAACTACAAAGCAAT 59.122 40.909 0.00 0.00 0.00 3.56
5167 8070 3.058914 AGCACACGAACTACAAAGCAATC 60.059 43.478 0.00 0.00 0.00 2.67
5168 8071 3.058914 GCACACGAACTACAAAGCAATCT 60.059 43.478 0.00 0.00 0.00 2.40
5169 8072 4.151689 GCACACGAACTACAAAGCAATCTA 59.848 41.667 0.00 0.00 0.00 1.98
5170 8073 5.163854 GCACACGAACTACAAAGCAATCTAT 60.164 40.000 0.00 0.00 0.00 1.98
5171 8074 6.470160 CACACGAACTACAAAGCAATCTATC 58.530 40.000 0.00 0.00 0.00 2.08
5172 8075 6.090763 CACACGAACTACAAAGCAATCTATCA 59.909 38.462 0.00 0.00 0.00 2.15
5173 8076 6.090898 ACACGAACTACAAAGCAATCTATCAC 59.909 38.462 0.00 0.00 0.00 3.06
5174 8077 6.311445 CACGAACTACAAAGCAATCTATCACT 59.689 38.462 0.00 0.00 0.00 3.41
5175 8078 6.874134 ACGAACTACAAAGCAATCTATCACTT 59.126 34.615 0.00 0.00 0.00 3.16
5176 8079 7.387948 ACGAACTACAAAGCAATCTATCACTTT 59.612 33.333 0.00 0.00 32.73 2.66
5177 8080 8.230486 CGAACTACAAAGCAATCTATCACTTTT 58.770 33.333 0.00 0.00 30.16 2.27
5219 8122 8.962884 TTTTTACCCTACTTTTCTTTACTCGT 57.037 30.769 0.00 0.00 0.00 4.18
5220 8123 8.962884 TTTTACCCTACTTTTCTTTACTCGTT 57.037 30.769 0.00 0.00 0.00 3.85
5221 8124 8.593492 TTTACCCTACTTTTCTTTACTCGTTC 57.407 34.615 0.00 0.00 0.00 3.95
5222 8125 6.416631 ACCCTACTTTTCTTTACTCGTTCT 57.583 37.500 0.00 0.00 0.00 3.01
5223 8126 6.824553 ACCCTACTTTTCTTTACTCGTTCTT 58.175 36.000 0.00 0.00 0.00 2.52
5224 8127 6.927936 ACCCTACTTTTCTTTACTCGTTCTTC 59.072 38.462 0.00 0.00 0.00 2.87
5225 8128 6.927381 CCCTACTTTTCTTTACTCGTTCTTCA 59.073 38.462 0.00 0.00 0.00 3.02
5226 8129 7.603024 CCCTACTTTTCTTTACTCGTTCTTCAT 59.397 37.037 0.00 0.00 0.00 2.57
5227 8130 8.989980 CCTACTTTTCTTTACTCGTTCTTCATT 58.010 33.333 0.00 0.00 0.00 2.57
5228 8131 9.798885 CTACTTTTCTTTACTCGTTCTTCATTG 57.201 33.333 0.00 0.00 0.00 2.82
5229 8132 8.209917 ACTTTTCTTTACTCGTTCTTCATTGT 57.790 30.769 0.00 0.00 0.00 2.71
5230 8133 8.674607 ACTTTTCTTTACTCGTTCTTCATTGTT 58.325 29.630 0.00 0.00 0.00 2.83
5231 8134 9.159470 CTTTTCTTTACTCGTTCTTCATTGTTC 57.841 33.333 0.00 0.00 0.00 3.18
5232 8135 8.433421 TTTCTTTACTCGTTCTTCATTGTTCT 57.567 30.769 0.00 0.00 0.00 3.01
5233 8136 8.433421 TTCTTTACTCGTTCTTCATTGTTCTT 57.567 30.769 0.00 0.00 0.00 2.52
5234 8137 8.433421 TCTTTACTCGTTCTTCATTGTTCTTT 57.567 30.769 0.00 0.00 0.00 2.52
5235 8138 9.537192 TCTTTACTCGTTCTTCATTGTTCTTTA 57.463 29.630 0.00 0.00 0.00 1.85
5247 8150 6.142139 TCATTGTTCTTTATGTTCAACTGCG 58.858 36.000 0.00 0.00 0.00 5.18
5249 8152 3.880490 TGTTCTTTATGTTCAACTGCGGT 59.120 39.130 0.00 0.00 0.00 5.68
5250 8153 4.024387 TGTTCTTTATGTTCAACTGCGGTC 60.024 41.667 0.00 0.00 0.00 4.79
5251 8154 2.734606 TCTTTATGTTCAACTGCGGTCG 59.265 45.455 0.00 0.00 0.00 4.79
5252 8155 2.442212 TTATGTTCAACTGCGGTCGA 57.558 45.000 0.00 0.00 0.00 4.20
5253 8156 1.705256 TATGTTCAACTGCGGTCGAC 58.295 50.000 7.13 7.13 0.00 4.20
5254 8157 0.949105 ATGTTCAACTGCGGTCGACC 60.949 55.000 25.28 25.28 0.00 4.79
5269 8230 3.513119 GGTCGACCTACCCTAGTTTTCTT 59.487 47.826 27.64 0.00 33.02 2.52
5274 8235 6.438425 TCGACCTACCCTAGTTTTCTTGTTAT 59.562 38.462 0.00 0.00 0.00 1.89
5276 8237 7.605309 CGACCTACCCTAGTTTTCTTGTTATTT 59.395 37.037 0.00 0.00 0.00 1.40
5277 8238 8.631480 ACCTACCCTAGTTTTCTTGTTATTTG 57.369 34.615 0.00 0.00 0.00 2.32
5284 8245 6.800072 AGTTTTCTTGTTATTTGTTCCCCA 57.200 33.333 0.00 0.00 0.00 4.96
5286 8247 7.801104 AGTTTTCTTGTTATTTGTTCCCCATT 58.199 30.769 0.00 0.00 0.00 3.16
5287 8248 7.714813 AGTTTTCTTGTTATTTGTTCCCCATTG 59.285 33.333 0.00 0.00 0.00 2.82
5289 8250 6.739331 TCTTGTTATTTGTTCCCCATTGTT 57.261 33.333 0.00 0.00 0.00 2.83
5290 8251 7.130681 TCTTGTTATTTGTTCCCCATTGTTT 57.869 32.000 0.00 0.00 0.00 2.83
5291 8252 7.569240 TCTTGTTATTTGTTCCCCATTGTTTT 58.431 30.769 0.00 0.00 0.00 2.43
5292 8253 8.049721 TCTTGTTATTTGTTCCCCATTGTTTTT 58.950 29.630 0.00 0.00 0.00 1.94
5293 8254 7.793927 TGTTATTTGTTCCCCATTGTTTTTC 57.206 32.000 0.00 0.00 0.00 2.29
5294 8255 6.480320 TGTTATTTGTTCCCCATTGTTTTTCG 59.520 34.615 0.00 0.00 0.00 3.46
5297 8273 4.571372 TGTTCCCCATTGTTTTTCGTAC 57.429 40.909 0.00 0.00 0.00 3.67
5320 8296 3.667282 CCCATAGCTGCCATGCGC 61.667 66.667 0.00 0.00 38.13 6.09
5338 8314 2.908796 CCTTACGGGGCCCTTCTC 59.091 66.667 24.38 3.16 0.00 2.87
5347 8323 2.432628 GCCCTTCTCGGACGTGTG 60.433 66.667 0.00 0.00 33.16 3.82
5354 8330 1.031235 TCTCGGACGTGTGTGGTTTA 58.969 50.000 0.00 0.00 0.00 2.01
5391 8367 2.513897 GCCGGAAGCGCAATACCT 60.514 61.111 11.47 0.00 0.00 3.08
5403 8379 2.352388 GCAATACCTAAGACACGCCAA 58.648 47.619 0.00 0.00 0.00 4.52
5404 8380 2.095372 GCAATACCTAAGACACGCCAAC 59.905 50.000 0.00 0.00 0.00 3.77
5416 8392 0.463116 ACGCCAACGAGGTCTTTTGT 60.463 50.000 0.00 0.00 43.93 2.83
5417 8393 0.661020 CGCCAACGAGGTCTTTTGTT 59.339 50.000 0.00 0.00 43.93 2.83
5421 8397 4.226761 GCCAACGAGGTCTTTTGTTAATG 58.773 43.478 0.00 0.00 40.61 1.90
5494 8491 9.705471 GAGATTTATATATCACCGAACGACTAG 57.295 37.037 6.04 0.00 0.00 2.57
5508 8505 1.063027 CGACTAGTATCGTCGCCACAA 59.937 52.381 0.00 0.00 46.12 3.33
5511 8508 0.099259 TAGTATCGTCGCCACAACGG 59.901 55.000 0.00 0.00 40.45 4.44
5522 8519 2.671619 ACAACGGGCCATTGACGG 60.672 61.111 20.62 0.00 0.00 4.79
5530 8527 2.360350 CCATTGACGGGCTGCTGT 60.360 61.111 0.00 0.00 0.00 4.40
5532 8529 1.672030 CATTGACGGGCTGCTGTCA 60.672 57.895 19.23 19.23 42.98 3.58
5534 8531 3.825160 TTGACGGGCTGCTGTCACC 62.825 63.158 21.66 5.03 44.25 4.02
5539 8536 3.426568 GGCTGCTGTCACCGCTTC 61.427 66.667 0.00 0.00 0.00 3.86
5545 8542 1.090052 GCTGTCACCGCTTCCATACC 61.090 60.000 0.00 0.00 0.00 2.73
5547 8544 0.908910 TGTCACCGCTTCCATACCAT 59.091 50.000 0.00 0.00 0.00 3.55
5552 8549 1.070758 ACCGCTTCCATACCATAGCAG 59.929 52.381 0.00 0.00 33.29 4.24
5558 8555 0.037303 CCATACCATAGCAGGCCTGG 59.963 60.000 33.46 20.21 36.09 4.45
5575 8572 2.628178 CCTGGCCTTATCGATGACAGTA 59.372 50.000 14.17 0.00 0.00 2.74
5611 8608 1.765074 GTGCCCCTAAGGACCAACA 59.235 57.895 0.00 0.00 38.24 3.33
5612 8609 0.608308 GTGCCCCTAAGGACCAACAC 60.608 60.000 0.00 0.00 38.24 3.32
5613 8610 0.770557 TGCCCCTAAGGACCAACACT 60.771 55.000 0.00 0.00 38.24 3.55
5615 8612 1.657804 CCCCTAAGGACCAACACTCT 58.342 55.000 0.00 0.00 38.24 3.24
5616 8613 2.829023 CCCCTAAGGACCAACACTCTA 58.171 52.381 0.00 0.00 38.24 2.43
5621 8623 0.178903 AGGACCAACACTCTAGGCCA 60.179 55.000 5.01 0.00 0.00 5.36
5630 8632 0.251209 ACTCTAGGCCACAGTCGTCA 60.251 55.000 5.01 0.00 0.00 4.35
5632 8634 1.066303 CTCTAGGCCACAGTCGTCATC 59.934 57.143 5.01 0.00 0.00 2.92
5638 8640 1.078709 CCACAGTCGTCATCGCAAAT 58.921 50.000 0.00 0.00 36.96 2.32
5649 8651 3.865164 GTCATCGCAAATTTGGGGAATTC 59.135 43.478 28.61 15.18 41.01 2.17
5656 8658 1.474330 ATTTGGGGAATTCGTGCCTC 58.526 50.000 0.00 0.00 37.99 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 71 1.796459 GTAGCCACCAACGTACTTGTG 59.204 52.381 0.00 0.00 0.00 3.33
61 72 1.603678 CGTAGCCACCAACGTACTTGT 60.604 52.381 0.00 0.00 34.48 3.16
62 73 1.065358 CGTAGCCACCAACGTACTTG 58.935 55.000 0.00 0.00 34.48 3.16
63 74 3.502237 CGTAGCCACCAACGTACTT 57.498 52.632 0.00 0.00 34.48 2.24
132 147 2.045438 ATGGATTGCGTTGCCGGA 60.045 55.556 5.05 0.00 33.68 5.14
406 424 4.664688 AGTTCATGTCCCATCTTCCTTT 57.335 40.909 0.00 0.00 0.00 3.11
485 510 8.409371 TGAAATGTTGCACAAATAGTTCTACAA 58.591 29.630 0.00 0.00 35.67 2.41
858 916 9.197694 CCTCCGACTTACAAATATCAGAAATAG 57.802 37.037 0.00 0.00 0.00 1.73
861 919 7.177832 TCCTCCGACTTACAAATATCAGAAA 57.822 36.000 0.00 0.00 0.00 2.52
862 920 6.785337 TCCTCCGACTTACAAATATCAGAA 57.215 37.500 0.00 0.00 0.00 3.02
863 921 6.978674 ATCCTCCGACTTACAAATATCAGA 57.021 37.500 0.00 0.00 0.00 3.27
864 922 9.542462 TTTAATCCTCCGACTTACAAATATCAG 57.458 33.333 0.00 0.00 0.00 2.90
868 926 9.116067 CCAATTTAATCCTCCGACTTACAAATA 57.884 33.333 0.00 0.00 0.00 1.40
869 927 7.416326 GCCAATTTAATCCTCCGACTTACAAAT 60.416 37.037 0.00 0.00 0.00 2.32
870 928 6.127842 GCCAATTTAATCCTCCGACTTACAAA 60.128 38.462 0.00 0.00 0.00 2.83
871 929 5.355910 GCCAATTTAATCCTCCGACTTACAA 59.644 40.000 0.00 0.00 0.00 2.41
872 930 4.879545 GCCAATTTAATCCTCCGACTTACA 59.120 41.667 0.00 0.00 0.00 2.41
873 931 4.275196 GGCCAATTTAATCCTCCGACTTAC 59.725 45.833 0.00 0.00 0.00 2.34
874 932 4.080243 TGGCCAATTTAATCCTCCGACTTA 60.080 41.667 0.61 0.00 0.00 2.24
875 933 3.288092 GGCCAATTTAATCCTCCGACTT 58.712 45.455 0.00 0.00 0.00 3.01
876 934 2.241176 TGGCCAATTTAATCCTCCGACT 59.759 45.455 0.61 0.00 0.00 4.18
877 935 2.650322 TGGCCAATTTAATCCTCCGAC 58.350 47.619 0.61 0.00 0.00 4.79
878 936 3.020984 GTTGGCCAATTTAATCCTCCGA 58.979 45.455 23.66 0.00 0.00 4.55
879 937 2.223479 CGTTGGCCAATTTAATCCTCCG 60.223 50.000 23.66 12.37 0.00 4.63
880 938 2.481276 GCGTTGGCCAATTTAATCCTCC 60.481 50.000 23.66 3.20 0.00 4.30
881 939 2.794631 CGCGTTGGCCAATTTAATCCTC 60.795 50.000 23.66 4.01 35.02 3.71
882 940 1.134175 CGCGTTGGCCAATTTAATCCT 59.866 47.619 23.66 0.00 35.02 3.24
883 941 1.133407 TCGCGTTGGCCAATTTAATCC 59.867 47.619 23.66 5.63 35.02 3.01
884 942 2.182014 GTCGCGTTGGCCAATTTAATC 58.818 47.619 23.66 6.44 35.02 1.75
885 943 1.466697 CGTCGCGTTGGCCAATTTAAT 60.467 47.619 23.66 0.00 35.02 1.40
886 944 0.110147 CGTCGCGTTGGCCAATTTAA 60.110 50.000 23.66 5.43 35.02 1.52
887 945 0.949588 TCGTCGCGTTGGCCAATTTA 60.950 50.000 23.66 5.01 35.02 1.40
888 946 2.182614 CTCGTCGCGTTGGCCAATTT 62.183 55.000 23.66 0.00 35.02 1.82
889 947 2.666862 TCGTCGCGTTGGCCAATT 60.667 55.556 23.66 0.00 35.02 2.32
890 948 2.495366 TACTCGTCGCGTTGGCCAAT 62.495 55.000 23.66 4.37 35.02 3.16
891 949 3.210223 TACTCGTCGCGTTGGCCAA 62.210 57.895 16.05 16.05 35.02 4.52
892 950 3.620300 CTACTCGTCGCGTTGGCCA 62.620 63.158 0.00 0.00 35.02 5.36
893 951 2.879462 CTACTCGTCGCGTTGGCC 60.879 66.667 5.77 0.00 35.02 5.36
894 952 2.879462 CCTACTCGTCGCGTTGGC 60.879 66.667 5.77 0.00 0.00 4.52
895 953 1.226323 CTCCTACTCGTCGCGTTGG 60.226 63.158 5.77 9.21 0.00 3.77
896 954 1.226323 CCTCCTACTCGTCGCGTTG 60.226 63.158 5.77 0.00 0.00 4.10
897 955 1.376424 TCCTCCTACTCGTCGCGTT 60.376 57.895 5.77 0.00 0.00 4.84
898 956 2.105466 GTCCTCCTACTCGTCGCGT 61.105 63.158 5.77 0.00 0.00 6.01
899 957 2.708255 GTCCTCCTACTCGTCGCG 59.292 66.667 0.00 0.00 0.00 5.87
900 958 1.031029 AAGGTCCTCCTACTCGTCGC 61.031 60.000 0.00 0.00 44.35 5.19
901 959 1.015868 GAAGGTCCTCCTACTCGTCG 58.984 60.000 0.00 0.00 44.35 5.12
902 960 2.018515 CTGAAGGTCCTCCTACTCGTC 58.981 57.143 0.00 0.00 44.35 4.20
903 961 1.355043 ACTGAAGGTCCTCCTACTCGT 59.645 52.381 0.00 0.00 44.35 4.18
904 962 1.746220 CACTGAAGGTCCTCCTACTCG 59.254 57.143 0.00 0.00 44.35 4.18
905 963 3.088789 TCACTGAAGGTCCTCCTACTC 57.911 52.381 0.00 0.00 44.35 2.59
906 964 3.544698 TTCACTGAAGGTCCTCCTACT 57.455 47.619 0.00 0.00 44.35 2.57
907 965 4.828072 AATTCACTGAAGGTCCTCCTAC 57.172 45.455 0.00 0.00 44.35 3.18
908 966 5.843019 AAAATTCACTGAAGGTCCTCCTA 57.157 39.130 0.00 0.00 44.35 2.94
910 968 5.073428 AGAAAAATTCACTGAAGGTCCTCC 58.927 41.667 0.00 0.00 0.00 4.30
911 969 6.000840 AGAGAAAAATTCACTGAAGGTCCTC 58.999 40.000 0.00 1.52 0.00 3.71
912 970 5.946486 AGAGAAAAATTCACTGAAGGTCCT 58.054 37.500 0.00 0.00 0.00 3.85
913 971 6.641169 AAGAGAAAAATTCACTGAAGGTCC 57.359 37.500 0.00 0.00 30.85 4.46
914 972 7.142021 GGAAAGAGAAAAATTCACTGAAGGTC 58.858 38.462 0.00 0.00 30.85 3.85
915 973 6.607198 TGGAAAGAGAAAAATTCACTGAAGGT 59.393 34.615 0.00 0.00 30.85 3.50
916 974 6.920210 GTGGAAAGAGAAAAATTCACTGAAGG 59.080 38.462 0.00 0.00 30.85 3.46
917 975 6.634436 CGTGGAAAGAGAAAAATTCACTGAAG 59.366 38.462 0.00 0.00 30.85 3.02
918 976 6.494842 CGTGGAAAGAGAAAAATTCACTGAA 58.505 36.000 0.00 0.00 30.85 3.02
919 977 5.505654 GCGTGGAAAGAGAAAAATTCACTGA 60.506 40.000 0.00 0.00 30.85 3.41
920 978 4.676924 GCGTGGAAAGAGAAAAATTCACTG 59.323 41.667 0.00 0.00 30.85 3.66
921 979 4.261614 GGCGTGGAAAGAGAAAAATTCACT 60.262 41.667 0.00 0.00 31.73 3.41
922 980 3.981416 GGCGTGGAAAGAGAAAAATTCAC 59.019 43.478 0.00 0.00 0.00 3.18
923 981 3.005367 GGGCGTGGAAAGAGAAAAATTCA 59.995 43.478 0.00 0.00 0.00 2.57
924 982 3.255888 AGGGCGTGGAAAGAGAAAAATTC 59.744 43.478 0.00 0.00 0.00 2.17
925 983 3.230976 AGGGCGTGGAAAGAGAAAAATT 58.769 40.909 0.00 0.00 0.00 1.82
926 984 2.876581 AGGGCGTGGAAAGAGAAAAAT 58.123 42.857 0.00 0.00 0.00 1.82
927 985 2.358322 AGGGCGTGGAAAGAGAAAAA 57.642 45.000 0.00 0.00 0.00 1.94
928 986 2.105134 TGTAGGGCGTGGAAAGAGAAAA 59.895 45.455 0.00 0.00 0.00 2.29
929 987 1.695242 TGTAGGGCGTGGAAAGAGAAA 59.305 47.619 0.00 0.00 0.00 2.52
930 988 1.001633 GTGTAGGGCGTGGAAAGAGAA 59.998 52.381 0.00 0.00 0.00 2.87
931 989 0.606604 GTGTAGGGCGTGGAAAGAGA 59.393 55.000 0.00 0.00 0.00 3.10
932 990 0.320374 TGTGTAGGGCGTGGAAAGAG 59.680 55.000 0.00 0.00 0.00 2.85
933 991 0.034337 GTGTGTAGGGCGTGGAAAGA 59.966 55.000 0.00 0.00 0.00 2.52
934 992 0.034896 AGTGTGTAGGGCGTGGAAAG 59.965 55.000 0.00 0.00 0.00 2.62
969 1027 2.683465 GCAGGGCAGAGGGGAATCA 61.683 63.158 0.00 0.00 0.00 2.57
970 1028 2.194326 GCAGGGCAGAGGGGAATC 59.806 66.667 0.00 0.00 0.00 2.52
1338 1605 2.107726 GTGGGTTTTAGGGACCTTCAGT 59.892 50.000 0.00 0.00 37.34 3.41
1341 1608 3.520691 AAGTGGGTTTTAGGGACCTTC 57.479 47.619 0.00 0.00 37.34 3.46
1345 1612 1.616865 GGCAAAGTGGGTTTTAGGGAC 59.383 52.381 0.00 0.00 0.00 4.46
1346 1613 1.501604 AGGCAAAGTGGGTTTTAGGGA 59.498 47.619 0.00 0.00 0.00 4.20
1347 1614 2.009681 AGGCAAAGTGGGTTTTAGGG 57.990 50.000 0.00 0.00 0.00 3.53
1348 1615 4.415881 AAAAGGCAAAGTGGGTTTTAGG 57.584 40.909 0.00 0.00 0.00 2.69
1371 2491 5.163509 CCACAGAAAACATCGGAGATAGAGA 60.164 44.000 0.00 0.00 45.12 3.10
1373 2493 4.466370 ACCACAGAAAACATCGGAGATAGA 59.534 41.667 0.00 0.00 45.12 1.98
1466 2586 2.770802 AGAGAGAACATGATGGGTGGAG 59.229 50.000 0.00 0.00 0.00 3.86
1810 2930 7.023575 GCATAAACCATCTTACAAGAACAGTG 58.976 38.462 0.00 0.00 38.77 3.66
2028 3148 7.355778 GTGTTGAGACCACTGAATAGAAAAAG 58.644 38.462 0.00 0.00 0.00 2.27
2086 3206 5.815581 AGCCCTCACAGTAAAATATCACAA 58.184 37.500 0.00 0.00 0.00 3.33
2165 3478 4.031426 GCCGTCTACTTTTCGTACATGAAG 59.969 45.833 0.00 0.00 0.00 3.02
2297 3610 6.794534 TGAATATGATCTCTAGCCCTCACTA 58.205 40.000 0.00 0.00 0.00 2.74
2299 3612 5.991933 TGAATATGATCTCTAGCCCTCAC 57.008 43.478 0.00 0.00 0.00 3.51
2421 3949 8.739039 CAACTGTTGGATTTAAGATACCAATGA 58.261 33.333 12.66 0.00 42.91 2.57
2483 4011 4.218417 GGTTCTAGAAAAGCATGGAAGCAA 59.782 41.667 6.78 0.00 36.85 3.91
2537 4068 1.805254 CAAGCTGGCTTGGGAATCG 59.195 57.895 23.00 0.68 46.88 3.34
2692 4242 0.327191 AGTATGGAACCGGTGGGGAT 60.327 55.000 8.52 0.31 39.97 3.85
2723 4273 4.070630 ACCCCATTGATTGTTGTTTGTG 57.929 40.909 0.00 0.00 0.00 3.33
2782 4332 8.316214 AGATTGCCTTGTGAAATTATTCAACAT 58.684 29.630 0.00 0.00 46.66 2.71
2939 4489 6.286758 CACTTAGAGCATACATCCACTCAAT 58.713 40.000 0.00 0.00 0.00 2.57
2961 4511 5.895928 TCTCAGATGATGTAGTGTTAGCAC 58.104 41.667 0.72 0.72 45.57 4.40
2962 4512 5.654209 ACTCTCAGATGATGTAGTGTTAGCA 59.346 40.000 0.00 0.00 0.00 3.49
2963 4513 6.142818 ACTCTCAGATGATGTAGTGTTAGC 57.857 41.667 0.00 0.00 0.00 3.09
2964 4514 6.475076 GCAACTCTCAGATGATGTAGTGTTAG 59.525 42.308 0.00 0.00 29.62 2.34
2965 4515 6.071391 TGCAACTCTCAGATGATGTAGTGTTA 60.071 38.462 0.00 0.00 29.62 2.41
2966 4516 5.174395 GCAACTCTCAGATGATGTAGTGTT 58.826 41.667 0.00 0.00 0.00 3.32
2967 4517 4.221482 TGCAACTCTCAGATGATGTAGTGT 59.779 41.667 0.00 0.00 0.00 3.55
2968 4518 4.752146 TGCAACTCTCAGATGATGTAGTG 58.248 43.478 0.00 0.00 0.00 2.74
2969 4519 4.465660 ACTGCAACTCTCAGATGATGTAGT 59.534 41.667 0.00 0.77 35.61 2.73
2970 4520 5.008619 ACTGCAACTCTCAGATGATGTAG 57.991 43.478 0.00 0.00 35.61 2.74
2971 4521 5.186603 AGAACTGCAACTCTCAGATGATGTA 59.813 40.000 0.00 0.00 35.61 2.29
2972 4522 3.977134 ACTGCAACTCTCAGATGATGT 57.023 42.857 0.00 0.00 35.61 3.06
2973 4523 4.505808 AGAACTGCAACTCTCAGATGATG 58.494 43.478 0.00 0.00 35.61 3.07
2974 4524 4.822685 AGAACTGCAACTCTCAGATGAT 57.177 40.909 0.00 0.00 35.61 2.45
2975 4525 5.728637 TTAGAACTGCAACTCTCAGATGA 57.271 39.130 0.58 0.00 35.61 2.92
2976 4526 5.873712 ACATTAGAACTGCAACTCTCAGATG 59.126 40.000 0.58 7.09 35.61 2.90
2977 4527 6.047511 ACATTAGAACTGCAACTCTCAGAT 57.952 37.500 0.58 0.00 35.61 2.90
2978 4528 5.474578 ACATTAGAACTGCAACTCTCAGA 57.525 39.130 0.58 0.00 35.61 3.27
2979 4529 6.551385 AAACATTAGAACTGCAACTCTCAG 57.449 37.500 0.58 0.00 37.56 3.35
2980 4530 6.318648 ACAAAACATTAGAACTGCAACTCTCA 59.681 34.615 0.58 0.00 0.00 3.27
2985 4535 6.885735 ACAACAAAACATTAGAACTGCAAC 57.114 33.333 0.00 0.00 0.00 4.17
3040 4590 2.653726 ACAGACAAGTTGCCACATTGA 58.346 42.857 1.81 0.00 0.00 2.57
3067 4617 9.467258 AACATAACAGACAAACATGAGAAATTG 57.533 29.630 0.00 0.00 0.00 2.32
3574 5125 7.786046 TGTCAAATAGAGGTCCTTACTACAA 57.214 36.000 0.00 0.00 0.00 2.41
3575 5126 7.147724 CCATGTCAAATAGAGGTCCTTACTACA 60.148 40.741 0.00 0.00 0.00 2.74
3609 5164 0.872388 CGGCAACACCCTAACAAGTC 59.128 55.000 0.00 0.00 33.26 3.01
3653 5208 6.319658 TGATCAGCTTAAGGATCCATGAAAAC 59.680 38.462 15.82 0.00 39.30 2.43
3718 5273 5.335661 GCGGATAACAGTGGAAGTTTGAAAT 60.336 40.000 0.00 0.00 0.00 2.17
3792 5347 5.125578 TGCAAGTTATGACGTGTAGATCTCT 59.874 40.000 0.00 0.00 37.54 3.10
3793 5348 5.340803 TGCAAGTTATGACGTGTAGATCTC 58.659 41.667 0.00 0.00 37.54 2.75
3816 5371 7.715657 TGAATGATTTGTGCAAGTAGTTTCTT 58.284 30.769 0.00 0.00 0.00 2.52
3898 5453 9.526286 GCGACAGTTTAAGTAGAATAAACTTTC 57.474 33.333 8.52 10.55 46.25 2.62
3909 5464 7.404139 ACTTAAGTTGCGACAGTTTAAGTAG 57.596 36.000 20.43 4.95 40.70 2.57
4083 5638 6.741992 TGCTATAGACAAAAACAGTCATGG 57.258 37.500 3.21 0.00 38.46 3.66
4108 5663 3.201290 ACACTTCCATCAAGCGATCATC 58.799 45.455 0.00 0.00 35.17 2.92
4109 5664 3.201290 GACACTTCCATCAAGCGATCAT 58.799 45.455 0.00 0.00 35.17 2.45
4120 5678 3.884895 TCAAACACACTGACACTTCCAT 58.115 40.909 0.00 0.00 0.00 3.41
4288 5846 1.287146 GTGAGGTACTGGGGAGGAGTA 59.713 57.143 0.00 0.00 41.55 2.59
4447 6016 4.398319 CAGCGGGGGAAAAGATAACATAT 58.602 43.478 0.00 0.00 0.00 1.78
4524 6098 0.827089 TCCAGAACAACGGTCGGGTA 60.827 55.000 0.00 0.00 0.00 3.69
4531 6105 0.868406 GCTTGACTCCAGAACAACGG 59.132 55.000 0.00 0.00 0.00 4.44
4547 6121 7.147976 GTCACTTGAGACCAAAATTATTGCTT 58.852 34.615 0.00 0.00 32.36 3.91
4626 6200 3.383761 CACAAATGCCACAAGGAAAGTC 58.616 45.455 0.00 0.00 36.89 3.01
4648 6222 8.029642 ACCAAAGACGAAGTATTCTGTAAATG 57.970 34.615 0.00 0.00 43.10 2.32
4689 6263 7.658179 TTCTATCATTAGCAATCGATCCAAC 57.342 36.000 0.00 0.00 0.00 3.77
4710 6284 3.689649 GCAAGACGGTACCATTCAATTCT 59.310 43.478 13.54 0.00 0.00 2.40
4713 6287 3.009723 CTGCAAGACGGTACCATTCAAT 58.990 45.455 13.54 0.00 34.07 2.57
4743 6317 6.500589 TCCTATCCTATGAACCAAAGAAGG 57.499 41.667 0.00 0.00 0.00 3.46
4745 6319 9.408648 GAAATTCCTATCCTATGAACCAAAGAA 57.591 33.333 0.00 0.00 0.00 2.52
4747 6321 8.752005 TGAAATTCCTATCCTATGAACCAAAG 57.248 34.615 0.00 0.00 0.00 2.77
4750 6324 9.964354 CATATGAAATTCCTATCCTATGAACCA 57.036 33.333 0.00 0.00 30.36 3.67
4756 6330 9.624373 GCATGTCATATGAAATTCCTATCCTAT 57.376 33.333 7.07 0.00 0.00 2.57
4758 6332 7.464273 TGCATGTCATATGAAATTCCTATCCT 58.536 34.615 7.07 0.00 0.00 3.24
4759 6333 7.692460 TGCATGTCATATGAAATTCCTATCC 57.308 36.000 7.07 0.00 0.00 2.59
4762 6336 8.158789 TGAGATGCATGTCATATGAAATTCCTA 58.841 33.333 21.70 0.00 35.05 2.94
4763 6337 7.002276 TGAGATGCATGTCATATGAAATTCCT 58.998 34.615 21.70 1.88 35.05 3.36
4765 6339 9.692749 AATTGAGATGCATGTCATATGAAATTC 57.307 29.630 25.41 2.52 35.05 2.17
4766 6340 9.692749 GAATTGAGATGCATGTCATATGAAATT 57.307 29.630 25.41 19.70 35.05 1.82
4767 6341 8.304596 GGAATTGAGATGCATGTCATATGAAAT 58.695 33.333 25.41 12.99 35.05 2.17
4769 6343 7.002276 AGGAATTGAGATGCATGTCATATGAA 58.998 34.615 25.41 11.97 35.05 2.57
4770 6344 6.540083 AGGAATTGAGATGCATGTCATATGA 58.460 36.000 25.41 12.33 35.05 2.15
4771 6345 6.819397 AGGAATTGAGATGCATGTCATATG 57.181 37.500 25.41 0.00 35.05 1.78
4772 6346 9.833917 CTATAGGAATTGAGATGCATGTCATAT 57.166 33.333 25.41 20.22 35.05 1.78
4774 6348 7.914859 TCTATAGGAATTGAGATGCATGTCAT 58.085 34.615 25.41 13.07 38.32 3.06
4776 6350 7.609960 TCTCTATAGGAATTGAGATGCATGTC 58.390 38.462 16.63 16.63 38.53 3.06
4806 6380 9.803507 AGAATTCCTATCTTATGCATCAAATGA 57.196 29.630 0.19 0.00 0.00 2.57
4859 6433 8.017418 ACCAATACTTCACATTTCAAAAGGAA 57.983 30.769 0.00 0.00 0.00 3.36
4862 6436 8.143835 AGGAACCAATACTTCACATTTCAAAAG 58.856 33.333 0.00 0.00 0.00 2.27
4865 6439 8.877864 ATAGGAACCAATACTTCACATTTCAA 57.122 30.769 0.00 0.00 0.00 2.69
4867 6441 7.775561 AGGATAGGAACCAATACTTCACATTTC 59.224 37.037 0.00 0.00 0.00 2.17
4868 6442 7.643123 AGGATAGGAACCAATACTTCACATTT 58.357 34.615 0.00 0.00 0.00 2.32
4869 6443 7.213178 AGGATAGGAACCAATACTTCACATT 57.787 36.000 0.00 0.00 0.00 2.71
4870 6444 6.831664 AGGATAGGAACCAATACTTCACAT 57.168 37.500 0.00 0.00 0.00 3.21
4871 6445 6.670464 TGTAGGATAGGAACCAATACTTCACA 59.330 38.462 0.00 0.00 0.00 3.58
4874 6448 9.310449 TCTATGTAGGATAGGAACCAATACTTC 57.690 37.037 0.00 0.00 0.00 3.01
4875 6449 9.670442 TTCTATGTAGGATAGGAACCAATACTT 57.330 33.333 0.00 0.00 0.00 2.24
4876 6450 9.670442 TTTCTATGTAGGATAGGAACCAATACT 57.330 33.333 0.00 0.00 0.00 2.12
4904 6893 7.505923 GCCCTTTGGTTTGTAGGAATAGATTAT 59.494 37.037 0.00 0.00 0.00 1.28
4905 6894 6.831868 GCCCTTTGGTTTGTAGGAATAGATTA 59.168 38.462 0.00 0.00 0.00 1.75
4906 6895 5.656859 GCCCTTTGGTTTGTAGGAATAGATT 59.343 40.000 0.00 0.00 0.00 2.40
4907 6896 5.044105 AGCCCTTTGGTTTGTAGGAATAGAT 60.044 40.000 0.00 0.00 0.00 1.98
4908 6897 4.291249 AGCCCTTTGGTTTGTAGGAATAGA 59.709 41.667 0.00 0.00 0.00 1.98
4910 6899 4.668138 AGCCCTTTGGTTTGTAGGAATA 57.332 40.909 0.00 0.00 0.00 1.75
4913 6902 2.175931 TGAAGCCCTTTGGTTTGTAGGA 59.824 45.455 0.00 0.00 34.87 2.94
4914 6903 2.593026 TGAAGCCCTTTGGTTTGTAGG 58.407 47.619 0.00 0.00 34.87 3.18
4916 6905 4.043561 TCCTATGAAGCCCTTTGGTTTGTA 59.956 41.667 0.00 0.00 34.87 2.41
4923 6912 6.108687 GGAAAAATTCCTATGAAGCCCTTTG 58.891 40.000 1.86 0.00 46.57 2.77
4925 6914 5.939764 GGAAAAATTCCTATGAAGCCCTT 57.060 39.130 1.86 0.00 46.57 3.95
4972 6961 9.681062 CCTTTGGTTTGTAGGAATCTTATAGAA 57.319 33.333 0.00 0.00 0.00 2.10
4973 6962 8.832735 ACCTTTGGTTTGTAGGAATCTTATAGA 58.167 33.333 0.00 0.00 27.29 1.98
4974 6963 8.893727 CACCTTTGGTTTGTAGGAATCTTATAG 58.106 37.037 0.00 0.00 31.02 1.31
4975 6964 8.607713 TCACCTTTGGTTTGTAGGAATCTTATA 58.392 33.333 0.00 0.00 31.02 0.98
4977 6966 6.713450 GTCACCTTTGGTTTGTAGGAATCTTA 59.287 38.462 0.00 0.00 31.02 2.10
4978 6967 5.535030 GTCACCTTTGGTTTGTAGGAATCTT 59.465 40.000 0.00 0.00 31.02 2.40
4979 6968 5.070685 GTCACCTTTGGTTTGTAGGAATCT 58.929 41.667 0.00 0.00 31.02 2.40
4980 6969 4.217767 GGTCACCTTTGGTTTGTAGGAATC 59.782 45.833 0.00 0.00 31.02 2.52
4981 6970 4.141018 AGGTCACCTTTGGTTTGTAGGAAT 60.141 41.667 0.00 0.00 31.02 3.01
4983 6972 2.781174 AGGTCACCTTTGGTTTGTAGGA 59.219 45.455 0.00 0.00 31.02 2.94
4984 6973 3.223674 AGGTCACCTTTGGTTTGTAGG 57.776 47.619 0.00 0.00 31.02 3.18
4985 6974 5.591067 TGTTTAGGTCACCTTTGGTTTGTAG 59.409 40.000 0.00 0.00 34.61 2.74
4986 6975 5.507637 TGTTTAGGTCACCTTTGGTTTGTA 58.492 37.500 0.00 0.00 34.61 2.41
4987 6976 4.345854 TGTTTAGGTCACCTTTGGTTTGT 58.654 39.130 0.00 0.00 34.61 2.83
4988 6977 4.993029 TGTTTAGGTCACCTTTGGTTTG 57.007 40.909 0.00 0.00 34.61 2.93
4989 6978 7.256154 CCATATTGTTTAGGTCACCTTTGGTTT 60.256 37.037 0.00 0.00 34.61 3.27
4990 6979 6.210584 CCATATTGTTTAGGTCACCTTTGGTT 59.789 38.462 0.00 0.00 34.61 3.67
4991 6980 5.714806 CCATATTGTTTAGGTCACCTTTGGT 59.285 40.000 0.00 0.00 34.61 3.67
4992 6981 5.394115 GCCATATTGTTTAGGTCACCTTTGG 60.394 44.000 0.00 0.00 34.61 3.28
4993 6982 5.184864 TGCCATATTGTTTAGGTCACCTTTG 59.815 40.000 0.00 0.00 34.61 2.77
4994 6983 5.329399 TGCCATATTGTTTAGGTCACCTTT 58.671 37.500 0.00 0.00 34.61 3.11
4998 6987 6.092748 CAGTTTGCCATATTGTTTAGGTCAC 58.907 40.000 0.00 0.00 0.00 3.67
5001 7903 4.081697 GCCAGTTTGCCATATTGTTTAGGT 60.082 41.667 0.00 0.00 0.00 3.08
5032 7934 4.641868 TCCAAATCCCTAGGATAGTTGGT 58.358 43.478 27.96 2.56 44.37 3.67
5064 7966 8.392631 TGATATTATTGTATGCTCCATACCCT 57.607 34.615 11.58 3.53 44.11 4.34
5112 8014 9.883142 TTTTGGTCCATATTGAATATCCAAAAC 57.117 29.630 24.03 9.21 39.32 2.43
5140 8043 2.060326 TGTAGTTCGTGTGCTGCTAC 57.940 50.000 0.00 0.00 34.35 3.58
5146 8049 2.748461 TTGCTTTGTAGTTCGTGTGC 57.252 45.000 0.00 0.00 0.00 4.57
5151 8054 6.893958 AGTGATAGATTGCTTTGTAGTTCG 57.106 37.500 0.00 0.00 0.00 3.95
5194 8097 8.962884 ACGAGTAAAGAAAAGTAGGGTAAAAA 57.037 30.769 0.00 0.00 0.00 1.94
5195 8098 8.962884 AACGAGTAAAGAAAAGTAGGGTAAAA 57.037 30.769 0.00 0.00 0.00 1.52
5196 8099 8.424133 AGAACGAGTAAAGAAAAGTAGGGTAAA 58.576 33.333 0.00 0.00 0.00 2.01
5197 8100 7.955918 AGAACGAGTAAAGAAAAGTAGGGTAA 58.044 34.615 0.00 0.00 0.00 2.85
5198 8101 7.530426 AGAACGAGTAAAGAAAAGTAGGGTA 57.470 36.000 0.00 0.00 0.00 3.69
5199 8102 6.416631 AGAACGAGTAAAGAAAAGTAGGGT 57.583 37.500 0.00 0.00 0.00 4.34
5200 8103 6.927381 TGAAGAACGAGTAAAGAAAAGTAGGG 59.073 38.462 0.00 0.00 0.00 3.53
5201 8104 7.941795 TGAAGAACGAGTAAAGAAAAGTAGG 57.058 36.000 0.00 0.00 0.00 3.18
5202 8105 9.798885 CAATGAAGAACGAGTAAAGAAAAGTAG 57.201 33.333 0.00 0.00 0.00 2.57
5203 8106 9.321562 ACAATGAAGAACGAGTAAAGAAAAGTA 57.678 29.630 0.00 0.00 0.00 2.24
5204 8107 8.209917 ACAATGAAGAACGAGTAAAGAAAAGT 57.790 30.769 0.00 0.00 0.00 2.66
5205 8108 9.159470 GAACAATGAAGAACGAGTAAAGAAAAG 57.841 33.333 0.00 0.00 0.00 2.27
5206 8109 8.889717 AGAACAATGAAGAACGAGTAAAGAAAA 58.110 29.630 0.00 0.00 0.00 2.29
5207 8110 8.433421 AGAACAATGAAGAACGAGTAAAGAAA 57.567 30.769 0.00 0.00 0.00 2.52
5208 8111 8.433421 AAGAACAATGAAGAACGAGTAAAGAA 57.567 30.769 0.00 0.00 0.00 2.52
5209 8112 8.433421 AAAGAACAATGAAGAACGAGTAAAGA 57.567 30.769 0.00 0.00 0.00 2.52
5212 8115 9.268268 ACATAAAGAACAATGAAGAACGAGTAA 57.732 29.630 0.00 0.00 0.00 2.24
5213 8116 8.827177 ACATAAAGAACAATGAAGAACGAGTA 57.173 30.769 0.00 0.00 0.00 2.59
5214 8117 7.730364 ACATAAAGAACAATGAAGAACGAGT 57.270 32.000 0.00 0.00 0.00 4.18
5215 8118 8.282592 TGAACATAAAGAACAATGAAGAACGAG 58.717 33.333 0.00 0.00 0.00 4.18
5216 8119 8.148807 TGAACATAAAGAACAATGAAGAACGA 57.851 30.769 0.00 0.00 0.00 3.85
5217 8120 8.682016 GTTGAACATAAAGAACAATGAAGAACG 58.318 33.333 0.00 0.00 0.00 3.95
5218 8121 9.736023 AGTTGAACATAAAGAACAATGAAGAAC 57.264 29.630 0.00 0.00 0.00 3.01
5219 8122 9.734620 CAGTTGAACATAAAGAACAATGAAGAA 57.265 29.630 0.00 0.00 0.00 2.52
5220 8123 7.862372 GCAGTTGAACATAAAGAACAATGAAGA 59.138 33.333 0.00 0.00 0.00 2.87
5221 8124 7.149080 CGCAGTTGAACATAAAGAACAATGAAG 60.149 37.037 0.00 0.00 0.00 3.02
5222 8125 6.636447 CGCAGTTGAACATAAAGAACAATGAA 59.364 34.615 0.00 0.00 0.00 2.57
5223 8126 6.142139 CGCAGTTGAACATAAAGAACAATGA 58.858 36.000 0.00 0.00 0.00 2.57
5224 8127 5.343058 CCGCAGTTGAACATAAAGAACAATG 59.657 40.000 0.00 0.00 0.00 2.82
5225 8128 5.009610 ACCGCAGTTGAACATAAAGAACAAT 59.990 36.000 0.00 0.00 0.00 2.71
5226 8129 4.336993 ACCGCAGTTGAACATAAAGAACAA 59.663 37.500 0.00 0.00 0.00 2.83
5227 8130 3.880490 ACCGCAGTTGAACATAAAGAACA 59.120 39.130 0.00 0.00 0.00 3.18
5228 8131 4.464112 GACCGCAGTTGAACATAAAGAAC 58.536 43.478 0.00 0.00 0.00 3.01
5229 8132 3.185594 CGACCGCAGTTGAACATAAAGAA 59.814 43.478 0.00 0.00 0.00 2.52
5230 8133 2.734606 CGACCGCAGTTGAACATAAAGA 59.265 45.455 0.00 0.00 0.00 2.52
5231 8134 2.734606 TCGACCGCAGTTGAACATAAAG 59.265 45.455 0.00 0.00 33.20 1.85
5232 8135 2.477375 GTCGACCGCAGTTGAACATAAA 59.523 45.455 3.51 0.00 38.17 1.40
5233 8136 2.063266 GTCGACCGCAGTTGAACATAA 58.937 47.619 3.51 0.00 38.17 1.90
5234 8137 1.670674 GGTCGACCGCAGTTGAACATA 60.671 52.381 20.85 0.00 42.88 2.29
5235 8138 0.949105 GGTCGACCGCAGTTGAACAT 60.949 55.000 20.85 0.00 42.88 2.71
5247 8150 3.095332 AGAAAACTAGGGTAGGTCGACC 58.905 50.000 27.67 27.67 38.93 4.79
5249 8152 4.154942 ACAAGAAAACTAGGGTAGGTCGA 58.845 43.478 0.00 0.00 0.00 4.20
5250 8153 4.532314 ACAAGAAAACTAGGGTAGGTCG 57.468 45.455 0.00 0.00 0.00 4.79
5251 8154 8.727910 CAAATAACAAGAAAACTAGGGTAGGTC 58.272 37.037 0.00 0.00 0.00 3.85
5252 8155 8.222637 ACAAATAACAAGAAAACTAGGGTAGGT 58.777 33.333 0.00 0.00 0.00 3.08
5253 8156 8.631480 ACAAATAACAAGAAAACTAGGGTAGG 57.369 34.615 0.00 0.00 0.00 3.18
5269 8230 6.480320 CGAAAAACAATGGGGAACAAATAACA 59.520 34.615 0.00 0.00 0.00 2.41
5274 8235 4.473477 ACGAAAAACAATGGGGAACAAA 57.527 36.364 0.00 0.00 0.00 2.83
5276 8237 3.003482 CGTACGAAAAACAATGGGGAACA 59.997 43.478 10.44 0.00 0.00 3.18
5277 8238 3.557508 CGTACGAAAAACAATGGGGAAC 58.442 45.455 10.44 0.00 0.00 3.62
5284 8245 1.068816 GGCTGCCGTACGAAAAACAAT 60.069 47.619 18.76 0.00 0.00 2.71
5286 8247 1.508808 GGGCTGCCGTACGAAAAACA 61.509 55.000 18.76 5.83 0.00 2.83
5287 8248 1.208358 GGGCTGCCGTACGAAAAAC 59.792 57.895 18.76 3.74 0.00 2.43
5289 8250 0.249676 TATGGGCTGCCGTACGAAAA 59.750 50.000 18.76 0.21 0.00 2.29
5290 8251 0.179094 CTATGGGCTGCCGTACGAAA 60.179 55.000 18.76 3.02 0.00 3.46
5291 8252 1.440060 CTATGGGCTGCCGTACGAA 59.560 57.895 18.76 3.42 0.00 3.85
5292 8253 3.125607 CTATGGGCTGCCGTACGA 58.874 61.111 18.76 0.00 0.00 3.43
5293 8254 2.661866 GCTATGGGCTGCCGTACG 60.662 66.667 13.40 8.69 38.06 3.67
5331 8307 1.372997 CACACACGTCCGAGAAGGG 60.373 63.158 0.00 0.00 41.52 3.95
5333 8309 0.249322 AACCACACACGTCCGAGAAG 60.249 55.000 0.00 0.00 0.00 2.85
5334 8310 0.176219 AAACCACACACGTCCGAGAA 59.824 50.000 0.00 0.00 0.00 2.87
5338 8314 0.032403 TCCTAAACCACACACGTCCG 59.968 55.000 0.00 0.00 0.00 4.79
5347 8323 5.299531 GGCTCCTTCATAAATCCTAAACCAC 59.700 44.000 0.00 0.00 0.00 4.16
5354 8330 2.224402 GCGAGGCTCCTTCATAAATCCT 60.224 50.000 9.32 0.00 0.00 3.24
5390 8366 0.038526 ACCTCGTTGGCGTGTCTTAG 60.039 55.000 0.00 0.00 40.22 2.18
5391 8367 0.038892 GACCTCGTTGGCGTGTCTTA 60.039 55.000 0.00 0.00 40.22 2.10
5403 8379 5.008316 GTGAACCATTAACAAAAGACCTCGT 59.992 40.000 0.00 0.00 0.00 4.18
5404 8380 5.238650 AGTGAACCATTAACAAAAGACCTCG 59.761 40.000 0.00 0.00 0.00 4.63
5474 8471 8.345224 CGATACTAGTCGTTCGGTGATATATA 57.655 38.462 0.00 0.00 36.88 0.86
5494 8491 2.162754 CCCGTTGTGGCGACGATAC 61.163 63.158 10.14 0.00 43.17 2.24
5514 8511 1.672030 TGACAGCAGCCCGTCAATG 60.672 57.895 11.90 0.00 39.14 2.82
5517 8514 4.314440 GGTGACAGCAGCCCGTCA 62.314 66.667 10.54 10.54 39.77 4.35
5522 8519 3.426568 GAAGCGGTGACAGCAGCC 61.427 66.667 10.82 0.00 39.30 4.85
5525 8522 0.391130 GTATGGAAGCGGTGACAGCA 60.391 55.000 10.82 0.00 37.01 4.41
5529 8526 2.755650 CTATGGTATGGAAGCGGTGAC 58.244 52.381 0.00 0.00 0.00 3.67
5530 8527 1.070134 GCTATGGTATGGAAGCGGTGA 59.930 52.381 0.00 0.00 0.00 4.02
5532 8529 1.070758 CTGCTATGGTATGGAAGCGGT 59.929 52.381 0.00 0.00 37.80 5.68
5534 8531 1.800805 CCTGCTATGGTATGGAAGCG 58.199 55.000 0.00 0.00 37.80 4.68
5539 8536 0.037303 CCAGGCCTGCTATGGTATGG 59.963 60.000 28.39 6.59 0.00 2.74
5558 8555 4.585955 TTCCTACTGTCATCGATAAGGC 57.414 45.455 0.00 0.00 0.00 4.35
5575 8572 1.038280 ACGTGGACGAAGACTTTCCT 58.962 50.000 6.12 0.00 43.02 3.36
5611 8608 0.251209 TGACGACTGTGGCCTAGAGT 60.251 55.000 13.53 9.24 35.25 3.24
5612 8609 1.066303 GATGACGACTGTGGCCTAGAG 59.934 57.143 13.53 6.25 0.00 2.43
5613 8610 1.103803 GATGACGACTGTGGCCTAGA 58.896 55.000 13.53 0.00 0.00 2.43
5615 8612 1.807226 CGATGACGACTGTGGCCTA 59.193 57.895 3.32 0.00 42.66 3.93
5616 8613 2.573869 CGATGACGACTGTGGCCT 59.426 61.111 3.32 0.00 42.66 5.19
5621 8623 2.095768 CCAAATTTGCGATGACGACTGT 60.096 45.455 12.92 0.00 42.66 3.55
5630 8632 2.495669 ACGAATTCCCCAAATTTGCGAT 59.504 40.909 12.92 1.02 40.94 4.58
5632 8634 1.991965 CACGAATTCCCCAAATTTGCG 59.008 47.619 12.92 10.96 40.94 4.85
5638 8640 0.404040 AGAGGCACGAATTCCCCAAA 59.596 50.000 0.00 0.00 0.00 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.