Multiple sequence alignment - TraesCS5A01G106000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G106000 chr5A 100.000 5303 0 0 1 5303 172460290 172465592 0.000000e+00 9793.0
1 TraesCS5A01G106000 chr5A 100.000 2485 0 0 5769 8253 172466058 172468542 0.000000e+00 4590.0
2 TraesCS5A01G106000 chr5A 96.388 1744 39 3 6350 8070 172518785 172520527 0.000000e+00 2850.0
3 TraesCS5A01G106000 chr5A 96.594 969 32 1 4335 5303 172582323 172583290 0.000000e+00 1605.0
4 TraesCS5A01G106000 chr5A 98.520 608 9 0 4335 4942 172508931 172509538 0.000000e+00 1074.0
5 TraesCS5A01G106000 chr5A 97.595 499 11 1 5851 6349 172518243 172518740 0.000000e+00 854.0
6 TraesCS5A01G106000 chr5A 97.753 267 6 0 5851 6117 172583456 172583722 2.100000e-125 460.0
7 TraesCS5A01G106000 chr5A 97.719 263 5 1 1 263 172439593 172439854 1.260000e-122 451.0
8 TraesCS5A01G106000 chr5A 97.368 266 6 1 1 266 463025892 463026156 1.260000e-122 451.0
9 TraesCS5A01G106000 chr5A 97.328 262 5 1 1 262 686104560 686104819 2.110000e-120 444.0
10 TraesCS5A01G106000 chr5A 96.569 204 6 1 5100 5303 172517875 172518077 3.690000e-88 337.0
11 TraesCS5A01G106000 chr5A 96.396 111 1 1 8146 8253 172520526 172520636 6.580000e-41 180.0
12 TraesCS5A01G106000 chr5A 100.000 82 0 0 5921 6002 172466058 172466139 1.430000e-32 152.0
13 TraesCS5A01G106000 chr5A 100.000 82 0 0 5769 5850 172466210 172466291 1.430000e-32 152.0
14 TraesCS5A01G106000 chr5A 96.591 88 3 0 3878 3965 172464136 172464223 6.670000e-31 147.0
15 TraesCS5A01G106000 chr5A 96.591 88 3 0 3847 3934 172464167 172464254 6.670000e-31 147.0
16 TraesCS5A01G106000 chr5A 97.561 82 2 0 5769 5850 172583526 172583607 3.110000e-29 141.0
17 TraesCS5A01G106000 chr5A 81.609 174 22 6 4309 4478 572826684 572826517 1.440000e-27 135.0
18 TraesCS5A01G106000 chr5A 95.122 82 3 1 5769 5850 172518313 172518393 2.420000e-25 128.0
19 TraesCS5A01G106000 chr5A 94.737 57 3 0 3909 3965 172464136 172464192 1.140000e-13 89.8
20 TraesCS5A01G106000 chr5A 94.737 57 3 0 3847 3903 172464198 172464254 1.140000e-13 89.8
21 TraesCS5A01G106000 chr5A 88.000 50 5 1 4265 4314 547344985 547344937 3.220000e-04 58.4
22 TraesCS5A01G106000 chr5B 96.208 3191 61 18 759 3906 185727681 185724508 0.000000e+00 5168.0
23 TraesCS5A01G106000 chr5B 92.960 1108 39 13 4183 5284 185724190 185723116 0.000000e+00 1578.0
24 TraesCS5A01G106000 chr5B 94.543 623 19 7 6902 7522 185721485 185720876 0.000000e+00 948.0
25 TraesCS5A01G106000 chr5B 96.780 559 15 2 6350 6905 185722109 185721551 0.000000e+00 929.0
26 TraesCS5A01G106000 chr5B 94.885 391 18 1 5957 6347 185722543 185722155 1.970000e-170 610.0
27 TraesCS5A01G106000 chr5B 84.480 625 41 19 7583 8175 185720878 185720278 4.320000e-157 566.0
28 TraesCS5A01G106000 chr5B 86.032 494 62 4 263 753 186381750 186381261 2.640000e-144 523.0
29 TraesCS5A01G106000 chr5B 96.838 253 6 1 3909 4161 185724567 185724317 9.900000e-114 422.0
30 TraesCS5A01G106000 chr5B 95.000 60 3 0 3878 3937 185724567 185724508 2.450000e-15 95.3
31 TraesCS5A01G106000 chr5B 97.826 46 1 0 5805 5850 185722543 185722498 6.870000e-11 80.5
32 TraesCS5A01G106000 chr5B 100.000 28 0 0 344 371 477421150 477421123 1.500000e-02 52.8
33 TraesCS5A01G106000 chr5D 97.120 2326 50 8 731 3042 137059304 137056982 0.000000e+00 3908.0
34 TraesCS5A01G106000 chr5D 94.418 1451 56 12 6350 7792 137054087 137052654 0.000000e+00 2207.0
35 TraesCS5A01G106000 chr5D 88.874 728 38 16 3204 3906 137056987 137056278 0.000000e+00 856.0
36 TraesCS5A01G106000 chr5D 90.968 620 33 6 4183 4795 137055965 137055362 0.000000e+00 813.0
37 TraesCS5A01G106000 chr5D 93.200 500 33 1 5851 6349 137054631 137054132 0.000000e+00 734.0
38 TraesCS5A01G106000 chr5D 89.228 492 45 5 266 753 137061742 137061255 7.080000e-170 608.0
39 TraesCS5A01G106000 chr5D 95.938 320 13 0 4775 5094 137055354 137055035 3.410000e-143 520.0
40 TraesCS5A01G106000 chr5D 88.785 321 24 7 7935 8253 137042523 137042213 4.670000e-102 383.0
41 TraesCS5A01G106000 chr5D 94.071 253 10 3 3909 4161 137056337 137056090 6.050000e-101 379.0
42 TraesCS5A01G106000 chr5D 92.857 112 8 0 7804 7915 137042934 137042823 6.630000e-36 163.0
43 TraesCS5A01G106000 chr5D 90.400 125 7 4 5178 5302 137054930 137054811 8.570000e-35 159.0
44 TraesCS5A01G106000 chr5D 87.402 127 13 3 3039 3162 276547637 276547763 8.630000e-30 143.0
45 TraesCS5A01G106000 chr5D 90.000 110 8 2 3039 3146 488352507 488352399 1.120000e-28 139.0
46 TraesCS5A01G106000 chr5D 93.902 82 5 0 5769 5850 137054561 137054480 3.130000e-24 124.0
47 TraesCS5A01G106000 chr5D 93.103 29 2 0 3909 3937 137056306 137056278 9.000000e+00 43.6
48 TraesCS5A01G106000 chr7A 86.689 601 63 13 4629 5226 422654182 422653596 0.000000e+00 651.0
49 TraesCS5A01G106000 chr7A 97.004 267 5 2 1 266 183935863 183936127 5.880000e-121 446.0
50 TraesCS5A01G106000 chr7A 86.822 129 12 2 3039 3162 539543833 539543705 1.120000e-28 139.0
51 TraesCS5A01G106000 chr7A 85.827 127 15 3 3039 3162 381242901 381242775 1.870000e-26 132.0
52 TraesCS5A01G106000 chr7A 77.348 181 39 2 548 727 193612794 193612973 1.130000e-18 106.0
53 TraesCS5A01G106000 chr7D 86.023 601 64 16 4629 5225 376066859 376066275 1.960000e-175 627.0
54 TraesCS5A01G106000 chr7D 91.150 113 8 2 3037 3147 194482100 194481988 1.430000e-32 152.0
55 TraesCS5A01G106000 chr7B 85.880 602 63 17 4629 5226 371029946 371029363 9.100000e-174 621.0
56 TraesCS5A01G106000 chr7B 83.007 153 20 3 4329 4478 244402900 244403049 5.200000e-27 134.0
57 TraesCS5A01G106000 chr7B 78.814 118 20 5 613 727 144069739 144069854 3.190000e-09 75.0
58 TraesCS5A01G106000 chr2D 88.976 381 24 13 4787 5166 416403641 416404004 9.760000e-124 455.0
59 TraesCS5A01G106000 chr4A 96.992 266 6 1 1 266 241320686 241320949 5.880000e-121 446.0
60 TraesCS5A01G106000 chr4A 96.617 266 7 1 1 266 142425279 142425542 2.730000e-119 440.0
61 TraesCS5A01G106000 chr3A 96.617 266 7 1 1 266 273501739 273502002 2.730000e-119 440.0
62 TraesCS5A01G106000 chr1A 96.617 266 7 1 1 266 403499413 403499676 2.730000e-119 440.0
63 TraesCS5A01G106000 chr1A 96.269 268 8 1 1 268 403507204 403507469 9.830000e-119 438.0
64 TraesCS5A01G106000 chr1A 88.889 117 10 2 3033 3147 521852932 521853047 3.110000e-29 141.0
65 TraesCS5A01G106000 chr2A 87.927 381 28 13 4787 5166 582640546 582640909 4.580000e-117 433.0
66 TraesCS5A01G106000 chr2A 89.744 117 8 4 3033 3146 218122241 218122356 6.670000e-31 147.0
67 TraesCS5A01G106000 chr1D 88.219 365 32 6 4501 4862 263873898 263873542 7.660000e-115 425.0
68 TraesCS5A01G106000 chr1D 87.692 130 11 4 3038 3162 465126594 465126465 6.670000e-31 147.0
69 TraesCS5A01G106000 chr1D 83.333 96 7 6 8109 8204 20835211 20835297 6.870000e-11 80.5
70 TraesCS5A01G106000 chr3D 86.402 353 39 7 4501 4850 27665761 27665415 2.170000e-100 377.0
71 TraesCS5A01G106000 chr3D 89.552 67 4 3 662 727 591861415 591861479 1.910000e-11 82.4
72 TraesCS5A01G106000 chr1B 79.330 358 40 15 4881 5225 132063981 132063645 3.880000e-53 220.0
73 TraesCS5A01G106000 chr1B 88.679 53 5 1 8152 8204 73041685 73041736 6.920000e-06 63.9
74 TraesCS5A01G106000 chr4B 83.007 153 20 3 4329 4478 240104220 240104369 5.200000e-27 134.0
75 TraesCS5A01G106000 chr3B 83.333 150 19 3 4332 4478 126480541 126480687 5.200000e-27 134.0
76 TraesCS5A01G106000 chr2B 83.673 147 18 3 4335 4478 45692134 45691991 5.200000e-27 134.0
77 TraesCS5A01G106000 chr2B 96.970 33 1 0 5256 5288 718650018 718650050 1.000000e-03 56.5
78 TraesCS5A01G106000 chr6B 92.593 54 2 2 674 726 125404235 125404287 8.880000e-10 76.8
79 TraesCS5A01G106000 chr6B 72.766 235 53 10 497 726 554122002 554122230 1.490000e-07 69.4
80 TraesCS5A01G106000 chr6B 88.679 53 5 1 8152 8204 543728501 543728450 6.920000e-06 63.9
81 TraesCS5A01G106000 chr6A 75.155 161 37 3 569 727 12292019 12292178 1.150000e-08 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G106000 chr5A 172460290 172468542 8252 False 1895.075000 9793 97.832000 1 8253 8 chr5A.!!$F5 8252
1 TraesCS5A01G106000 chr5A 172508931 172509538 607 False 1074.000000 1074 98.520000 4335 4942 1 chr5A.!!$F2 607
2 TraesCS5A01G106000 chr5A 172517875 172520636 2761 False 869.800000 2850 96.414000 5100 8253 5 chr5A.!!$F6 3153
3 TraesCS5A01G106000 chr5A 172582323 172583722 1399 False 735.333333 1605 97.302667 4335 6117 3 chr5A.!!$F7 1782
4 TraesCS5A01G106000 chr5B 185720278 185727681 7403 True 1155.200000 5168 94.391111 759 8175 9 chr5B.!!$R3 7416
5 TraesCS5A01G106000 chr5D 137052654 137061742 9088 True 941.054545 3908 92.838364 266 7792 11 chr5D.!!$R3 7526
6 TraesCS5A01G106000 chr5D 137042213 137042934 721 True 273.000000 383 90.821000 7804 8253 2 chr5D.!!$R2 449
7 TraesCS5A01G106000 chr7A 422653596 422654182 586 True 651.000000 651 86.689000 4629 5226 1 chr7A.!!$R2 597
8 TraesCS5A01G106000 chr7D 376066275 376066859 584 True 627.000000 627 86.023000 4629 5225 1 chr7D.!!$R2 596
9 TraesCS5A01G106000 chr7B 371029363 371029946 583 True 621.000000 621 85.880000 4629 5226 1 chr7B.!!$R1 597

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
465 469 0.030369 AGCGAAGTTTCTCGTCGTGT 59.970 50.0 5.33 0.00 46.43 4.49 F
543 547 0.253630 TTCCTGGTCCTTAGGGCCAT 60.254 55.0 26.24 0.00 37.85 4.40 F
594 598 0.679505 CAAGGTCCAACCGACTCTGA 59.320 55.0 0.00 0.00 44.90 3.27 F
1773 3758 0.908198 AGATGGAGCGAAAGAAGGCT 59.092 50.0 0.00 0.00 43.42 4.58 F
2563 4551 0.592637 CACATCAGCAAGCGTTGGAA 59.407 50.0 0.00 0.00 0.00 3.53 F
3202 5215 1.216990 CCCTAGGCAGACCCTTGATT 58.783 55.0 2.05 0.00 43.06 2.57 F
4161 6206 1.380403 TTCACCGTGGCTGTGGTTTG 61.380 55.0 0.00 0.00 35.96 2.93 F
4166 6211 0.040425 CGTGGCTGTGGTTTGTAAGC 60.040 55.0 0.00 0.00 34.86 3.09 F
4174 6219 0.179015 TGGTTTGTAAGCCGAGGCAA 60.179 50.0 17.18 0.71 44.88 4.52 F
5826 8120 0.250124 TGTTTGGCCTACAGACGTGG 60.250 55.0 3.32 0.00 37.01 4.94 F
5844 8138 0.180406 GGCATGTTGACGGTCCCTAT 59.820 55.0 5.55 0.00 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2238 4226 0.108585 ACATCGCCTCCAACACACTT 59.891 50.000 0.00 0.0 0.00 3.16 R
2541 4529 2.969806 AACGCTTGCTGATGTGCCG 61.970 57.895 0.00 0.0 0.00 5.69 R
2563 4551 2.614057 CAGTCTTTTCGTTCTGTTGGCT 59.386 45.455 0.00 0.0 0.00 4.75 R
3499 5514 0.108615 CACTGTACTCCCGGCAGAAG 60.109 60.000 12.31 3.4 34.60 2.85 R
4147 6192 0.040425 GCTTACAAACCACAGCCACG 60.040 55.000 0.00 0.0 0.00 4.94 R
4164 6209 3.788227 TGGAAATATATTGCCTCGGCT 57.212 42.857 21.19 0.0 42.51 5.52 R
5825 8119 0.180406 ATAGGGACCGTCAACATGCC 59.820 55.000 0.00 0.0 0.00 4.40 R
5833 8127 0.249363 GGCTTTCGATAGGGACCGTC 60.249 60.000 5.00 0.0 0.00 4.79 R
5835 8129 0.464452 AAGGCTTTCGATAGGGACCG 59.536 55.000 5.00 0.0 0.00 4.79 R
7057 9472 4.281435 TCCACATGTTTCACAATCATTGCT 59.719 37.500 0.00 0.0 0.00 3.91 R
7651 10077 5.491973 TCAGTTTGTTACGCTACGTTTTTC 58.508 37.500 0.00 0.0 41.54 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 5.923733 ATAGCTTCACTAATATCGGGAGG 57.076 43.478 0.00 0.00 33.57 4.30
53 54 3.845860 AGCTTCACTAATATCGGGAGGA 58.154 45.455 0.00 0.00 0.00 3.71
54 55 4.421131 AGCTTCACTAATATCGGGAGGAT 58.579 43.478 0.00 0.00 39.25 3.24
55 56 5.580998 AGCTTCACTAATATCGGGAGGATA 58.419 41.667 0.00 0.00 41.71 2.59
57 58 7.355101 AGCTTCACTAATATCGGGAGGATATA 58.645 38.462 0.00 0.00 45.53 0.86
58 59 8.007742 AGCTTCACTAATATCGGGAGGATATAT 58.992 37.037 0.00 0.00 45.53 0.86
59 60 8.643324 GCTTCACTAATATCGGGAGGATATATT 58.357 37.037 0.00 0.00 45.53 1.28
71 72 9.992442 TCGGGAGGATATATTATAAAGAGAAGT 57.008 33.333 0.00 0.00 0.00 3.01
87 88 3.828875 GAAGTCATCCTTCCCTCGATT 57.171 47.619 0.00 0.00 43.25 3.34
88 89 4.143986 GAAGTCATCCTTCCCTCGATTT 57.856 45.455 0.00 0.00 43.25 2.17
89 90 5.277857 GAAGTCATCCTTCCCTCGATTTA 57.722 43.478 0.00 0.00 43.25 1.40
90 91 5.671493 GAAGTCATCCTTCCCTCGATTTAA 58.329 41.667 0.00 0.00 43.25 1.52
91 92 5.693769 AGTCATCCTTCCCTCGATTTAAA 57.306 39.130 0.00 0.00 0.00 1.52
92 93 6.253946 AGTCATCCTTCCCTCGATTTAAAT 57.746 37.500 0.00 0.00 0.00 1.40
93 94 6.058183 AGTCATCCTTCCCTCGATTTAAATG 58.942 40.000 5.17 0.00 0.00 2.32
94 95 5.239525 GTCATCCTTCCCTCGATTTAAATGG 59.760 44.000 5.17 4.49 0.00 3.16
95 96 5.131977 TCATCCTTCCCTCGATTTAAATGGA 59.868 40.000 5.17 9.07 0.00 3.41
96 97 5.646692 TCCTTCCCTCGATTTAAATGGAT 57.353 39.130 12.58 0.00 0.00 3.41
97 98 5.621193 TCCTTCCCTCGATTTAAATGGATC 58.379 41.667 12.58 0.00 0.00 3.36
98 99 4.452455 CCTTCCCTCGATTTAAATGGATCG 59.548 45.833 12.58 7.80 44.76 3.69
114 115 5.468540 TGGATCGAAGATCCATACGATTT 57.531 39.130 23.43 0.00 45.12 2.17
115 116 6.584185 TGGATCGAAGATCCATACGATTTA 57.416 37.500 23.43 2.50 45.12 1.40
116 117 7.170393 TGGATCGAAGATCCATACGATTTAT 57.830 36.000 23.43 0.00 45.12 1.40
117 118 7.611770 TGGATCGAAGATCCATACGATTTATT 58.388 34.615 23.43 0.00 45.12 1.40
118 119 8.094548 TGGATCGAAGATCCATACGATTTATTT 58.905 33.333 23.43 0.00 45.12 1.40
119 120 9.582431 GGATCGAAGATCCATACGATTTATTTA 57.418 33.333 20.66 0.00 45.12 1.40
122 123 9.976511 TCGAAGATCCATACGATTTATTTAGTT 57.023 29.630 0.00 0.00 0.00 2.24
129 130 8.988934 TCCATACGATTTATTTAGTTGAGATGC 58.011 33.333 0.00 0.00 0.00 3.91
130 131 8.773645 CCATACGATTTATTTAGTTGAGATGCA 58.226 33.333 0.00 0.00 0.00 3.96
134 135 9.559958 ACGATTTATTTAGTTGAGATGCAAAAG 57.440 29.630 0.00 0.00 38.44 2.27
135 136 9.773328 CGATTTATTTAGTTGAGATGCAAAAGA 57.227 29.630 0.00 0.00 38.44 2.52
144 145 8.571461 AGTTGAGATGCAAAAGATTTATGAGA 57.429 30.769 0.00 0.00 38.44 3.27
145 146 9.186837 AGTTGAGATGCAAAAGATTTATGAGAT 57.813 29.630 0.00 0.00 38.44 2.75
146 147 9.234384 GTTGAGATGCAAAAGATTTATGAGATG 57.766 33.333 0.00 0.00 38.44 2.90
147 148 8.741603 TGAGATGCAAAAGATTTATGAGATGA 57.258 30.769 0.00 0.00 0.00 2.92
148 149 9.350951 TGAGATGCAAAAGATTTATGAGATGAT 57.649 29.630 0.00 0.00 0.00 2.45
149 150 9.613957 GAGATGCAAAAGATTTATGAGATGATG 57.386 33.333 0.00 0.00 0.00 3.07
150 151 8.577296 AGATGCAAAAGATTTATGAGATGATGG 58.423 33.333 0.00 0.00 0.00 3.51
151 152 6.509656 TGCAAAAGATTTATGAGATGATGGC 58.490 36.000 0.00 0.00 0.00 4.40
152 153 6.097129 TGCAAAAGATTTATGAGATGATGGCA 59.903 34.615 0.00 0.00 0.00 4.92
153 154 7.152645 GCAAAAGATTTATGAGATGATGGCAT 58.847 34.615 0.00 0.00 37.47 4.40
154 155 7.116376 GCAAAAGATTTATGAGATGATGGCATG 59.884 37.037 3.81 0.00 34.11 4.06
155 156 8.357402 CAAAAGATTTATGAGATGATGGCATGA 58.643 33.333 3.81 0.00 34.11 3.07
156 157 8.651589 AAAGATTTATGAGATGATGGCATGAT 57.348 30.769 3.81 0.13 34.11 2.45
157 158 7.631717 AGATTTATGAGATGATGGCATGATG 57.368 36.000 3.81 0.00 34.11 3.07
158 159 7.402862 AGATTTATGAGATGATGGCATGATGA 58.597 34.615 3.81 0.00 34.11 2.92
159 160 6.812879 TTTATGAGATGATGGCATGATGAC 57.187 37.500 3.81 0.00 34.11 3.06
160 161 3.849563 TGAGATGATGGCATGATGACA 57.150 42.857 2.18 2.18 41.29 3.58
167 168 2.593026 ATGGCATGATGACATGATGCA 58.407 42.857 31.93 21.63 46.11 3.96
168 169 2.962421 ATGGCATGATGACATGATGCAA 59.038 40.909 31.93 25.60 46.11 4.08
169 170 3.578282 ATGGCATGATGACATGATGCAAT 59.422 39.130 31.93 26.49 46.11 3.56
170 171 4.561326 ATGGCATGATGACATGATGCAATG 60.561 41.667 31.93 11.07 46.11 2.82
173 174 4.664150 ATGATGACATGATGCAATGCAA 57.336 36.364 13.45 0.00 37.45 4.08
174 175 4.457834 TGATGACATGATGCAATGCAAA 57.542 36.364 13.45 3.94 43.62 3.68
175 176 4.822026 TGATGACATGATGCAATGCAAAA 58.178 34.783 13.45 3.51 43.62 2.44
176 177 5.238583 TGATGACATGATGCAATGCAAAAA 58.761 33.333 13.45 0.59 43.62 1.94
199 200 7.565323 AAAATAAAAAGGCAAGCACAAATGA 57.435 28.000 0.00 0.00 0.00 2.57
200 201 7.565323 AAATAAAAAGGCAAGCACAAATGAA 57.435 28.000 0.00 0.00 0.00 2.57
201 202 7.565323 AATAAAAAGGCAAGCACAAATGAAA 57.435 28.000 0.00 0.00 0.00 2.69
202 203 4.880886 AAAAGGCAAGCACAAATGAAAC 57.119 36.364 0.00 0.00 0.00 2.78
203 204 3.540314 AAGGCAAGCACAAATGAAACA 57.460 38.095 0.00 0.00 0.00 2.83
204 205 3.756933 AGGCAAGCACAAATGAAACAT 57.243 38.095 0.00 0.00 0.00 2.71
205 206 4.870123 AGGCAAGCACAAATGAAACATA 57.130 36.364 0.00 0.00 0.00 2.29
206 207 4.559153 AGGCAAGCACAAATGAAACATAC 58.441 39.130 0.00 0.00 0.00 2.39
207 208 3.364621 GGCAAGCACAAATGAAACATACG 59.635 43.478 0.00 0.00 0.00 3.06
208 209 3.364621 GCAAGCACAAATGAAACATACGG 59.635 43.478 0.00 0.00 0.00 4.02
209 210 3.216147 AGCACAAATGAAACATACGGC 57.784 42.857 0.00 0.00 0.00 5.68
210 211 1.910819 GCACAAATGAAACATACGGCG 59.089 47.619 4.80 4.80 0.00 6.46
211 212 2.413502 GCACAAATGAAACATACGGCGA 60.414 45.455 16.62 0.00 0.00 5.54
212 213 3.816091 CACAAATGAAACATACGGCGAA 58.184 40.909 16.62 0.00 0.00 4.70
213 214 4.222886 CACAAATGAAACATACGGCGAAA 58.777 39.130 16.62 0.38 0.00 3.46
214 215 4.087930 CACAAATGAAACATACGGCGAAAC 59.912 41.667 16.62 0.00 0.00 2.78
215 216 3.481112 AATGAAACATACGGCGAAACC 57.519 42.857 16.62 0.00 0.00 3.27
216 217 1.158434 TGAAACATACGGCGAAACCC 58.842 50.000 16.62 0.00 33.26 4.11
223 224 4.449391 CGGCGAAACCCGGAATAT 57.551 55.556 0.73 0.00 44.46 1.28
224 225 3.591979 CGGCGAAACCCGGAATATA 57.408 52.632 0.73 0.00 44.46 0.86
225 226 1.868469 CGGCGAAACCCGGAATATAA 58.132 50.000 0.73 0.00 44.46 0.98
226 227 1.796459 CGGCGAAACCCGGAATATAAG 59.204 52.381 0.73 0.00 44.46 1.73
227 228 2.148768 GGCGAAACCCGGAATATAAGG 58.851 52.381 0.73 0.00 39.04 2.69
228 229 2.224354 GGCGAAACCCGGAATATAAGGA 60.224 50.000 0.73 0.00 39.04 3.36
229 230 3.469739 GCGAAACCCGGAATATAAGGAA 58.530 45.455 0.73 0.00 39.04 3.36
230 231 3.497262 GCGAAACCCGGAATATAAGGAAG 59.503 47.826 0.73 0.00 39.04 3.46
231 232 3.497262 CGAAACCCGGAATATAAGGAAGC 59.503 47.826 0.73 0.00 33.91 3.86
232 233 3.503800 AACCCGGAATATAAGGAAGCC 57.496 47.619 0.73 0.00 0.00 4.35
233 234 2.702748 ACCCGGAATATAAGGAAGCCT 58.297 47.619 0.73 0.00 33.87 4.58
234 235 3.053826 ACCCGGAATATAAGGAAGCCTT 58.946 45.455 0.73 3.94 46.63 4.35
235 236 3.072622 ACCCGGAATATAAGGAAGCCTTC 59.927 47.826 0.73 0.00 43.57 3.46
236 237 3.328050 CCCGGAATATAAGGAAGCCTTCT 59.672 47.826 0.73 0.00 43.57 2.85
237 238 4.563786 CCCGGAATATAAGGAAGCCTTCTC 60.564 50.000 0.73 0.00 43.57 2.87
238 239 4.238514 CGGAATATAAGGAAGCCTTCTCG 58.761 47.826 4.15 0.00 43.57 4.04
239 240 4.022242 CGGAATATAAGGAAGCCTTCTCGA 60.022 45.833 4.15 0.00 43.57 4.04
240 241 5.474825 GGAATATAAGGAAGCCTTCTCGAG 58.525 45.833 5.93 5.93 43.57 4.04
241 242 2.900716 ATAAGGAAGCCTTCTCGAGC 57.099 50.000 7.81 0.00 43.57 5.03
242 243 1.557099 TAAGGAAGCCTTCTCGAGCA 58.443 50.000 7.81 0.00 43.57 4.26
243 244 0.908198 AAGGAAGCCTTCTCGAGCAT 59.092 50.000 7.81 0.00 40.17 3.79
244 245 0.463620 AGGAAGCCTTCTCGAGCATC 59.536 55.000 7.81 0.00 0.00 3.91
255 256 4.593864 GAGCATCGGTCTCGGGGC 62.594 72.222 0.00 0.00 36.95 5.80
258 259 4.570663 CATCGGTCTCGGGGCGTC 62.571 72.222 0.00 0.00 36.95 5.19
262 263 3.998672 GGTCTCGGGGCGTCACAA 61.999 66.667 0.00 0.00 0.00 3.33
263 264 2.737376 GTCTCGGGGCGTCACAAC 60.737 66.667 0.00 0.00 0.00 3.32
264 265 3.228017 TCTCGGGGCGTCACAACA 61.228 61.111 0.00 0.00 0.00 3.33
276 277 3.858877 GCGTCACAACACATCTCTCTCTT 60.859 47.826 0.00 0.00 0.00 2.85
279 280 3.259374 TCACAACACATCTCTCTCTTCCC 59.741 47.826 0.00 0.00 0.00 3.97
300 301 1.207329 CCTCCGGCTAGCAGTTTAGTT 59.793 52.381 18.24 0.00 0.00 2.24
315 316 7.388224 AGCAGTTTAGTTAGAGCCTTTTAGTTC 59.612 37.037 0.00 0.00 0.00 3.01
317 318 8.713271 CAGTTTAGTTAGAGCCTTTTAGTTCTG 58.287 37.037 0.00 0.00 0.00 3.02
329 330 3.586470 TTAGTTCTGGCAAGGTTGGAA 57.414 42.857 0.00 0.00 0.00 3.53
345 346 0.249489 GGAACTCGGATGGACGATGG 60.249 60.000 0.00 0.00 42.62 3.51
371 372 4.982241 TCATCTTTGAGTTGGTCTTCCT 57.018 40.909 0.00 0.00 34.23 3.36
377 378 4.503714 TTGAGTTGGTCTTCCTGACTTT 57.496 40.909 0.00 0.00 44.74 2.66
378 379 3.808728 TGAGTTGGTCTTCCTGACTTTG 58.191 45.455 0.00 0.00 44.74 2.77
384 385 4.899502 TGGTCTTCCTGACTTTGATTCTC 58.100 43.478 0.00 0.00 44.74 2.87
385 386 4.347876 TGGTCTTCCTGACTTTGATTCTCA 59.652 41.667 0.00 0.00 44.74 3.27
386 387 4.693095 GGTCTTCCTGACTTTGATTCTCAC 59.307 45.833 0.00 0.00 44.74 3.51
388 389 4.594920 TCTTCCTGACTTTGATTCTCACCT 59.405 41.667 0.00 0.00 0.00 4.00
399 400 5.661056 TGATTCTCACCTAATTCGTCTGT 57.339 39.130 0.00 0.00 0.00 3.41
400 401 6.037786 TGATTCTCACCTAATTCGTCTGTT 57.962 37.500 0.00 0.00 0.00 3.16
408 412 6.014840 TCACCTAATTCGTCTGTTAGGAAGTT 60.015 38.462 15.85 0.00 46.40 2.66
421 425 3.064900 AGGAAGTTGATGGAACTCTGC 57.935 47.619 0.00 0.00 44.68 4.26
438 442 5.999044 ACTCTGCCATAGATTCATGTCTTT 58.001 37.500 0.00 0.00 34.21 2.52
444 448 7.765307 TGCCATAGATTCATGTCTTTTTCTTC 58.235 34.615 0.00 0.00 0.00 2.87
465 469 0.030369 AGCGAAGTTTCTCGTCGTGT 59.970 50.000 5.33 0.00 46.43 4.49
467 471 1.474017 CGAAGTTTCTCGTCGTGTGT 58.526 50.000 0.00 0.00 41.59 3.72
470 474 2.121116 AGTTTCTCGTCGTGTGTCAG 57.879 50.000 0.00 0.00 0.00 3.51
478 482 1.467342 CGTCGTGTGTCAGATCTGGTA 59.533 52.381 22.42 9.13 0.00 3.25
480 484 1.816835 TCGTGTGTCAGATCTGGTACC 59.183 52.381 22.42 4.43 0.00 3.34
491 495 1.195115 TCTGGTACCAGATGCTCCAC 58.805 55.000 35.91 0.00 46.80 4.02
542 546 1.162329 TTCCTGGTCCTTAGGGCCA 59.838 57.895 24.49 24.49 37.29 5.36
543 547 0.253630 TTCCTGGTCCTTAGGGCCAT 60.254 55.000 26.24 0.00 37.85 4.40
587 591 1.535462 GTCATCAACAAGGTCCAACCG 59.465 52.381 0.00 0.00 44.90 4.44
594 598 0.679505 CAAGGTCCAACCGACTCTGA 59.320 55.000 0.00 0.00 44.90 3.27
632 636 1.885388 TGTGTCGGTGGCTTGTTCG 60.885 57.895 0.00 0.00 0.00 3.95
648 652 1.895020 TTCGGGCAGCGATAGTGGTT 61.895 55.000 0.00 0.00 39.35 3.67
649 653 2.173669 CGGGCAGCGATAGTGGTTG 61.174 63.158 0.00 0.00 39.35 3.77
653 657 1.438651 GCAGCGATAGTGGTTGTTCA 58.561 50.000 0.00 0.00 39.35 3.18
670 674 6.994496 GGTTGTTCAATGATCCAGATATCTCA 59.006 38.462 1.03 0.00 0.00 3.27
729 733 6.930667 TTCGGTGAACTTTTATAATAGGCC 57.069 37.500 0.00 0.00 0.00 5.19
730 734 5.370679 TCGGTGAACTTTTATAATAGGCCC 58.629 41.667 0.00 1.80 0.00 5.80
731 735 4.517832 CGGTGAACTTTTATAATAGGCCCC 59.482 45.833 0.00 0.55 0.00 5.80
782 2756 5.886960 ACAATTCAGACTGGCAGTTTATC 57.113 39.130 22.98 8.86 0.00 1.75
883 2858 9.745880 CAACTCAGTACTCTAAAAGAACAGTTA 57.254 33.333 0.00 0.00 0.00 2.24
888 2863 9.063739 CAGTACTCTAAAAGAACAGTTATCGTC 57.936 37.037 0.00 0.00 0.00 4.20
980 2959 1.082679 GCCTCGAAAACCCTAGCGTC 61.083 60.000 0.00 0.00 0.00 5.19
1341 3326 4.724262 GCCTTTTCCGGCTTCTCT 57.276 55.556 0.00 0.00 46.63 3.10
1447 3432 1.050988 CATCCCCACCGACTCCATCT 61.051 60.000 0.00 0.00 0.00 2.90
1773 3758 0.908198 AGATGGAGCGAAAGAAGGCT 59.092 50.000 0.00 0.00 43.42 4.58
1911 3896 2.016905 AGGAGGAGCTGTACTGTGTT 57.983 50.000 0.00 0.00 0.00 3.32
2085 4073 1.804748 GTTGATGTGGGGTTCGACTTC 59.195 52.381 0.00 0.00 0.00 3.01
2176 4164 2.825836 GCTTGGAGGTGGCGGATG 60.826 66.667 0.00 0.00 0.00 3.51
2238 4226 5.396772 GGAGGTTGGTTCATATGATGAGACA 60.397 44.000 6.17 0.00 40.94 3.41
2455 4443 8.491045 TGATAGTGGACATGGTATGAAGAATA 57.509 34.615 0.00 0.00 0.00 1.75
2527 4515 4.974438 AGGCGGAAGGTCCACCCA 62.974 66.667 0.00 0.00 39.59 4.51
2541 4529 4.192317 GTCCACCCACTTCTAATGATGAC 58.808 47.826 0.00 0.00 0.00 3.06
2563 4551 0.592637 CACATCAGCAAGCGTTGGAA 59.407 50.000 0.00 0.00 0.00 3.53
2656 4644 4.423625 ACTGTTTCTGCTGACCTAAAGT 57.576 40.909 0.00 0.00 0.00 2.66
2707 4695 9.476202 AGGTAAATTTACAATTGTGCTCTTTTC 57.524 29.630 25.59 11.77 35.37 2.29
2807 4795 4.201685 CCTGTAATGTTGTTTCGATCCGAC 60.202 45.833 0.00 0.00 34.89 4.79
2910 4898 9.069082 CCCGTATAATTTCCAATGGTTGTATTA 57.931 33.333 0.00 0.61 0.00 0.98
2937 4925 3.935828 GAGCAGATAGGGTGTCTTTTGTC 59.064 47.826 0.00 0.00 0.00 3.18
3118 5108 7.447374 TGTCATTGATTTTACGTGGAGATTT 57.553 32.000 0.00 0.00 0.00 2.17
3201 5214 2.936823 CCCTAGGCAGACCCTTGAT 58.063 57.895 2.05 0.00 43.06 2.57
3202 5215 1.216990 CCCTAGGCAGACCCTTGATT 58.783 55.000 2.05 0.00 43.06 2.57
3242 5255 7.148641 ACATAGTTTCCTAATCTCGTGCTATG 58.851 38.462 0.00 0.00 39.15 2.23
3400 5413 9.566331 TGATAGGAAGGGAAATATGATGATAGT 57.434 33.333 0.00 0.00 0.00 2.12
3437 5450 4.034858 GTGTATGGTGATTGAGCATGTGAG 59.965 45.833 0.00 0.00 42.87 3.51
3791 5820 8.189119 TGCTTTCATACTTGGGAAAATAAAGT 57.811 30.769 0.00 0.00 37.82 2.66
3858 5903 5.916661 ATACGAGTTAGTCAGTTCCATGT 57.083 39.130 0.00 0.00 0.00 3.21
3859 5904 4.175787 ACGAGTTAGTCAGTTCCATGTC 57.824 45.455 0.00 0.00 0.00 3.06
3860 5905 3.572682 ACGAGTTAGTCAGTTCCATGTCA 59.427 43.478 0.00 0.00 0.00 3.58
3861 5906 4.038763 ACGAGTTAGTCAGTTCCATGTCAA 59.961 41.667 0.00 0.00 0.00 3.18
3862 5907 5.171476 CGAGTTAGTCAGTTCCATGTCAAT 58.829 41.667 0.00 0.00 0.00 2.57
3863 5908 5.639506 CGAGTTAGTCAGTTCCATGTCAATT 59.360 40.000 0.00 0.00 0.00 2.32
3864 5909 6.401474 CGAGTTAGTCAGTTCCATGTCAATTG 60.401 42.308 0.00 0.00 0.00 2.32
3865 5910 5.182001 AGTTAGTCAGTTCCATGTCAATTGC 59.818 40.000 0.00 0.00 0.00 3.56
3866 5911 2.821969 AGTCAGTTCCATGTCAATTGCC 59.178 45.455 0.00 0.00 0.00 4.52
3867 5912 2.557924 GTCAGTTCCATGTCAATTGCCA 59.442 45.455 0.00 0.00 0.00 4.92
3868 5913 3.194116 GTCAGTTCCATGTCAATTGCCAT 59.806 43.478 0.00 0.00 0.00 4.40
3869 5914 4.398988 GTCAGTTCCATGTCAATTGCCATA 59.601 41.667 0.92 0.00 0.00 2.74
3870 5915 5.068198 GTCAGTTCCATGTCAATTGCCATAT 59.932 40.000 0.92 0.00 0.00 1.78
3871 5916 5.068067 TCAGTTCCATGTCAATTGCCATATG 59.932 40.000 0.92 0.00 0.00 1.78
3872 5917 5.068067 CAGTTCCATGTCAATTGCCATATGA 59.932 40.000 0.92 0.00 0.00 2.15
3873 5918 5.836898 AGTTCCATGTCAATTGCCATATGAT 59.163 36.000 0.92 0.00 0.00 2.45
3874 5919 5.715434 TCCATGTCAATTGCCATATGATG 57.285 39.130 0.92 0.00 0.00 3.07
3875 5920 5.386924 TCCATGTCAATTGCCATATGATGA 58.613 37.500 0.92 0.00 0.00 2.92
3876 5921 6.014012 TCCATGTCAATTGCCATATGATGAT 58.986 36.000 0.92 0.00 0.00 2.45
3877 5922 6.071616 TCCATGTCAATTGCCATATGATGATG 60.072 38.462 0.92 0.00 0.00 3.07
3878 5923 6.295067 CCATGTCAATTGCCATATGATGATGT 60.295 38.462 0.92 0.00 0.00 3.06
3879 5924 6.321848 TGTCAATTGCCATATGATGATGTC 57.678 37.500 3.65 0.00 0.00 3.06
3880 5925 5.828859 TGTCAATTGCCATATGATGATGTCA 59.171 36.000 3.65 0.00 42.06 3.58
3881 5926 6.016610 TGTCAATTGCCATATGATGATGTCAG 60.017 38.462 3.65 0.00 40.92 3.51
3882 5927 6.016527 GTCAATTGCCATATGATGATGTCAGT 60.017 38.462 3.65 0.00 40.92 3.41
3883 5928 6.548251 TCAATTGCCATATGATGATGTCAGTT 59.452 34.615 3.65 0.00 40.92 3.16
3884 5929 6.570672 ATTGCCATATGATGATGTCAGTTC 57.429 37.500 3.65 0.00 40.92 3.01
3885 5930 4.392047 TGCCATATGATGATGTCAGTTCC 58.608 43.478 3.65 0.00 40.92 3.62
3886 5931 4.141436 TGCCATATGATGATGTCAGTTCCA 60.141 41.667 3.65 0.00 40.92 3.53
3887 5932 5.008331 GCCATATGATGATGTCAGTTCCAT 58.992 41.667 3.65 0.00 40.92 3.41
3888 5933 5.106277 GCCATATGATGATGTCAGTTCCATG 60.106 44.000 3.65 0.00 40.92 3.66
3889 5934 6.002082 CCATATGATGATGTCAGTTCCATGT 58.998 40.000 3.65 0.00 40.92 3.21
3890 5935 6.148976 CCATATGATGATGTCAGTTCCATGTC 59.851 42.308 3.65 0.00 40.92 3.06
3891 5936 4.556592 TGATGATGTCAGTTCCATGTCA 57.443 40.909 0.00 0.00 31.80 3.58
3892 5937 4.909001 TGATGATGTCAGTTCCATGTCAA 58.091 39.130 0.00 0.00 31.80 3.18
3893 5938 5.503002 TGATGATGTCAGTTCCATGTCAAT 58.497 37.500 0.00 0.00 31.80 2.57
3894 5939 5.947566 TGATGATGTCAGTTCCATGTCAATT 59.052 36.000 0.00 0.00 31.80 2.32
3895 5940 5.632244 TGATGTCAGTTCCATGTCAATTG 57.368 39.130 0.00 0.00 0.00 2.32
3896 5941 3.921119 TGTCAGTTCCATGTCAATTGC 57.079 42.857 0.00 0.00 0.00 3.56
3897 5942 2.557924 TGTCAGTTCCATGTCAATTGCC 59.442 45.455 0.00 0.00 0.00 4.52
3898 5943 2.557924 GTCAGTTCCATGTCAATTGCCA 59.442 45.455 0.00 0.00 0.00 4.92
3899 5944 3.194116 GTCAGTTCCATGTCAATTGCCAT 59.806 43.478 0.00 0.00 0.00 4.40
3900 5945 4.398988 GTCAGTTCCATGTCAATTGCCATA 59.601 41.667 0.92 0.00 0.00 2.74
3901 5946 5.068198 GTCAGTTCCATGTCAATTGCCATAT 59.932 40.000 0.92 0.00 0.00 1.78
3902 5947 5.068067 TCAGTTCCATGTCAATTGCCATATG 59.932 40.000 0.92 0.00 0.00 1.78
3903 5948 5.068067 CAGTTCCATGTCAATTGCCATATGA 59.932 40.000 0.92 0.00 0.00 2.15
3904 5949 5.836898 AGTTCCATGTCAATTGCCATATGAT 59.163 36.000 0.92 0.00 0.00 2.45
3905 5950 5.715434 TCCATGTCAATTGCCATATGATG 57.285 39.130 0.92 0.00 0.00 3.07
3906 5951 5.386924 TCCATGTCAATTGCCATATGATGA 58.613 37.500 0.92 0.00 0.00 2.92
3907 5952 6.014012 TCCATGTCAATTGCCATATGATGAT 58.986 36.000 0.92 0.00 0.00 2.45
3908 5953 6.071616 TCCATGTCAATTGCCATATGATGATG 60.072 38.462 0.92 0.00 0.00 3.07
3909 5954 6.295067 CCATGTCAATTGCCATATGATGATGT 60.295 38.462 0.92 0.00 0.00 3.06
3910 5955 6.321848 TGTCAATTGCCATATGATGATGTC 57.678 37.500 3.65 0.00 0.00 3.06
3911 5956 5.828859 TGTCAATTGCCATATGATGATGTCA 59.171 36.000 3.65 0.00 42.06 3.58
3912 5957 6.016610 TGTCAATTGCCATATGATGATGTCAG 60.017 38.462 3.65 0.00 40.92 3.51
3913 5958 6.016527 GTCAATTGCCATATGATGATGTCAGT 60.017 38.462 3.65 0.00 40.92 3.41
3914 5959 6.548251 TCAATTGCCATATGATGATGTCAGTT 59.452 34.615 3.65 0.00 40.92 3.16
3915 5960 6.570672 ATTGCCATATGATGATGTCAGTTC 57.429 37.500 3.65 0.00 40.92 3.01
3916 5961 4.392047 TGCCATATGATGATGTCAGTTCC 58.608 43.478 3.65 0.00 40.92 3.62
3917 5962 4.141436 TGCCATATGATGATGTCAGTTCCA 60.141 41.667 3.65 0.00 40.92 3.53
3918 5963 5.008331 GCCATATGATGATGTCAGTTCCAT 58.992 41.667 3.65 0.00 40.92 3.41
3919 5964 5.106277 GCCATATGATGATGTCAGTTCCATG 60.106 44.000 3.65 0.00 40.92 3.66
4015 6060 7.961326 AAGTTGGTCTAGATTGGCATAATTT 57.039 32.000 0.00 0.00 0.00 1.82
4161 6206 1.380403 TTCACCGTGGCTGTGGTTTG 61.380 55.000 0.00 0.00 35.96 2.93
4163 6208 0.816018 CACCGTGGCTGTGGTTTGTA 60.816 55.000 0.00 0.00 35.96 2.41
4164 6209 0.107116 ACCGTGGCTGTGGTTTGTAA 60.107 50.000 0.00 0.00 33.81 2.41
4165 6210 0.591170 CCGTGGCTGTGGTTTGTAAG 59.409 55.000 0.00 0.00 0.00 2.34
4166 6211 0.040425 CGTGGCTGTGGTTTGTAAGC 60.040 55.000 0.00 0.00 34.86 3.09
4168 6213 1.579429 GGCTGTGGTTTGTAAGCCG 59.421 57.895 0.00 0.00 45.30 5.52
4169 6214 0.887387 GGCTGTGGTTTGTAAGCCGA 60.887 55.000 0.00 0.00 45.30 5.54
4170 6215 0.517316 GCTGTGGTTTGTAAGCCGAG 59.483 55.000 0.00 0.00 31.02 4.63
4171 6216 1.156736 CTGTGGTTTGTAAGCCGAGG 58.843 55.000 0.00 0.00 31.02 4.63
4172 6217 0.887387 TGTGGTTTGTAAGCCGAGGC 60.887 55.000 5.89 5.89 42.33 4.70
4174 6219 0.179015 TGGTTTGTAAGCCGAGGCAA 60.179 50.000 17.18 0.71 44.88 4.52
4177 6222 2.949644 GGTTTGTAAGCCGAGGCAATAT 59.050 45.455 17.18 2.21 44.88 1.28
4178 6223 4.131596 GGTTTGTAAGCCGAGGCAATATA 58.868 43.478 17.18 4.77 44.88 0.86
4179 6224 4.760204 GGTTTGTAAGCCGAGGCAATATAT 59.240 41.667 17.18 0.00 44.88 0.86
4180 6225 5.240844 GGTTTGTAAGCCGAGGCAATATATT 59.759 40.000 17.18 3.19 44.88 1.28
4181 6226 6.238925 GGTTTGTAAGCCGAGGCAATATATTT 60.239 38.462 17.18 2.47 44.88 1.40
4345 6501 8.522830 CATCTTATGGTTCCAATGTTTGTAAGT 58.477 33.333 0.00 0.00 0.00 2.24
5302 7596 2.683362 GGAATCCCTTGACGATTGGTTC 59.317 50.000 0.00 0.00 30.08 3.62
5789 8083 4.579454 GGTACTATACGGACATGCAGAA 57.421 45.455 0.00 0.00 0.00 3.02
5790 8084 5.135508 GGTACTATACGGACATGCAGAAT 57.864 43.478 0.00 0.00 0.00 2.40
5791 8085 5.539048 GGTACTATACGGACATGCAGAATT 58.461 41.667 0.00 0.00 0.00 2.17
5792 8086 5.634020 GGTACTATACGGACATGCAGAATTC 59.366 44.000 0.00 0.00 0.00 2.17
5793 8087 4.299155 ACTATACGGACATGCAGAATTCG 58.701 43.478 0.00 0.00 0.00 3.34
5798 8092 2.352651 CGGACATGCAGAATTCGTTCAT 59.647 45.455 0.00 2.41 0.00 2.57
5799 8093 3.544834 CGGACATGCAGAATTCGTTCATC 60.545 47.826 0.00 0.00 0.00 2.92
5800 8094 3.544834 GGACATGCAGAATTCGTTCATCG 60.545 47.826 0.00 3.66 41.41 3.84
5812 8106 4.140518 TCGTTCATCGAAACCATGTTTG 57.859 40.909 0.00 0.00 45.98 2.93
5813 8107 3.058570 TCGTTCATCGAAACCATGTTTGG 60.059 43.478 0.00 0.00 46.29 3.28
5814 8108 4.451022 CGTTCATCGAAACCATGTTTGGC 61.451 47.826 0.00 0.00 43.95 4.52
5823 8117 1.086696 CCATGTTTGGCCTACAGACG 58.913 55.000 15.00 7.56 37.01 4.18
5824 8118 1.610624 CCATGTTTGGCCTACAGACGT 60.611 52.381 15.00 0.00 37.01 4.34
5825 8119 1.464608 CATGTTTGGCCTACAGACGTG 59.535 52.381 15.00 6.41 42.50 4.49
5826 8120 0.250124 TGTTTGGCCTACAGACGTGG 60.250 55.000 3.32 0.00 37.01 4.94
5827 8121 1.302192 TTTGGCCTACAGACGTGGC 60.302 57.895 3.32 5.31 45.42 5.01
5830 8124 3.799753 GCCTACAGACGTGGCATG 58.200 61.111 8.85 4.87 45.46 4.06
5831 8125 1.079127 GCCTACAGACGTGGCATGT 60.079 57.895 13.11 13.11 45.46 3.21
5832 8126 0.673644 GCCTACAGACGTGGCATGTT 60.674 55.000 14.54 0.39 45.46 2.71
5833 8127 1.078709 CCTACAGACGTGGCATGTTG 58.921 55.000 14.54 15.25 0.00 3.33
5834 8128 1.337728 CCTACAGACGTGGCATGTTGA 60.338 52.381 14.54 0.00 0.00 3.18
5835 8129 1.726791 CTACAGACGTGGCATGTTGAC 59.273 52.381 14.54 1.10 0.00 3.18
5836 8130 1.221466 ACAGACGTGGCATGTTGACG 61.221 55.000 14.54 2.25 39.03 4.35
5837 8131 1.667830 AGACGTGGCATGTTGACGG 60.668 57.895 14.54 1.77 37.42 4.79
5838 8132 1.959226 GACGTGGCATGTTGACGGT 60.959 57.895 14.54 0.00 37.42 4.83
5839 8133 1.897398 GACGTGGCATGTTGACGGTC 61.897 60.000 14.54 0.00 37.42 4.79
5840 8134 2.677003 CGTGGCATGTTGACGGTCC 61.677 63.158 5.55 0.00 0.00 4.46
5841 8135 2.033448 TGGCATGTTGACGGTCCC 59.967 61.111 5.55 0.00 0.00 4.46
5842 8136 2.351276 GGCATGTTGACGGTCCCT 59.649 61.111 5.55 0.00 0.00 4.20
5843 8137 1.195442 TGGCATGTTGACGGTCCCTA 61.195 55.000 5.55 0.00 0.00 3.53
5844 8138 0.180406 GGCATGTTGACGGTCCCTAT 59.820 55.000 5.55 0.00 0.00 2.57
5847 8141 1.407618 CATGTTGACGGTCCCTATCGA 59.592 52.381 5.55 0.00 32.06 3.59
5849 8143 1.894466 TGTTGACGGTCCCTATCGAAA 59.106 47.619 5.55 0.00 32.06 3.46
5992 8286 2.677003 CGTGGCATGTTGACGGTCC 61.677 63.158 5.55 0.00 0.00 4.46
6187 8481 2.031012 TCCTTGCTGGCGTCACAG 59.969 61.111 0.00 0.00 41.41 3.66
6206 8501 4.327357 CACAGCACTCTAACGGTATTCAAG 59.673 45.833 0.00 0.00 0.00 3.02
6322 8617 2.707791 CTCCAGAAGCCATGGATCCTAA 59.292 50.000 18.40 0.00 45.64 2.69
6917 9330 6.128282 GCTAACTGCTACTTGTCAAGCATTTA 60.128 38.462 12.66 9.40 46.96 1.40
6952 9365 7.829211 TCTGGATTTTCTTTCACGAGGATAATT 59.171 33.333 0.00 0.00 0.00 1.40
7057 9472 0.250727 CCAGGAGGTTTCGAAGGCAA 60.251 55.000 0.00 0.00 0.00 4.52
7137 9552 5.047164 TCTCATTTATTTTGCTGCCACATGT 60.047 36.000 0.00 0.00 0.00 3.21
7272 9687 7.491696 GCGTTAAGGCGAGGAATAATTAGATAT 59.508 37.037 4.12 0.00 0.00 1.63
7321 9737 1.909700 CCAGTTGGTGGTAGCATGTT 58.090 50.000 0.00 0.00 42.17 2.71
7437 9857 2.054799 TCTTGTTTGTAGGGAGGTGCT 58.945 47.619 0.00 0.00 0.00 4.40
7438 9858 2.441750 TCTTGTTTGTAGGGAGGTGCTT 59.558 45.455 0.00 0.00 0.00 3.91
7439 9859 2.270352 TGTTTGTAGGGAGGTGCTTG 57.730 50.000 0.00 0.00 0.00 4.01
7440 9860 0.881796 GTTTGTAGGGAGGTGCTTGC 59.118 55.000 0.00 0.00 0.00 4.01
7481 9901 7.754924 CACATTAACAAACAGAGTGAAAACACT 59.245 33.333 2.45 2.45 38.26 3.55
7651 10077 4.380867 GGTCATGCCACTTGTTATTCTTGG 60.381 45.833 1.78 0.00 37.17 3.61
7867 10318 1.684248 CCAGCCCATTTCTGCTAGCTT 60.684 52.381 17.23 0.00 35.69 3.74
8043 10786 4.908156 CAGTTCACTTGAATTTCTGCGAAG 59.092 41.667 0.00 0.00 36.33 3.79
8091 10834 1.792367 TGTCGAAAGTGTCATTCTGCG 59.208 47.619 0.00 0.00 0.00 5.18
8093 10836 0.512518 CGAAAGTGTCATTCTGCGCA 59.487 50.000 10.98 10.98 0.00 6.09
8097 10840 0.588252 AGTGTCATTCTGCGCACAAC 59.412 50.000 5.66 0.61 34.59 3.32
8219 10962 4.231718 TCGTGATGCTTTGGGTAAAAAC 57.768 40.909 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.132923 CCTCCCGATATTAGTGAAGCTATTATA 57.867 37.037 0.00 0.00 30.60 0.98
27 28 7.839705 TCCTCCCGATATTAGTGAAGCTATTAT 59.160 37.037 0.00 0.00 32.16 1.28
28 29 7.179966 TCCTCCCGATATTAGTGAAGCTATTA 58.820 38.462 0.00 0.00 0.00 0.98
29 30 6.017192 TCCTCCCGATATTAGTGAAGCTATT 58.983 40.000 0.00 0.00 0.00 1.73
30 31 5.580998 TCCTCCCGATATTAGTGAAGCTAT 58.419 41.667 0.00 0.00 0.00 2.97
31 32 4.994282 TCCTCCCGATATTAGTGAAGCTA 58.006 43.478 0.00 0.00 0.00 3.32
32 33 3.845860 TCCTCCCGATATTAGTGAAGCT 58.154 45.455 0.00 0.00 0.00 3.74
33 34 4.810191 ATCCTCCCGATATTAGTGAAGC 57.190 45.455 0.00 0.00 0.00 3.86
45 46 9.992442 ACTTCTCTTTATAATATATCCTCCCGA 57.008 33.333 0.00 0.00 0.00 5.14
68 69 5.693769 TTAAATCGAGGGAAGGATGACTT 57.306 39.130 0.00 0.00 43.65 3.01
69 70 5.693769 TTTAAATCGAGGGAAGGATGACT 57.306 39.130 0.00 0.00 0.00 3.41
70 71 5.239525 CCATTTAAATCGAGGGAAGGATGAC 59.760 44.000 0.00 0.00 0.00 3.06
71 72 5.131977 TCCATTTAAATCGAGGGAAGGATGA 59.868 40.000 0.00 0.00 0.00 2.92
72 73 5.376625 TCCATTTAAATCGAGGGAAGGATG 58.623 41.667 0.00 0.00 0.00 3.51
73 74 5.646692 TCCATTTAAATCGAGGGAAGGAT 57.353 39.130 0.00 0.00 0.00 3.24
74 75 5.621193 GATCCATTTAAATCGAGGGAAGGA 58.379 41.667 8.57 5.79 0.00 3.36
75 76 4.452455 CGATCCATTTAAATCGAGGGAAGG 59.548 45.833 8.57 0.99 45.83 3.46
76 77 5.297547 TCGATCCATTTAAATCGAGGGAAG 58.702 41.667 7.38 6.29 46.30 3.46
77 78 5.284861 TCGATCCATTTAAATCGAGGGAA 57.715 39.130 7.38 0.00 46.30 3.97
78 79 4.948341 TCGATCCATTTAAATCGAGGGA 57.052 40.909 7.38 7.33 46.30 4.20
83 84 6.785488 TGGATCTTCGATCCATTTAAATCG 57.215 37.500 18.90 0.00 42.81 3.34
93 94 8.480643 AAATAAATCGTATGGATCTTCGATCC 57.519 34.615 14.47 14.47 41.17 3.36
96 97 9.976511 AACTAAATAAATCGTATGGATCTTCGA 57.023 29.630 0.00 0.00 33.02 3.71
103 104 8.988934 GCATCTCAACTAAATAAATCGTATGGA 58.011 33.333 0.00 0.00 0.00 3.41
104 105 8.773645 TGCATCTCAACTAAATAAATCGTATGG 58.226 33.333 0.00 0.00 0.00 2.74
108 109 9.559958 CTTTTGCATCTCAACTAAATAAATCGT 57.440 29.630 0.00 0.00 33.73 3.73
109 110 9.773328 TCTTTTGCATCTCAACTAAATAAATCG 57.227 29.630 0.00 0.00 33.73 3.34
118 119 9.671279 TCTCATAAATCTTTTGCATCTCAACTA 57.329 29.630 0.00 0.00 33.73 2.24
119 120 8.571461 TCTCATAAATCTTTTGCATCTCAACT 57.429 30.769 0.00 0.00 33.73 3.16
120 121 9.234384 CATCTCATAAATCTTTTGCATCTCAAC 57.766 33.333 0.00 0.00 33.73 3.18
121 122 9.181061 TCATCTCATAAATCTTTTGCATCTCAA 57.819 29.630 0.00 0.00 0.00 3.02
122 123 8.741603 TCATCTCATAAATCTTTTGCATCTCA 57.258 30.769 0.00 0.00 0.00 3.27
123 124 9.613957 CATCATCTCATAAATCTTTTGCATCTC 57.386 33.333 0.00 0.00 0.00 2.75
124 125 8.577296 CCATCATCTCATAAATCTTTTGCATCT 58.423 33.333 0.00 0.00 0.00 2.90
125 126 7.328737 GCCATCATCTCATAAATCTTTTGCATC 59.671 37.037 0.00 0.00 0.00 3.91
126 127 7.152645 GCCATCATCTCATAAATCTTTTGCAT 58.847 34.615 0.00 0.00 0.00 3.96
127 128 6.097129 TGCCATCATCTCATAAATCTTTTGCA 59.903 34.615 0.00 0.00 0.00 4.08
128 129 6.509656 TGCCATCATCTCATAAATCTTTTGC 58.490 36.000 0.00 0.00 0.00 3.68
129 130 8.357402 TCATGCCATCATCTCATAAATCTTTTG 58.643 33.333 0.00 0.00 0.00 2.44
130 131 8.473358 TCATGCCATCATCTCATAAATCTTTT 57.527 30.769 0.00 0.00 0.00 2.27
131 132 8.523658 CATCATGCCATCATCTCATAAATCTTT 58.476 33.333 0.00 0.00 0.00 2.52
132 133 7.888546 TCATCATGCCATCATCTCATAAATCTT 59.111 33.333 0.00 0.00 0.00 2.40
133 134 7.337184 GTCATCATGCCATCATCTCATAAATCT 59.663 37.037 0.00 0.00 0.00 2.40
134 135 7.120726 TGTCATCATGCCATCATCTCATAAATC 59.879 37.037 0.00 0.00 0.00 2.17
135 136 6.946009 TGTCATCATGCCATCATCTCATAAAT 59.054 34.615 0.00 0.00 0.00 1.40
136 137 6.300703 TGTCATCATGCCATCATCTCATAAA 58.699 36.000 0.00 0.00 0.00 1.40
137 138 5.871834 TGTCATCATGCCATCATCTCATAA 58.128 37.500 0.00 0.00 0.00 1.90
138 139 5.492855 TGTCATCATGCCATCATCTCATA 57.507 39.130 0.00 0.00 0.00 2.15
139 140 4.367039 TGTCATCATGCCATCATCTCAT 57.633 40.909 0.00 0.00 0.00 2.90
140 141 3.849563 TGTCATCATGCCATCATCTCA 57.150 42.857 0.00 0.00 0.00 3.27
141 142 4.686839 CATGTCATCATGCCATCATCTC 57.313 45.455 0.00 0.00 43.66 2.75
149 150 6.817434 TGCATTGCATCATGTCATCATGCC 62.817 45.833 17.82 4.29 41.34 4.40
150 151 3.798548 TGCATTGCATCATGTCATCATGC 60.799 43.478 14.26 14.26 41.34 4.06
151 152 3.976169 TGCATTGCATCATGTCATCATG 58.024 40.909 7.38 0.00 42.12 3.07
152 153 4.664150 TTGCATTGCATCATGTCATCAT 57.336 36.364 12.95 0.00 38.76 2.45
153 154 4.457834 TTTGCATTGCATCATGTCATCA 57.542 36.364 12.95 0.00 38.76 3.07
154 155 5.788055 TTTTTGCATTGCATCATGTCATC 57.212 34.783 12.95 0.00 38.76 2.92
174 175 7.994194 TCATTTGTGCTTGCCTTTTTATTTTT 58.006 26.923 0.00 0.00 0.00 1.94
175 176 7.565323 TCATTTGTGCTTGCCTTTTTATTTT 57.435 28.000 0.00 0.00 0.00 1.82
176 177 7.565323 TTCATTTGTGCTTGCCTTTTTATTT 57.435 28.000 0.00 0.00 0.00 1.40
177 178 7.066766 TGTTTCATTTGTGCTTGCCTTTTTATT 59.933 29.630 0.00 0.00 0.00 1.40
178 179 6.541641 TGTTTCATTTGTGCTTGCCTTTTTAT 59.458 30.769 0.00 0.00 0.00 1.40
179 180 5.877012 TGTTTCATTTGTGCTTGCCTTTTTA 59.123 32.000 0.00 0.00 0.00 1.52
180 181 4.699257 TGTTTCATTTGTGCTTGCCTTTTT 59.301 33.333 0.00 0.00 0.00 1.94
181 182 4.260170 TGTTTCATTTGTGCTTGCCTTTT 58.740 34.783 0.00 0.00 0.00 2.27
182 183 3.871485 TGTTTCATTTGTGCTTGCCTTT 58.129 36.364 0.00 0.00 0.00 3.11
183 184 3.540314 TGTTTCATTTGTGCTTGCCTT 57.460 38.095 0.00 0.00 0.00 4.35
184 185 3.756933 ATGTTTCATTTGTGCTTGCCT 57.243 38.095 0.00 0.00 0.00 4.75
185 186 3.364621 CGTATGTTTCATTTGTGCTTGCC 59.635 43.478 0.00 0.00 0.00 4.52
186 187 3.364621 CCGTATGTTTCATTTGTGCTTGC 59.635 43.478 0.00 0.00 0.00 4.01
187 188 3.364621 GCCGTATGTTTCATTTGTGCTTG 59.635 43.478 0.00 0.00 0.00 4.01
188 189 3.574614 GCCGTATGTTTCATTTGTGCTT 58.425 40.909 0.00 0.00 0.00 3.91
189 190 2.414029 CGCCGTATGTTTCATTTGTGCT 60.414 45.455 0.00 0.00 0.00 4.40
190 191 1.910819 CGCCGTATGTTTCATTTGTGC 59.089 47.619 0.00 0.00 0.00 4.57
191 192 3.463533 TCGCCGTATGTTTCATTTGTG 57.536 42.857 0.00 0.00 0.00 3.33
192 193 4.223659 GTTTCGCCGTATGTTTCATTTGT 58.776 39.130 0.00 0.00 0.00 2.83
193 194 3.606346 GGTTTCGCCGTATGTTTCATTTG 59.394 43.478 0.00 0.00 0.00 2.32
194 195 3.366577 GGGTTTCGCCGTATGTTTCATTT 60.367 43.478 0.00 0.00 38.44 2.32
195 196 2.162809 GGGTTTCGCCGTATGTTTCATT 59.837 45.455 0.00 0.00 38.44 2.57
196 197 1.741145 GGGTTTCGCCGTATGTTTCAT 59.259 47.619 0.00 0.00 38.44 2.57
197 198 1.158434 GGGTTTCGCCGTATGTTTCA 58.842 50.000 0.00 0.00 38.44 2.69
198 199 0.095762 CGGGTTTCGCCGTATGTTTC 59.904 55.000 0.00 0.00 38.44 2.78
199 200 1.300266 CCGGGTTTCGCCGTATGTTT 61.300 55.000 0.00 0.00 38.44 2.83
200 201 1.742510 CCGGGTTTCGCCGTATGTT 60.743 57.895 0.00 0.00 38.44 2.71
201 202 2.125431 CCGGGTTTCGCCGTATGT 60.125 61.111 0.00 0.00 38.44 2.29
202 203 0.812412 ATTCCGGGTTTCGCCGTATG 60.812 55.000 0.00 0.00 38.44 2.39
203 204 0.752054 TATTCCGGGTTTCGCCGTAT 59.248 50.000 0.00 0.00 38.44 3.06
204 205 0.752054 ATATTCCGGGTTTCGCCGTA 59.248 50.000 0.00 0.00 38.44 4.02
205 206 0.752054 TATATTCCGGGTTTCGCCGT 59.248 50.000 0.00 0.00 38.44 5.68
206 207 1.796459 CTTATATTCCGGGTTTCGCCG 59.204 52.381 0.00 0.00 38.44 6.46
207 208 2.148768 CCTTATATTCCGGGTTTCGCC 58.851 52.381 0.00 0.00 37.59 5.54
208 209 3.116079 TCCTTATATTCCGGGTTTCGC 57.884 47.619 0.00 0.00 37.59 4.70
209 210 3.497262 GCTTCCTTATATTCCGGGTTTCG 59.503 47.826 0.00 0.00 38.88 3.46
210 211 3.819337 GGCTTCCTTATATTCCGGGTTTC 59.181 47.826 0.00 0.00 0.00 2.78
211 212 3.462205 AGGCTTCCTTATATTCCGGGTTT 59.538 43.478 0.00 0.00 0.00 3.27
212 213 3.053826 AGGCTTCCTTATATTCCGGGTT 58.946 45.455 0.00 0.00 0.00 4.11
213 214 2.702748 AGGCTTCCTTATATTCCGGGT 58.297 47.619 0.00 0.00 0.00 5.28
214 215 3.328050 AGAAGGCTTCCTTATATTCCGGG 59.672 47.826 23.09 0.00 44.82 5.73
215 216 4.570930 GAGAAGGCTTCCTTATATTCCGG 58.429 47.826 23.09 0.00 44.82 5.14
216 217 4.022242 TCGAGAAGGCTTCCTTATATTCCG 60.022 45.833 23.09 12.21 44.82 4.30
217 218 5.470047 TCGAGAAGGCTTCCTTATATTCC 57.530 43.478 23.09 0.00 44.82 3.01
218 219 4.926832 GCTCGAGAAGGCTTCCTTATATTC 59.073 45.833 23.09 11.36 44.82 1.75
219 220 4.345257 TGCTCGAGAAGGCTTCCTTATATT 59.655 41.667 23.09 2.98 44.82 1.28
220 221 3.898123 TGCTCGAGAAGGCTTCCTTATAT 59.102 43.478 23.09 3.76 44.82 0.86
221 222 3.296854 TGCTCGAGAAGGCTTCCTTATA 58.703 45.455 23.09 3.82 44.82 0.98
222 223 2.111384 TGCTCGAGAAGGCTTCCTTAT 58.889 47.619 23.09 4.95 44.82 1.73
223 224 1.557099 TGCTCGAGAAGGCTTCCTTA 58.443 50.000 23.09 8.09 44.82 2.69
224 225 4.671192 CGATGCTCGAGAAGGCTTCCTT 62.671 54.545 23.09 6.14 44.33 3.36
225 226 0.463620 GATGCTCGAGAAGGCTTCCT 59.536 55.000 23.09 10.91 33.87 3.36
226 227 0.873743 CGATGCTCGAGAAGGCTTCC 60.874 60.000 23.09 13.59 43.74 3.46
227 228 0.873743 CCGATGCTCGAGAAGGCTTC 60.874 60.000 18.75 19.53 43.74 3.86
228 229 1.142748 CCGATGCTCGAGAAGGCTT 59.857 57.895 18.75 0.00 43.74 4.35
229 230 2.010582 GACCGATGCTCGAGAAGGCT 62.011 60.000 18.75 0.00 43.74 4.58
230 231 1.590259 GACCGATGCTCGAGAAGGC 60.590 63.158 18.75 1.14 43.74 4.35
231 232 0.030101 GAGACCGATGCTCGAGAAGG 59.970 60.000 18.75 14.74 43.74 3.46
232 233 3.542825 GAGACCGATGCTCGAGAAG 57.457 57.895 18.75 3.21 43.74 2.85
238 239 4.593864 GCCCCGAGACCGATGCTC 62.594 72.222 0.00 0.00 38.22 4.26
241 242 4.570663 GACGCCCCGAGACCGATG 62.571 72.222 0.00 0.00 38.22 3.84
245 246 3.998672 TTGTGACGCCCCGAGACC 61.999 66.667 0.00 0.00 0.00 3.85
246 247 2.737376 GTTGTGACGCCCCGAGAC 60.737 66.667 0.00 0.00 0.00 3.36
247 248 3.228017 TGTTGTGACGCCCCGAGA 61.228 61.111 0.00 0.00 0.00 4.04
248 249 3.041940 GTGTTGTGACGCCCCGAG 61.042 66.667 0.00 0.00 0.00 4.63
249 250 3.171828 ATGTGTTGTGACGCCCCGA 62.172 57.895 0.00 0.00 35.40 5.14
250 251 2.668212 ATGTGTTGTGACGCCCCG 60.668 61.111 0.00 0.00 35.40 5.73
251 252 1.298859 GAGATGTGTTGTGACGCCCC 61.299 60.000 0.00 0.00 35.40 5.80
252 253 0.320771 AGAGATGTGTTGTGACGCCC 60.321 55.000 0.00 0.00 35.40 6.13
253 254 1.071605 GAGAGATGTGTTGTGACGCC 58.928 55.000 0.00 0.00 35.40 5.68
254 255 1.989165 GAGAGAGATGTGTTGTGACGC 59.011 52.381 0.00 0.00 36.81 5.19
255 256 3.567576 AGAGAGAGATGTGTTGTGACG 57.432 47.619 0.00 0.00 0.00 4.35
256 257 4.241681 GGAAGAGAGAGATGTGTTGTGAC 58.758 47.826 0.00 0.00 0.00 3.67
257 258 3.259374 GGGAAGAGAGAGATGTGTTGTGA 59.741 47.826 0.00 0.00 0.00 3.58
258 259 3.594134 GGGAAGAGAGAGATGTGTTGTG 58.406 50.000 0.00 0.00 0.00 3.33
259 260 2.569404 GGGGAAGAGAGAGATGTGTTGT 59.431 50.000 0.00 0.00 0.00 3.32
260 261 2.093235 GGGGGAAGAGAGAGATGTGTTG 60.093 54.545 0.00 0.00 0.00 3.33
261 262 2.192263 GGGGGAAGAGAGAGATGTGTT 58.808 52.381 0.00 0.00 0.00 3.32
262 263 1.364328 AGGGGGAAGAGAGAGATGTGT 59.636 52.381 0.00 0.00 0.00 3.72
263 264 2.038659 GAGGGGGAAGAGAGAGATGTG 58.961 57.143 0.00 0.00 0.00 3.21
264 265 1.062505 GGAGGGGGAAGAGAGAGATGT 60.063 57.143 0.00 0.00 0.00 3.06
315 316 1.237285 CCGAGTTCCAACCTTGCCAG 61.237 60.000 0.00 0.00 0.00 4.85
317 318 0.322546 ATCCGAGTTCCAACCTTGCC 60.323 55.000 0.00 0.00 0.00 4.52
329 330 2.815308 GCCATCGTCCATCCGAGT 59.185 61.111 0.00 0.00 40.68 4.18
345 346 3.251004 AGACCAACTCAAAGATGAAACGC 59.749 43.478 0.00 0.00 34.49 4.84
348 349 5.532406 CAGGAAGACCAACTCAAAGATGAAA 59.468 40.000 0.00 0.00 38.94 2.69
377 378 7.630728 CCTAACAGACGAATTAGGTGAGAATCA 60.631 40.741 0.00 0.00 41.73 2.57
378 379 6.697892 CCTAACAGACGAATTAGGTGAGAATC 59.302 42.308 0.00 0.00 41.73 2.52
384 385 5.721232 ACTTCCTAACAGACGAATTAGGTG 58.279 41.667 9.31 6.96 45.30 4.00
385 386 5.997384 ACTTCCTAACAGACGAATTAGGT 57.003 39.130 9.31 0.00 45.30 3.08
386 387 6.395629 TCAACTTCCTAACAGACGAATTAGG 58.604 40.000 4.01 4.01 46.10 2.69
388 389 6.816640 CCATCAACTTCCTAACAGACGAATTA 59.183 38.462 0.00 0.00 0.00 1.40
399 400 4.565652 GGCAGAGTTCCATCAACTTCCTAA 60.566 45.833 0.00 0.00 46.10 2.69
400 401 3.055094 GGCAGAGTTCCATCAACTTCCTA 60.055 47.826 0.00 0.00 46.10 2.94
408 412 4.409901 TGAATCTATGGCAGAGTTCCATCA 59.590 41.667 9.24 5.25 42.91 3.07
421 425 8.201554 TCGAAGAAAAAGACATGAATCTATGG 57.798 34.615 0.00 0.00 32.32 2.74
460 464 1.816835 GGTACCAGATCTGACACACGA 59.183 52.381 24.62 0.00 0.00 4.35
461 465 1.544246 TGGTACCAGATCTGACACACG 59.456 52.381 24.62 8.51 0.00 4.49
491 495 0.109919 TCGTCGTCGTTGGACTGATG 60.110 55.000 1.33 0.00 41.16 3.07
498 502 0.787173 GTCGTAGTCGTCGTCGTTGG 60.787 60.000 1.33 0.00 38.33 3.77
542 546 5.790593 ACCGGTAAATCTTCGTGCATATAT 58.209 37.500 4.49 0.00 0.00 0.86
543 547 5.204409 ACCGGTAAATCTTCGTGCATATA 57.796 39.130 4.49 0.00 0.00 0.86
580 584 2.039418 CCCATATCAGAGTCGGTTGGA 58.961 52.381 9.78 0.00 0.00 3.53
582 586 3.118775 TGTTCCCATATCAGAGTCGGTTG 60.119 47.826 0.00 0.00 0.00 3.77
584 588 2.695666 CTGTTCCCATATCAGAGTCGGT 59.304 50.000 0.00 0.00 0.00 4.69
587 591 3.070302 GTCCCTGTTCCCATATCAGAGTC 59.930 52.174 0.00 0.00 0.00 3.36
594 598 2.242196 CACCTTGTCCCTGTTCCCATAT 59.758 50.000 0.00 0.00 0.00 1.78
632 636 0.676782 AACAACCACTATCGCTGCCC 60.677 55.000 0.00 0.00 0.00 5.36
648 652 8.215736 ACATTGAGATATCTGGATCATTGAACA 58.784 33.333 10.74 0.00 31.09 3.18
649 653 8.618702 ACATTGAGATATCTGGATCATTGAAC 57.381 34.615 10.74 0.00 31.09 3.18
691 695 6.147328 AGTTCACCGAAAGTATAAAGCACTTC 59.853 38.462 0.00 0.00 35.19 3.01
782 2756 1.150827 GGTTTCCTACGGGTTGTTCG 58.849 55.000 0.00 0.00 0.00 3.95
883 2858 3.181474 GGCTTAACTTAGAGCTGGACGAT 60.181 47.826 0.00 0.00 38.89 3.73
888 2863 2.633488 GTGGGCTTAACTTAGAGCTGG 58.367 52.381 0.00 0.00 38.89 4.85
924 2903 1.439543 AGAGGCAGGGAAGACTTGTT 58.560 50.000 0.00 0.00 0.00 2.83
929 2908 0.034960 GGGAAAGAGGCAGGGAAGAC 60.035 60.000 0.00 0.00 0.00 3.01
1015 3000 1.472878 CTCGTAGTAGCAGCACTTGGA 59.527 52.381 0.00 0.00 0.00 3.53
1021 3006 2.222886 GAGGATCTCGTAGTAGCAGCA 58.777 52.381 0.00 0.00 0.00 4.41
1101 3086 1.611261 CTTGTCGGGGTGGAGGGTA 60.611 63.158 0.00 0.00 0.00 3.69
1773 3758 3.513515 GCTCCTTCTTCTTCTTCTCCTCA 59.486 47.826 0.00 0.00 0.00 3.86
1911 3896 5.637810 CGACTTGAACTTCTTATTACAGGCA 59.362 40.000 0.00 0.00 0.00 4.75
2085 4073 1.078759 CGGACTCGTTAGCAGGCTTG 61.079 60.000 0.00 0.00 0.00 4.01
2176 4164 8.561738 TTGAAGTCCTTATTACCATTGTCTTC 57.438 34.615 0.00 0.00 0.00 2.87
2238 4226 0.108585 ACATCGCCTCCAACACACTT 59.891 50.000 0.00 0.00 0.00 3.16
2455 4443 5.118990 CACAGATTCCTCATACGGAACATT 58.881 41.667 0.00 0.00 45.24 2.71
2527 4515 3.610040 TGTGCCGTCATCATTAGAAGT 57.390 42.857 0.00 0.00 0.00 3.01
2541 4529 2.969806 AACGCTTGCTGATGTGCCG 61.970 57.895 0.00 0.00 0.00 5.69
2563 4551 2.614057 CAGTCTTTTCGTTCTGTTGGCT 59.386 45.455 0.00 0.00 0.00 4.75
2656 4644 4.214310 TGCTTCTTTCCCTTTGATGTGAA 58.786 39.130 0.00 0.00 0.00 3.18
2707 4695 8.525290 AAAATAAGAACTATGTCCTGGATTGG 57.475 34.615 0.00 0.00 0.00 3.16
2807 4795 8.602328 TCAAACAATGTCAAATAGTTTTTGCTG 58.398 29.630 1.53 0.47 30.68 4.41
2910 4898 1.834263 GACACCCTATCTGCTCACCTT 59.166 52.381 0.00 0.00 0.00 3.50
2937 4925 3.751175 TCCAAATAAGTGGTTCTTCAGCG 59.249 43.478 0.00 0.00 39.88 5.18
3083 5073 9.314321 CGTAAAATCAATGACATAGGACTTAGT 57.686 33.333 0.00 0.00 0.00 2.24
3242 5255 1.244019 AACAGGGCGCTGGAATTGAC 61.244 55.000 31.41 0.00 0.00 3.18
3374 5387 9.566331 ACTATCATCATATTTCCCTTCCTATCA 57.434 33.333 0.00 0.00 0.00 2.15
3400 5413 5.245977 TCACCATACACAGTTCTCATGAAGA 59.754 40.000 0.00 0.00 32.15 2.87
3437 5450 1.251251 AGCTCAAAACCCATCAGCAC 58.749 50.000 0.00 0.00 32.17 4.40
3494 5507 2.105134 TGTACTCCCGGCAGAAGAAAAA 59.895 45.455 0.00 0.00 0.00 1.94
3499 5514 0.108615 CACTGTACTCCCGGCAGAAG 60.109 60.000 12.31 3.40 34.60 2.85
3504 5519 0.320697 AAGAACACTGTACTCCCGGC 59.679 55.000 0.00 0.00 0.00 6.13
3510 5525 7.727181 ACTATCAAAGACAAGAACACTGTACT 58.273 34.615 0.00 0.00 0.00 2.73
3658 5679 8.398665 GTTTAGCAAACAAGAGATACCCATAAG 58.601 37.037 6.82 0.00 41.04 1.73
3659 5680 8.107095 AGTTTAGCAAACAAGAGATACCCATAA 58.893 33.333 12.28 0.00 43.79 1.90
3660 5681 7.630082 AGTTTAGCAAACAAGAGATACCCATA 58.370 34.615 12.28 0.00 43.79 2.74
3661 5682 6.485171 AGTTTAGCAAACAAGAGATACCCAT 58.515 36.000 12.28 0.00 43.79 4.00
3664 5688 7.435068 TTGAGTTTAGCAAACAAGAGATACC 57.565 36.000 12.28 0.00 43.79 2.73
3671 5695 8.223100 GCCAAAATATTGAGTTTAGCAAACAAG 58.777 33.333 12.28 0.00 38.77 3.16
3858 5903 6.066032 ACTGACATCATCATATGGCAATTGA 58.934 36.000 10.34 5.36 44.22 2.57
3859 5904 6.327279 ACTGACATCATCATATGGCAATTG 57.673 37.500 2.13 0.00 44.22 2.32
3860 5905 6.015688 GGAACTGACATCATCATATGGCAATT 60.016 38.462 2.13 0.00 44.22 2.32
3861 5906 5.475909 GGAACTGACATCATCATATGGCAAT 59.524 40.000 2.13 0.00 44.22 3.56
3862 5907 4.823442 GGAACTGACATCATCATATGGCAA 59.177 41.667 2.13 0.00 44.22 4.52
3863 5908 4.141436 TGGAACTGACATCATCATATGGCA 60.141 41.667 2.13 0.00 42.69 4.92
3864 5909 4.392047 TGGAACTGACATCATCATATGGC 58.608 43.478 2.13 0.00 36.48 4.40
3865 5910 6.002082 ACATGGAACTGACATCATCATATGG 58.998 40.000 2.13 0.00 36.48 2.74
3866 5911 6.708949 TGACATGGAACTGACATCATCATATG 59.291 38.462 0.00 0.00 36.48 1.78
3867 5912 6.834107 TGACATGGAACTGACATCATCATAT 58.166 36.000 0.00 0.00 36.48 1.78
3868 5913 6.237887 TGACATGGAACTGACATCATCATA 57.762 37.500 0.00 0.00 36.48 2.15
3869 5914 5.106876 TGACATGGAACTGACATCATCAT 57.893 39.130 0.00 0.00 36.48 2.45
3870 5915 4.556592 TGACATGGAACTGACATCATCA 57.443 40.909 0.00 0.00 35.45 3.07
3871 5916 6.263344 CAATTGACATGGAACTGACATCATC 58.737 40.000 0.00 0.00 0.00 2.92
3872 5917 5.393787 GCAATTGACATGGAACTGACATCAT 60.394 40.000 10.34 0.00 0.00 2.45
3873 5918 4.082625 GCAATTGACATGGAACTGACATCA 60.083 41.667 10.34 0.00 0.00 3.07
3874 5919 4.418392 GCAATTGACATGGAACTGACATC 58.582 43.478 10.34 0.00 0.00 3.06
3875 5920 3.194116 GGCAATTGACATGGAACTGACAT 59.806 43.478 10.34 0.00 0.00 3.06
3876 5921 2.557924 GGCAATTGACATGGAACTGACA 59.442 45.455 10.34 0.00 0.00 3.58
3877 5922 2.557924 TGGCAATTGACATGGAACTGAC 59.442 45.455 10.79 0.00 0.00 3.51
3878 5923 2.874014 TGGCAATTGACATGGAACTGA 58.126 42.857 10.79 0.00 0.00 3.41
3879 5924 3.880047 ATGGCAATTGACATGGAACTG 57.120 42.857 26.10 0.00 43.38 3.16
3880 5925 5.202765 TCATATGGCAATTGACATGGAACT 58.797 37.500 32.77 12.26 44.95 3.01
3881 5926 5.518848 TCATATGGCAATTGACATGGAAC 57.481 39.130 32.77 2.02 44.95 3.62
3882 5927 5.834204 TCATCATATGGCAATTGACATGGAA 59.166 36.000 32.77 16.55 44.95 3.53
3883 5928 5.386924 TCATCATATGGCAATTGACATGGA 58.613 37.500 32.77 27.97 44.95 3.41
3884 5929 5.715434 TCATCATATGGCAATTGACATGG 57.285 39.130 32.77 24.36 44.95 3.66
3885 5930 6.687604 ACATCATCATATGGCAATTGACATG 58.312 36.000 32.77 20.90 44.95 3.21
3886 5931 6.492087 TGACATCATCATATGGCAATTGACAT 59.508 34.615 29.04 29.04 41.97 3.06
3887 5932 5.828859 TGACATCATCATATGGCAATTGACA 59.171 36.000 18.19 18.19 41.97 3.58
3888 5933 6.016527 ACTGACATCATCATATGGCAATTGAC 60.017 38.462 10.34 7.09 44.22 3.18
3889 5934 6.066032 ACTGACATCATCATATGGCAATTGA 58.934 36.000 10.34 5.36 44.22 2.57
3890 5935 6.327279 ACTGACATCATCATATGGCAATTG 57.673 37.500 2.13 0.00 44.22 2.32
3891 5936 6.015688 GGAACTGACATCATCATATGGCAATT 60.016 38.462 2.13 0.00 44.22 2.32
3892 5937 5.475909 GGAACTGACATCATCATATGGCAAT 59.524 40.000 2.13 0.00 44.22 3.56
3893 5938 4.823442 GGAACTGACATCATCATATGGCAA 59.177 41.667 2.13 0.00 44.22 4.52
3894 5939 4.141436 TGGAACTGACATCATCATATGGCA 60.141 41.667 2.13 0.00 42.69 4.92
3895 5940 4.392047 TGGAACTGACATCATCATATGGC 58.608 43.478 2.13 0.00 36.48 4.40
3896 5941 6.002082 ACATGGAACTGACATCATCATATGG 58.998 40.000 2.13 0.00 36.48 2.74
3897 5942 6.708949 TGACATGGAACTGACATCATCATATG 59.291 38.462 0.00 0.00 36.48 1.78
3898 5943 6.834107 TGACATGGAACTGACATCATCATAT 58.166 36.000 0.00 0.00 36.48 1.78
3899 5944 6.237887 TGACATGGAACTGACATCATCATA 57.762 37.500 0.00 0.00 36.48 2.15
3900 5945 5.106876 TGACATGGAACTGACATCATCAT 57.893 39.130 0.00 0.00 36.48 2.45
3901 5946 4.556592 TGACATGGAACTGACATCATCA 57.443 40.909 0.00 0.00 35.45 3.07
3902 5947 6.263344 CAATTGACATGGAACTGACATCATC 58.737 40.000 0.00 0.00 0.00 2.92
3903 5948 5.393787 GCAATTGACATGGAACTGACATCAT 60.394 40.000 10.34 0.00 0.00 2.45
3904 5949 4.082625 GCAATTGACATGGAACTGACATCA 60.083 41.667 10.34 0.00 0.00 3.07
3905 5950 4.418392 GCAATTGACATGGAACTGACATC 58.582 43.478 10.34 0.00 0.00 3.06
3906 5951 3.194116 GGCAATTGACATGGAACTGACAT 59.806 43.478 10.34 0.00 0.00 3.06
3907 5952 2.557924 GGCAATTGACATGGAACTGACA 59.442 45.455 10.34 0.00 0.00 3.58
3908 5953 2.557924 TGGCAATTGACATGGAACTGAC 59.442 45.455 10.79 0.00 0.00 3.51
3909 5954 2.874014 TGGCAATTGACATGGAACTGA 58.126 42.857 10.79 0.00 0.00 3.41
3910 5955 3.880047 ATGGCAATTGACATGGAACTG 57.120 42.857 26.10 0.00 43.38 3.16
3911 5956 5.202765 TCATATGGCAATTGACATGGAACT 58.797 37.500 32.77 12.26 44.95 3.01
3912 5957 5.518848 TCATATGGCAATTGACATGGAAC 57.481 39.130 32.77 2.02 44.95 3.62
3913 5958 5.011227 CCATCATATGGCAATTGACATGGAA 59.989 40.000 32.77 16.55 44.95 3.53
3914 5959 4.525100 CCATCATATGGCAATTGACATGGA 59.475 41.667 32.77 27.97 44.95 3.41
3915 5960 4.816392 CCATCATATGGCAATTGACATGG 58.184 43.478 32.77 23.70 44.95 3.66
3965 6010 3.374988 TGAACAGACACACAGAAAAGCAG 59.625 43.478 0.00 0.00 0.00 4.24
4039 6084 8.767085 CAAAACACATGAGCTAATTTCAAACAT 58.233 29.630 0.00 0.00 0.00 2.71
4040 6085 7.254387 GCAAAACACATGAGCTAATTTCAAACA 60.254 33.333 0.00 0.00 0.00 2.83
4147 6192 0.040425 GCTTACAAACCACAGCCACG 60.040 55.000 0.00 0.00 0.00 4.94
4161 6206 5.001232 TGGAAATATATTGCCTCGGCTTAC 58.999 41.667 21.19 0.00 42.51 2.34
4163 6208 4.098914 TGGAAATATATTGCCTCGGCTT 57.901 40.909 21.19 0.00 42.51 4.35
4164 6209 3.788227 TGGAAATATATTGCCTCGGCT 57.212 42.857 21.19 0.00 42.51 5.52
4165 6210 4.846779 TTTGGAAATATATTGCCTCGGC 57.153 40.909 21.19 0.00 36.37 5.54
4166 6211 6.086222 CGAATTTGGAAATATATTGCCTCGG 58.914 40.000 21.19 5.77 36.37 4.63
4167 6212 6.668323 ACGAATTTGGAAATATATTGCCTCG 58.332 36.000 21.80 21.80 36.37 4.63
4168 6213 8.871686 AAACGAATTTGGAAATATATTGCCTC 57.128 30.769 21.19 10.73 36.37 4.70
4169 6214 8.474025 TGAAACGAATTTGGAAATATATTGCCT 58.526 29.630 21.19 3.08 36.37 4.75
4170 6215 8.641499 TGAAACGAATTTGGAAATATATTGCC 57.359 30.769 14.96 14.96 35.92 4.52
4177 6222 9.920133 TTTCATGATGAAACGAATTTGGAAATA 57.080 25.926 16.04 0.00 41.02 1.40
4178 6223 8.830201 TTTCATGATGAAACGAATTTGGAAAT 57.170 26.923 16.04 0.00 41.02 2.17
4247 6401 7.824779 GTCTAAGTTTGACCAAGTCCATAGAAT 59.175 37.037 6.21 0.00 0.00 2.40
5768 8062 4.579454 TTCTGCATGTCCGTATAGTACC 57.421 45.455 0.00 0.00 0.00 3.34
5769 8063 5.342525 CGAATTCTGCATGTCCGTATAGTAC 59.657 44.000 3.52 0.00 0.00 2.73
5770 8064 5.009310 ACGAATTCTGCATGTCCGTATAGTA 59.991 40.000 3.52 0.00 0.00 1.82
5771 8065 4.202121 ACGAATTCTGCATGTCCGTATAGT 60.202 41.667 3.52 0.00 0.00 2.12
5773 8067 4.316205 ACGAATTCTGCATGTCCGTATA 57.684 40.909 3.52 0.00 0.00 1.47
5774 8068 3.179443 ACGAATTCTGCATGTCCGTAT 57.821 42.857 3.52 0.00 0.00 3.06
5776 8070 1.732259 GAACGAATTCTGCATGTCCGT 59.268 47.619 3.52 0.00 31.55 4.69
5779 8073 3.601356 CGATGAACGAATTCTGCATGTC 58.399 45.455 3.52 0.00 45.77 3.06
5780 8074 3.663464 CGATGAACGAATTCTGCATGT 57.337 42.857 3.52 0.00 45.77 3.21
5792 8086 3.233578 CCAAACATGGTTTCGATGAACG 58.766 45.455 0.00 0.00 44.09 3.95
5793 8087 2.986479 GCCAAACATGGTTTCGATGAAC 59.014 45.455 0.00 0.00 0.00 3.18
5798 8092 2.156098 GTAGGCCAAACATGGTTTCGA 58.844 47.619 5.01 0.00 0.00 3.71
5799 8093 1.883275 TGTAGGCCAAACATGGTTTCG 59.117 47.619 5.01 0.00 0.00 3.46
5800 8094 3.057526 GTCTGTAGGCCAAACATGGTTTC 60.058 47.826 5.01 0.00 0.00 2.78
5802 8096 2.514803 GTCTGTAGGCCAAACATGGTT 58.485 47.619 5.01 0.00 0.00 3.67
5803 8097 1.610624 CGTCTGTAGGCCAAACATGGT 60.611 52.381 5.01 0.00 0.00 3.55
5805 8099 1.464608 CACGTCTGTAGGCCAAACATG 59.535 52.381 5.01 4.79 0.00 3.21
5807 8101 0.250124 CCACGTCTGTAGGCCAAACA 60.250 55.000 5.01 8.29 0.00 2.83
5808 8102 1.574702 GCCACGTCTGTAGGCCAAAC 61.575 60.000 5.01 2.84 42.58 2.93
5809 8103 1.302192 GCCACGTCTGTAGGCCAAA 60.302 57.895 5.01 0.00 42.58 3.28
5814 8108 1.078709 CAACATGCCACGTCTGTAGG 58.921 55.000 0.00 0.00 0.00 3.18
5815 8109 1.726791 GTCAACATGCCACGTCTGTAG 59.273 52.381 0.00 0.00 0.00 2.74
5816 8110 1.790755 GTCAACATGCCACGTCTGTA 58.209 50.000 0.00 0.00 0.00 2.74
5817 8111 1.221466 CGTCAACATGCCACGTCTGT 61.221 55.000 0.00 0.00 0.00 3.41
5818 8112 1.492873 CGTCAACATGCCACGTCTG 59.507 57.895 0.00 0.00 0.00 3.51
5819 8113 1.667830 CCGTCAACATGCCACGTCT 60.668 57.895 9.91 0.00 0.00 4.18
5820 8114 1.897398 GACCGTCAACATGCCACGTC 61.897 60.000 9.91 5.30 0.00 4.34
5821 8115 1.959226 GACCGTCAACATGCCACGT 60.959 57.895 9.91 0.00 0.00 4.49
5822 8116 2.677003 GGACCGTCAACATGCCACG 61.677 63.158 0.00 0.00 0.00 4.94
5823 8117 2.332654 GGGACCGTCAACATGCCAC 61.333 63.158 0.00 0.00 0.00 5.01
5824 8118 1.195442 TAGGGACCGTCAACATGCCA 61.195 55.000 0.00 0.00 0.00 4.92
5825 8119 0.180406 ATAGGGACCGTCAACATGCC 59.820 55.000 0.00 0.00 0.00 4.40
5826 8120 1.583054 GATAGGGACCGTCAACATGC 58.417 55.000 0.00 0.00 0.00 4.06
5827 8121 1.407618 TCGATAGGGACCGTCAACATG 59.592 52.381 0.00 0.00 0.00 3.21
5828 8122 1.771565 TCGATAGGGACCGTCAACAT 58.228 50.000 0.00 0.00 0.00 2.71
5829 8123 1.548081 TTCGATAGGGACCGTCAACA 58.452 50.000 0.00 0.00 0.00 3.33
5830 8124 2.537401 CTTTCGATAGGGACCGTCAAC 58.463 52.381 0.00 0.00 0.00 3.18
5831 8125 1.134907 GCTTTCGATAGGGACCGTCAA 60.135 52.381 5.00 0.00 0.00 3.18
5832 8126 0.458669 GCTTTCGATAGGGACCGTCA 59.541 55.000 5.00 0.00 0.00 4.35
5833 8127 0.249363 GGCTTTCGATAGGGACCGTC 60.249 60.000 5.00 0.00 0.00 4.79
5834 8128 0.686769 AGGCTTTCGATAGGGACCGT 60.687 55.000 5.00 0.00 0.00 4.83
5835 8129 0.464452 AAGGCTTTCGATAGGGACCG 59.536 55.000 5.00 0.00 0.00 4.79
5836 8130 2.545322 CGTAAGGCTTTCGATAGGGACC 60.545 54.545 19.77 0.00 0.00 4.46
5837 8131 2.740452 CGTAAGGCTTTCGATAGGGAC 58.260 52.381 19.77 0.79 0.00 4.46
5992 8286 7.282224 TGAAAGGTCAAATATGGTTTCGATAGG 59.718 37.037 0.00 0.00 30.31 2.57
6187 8481 2.608090 GGCTTGAATACCGTTAGAGTGC 59.392 50.000 0.00 0.00 0.00 4.40
6322 8617 1.702886 CGAGTCAAACGAGTCAGCAT 58.297 50.000 0.00 0.00 33.14 3.79
6952 9365 5.177326 ACTTGATGCAAACAAAAGCTTCAA 58.823 33.333 0.00 12.87 46.16 2.69
7057 9472 4.281435 TCCACATGTTTCACAATCATTGCT 59.719 37.500 0.00 0.00 0.00 3.91
7437 9857 5.590530 ATGTGTTAAACCAAAGACAGCAA 57.409 34.783 0.00 0.00 36.25 3.91
7438 9858 5.590530 AATGTGTTAAACCAAAGACAGCA 57.409 34.783 0.00 0.00 36.25 4.41
7439 9859 6.975772 TGTTAATGTGTTAAACCAAAGACAGC 59.024 34.615 0.00 0.00 36.25 4.40
7440 9860 8.918961 TTGTTAATGTGTTAAACCAAAGACAG 57.081 30.769 0.00 0.00 36.25 3.51
7651 10077 5.491973 TCAGTTTGTTACGCTACGTTTTTC 58.508 37.500 0.00 0.00 41.54 2.29
7867 10318 3.068165 GGTGATGACGGATCAGACATGTA 59.932 47.826 14.51 2.53 42.00 2.29
8043 10786 0.653636 CGTCTACTCTCGCCTCTCAC 59.346 60.000 0.00 0.00 0.00 3.51
8093 10836 1.605202 GGAATTTGCCGTGCATGTTGT 60.605 47.619 4.96 0.00 38.76 3.32
8097 10840 4.075997 CGGAATTTGCCGTGCATG 57.924 55.556 0.00 0.00 46.07 4.06
8104 10847 1.737236 GGCCATTTTTCGGAATTTGCC 59.263 47.619 0.00 0.00 31.23 4.52
8117 10860 6.661304 TTTTTGCATTTTTATGGGCCATTT 57.339 29.167 26.58 4.18 0.00 2.32
8219 10962 9.546909 GTCAGATACTTATCATTTGTGTTGTTG 57.453 33.333 0.00 0.00 35.17 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.