Multiple sequence alignment - TraesCS5A01G100300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G100300 chr5A 100.000 5243 0 0 1 5243 144383622 144388864 0.000000e+00 9683.0
1 TraesCS5A01G100300 chr5A 93.617 141 3 1 4814 4948 144388293 144388433 6.880000e-49 206.0
2 TraesCS5A01G100300 chr5A 93.617 141 3 1 4672 4812 144388435 144388569 6.880000e-49 206.0
3 TraesCS5A01G100300 chr5D 94.125 2264 71 21 2563 4812 129163815 129166030 0.000000e+00 3387.0
4 TraesCS5A01G100300 chr5D 93.937 2177 99 20 358 2514 129161642 129163805 0.000000e+00 3258.0
5 TraesCS5A01G100300 chr5D 86.592 179 15 7 5067 5243 129166742 129166913 6.930000e-44 189.0
6 TraesCS5A01G100300 chr5D 94.792 96 5 0 1 96 129155534 129155629 3.270000e-32 150.0
7 TraesCS5A01G100300 chr5B 95.507 2070 58 16 2761 4812 141453237 141455289 0.000000e+00 3275.0
8 TraesCS5A01G100300 chr5B 93.238 2233 89 26 516 2732 141451058 141453244 0.000000e+00 3230.0
9 TraesCS5A01G100300 chr5B 95.455 154 5 2 371 522 141448962 141449115 1.460000e-60 244.0
10 TraesCS5A01G100300 chr7B 82.900 269 31 7 4828 5082 540063192 540063459 1.470000e-55 228.0
11 TraesCS5A01G100300 chr7D 81.985 272 35 6 4826 5083 199607146 199606875 8.840000e-53 219.0
12 TraesCS5A01G100300 chr7D 82.375 261 33 5 4835 5082 485106460 485106720 1.140000e-51 215.0
13 TraesCS5A01G100300 chr2B 83.333 222 28 7 4878 5091 438744132 438743912 4.140000e-46 196.0
14 TraesCS5A01G100300 chr3B 83.333 216 26 6 4878 5088 80104463 80104673 1.930000e-44 191.0
15 TraesCS5A01G100300 chr2A 83.568 213 26 6 4878 5083 62388250 62388040 1.930000e-44 191.0
16 TraesCS5A01G100300 chr2A 84.416 77 12 0 4690 4766 349713664 349713740 5.630000e-10 76.8
17 TraesCS5A01G100300 chr1D 80.451 266 38 8 4835 5086 338927417 338927152 1.930000e-44 191.0
18 TraesCS5A01G100300 chr3D 83.028 218 24 8 4877 5088 50537841 50538051 8.970000e-43 185.0
19 TraesCS5A01G100300 chr4B 79.245 265 40 10 4833 5087 541907165 541907424 2.510000e-38 171.0
20 TraesCS5A01G100300 chr6B 82.353 85 14 1 4682 4766 122880281 122880198 7.280000e-09 73.1
21 TraesCS5A01G100300 chr2D 82.895 76 13 0 4691 4766 615022798 615022723 9.420000e-08 69.4
22 TraesCS5A01G100300 chr2D 94.444 36 2 0 4838 4873 615022793 615022758 7.330000e-04 56.5
23 TraesCS5A01G100300 chr3A 100.000 33 0 0 5134 5166 740038243 740038275 1.580000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G100300 chr5A 144383622 144388864 5242 False 3365.000000 9683 95.744667 1 5243 3 chr5A.!!$F1 5242
1 TraesCS5A01G100300 chr5D 129161642 129166913 5271 False 2278.000000 3387 91.551333 358 5243 3 chr5D.!!$F2 4885
2 TraesCS5A01G100300 chr5B 141448962 141455289 6327 False 2249.666667 3275 94.733333 371 4812 3 chr5B.!!$F1 4441

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
335 336 0.038526 CGTCAAACTCTAGCCACGGT 60.039 55.0 0.0 0.0 0.0 4.83 F
340 341 0.323957 AACTCTAGCCACGGTTTCCC 59.676 55.0 0.0 0.0 0.0 3.97 F
385 386 0.523072 CCACGGTTCTCCAATGCTTG 59.477 55.0 0.0 0.0 0.0 4.01 F
757 2716 0.624795 GTTTGATCCCTCCCCTCCCT 60.625 60.0 0.0 0.0 0.0 4.20 F
2736 4715 0.106719 CTTTCTGTGTGTGTGGGGGT 60.107 55.0 0.0 0.0 0.0 4.95 F
2737 4716 0.395036 TTTCTGTGTGTGTGGGGGTG 60.395 55.0 0.0 0.0 0.0 4.61 F
2964 4944 0.605589 GCAAGGGAGTACTTGGCGTT 60.606 55.0 0.0 0.0 46.1 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1795 3767 1.197492 CTAGCGCAACACATTCTTGCA 59.803 47.619 11.47 0.00 43.61 4.08 R
1796 3768 1.464608 TCTAGCGCAACACATTCTTGC 59.535 47.619 11.47 0.00 40.61 4.01 R
2250 4223 1.787012 GCACAATCCTGCCACAAAAG 58.213 50.000 0.00 0.00 0.00 2.27 R
2740 4719 0.167908 CACACACACACACACACACC 59.832 55.000 0.00 0.00 0.00 4.16 R
4137 6124 0.311477 GAGAGGATAAGTCGACCGCC 59.689 60.000 13.01 8.65 0.00 6.13 R
4167 6154 0.318441 CTCTTGTTCGTCCAGGAGCA 59.682 55.000 0.00 0.00 32.70 4.26 R
4421 6410 1.554160 CTCTGGCATGACTTCACCTCT 59.446 52.381 0.00 0.00 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 8.856490 CAATAACTATTGTGCATAGGGTTTTC 57.144 34.615 0.00 0.00 39.57 2.29
41 42 5.560966 AACTATTGTGCATAGGGTTTTCG 57.439 39.130 0.00 0.00 39.57 3.46
42 43 2.939460 ATTGTGCATAGGGTTTTCGC 57.061 45.000 0.00 0.00 0.00 4.70
43 44 1.610363 TTGTGCATAGGGTTTTCGCA 58.390 45.000 0.00 0.00 35.07 5.10
44 45 1.832883 TGTGCATAGGGTTTTCGCAT 58.167 45.000 0.00 0.00 34.66 4.73
45 46 1.472082 TGTGCATAGGGTTTTCGCATG 59.528 47.619 0.00 0.00 34.66 4.06
46 47 0.455410 TGCATAGGGTTTTCGCATGC 59.545 50.000 7.91 7.91 41.92 4.06
47 48 0.740737 GCATAGGGTTTTCGCATGCT 59.259 50.000 17.13 0.00 40.37 3.79
48 49 1.534595 GCATAGGGTTTTCGCATGCTG 60.535 52.381 17.13 9.63 40.37 4.41
49 50 2.016318 CATAGGGTTTTCGCATGCTGA 58.984 47.619 17.13 11.96 35.07 4.26
50 51 2.192664 TAGGGTTTTCGCATGCTGAA 57.807 45.000 17.13 17.15 35.07 3.02
51 52 1.549203 AGGGTTTTCGCATGCTGAAT 58.451 45.000 17.13 3.21 35.07 2.57
52 53 2.722094 AGGGTTTTCGCATGCTGAATA 58.278 42.857 17.13 12.62 35.07 1.75
53 54 3.290710 AGGGTTTTCGCATGCTGAATAT 58.709 40.909 17.13 3.55 35.07 1.28
54 55 4.460263 AGGGTTTTCGCATGCTGAATATA 58.540 39.130 17.13 3.90 35.07 0.86
55 56 4.887071 AGGGTTTTCGCATGCTGAATATAA 59.113 37.500 17.13 9.37 35.07 0.98
56 57 5.536161 AGGGTTTTCGCATGCTGAATATAAT 59.464 36.000 17.13 5.37 35.07 1.28
57 58 5.630680 GGGTTTTCGCATGCTGAATATAATG 59.369 40.000 17.13 0.00 0.00 1.90
58 59 5.117592 GGTTTTCGCATGCTGAATATAATGC 59.882 40.000 17.13 4.51 41.57 3.56
59 60 5.435820 TTTCGCATGCTGAATATAATGCA 57.564 34.783 17.13 0.00 44.47 3.96
60 61 5.435820 TTCGCATGCTGAATATAATGCAA 57.564 34.783 17.13 0.00 44.47 4.08
61 62 5.435820 TCGCATGCTGAATATAATGCAAA 57.564 34.783 17.13 0.00 44.47 3.68
62 63 5.454520 TCGCATGCTGAATATAATGCAAAG 58.545 37.500 17.13 0.00 44.47 2.77
63 64 5.239087 TCGCATGCTGAATATAATGCAAAGA 59.761 36.000 17.13 0.00 44.47 2.52
64 65 6.072342 TCGCATGCTGAATATAATGCAAAGAT 60.072 34.615 17.13 0.00 44.47 2.40
65 66 6.584942 CGCATGCTGAATATAATGCAAAGATT 59.415 34.615 17.13 0.00 44.47 2.40
66 67 7.201325 CGCATGCTGAATATAATGCAAAGATTC 60.201 37.037 17.13 11.04 44.47 2.52
67 68 7.597369 GCATGCTGAATATAATGCAAAGATTCA 59.403 33.333 11.37 16.82 43.84 2.57
68 69 9.471084 CATGCTGAATATAATGCAAAGATTCAA 57.529 29.630 17.81 9.05 36.40 2.69
70 71 9.872721 TGCTGAATATAATGCAAAGATTCAAAA 57.127 25.926 17.81 9.98 36.40 2.44
80 81 8.767478 ATGCAAAGATTCAAAAGACAATAAGG 57.233 30.769 0.00 0.00 0.00 2.69
81 82 7.950512 TGCAAAGATTCAAAAGACAATAAGGA 58.049 30.769 0.00 0.00 0.00 3.36
82 83 8.587608 TGCAAAGATTCAAAAGACAATAAGGAT 58.412 29.630 0.00 0.00 0.00 3.24
87 88 8.907885 AGATTCAAAAGACAATAAGGATAAGGC 58.092 33.333 0.00 0.00 0.00 4.35
88 89 6.677781 TCAAAAGACAATAAGGATAAGGCG 57.322 37.500 0.00 0.00 0.00 5.52
89 90 5.588648 TCAAAAGACAATAAGGATAAGGCGG 59.411 40.000 0.00 0.00 0.00 6.13
90 91 3.127425 AGACAATAAGGATAAGGCGGC 57.873 47.619 0.00 0.00 0.00 6.53
91 92 2.438021 AGACAATAAGGATAAGGCGGCA 59.562 45.455 13.08 0.00 0.00 5.69
92 93 3.118038 AGACAATAAGGATAAGGCGGCAA 60.118 43.478 13.08 0.00 0.00 4.52
93 94 3.214328 ACAATAAGGATAAGGCGGCAAG 58.786 45.455 13.08 0.00 0.00 4.01
94 95 2.554032 CAATAAGGATAAGGCGGCAAGG 59.446 50.000 13.08 0.00 0.00 3.61
95 96 1.502690 TAAGGATAAGGCGGCAAGGA 58.497 50.000 13.08 0.00 0.00 3.36
96 97 0.107165 AAGGATAAGGCGGCAAGGAC 60.107 55.000 13.08 0.00 0.00 3.85
97 98 1.887707 GGATAAGGCGGCAAGGACG 60.888 63.158 13.08 0.00 36.98 4.79
98 99 1.887707 GATAAGGCGGCAAGGACGG 60.888 63.158 13.08 0.00 32.98 4.79
99 100 2.306255 GATAAGGCGGCAAGGACGGA 62.306 60.000 13.08 0.00 32.98 4.69
100 101 1.696097 ATAAGGCGGCAAGGACGGAT 61.696 55.000 13.08 0.00 32.98 4.18
101 102 2.587322 TAAGGCGGCAAGGACGGATG 62.587 60.000 13.08 0.00 32.98 3.51
104 105 3.499737 CGGCAAGGACGGATGCAC 61.500 66.667 0.00 0.00 44.32 4.57
105 106 2.045926 GGCAAGGACGGATGCACT 60.046 61.111 0.00 0.00 44.32 4.40
106 107 2.109126 GGCAAGGACGGATGCACTC 61.109 63.158 0.00 0.00 44.32 3.51
107 108 2.109126 GCAAGGACGGATGCACTCC 61.109 63.158 0.00 0.00 42.12 3.85
115 116 2.927004 GGATGCACTCCGAAACACA 58.073 52.632 0.00 0.00 33.29 3.72
116 117 1.453155 GGATGCACTCCGAAACACAT 58.547 50.000 0.00 0.00 33.29 3.21
117 118 1.131126 GGATGCACTCCGAAACACATG 59.869 52.381 0.00 0.00 33.29 3.21
118 119 1.131126 GATGCACTCCGAAACACATGG 59.869 52.381 0.00 0.00 0.00 3.66
119 120 0.888736 TGCACTCCGAAACACATGGG 60.889 55.000 0.00 0.00 0.00 4.00
120 121 0.889186 GCACTCCGAAACACATGGGT 60.889 55.000 0.00 0.00 0.00 4.51
121 122 1.604604 CACTCCGAAACACATGGGTT 58.395 50.000 7.75 7.75 0.00 4.11
122 123 1.266718 CACTCCGAAACACATGGGTTG 59.733 52.381 15.51 3.65 0.00 3.77
123 124 1.142060 ACTCCGAAACACATGGGTTGA 59.858 47.619 15.51 6.64 0.00 3.18
124 125 1.535462 CTCCGAAACACATGGGTTGAC 59.465 52.381 15.51 10.87 0.00 3.18
125 126 0.596082 CCGAAACACATGGGTTGACC 59.404 55.000 15.51 6.11 40.81 4.02
135 136 3.191182 GGGTTGACCAATGCTAGGG 57.809 57.895 2.12 0.00 39.85 3.53
136 137 0.623723 GGGTTGACCAATGCTAGGGA 59.376 55.000 2.12 0.00 39.85 4.20
137 138 1.408822 GGGTTGACCAATGCTAGGGAG 60.409 57.143 2.12 0.00 39.85 4.30
138 139 1.559682 GGTTGACCAATGCTAGGGAGA 59.440 52.381 0.00 0.00 35.64 3.71
139 140 2.026262 GGTTGACCAATGCTAGGGAGAA 60.026 50.000 0.00 0.00 35.64 2.87
140 141 3.561313 GGTTGACCAATGCTAGGGAGAAA 60.561 47.826 0.00 0.00 35.64 2.52
141 142 4.273318 GTTGACCAATGCTAGGGAGAAAT 58.727 43.478 0.00 0.00 0.00 2.17
142 143 5.437060 GTTGACCAATGCTAGGGAGAAATA 58.563 41.667 0.00 0.00 0.00 1.40
143 144 5.296151 TGACCAATGCTAGGGAGAAATAG 57.704 43.478 0.00 0.00 0.00 1.73
144 145 4.968719 TGACCAATGCTAGGGAGAAATAGA 59.031 41.667 0.00 0.00 0.00 1.98
145 146 5.428457 TGACCAATGCTAGGGAGAAATAGAA 59.572 40.000 0.00 0.00 0.00 2.10
146 147 5.934781 ACCAATGCTAGGGAGAAATAGAAG 58.065 41.667 0.00 0.00 0.00 2.85
147 148 5.430089 ACCAATGCTAGGGAGAAATAGAAGT 59.570 40.000 0.00 0.00 0.00 3.01
148 149 6.615726 ACCAATGCTAGGGAGAAATAGAAGTA 59.384 38.462 0.00 0.00 0.00 2.24
149 150 7.158021 CCAATGCTAGGGAGAAATAGAAGTAG 58.842 42.308 0.00 0.00 0.00 2.57
150 151 7.015682 CCAATGCTAGGGAGAAATAGAAGTAGA 59.984 40.741 0.00 0.00 0.00 2.59
151 152 8.592809 CAATGCTAGGGAGAAATAGAAGTAGAT 58.407 37.037 0.00 0.00 0.00 1.98
152 153 9.830186 AATGCTAGGGAGAAATAGAAGTAGATA 57.170 33.333 0.00 0.00 0.00 1.98
154 155 9.249053 TGCTAGGGAGAAATAGAAGTAGATATG 57.751 37.037 0.00 0.00 0.00 1.78
155 156 9.469097 GCTAGGGAGAAATAGAAGTAGATATGA 57.531 37.037 0.00 0.00 0.00 2.15
190 191 6.385537 CTTGATAACAATTCAAGCAAGCAC 57.614 37.500 0.94 0.00 42.44 4.40
191 192 5.710513 TGATAACAATTCAAGCAAGCACT 57.289 34.783 0.00 0.00 0.00 4.40
192 193 6.816134 TGATAACAATTCAAGCAAGCACTA 57.184 33.333 0.00 0.00 0.00 2.74
193 194 7.395190 TGATAACAATTCAAGCAAGCACTAT 57.605 32.000 0.00 0.00 0.00 2.12
194 195 8.504812 TGATAACAATTCAAGCAAGCACTATA 57.495 30.769 0.00 0.00 0.00 1.31
195 196 9.123902 TGATAACAATTCAAGCAAGCACTATAT 57.876 29.630 0.00 0.00 0.00 0.86
199 200 8.915057 ACAATTCAAGCAAGCACTATATATCT 57.085 30.769 0.00 0.00 0.00 1.98
200 201 9.347240 ACAATTCAAGCAAGCACTATATATCTT 57.653 29.630 0.00 0.00 0.00 2.40
204 205 8.158169 TCAAGCAAGCACTATATATCTTTTGG 57.842 34.615 0.00 0.00 0.00 3.28
205 206 6.566197 AGCAAGCACTATATATCTTTTGGC 57.434 37.500 0.00 0.00 0.00 4.52
206 207 5.474876 AGCAAGCACTATATATCTTTTGGCC 59.525 40.000 0.00 0.00 0.00 5.36
207 208 5.241506 GCAAGCACTATATATCTTTTGGCCA 59.758 40.000 0.00 0.00 0.00 5.36
208 209 6.071728 GCAAGCACTATATATCTTTTGGCCAT 60.072 38.462 6.09 0.00 0.00 4.40
209 210 7.310664 CAAGCACTATATATCTTTTGGCCATG 58.689 38.462 6.09 0.00 0.00 3.66
210 211 6.782986 AGCACTATATATCTTTTGGCCATGA 58.217 36.000 6.09 6.13 0.00 3.07
211 212 6.656693 AGCACTATATATCTTTTGGCCATGAC 59.343 38.462 6.09 0.00 0.00 3.06
212 213 6.430925 GCACTATATATCTTTTGGCCATGACA 59.569 38.462 6.09 0.00 0.00 3.58
213 214 7.121759 GCACTATATATCTTTTGGCCATGACAT 59.878 37.037 6.09 2.95 0.00 3.06
214 215 9.671279 CACTATATATCTTTTGGCCATGACATA 57.329 33.333 6.09 5.32 0.00 2.29
218 219 9.758021 ATATATCTTTTGGCCATGACATAATCA 57.242 29.630 6.09 0.00 43.13 2.57
219 220 6.795144 ATCTTTTGGCCATGACATAATCAA 57.205 33.333 6.09 0.00 41.93 2.57
220 221 5.964758 TCTTTTGGCCATGACATAATCAAC 58.035 37.500 6.09 0.00 41.93 3.18
221 222 5.479724 TCTTTTGGCCATGACATAATCAACA 59.520 36.000 6.09 0.00 41.93 3.33
222 223 5.936187 TTTGGCCATGACATAATCAACAT 57.064 34.783 6.09 0.00 41.93 2.71
223 224 5.518848 TTGGCCATGACATAATCAACATC 57.481 39.130 6.09 0.00 41.93 3.06
224 225 4.795469 TGGCCATGACATAATCAACATCT 58.205 39.130 0.00 0.00 41.93 2.90
225 226 4.823442 TGGCCATGACATAATCAACATCTC 59.177 41.667 0.00 0.00 41.93 2.75
226 227 4.823442 GGCCATGACATAATCAACATCTCA 59.177 41.667 0.00 0.00 41.93 3.27
227 228 5.048921 GGCCATGACATAATCAACATCTCAG 60.049 44.000 0.00 0.00 41.93 3.35
228 229 5.530171 GCCATGACATAATCAACATCTCAGT 59.470 40.000 0.00 0.00 41.93 3.41
229 230 6.512903 GCCATGACATAATCAACATCTCAGTG 60.513 42.308 0.00 0.00 41.93 3.66
230 231 6.427974 CATGACATAATCAACATCTCAGTGC 58.572 40.000 0.00 0.00 41.93 4.40
231 232 4.877823 TGACATAATCAACATCTCAGTGCC 59.122 41.667 0.00 0.00 33.02 5.01
232 233 4.847198 ACATAATCAACATCTCAGTGCCA 58.153 39.130 0.00 0.00 0.00 4.92
233 234 5.255687 ACATAATCAACATCTCAGTGCCAA 58.744 37.500 0.00 0.00 0.00 4.52
234 235 5.711506 ACATAATCAACATCTCAGTGCCAAA 59.288 36.000 0.00 0.00 0.00 3.28
235 236 4.510038 AATCAACATCTCAGTGCCAAAC 57.490 40.909 0.00 0.00 0.00 2.93
236 237 2.929641 TCAACATCTCAGTGCCAAACA 58.070 42.857 0.00 0.00 0.00 2.83
237 238 3.489355 TCAACATCTCAGTGCCAAACAT 58.511 40.909 0.00 0.00 0.00 2.71
238 239 4.650734 TCAACATCTCAGTGCCAAACATA 58.349 39.130 0.00 0.00 0.00 2.29
239 240 5.255687 TCAACATCTCAGTGCCAAACATAT 58.744 37.500 0.00 0.00 0.00 1.78
240 241 6.413892 TCAACATCTCAGTGCCAAACATATA 58.586 36.000 0.00 0.00 0.00 0.86
241 242 7.056006 TCAACATCTCAGTGCCAAACATATAT 58.944 34.615 0.00 0.00 0.00 0.86
242 243 8.210265 TCAACATCTCAGTGCCAAACATATATA 58.790 33.333 0.00 0.00 0.00 0.86
243 244 8.839343 CAACATCTCAGTGCCAAACATATATAA 58.161 33.333 0.00 0.00 0.00 0.98
244 245 9.578576 AACATCTCAGTGCCAAACATATATAAT 57.421 29.630 0.00 0.00 0.00 1.28
245 246 9.578576 ACATCTCAGTGCCAAACATATATAATT 57.421 29.630 0.00 0.00 0.00 1.40
248 249 9.725019 TCTCAGTGCCAAACATATATAATTAGG 57.275 33.333 0.00 0.00 0.00 2.69
249 250 9.725019 CTCAGTGCCAAACATATATAATTAGGA 57.275 33.333 0.00 0.00 0.00 2.94
267 268 7.849804 ATTAGGAAATATATGCGGACATGAC 57.150 36.000 0.00 0.00 37.04 3.06
268 269 5.227569 AGGAAATATATGCGGACATGACA 57.772 39.130 0.00 0.00 37.04 3.58
269 270 4.997395 AGGAAATATATGCGGACATGACAC 59.003 41.667 0.00 0.00 37.04 3.67
270 271 4.997395 GGAAATATATGCGGACATGACACT 59.003 41.667 0.00 0.00 37.04 3.55
271 272 5.106948 GGAAATATATGCGGACATGACACTG 60.107 44.000 0.00 0.00 37.04 3.66
272 273 1.586422 ATATGCGGACATGACACTGC 58.414 50.000 0.00 7.87 37.04 4.40
273 274 2.425161 TGCGGACATGACACTGCA 59.575 55.556 16.74 16.74 44.50 4.41
274 275 1.227793 TGCGGACATGACACTGCAA 60.228 52.632 17.77 7.02 43.89 4.08
275 276 0.817229 TGCGGACATGACACTGCAAA 60.817 50.000 17.77 2.77 43.89 3.68
276 277 0.310543 GCGGACATGACACTGCAAAA 59.689 50.000 0.00 0.00 38.17 2.44
277 278 1.268999 GCGGACATGACACTGCAAAAA 60.269 47.619 0.00 0.00 38.17 1.94
278 279 2.653890 CGGACATGACACTGCAAAAAG 58.346 47.619 0.00 0.00 0.00 2.27
279 280 2.290367 CGGACATGACACTGCAAAAAGA 59.710 45.455 0.00 0.00 0.00 2.52
280 281 3.243035 CGGACATGACACTGCAAAAAGAA 60.243 43.478 0.00 0.00 0.00 2.52
281 282 4.044426 GGACATGACACTGCAAAAAGAAC 58.956 43.478 0.00 0.00 0.00 3.01
282 283 3.694734 ACATGACACTGCAAAAAGAACG 58.305 40.909 0.00 0.00 0.00 3.95
283 284 2.842208 TGACACTGCAAAAAGAACGG 57.158 45.000 0.00 0.00 0.00 4.44
284 285 1.202245 TGACACTGCAAAAAGAACGGC 60.202 47.619 0.00 0.00 0.00 5.68
285 286 0.248458 ACACTGCAAAAAGAACGGCG 60.248 50.000 4.80 4.80 0.00 6.46
286 287 1.299089 ACTGCAAAAAGAACGGCGC 60.299 52.632 6.90 0.00 0.00 6.53
287 288 2.352915 TGCAAAAAGAACGGCGCG 60.353 55.556 6.90 0.00 0.00 6.86
288 289 3.097114 GCAAAAAGAACGGCGCGG 61.097 61.111 14.03 14.03 0.00 6.46
289 290 2.634777 CAAAAAGAACGGCGCGGA 59.365 55.556 22.76 0.00 0.00 5.54
290 291 1.009449 CAAAAAGAACGGCGCGGAA 60.009 52.632 22.76 0.00 0.00 4.30
291 292 0.592754 CAAAAAGAACGGCGCGGAAA 60.593 50.000 22.76 0.00 0.00 3.13
292 293 0.317519 AAAAAGAACGGCGCGGAAAG 60.318 50.000 22.76 2.89 0.00 2.62
293 294 1.161563 AAAAGAACGGCGCGGAAAGA 61.162 50.000 22.76 0.00 0.00 2.52
294 295 1.161563 AAAGAACGGCGCGGAAAGAA 61.162 50.000 22.76 0.00 0.00 2.52
295 296 1.838568 AAGAACGGCGCGGAAAGAAC 61.839 55.000 22.76 5.95 0.00 3.01
296 297 3.624831 GAACGGCGCGGAAAGAACG 62.625 63.158 22.76 9.49 0.00 3.95
302 303 3.723348 GCGGAAAGAACGGCGCTT 61.723 61.111 6.90 0.00 0.00 4.68
303 304 2.474712 CGGAAAGAACGGCGCTTC 59.525 61.111 6.90 10.41 0.00 3.86
304 305 2.027625 CGGAAAGAACGGCGCTTCT 61.028 57.895 6.90 12.67 31.41 2.85
305 306 1.788481 GGAAAGAACGGCGCTTCTC 59.212 57.895 19.64 11.61 29.74 2.87
306 307 0.670854 GGAAAGAACGGCGCTTCTCT 60.671 55.000 19.64 10.35 29.74 3.10
307 308 1.403780 GGAAAGAACGGCGCTTCTCTA 60.404 52.381 19.64 0.00 29.74 2.43
308 309 1.921230 GAAAGAACGGCGCTTCTCTAG 59.079 52.381 19.64 0.00 29.74 2.43
309 310 0.458716 AAGAACGGCGCTTCTCTAGC 60.459 55.000 19.64 0.00 46.83 3.42
318 319 2.196295 GCTTCTCTAGCGTCATTCGT 57.804 50.000 0.00 0.00 40.71 3.85
319 320 2.113289 GCTTCTCTAGCGTCATTCGTC 58.887 52.381 0.00 0.00 40.71 4.20
320 321 2.478031 GCTTCTCTAGCGTCATTCGTCA 60.478 50.000 0.00 0.00 40.71 4.35
321 322 3.759418 CTTCTCTAGCGTCATTCGTCAA 58.241 45.455 0.00 0.00 42.13 3.18
322 323 3.842732 TCTCTAGCGTCATTCGTCAAA 57.157 42.857 0.00 0.00 42.13 2.69
323 324 3.499048 TCTCTAGCGTCATTCGTCAAAC 58.501 45.455 0.00 0.00 42.13 2.93
324 325 3.190744 TCTCTAGCGTCATTCGTCAAACT 59.809 43.478 0.00 0.00 42.13 2.66
325 326 3.499048 TCTAGCGTCATTCGTCAAACTC 58.501 45.455 0.00 0.00 42.13 3.01
326 327 2.440539 AGCGTCATTCGTCAAACTCT 57.559 45.000 0.00 0.00 42.13 3.24
327 328 3.570926 AGCGTCATTCGTCAAACTCTA 57.429 42.857 0.00 0.00 42.13 2.43
328 329 3.502920 AGCGTCATTCGTCAAACTCTAG 58.497 45.455 0.00 0.00 42.13 2.43
329 330 2.028165 GCGTCATTCGTCAAACTCTAGC 59.972 50.000 0.00 0.00 42.13 3.42
330 331 2.599082 CGTCATTCGTCAAACTCTAGCC 59.401 50.000 0.00 0.00 34.52 3.93
331 332 3.585862 GTCATTCGTCAAACTCTAGCCA 58.414 45.455 0.00 0.00 0.00 4.75
332 333 3.368236 GTCATTCGTCAAACTCTAGCCAC 59.632 47.826 0.00 0.00 0.00 5.01
333 334 2.060326 TTCGTCAAACTCTAGCCACG 57.940 50.000 0.00 0.00 0.00 4.94
334 335 0.242825 TCGTCAAACTCTAGCCACGG 59.757 55.000 0.00 0.00 0.00 4.94
335 336 0.038526 CGTCAAACTCTAGCCACGGT 60.039 55.000 0.00 0.00 0.00 4.83
336 337 1.604693 CGTCAAACTCTAGCCACGGTT 60.605 52.381 0.00 0.00 0.00 4.44
337 338 2.490991 GTCAAACTCTAGCCACGGTTT 58.509 47.619 0.00 0.00 32.99 3.27
338 339 2.479275 GTCAAACTCTAGCCACGGTTTC 59.521 50.000 0.00 0.00 30.78 2.78
339 340 1.804748 CAAACTCTAGCCACGGTTTCC 59.195 52.381 0.00 0.00 30.78 3.13
340 341 0.323957 AACTCTAGCCACGGTTTCCC 59.676 55.000 0.00 0.00 0.00 3.97
341 342 1.221021 CTCTAGCCACGGTTTCCCC 59.779 63.158 0.00 0.00 0.00 4.81
342 343 1.229400 TCTAGCCACGGTTTCCCCT 60.229 57.895 0.00 0.00 0.00 4.79
343 344 1.221021 CTAGCCACGGTTTCCCCTC 59.779 63.158 0.00 0.00 0.00 4.30
344 345 1.536907 TAGCCACGGTTTCCCCTCA 60.537 57.895 0.00 0.00 0.00 3.86
345 346 1.128809 TAGCCACGGTTTCCCCTCAA 61.129 55.000 0.00 0.00 0.00 3.02
346 347 1.529713 GCCACGGTTTCCCCTCAAA 60.530 57.895 0.00 0.00 0.00 2.69
347 348 1.110518 GCCACGGTTTCCCCTCAAAA 61.111 55.000 0.00 0.00 0.00 2.44
348 349 1.404843 CCACGGTTTCCCCTCAAAAA 58.595 50.000 0.00 0.00 0.00 1.94
385 386 0.523072 CCACGGTTCTCCAATGCTTG 59.477 55.000 0.00 0.00 0.00 4.01
398 399 2.943690 CAATGCTTGAGATGGACCTCAG 59.056 50.000 0.00 0.00 43.28 3.35
404 405 4.081420 GCTTGAGATGGACCTCAGACTTTA 60.081 45.833 0.00 0.00 43.28 1.85
571 2523 1.273606 AGACACAAGACCAGATCCACG 59.726 52.381 0.00 0.00 0.00 4.94
753 2712 2.001269 CCCGTTTGATCCCTCCCCT 61.001 63.158 0.00 0.00 0.00 4.79
756 2715 1.923586 GTTTGATCCCTCCCCTCCC 59.076 63.158 0.00 0.00 0.00 4.30
757 2716 0.624795 GTTTGATCCCTCCCCTCCCT 60.625 60.000 0.00 0.00 0.00 4.20
760 2719 3.462501 ATCCCTCCCCTCCCTCCC 61.463 72.222 0.00 0.00 0.00 4.30
866 2825 1.005347 CGACATTCATTACCGCGTTCC 60.005 52.381 4.92 0.00 0.00 3.62
927 2886 2.417936 GATCTCGTCGGGGAAGCC 59.582 66.667 0.00 0.00 0.00 4.35
941 2901 4.974721 AGCCAGGTTTGTGCCCGG 62.975 66.667 0.00 0.00 0.00 5.73
1136 3106 2.209064 TAGCCTGTCGTCCTCGTTGC 62.209 60.000 0.00 0.00 38.33 4.17
1303 3274 9.282247 CATTTGTCTATGCTCACTTTTATGAAC 57.718 33.333 0.00 0.00 0.00 3.18
1308 3279 5.886960 ATGCTCACTTTTATGAACAGGAC 57.113 39.130 0.00 0.00 28.66 3.85
1309 3280 3.745975 TGCTCACTTTTATGAACAGGACG 59.254 43.478 0.00 0.00 0.00 4.79
1460 3431 9.656323 ATTAGGCGGAGATTATATTAGGTATCA 57.344 33.333 0.00 0.00 0.00 2.15
1681 3653 8.100791 ACTGCCACTATTTCTTGTTCATAGTTA 58.899 33.333 0.00 0.00 32.44 2.24
1707 3679 6.406370 TGAAGTCACCACCTCTATTATGTTG 58.594 40.000 0.00 0.00 0.00 3.33
1711 3683 5.065218 GTCACCACCTCTATTATGTTGCTTG 59.935 44.000 0.00 0.00 0.00 4.01
1720 3692 9.023967 CCTCTATTATGTTGCTTGCAAATTAAC 57.976 33.333 9.75 6.86 0.00 2.01
1727 3699 7.551035 TGTTGCTTGCAAATTAACAAGATTT 57.449 28.000 19.38 0.00 44.89 2.17
1762 3734 3.196463 TGGCAACAGTTTTGCATCTTTG 58.804 40.909 15.49 0.00 46.17 2.77
1769 3741 2.053627 GTTTTGCATCTTTGTGGCGAG 58.946 47.619 0.00 0.00 0.00 5.03
1795 3767 6.068010 TCATGTTGGTTTTGGTAGAGATGTT 58.932 36.000 0.00 0.00 0.00 2.71
1796 3768 5.766150 TGTTGGTTTTGGTAGAGATGTTG 57.234 39.130 0.00 0.00 0.00 3.33
1816 3788 1.464608 GCAAGAATGTGTTGCGCTAGA 59.535 47.619 9.73 0.00 40.87 2.43
1826 3798 2.483877 TGTTGCGCTAGAATTGGAACAG 59.516 45.455 9.73 0.00 42.39 3.16
1930 3902 7.458409 ACTGTAGGTATAATGTATGGTACCG 57.542 40.000 7.57 0.00 41.11 4.02
1941 3913 3.133362 TGTATGGTACCGAATGACCTTCC 59.867 47.826 7.57 0.00 36.62 3.46
1969 3941 4.648626 TGGCTCACTGGCTGCACC 62.649 66.667 0.50 0.00 42.34 5.01
1988 3960 4.024302 GCACCAACTTACACCTACTGTTTC 60.024 45.833 0.00 0.00 33.91 2.78
1995 3967 6.885922 ACTTACACCTACTGTTTCCCATATC 58.114 40.000 0.00 0.00 33.91 1.63
2027 3999 6.396829 AATAATCTTTTCCCATGTAGCTGC 57.603 37.500 0.00 0.00 0.00 5.25
2029 4001 3.153369 TCTTTTCCCATGTAGCTGCAA 57.847 42.857 9.07 0.00 0.00 4.08
2042 4014 6.618287 TGTAGCTGCAATGTTTATCATACC 57.382 37.500 0.43 0.00 35.48 2.73
2052 4024 4.523083 TGTTTATCATACCAAGGAGCACC 58.477 43.478 0.00 0.00 0.00 5.01
2178 4151 7.233962 TGGACAAACTAACTCAGACTTGGTATA 59.766 37.037 0.00 0.00 0.00 1.47
2203 4176 5.596836 ACTTCTCATTTTTGTTCTTGCCA 57.403 34.783 0.00 0.00 0.00 4.92
2205 4178 6.585416 ACTTCTCATTTTTGTTCTTGCCATT 58.415 32.000 0.00 0.00 0.00 3.16
2206 4179 7.049754 ACTTCTCATTTTTGTTCTTGCCATTT 58.950 30.769 0.00 0.00 0.00 2.32
2242 4215 4.288366 TGGTTCTTAGTGGATGGTCATTCA 59.712 41.667 0.00 0.00 0.00 2.57
2250 4223 8.506168 TTAGTGGATGGTCATTCAACTATTTC 57.494 34.615 0.00 0.00 0.00 2.17
2304 4277 0.742281 CACAGCCTCCATCCAAGTCG 60.742 60.000 0.00 0.00 0.00 4.18
2320 4293 1.802960 AGTCGCACTCAGCAATTCTTG 59.197 47.619 0.00 0.00 46.13 3.02
2355 4328 4.273318 AGATATTGGTTGTTGAGAAGGGC 58.727 43.478 0.00 0.00 0.00 5.19
2356 4329 2.380064 ATTGGTTGTTGAGAAGGGCA 57.620 45.000 0.00 0.00 0.00 5.36
2430 4407 4.195416 CAAAGAGCTATCCTTCTTGGTCC 58.805 47.826 0.00 0.00 37.07 4.46
2687 4666 4.097589 GGTAACTGGTATCGTGTCTTAGCT 59.902 45.833 0.00 0.00 0.00 3.32
2725 4704 9.299963 CAGTAAATGTAGATCTCTCTTTCTGTG 57.700 37.037 0.00 0.00 32.66 3.66
2727 4706 9.081997 GTAAATGTAGATCTCTCTTTCTGTGTG 57.918 37.037 0.00 0.00 32.66 3.82
2728 4707 6.849085 ATGTAGATCTCTCTTTCTGTGTGT 57.151 37.500 0.00 0.00 32.66 3.72
2729 4708 6.018589 TGTAGATCTCTCTTTCTGTGTGTG 57.981 41.667 0.00 0.00 32.66 3.82
2730 4709 5.536538 TGTAGATCTCTCTTTCTGTGTGTGT 59.463 40.000 0.00 0.00 32.66 3.72
2731 4710 4.880759 AGATCTCTCTTTCTGTGTGTGTG 58.119 43.478 0.00 0.00 0.00 3.82
2732 4711 3.459232 TCTCTCTTTCTGTGTGTGTGG 57.541 47.619 0.00 0.00 0.00 4.17
2733 4712 2.103094 TCTCTCTTTCTGTGTGTGTGGG 59.897 50.000 0.00 0.00 0.00 4.61
2734 4713 1.140852 TCTCTTTCTGTGTGTGTGGGG 59.859 52.381 0.00 0.00 0.00 4.96
2735 4714 0.182537 TCTTTCTGTGTGTGTGGGGG 59.817 55.000 0.00 0.00 0.00 5.40
2736 4715 0.106719 CTTTCTGTGTGTGTGGGGGT 60.107 55.000 0.00 0.00 0.00 4.95
2737 4716 0.395036 TTTCTGTGTGTGTGGGGGTG 60.395 55.000 0.00 0.00 0.00 4.61
2738 4717 1.567208 TTCTGTGTGTGTGGGGGTGT 61.567 55.000 0.00 0.00 0.00 4.16
2739 4718 1.823470 CTGTGTGTGTGGGGGTGTG 60.823 63.158 0.00 0.00 0.00 3.82
2740 4719 2.518349 GTGTGTGTGGGGGTGTGG 60.518 66.667 0.00 0.00 0.00 4.17
2741 4720 3.814906 TGTGTGTGGGGGTGTGGG 61.815 66.667 0.00 0.00 0.00 4.61
2742 4721 3.816090 GTGTGTGGGGGTGTGGGT 61.816 66.667 0.00 0.00 0.00 4.51
2743 4722 3.814906 TGTGTGGGGGTGTGGGTG 61.815 66.667 0.00 0.00 0.00 4.61
2744 4723 3.816090 GTGTGGGGGTGTGGGTGT 61.816 66.667 0.00 0.00 0.00 4.16
2745 4724 3.814906 TGTGGGGGTGTGGGTGTG 61.815 66.667 0.00 0.00 0.00 3.82
2746 4725 3.816090 GTGGGGGTGTGGGTGTGT 61.816 66.667 0.00 0.00 0.00 3.72
2747 4726 3.814906 TGGGGGTGTGGGTGTGTG 61.815 66.667 0.00 0.00 0.00 3.82
2748 4727 3.816090 GGGGGTGTGGGTGTGTGT 61.816 66.667 0.00 0.00 0.00 3.72
2749 4728 2.518349 GGGGTGTGGGTGTGTGTG 60.518 66.667 0.00 0.00 0.00 3.82
2750 4729 2.274104 GGGTGTGGGTGTGTGTGT 59.726 61.111 0.00 0.00 0.00 3.72
2751 4730 2.118404 GGGTGTGGGTGTGTGTGTG 61.118 63.158 0.00 0.00 0.00 3.82
2788 4767 4.885907 GTGTAGCACAGGGTATAGTAGACA 59.114 45.833 0.00 0.00 34.08 3.41
2789 4768 4.885907 TGTAGCACAGGGTATAGTAGACAC 59.114 45.833 0.00 0.00 0.00 3.67
2790 4769 4.252570 AGCACAGGGTATAGTAGACACT 57.747 45.455 0.00 0.00 38.91 3.55
2964 4944 0.605589 GCAAGGGAGTACTTGGCGTT 60.606 55.000 0.00 0.00 46.10 4.84
3018 4998 0.872388 GTGTTGGTAAAGGGACGCTG 59.128 55.000 0.00 0.00 0.00 5.18
3047 5027 7.038799 AGCAAAATTGATGAAAGAGTACCCATT 60.039 33.333 0.00 0.00 0.00 3.16
3150 5130 8.219908 CTGGAAGAAGCAAGATGGAACAAGAC 62.220 46.154 0.00 0.00 38.23 3.01
3237 5217 5.466728 TGAAGCAGTTGAATCTGTTACTGAC 59.533 40.000 0.00 0.00 40.24 3.51
3605 5585 4.766404 ACAAATCCAAAAGCGTCTAAGG 57.234 40.909 0.00 0.00 0.00 2.69
3665 5645 6.643770 CAGGTCTTTTTGATCATCTTTTGGTG 59.356 38.462 0.00 0.00 0.00 4.17
3681 5661 8.421249 TCTTTTGGTGAATGATAACCTTGAAT 57.579 30.769 0.00 0.00 37.36 2.57
3961 5945 0.984230 TCGAGGATGGGAAAGCAACT 59.016 50.000 0.00 0.00 0.00 3.16
4079 6066 1.488812 TGCCCCTTCTATGTATTGCGT 59.511 47.619 0.00 0.00 0.00 5.24
4128 6115 3.974401 ACTCGTGCATGTTCGAATTTTTG 59.026 39.130 0.00 0.00 35.69 2.44
4137 6124 4.954238 GTTCGAATTTTTGAACAGGCTG 57.046 40.909 14.16 14.16 46.24 4.85
4167 6154 3.245803 ACTTATCCTCTCTCACAGGTGGT 60.246 47.826 0.00 0.00 32.20 4.16
4280 6267 2.717580 ACGATGTCGCAGAAGTGTTA 57.282 45.000 1.77 0.00 44.43 2.41
4421 6410 6.588373 GCTTTGTTTGTTCTTTGTACCAGAAA 59.412 34.615 6.24 0.00 31.98 2.52
4515 6504 3.176924 ACATATGTCGAGGGCCTATCT 57.823 47.619 5.73 0.00 0.00 1.98
4670 6660 3.960102 TCAGAACTTGCCTTTGTGGAAAT 59.040 39.130 0.00 0.00 38.35 2.17
4717 6713 8.949177 GTACTCCCTCCGTTTTTATTTATTTCA 58.051 33.333 0.00 0.00 0.00 2.69
4755 6751 7.140522 ACCTAGGTCAAACTTGGTAAACTTA 57.859 36.000 9.21 0.00 43.25 2.24
4762 6758 8.290325 GGTCAAACTTGGTAAACTTAGATCAAG 58.710 37.037 0.00 0.00 40.38 3.02
4820 6816 7.506114 TCTATGGTATGAAAATACTGTGACCC 58.494 38.462 0.00 0.00 0.00 4.46
4821 6817 5.772393 TGGTATGAAAATACTGTGACCCT 57.228 39.130 0.00 0.00 0.00 4.34
4822 6818 5.496556 TGGTATGAAAATACTGTGACCCTG 58.503 41.667 0.00 0.00 0.00 4.45
4823 6819 5.013704 TGGTATGAAAATACTGTGACCCTGT 59.986 40.000 0.00 0.00 0.00 4.00
4824 6820 5.944007 GGTATGAAAATACTGTGACCCTGTT 59.056 40.000 0.00 0.00 0.00 3.16
4825 6821 6.093633 GGTATGAAAATACTGTGACCCTGTTC 59.906 42.308 0.00 0.00 0.00 3.18
4826 6822 5.304686 TGAAAATACTGTGACCCTGTTCT 57.695 39.130 0.00 0.00 0.00 3.01
4827 6823 6.428083 TGAAAATACTGTGACCCTGTTCTA 57.572 37.500 0.00 0.00 0.00 2.10
4828 6824 6.228258 TGAAAATACTGTGACCCTGTTCTAC 58.772 40.000 0.00 0.00 0.00 2.59
4829 6825 5.818678 AAATACTGTGACCCTGTTCTACA 57.181 39.130 0.00 0.00 0.00 2.74
4830 6826 4.803098 ATACTGTGACCCTGTTCTACAC 57.197 45.455 0.00 0.00 0.00 2.90
4831 6827 2.394632 ACTGTGACCCTGTTCTACACA 58.605 47.619 0.00 0.00 38.78 3.72
4832 6828 2.972713 ACTGTGACCCTGTTCTACACAT 59.027 45.455 0.00 0.00 39.97 3.21
4833 6829 3.006967 ACTGTGACCCTGTTCTACACATC 59.993 47.826 0.00 0.00 39.97 3.06
4834 6830 3.239449 TGTGACCCTGTTCTACACATCT 58.761 45.455 0.00 0.00 36.72 2.90
4835 6831 4.412843 TGTGACCCTGTTCTACACATCTA 58.587 43.478 0.00 0.00 36.72 1.98
4836 6832 4.219944 TGTGACCCTGTTCTACACATCTAC 59.780 45.833 0.00 0.00 36.72 2.59
4837 6833 4.463186 GTGACCCTGTTCTACACATCTACT 59.537 45.833 0.00 0.00 33.76 2.57
4838 6834 4.705507 TGACCCTGTTCTACACATCTACTC 59.294 45.833 0.00 0.00 33.76 2.59
4839 6835 4.024670 ACCCTGTTCTACACATCTACTCC 58.975 47.826 0.00 0.00 33.76 3.85
4840 6836 3.385111 CCCTGTTCTACACATCTACTCCC 59.615 52.174 0.00 0.00 33.76 4.30
4841 6837 4.282496 CCTGTTCTACACATCTACTCCCT 58.718 47.826 0.00 0.00 33.76 4.20
4842 6838 4.339814 CCTGTTCTACACATCTACTCCCTC 59.660 50.000 0.00 0.00 33.76 4.30
4843 6839 4.279145 TGTTCTACACATCTACTCCCTCC 58.721 47.826 0.00 0.00 0.00 4.30
4844 6840 3.210232 TCTACACATCTACTCCCTCCG 57.790 52.381 0.00 0.00 0.00 4.63
4845 6841 2.508716 TCTACACATCTACTCCCTCCGT 59.491 50.000 0.00 0.00 0.00 4.69
4846 6842 2.233305 ACACATCTACTCCCTCCGTT 57.767 50.000 0.00 0.00 0.00 4.44
4847 6843 2.537143 ACACATCTACTCCCTCCGTTT 58.463 47.619 0.00 0.00 0.00 3.60
4848 6844 2.904434 ACACATCTACTCCCTCCGTTTT 59.096 45.455 0.00 0.00 0.00 2.43
4849 6845 3.326880 ACACATCTACTCCCTCCGTTTTT 59.673 43.478 0.00 0.00 0.00 1.94
4850 6846 4.529377 ACACATCTACTCCCTCCGTTTTTA 59.471 41.667 0.00 0.00 0.00 1.52
4851 6847 5.189145 ACACATCTACTCCCTCCGTTTTTAT 59.811 40.000 0.00 0.00 0.00 1.40
4852 6848 6.113411 CACATCTACTCCCTCCGTTTTTATT 58.887 40.000 0.00 0.00 0.00 1.40
4853 6849 6.598064 CACATCTACTCCCTCCGTTTTTATTT 59.402 38.462 0.00 0.00 0.00 1.40
4854 6850 7.767198 CACATCTACTCCCTCCGTTTTTATTTA 59.233 37.037 0.00 0.00 0.00 1.40
4855 6851 8.491958 ACATCTACTCCCTCCGTTTTTATTTAT 58.508 33.333 0.00 0.00 0.00 1.40
4856 6852 9.338622 CATCTACTCCCTCCGTTTTTATTTATT 57.661 33.333 0.00 0.00 0.00 1.40
4857 6853 9.916360 ATCTACTCCCTCCGTTTTTATTTATTT 57.084 29.630 0.00 0.00 0.00 1.40
4858 6854 9.387257 TCTACTCCCTCCGTTTTTATTTATTTC 57.613 33.333 0.00 0.00 0.00 2.17
4859 6855 9.169592 CTACTCCCTCCGTTTTTATTTATTTCA 57.830 33.333 0.00 0.00 0.00 2.69
4860 6856 7.823665 ACTCCCTCCGTTTTTATTTATTTCAC 58.176 34.615 0.00 0.00 0.00 3.18
4861 6857 7.449086 ACTCCCTCCGTTTTTATTTATTTCACA 59.551 33.333 0.00 0.00 0.00 3.58
4862 6858 8.356000 TCCCTCCGTTTTTATTTATTTCACAT 57.644 30.769 0.00 0.00 0.00 3.21
4863 6859 9.463902 TCCCTCCGTTTTTATTTATTTCACATA 57.536 29.630 0.00 0.00 0.00 2.29
4880 6876 8.918202 TTTCACATATGAACTTTGACCTAACT 57.082 30.769 10.38 0.00 44.66 2.24
4881 6877 8.918202 TTCACATATGAACTTTGACCTAACTT 57.082 30.769 10.38 0.00 40.01 2.66
4882 6878 8.918202 TCACATATGAACTTTGACCTAACTTT 57.082 30.769 10.38 0.00 0.00 2.66
4883 6879 8.783093 TCACATATGAACTTTGACCTAACTTTG 58.217 33.333 10.38 0.00 0.00 2.77
4884 6880 8.567948 CACATATGAACTTTGACCTAACTTTGT 58.432 33.333 10.38 0.00 0.00 2.83
4885 6881 9.787435 ACATATGAACTTTGACCTAACTTTGTA 57.213 29.630 10.38 0.00 0.00 2.41
4889 6885 8.570068 TGAACTTTGACCTAACTTTGTAAACT 57.430 30.769 0.00 0.00 0.00 2.66
4890 6886 9.016438 TGAACTTTGACCTAACTTTGTAAACTT 57.984 29.630 0.00 0.00 0.00 2.66
4893 6889 9.895138 ACTTTGACCTAACTTTGTAAACTTAGA 57.105 29.630 0.00 0.00 0.00 2.10
4981 6977 8.081633 TGATGATTTTATTGGTATCGATTTGGC 58.918 33.333 1.71 0.00 0.00 4.52
4996 6992 4.562394 CGATTTGGCATTGTGGATGTTAAC 59.438 41.667 0.00 0.00 38.07 2.01
4997 6993 3.567576 TTGGCATTGTGGATGTTAACG 57.432 42.857 0.26 0.00 38.07 3.18
5003 6999 5.107645 GGCATTGTGGATGTTAACGTTTTTC 60.108 40.000 5.91 0.00 38.07 2.29
5004 7000 5.107645 GCATTGTGGATGTTAACGTTTTTCC 60.108 40.000 5.91 8.68 38.07 3.13
5005 7001 4.571372 TGTGGATGTTAACGTTTTTCCC 57.429 40.909 5.91 2.84 0.00 3.97
5012 7099 9.245481 TGGATGTTAACGTTTTTCCCTATAAAT 57.755 29.630 5.91 0.00 0.00 1.40
5017 7104 8.649841 GTTAACGTTTTTCCCTATAAATTTGGC 58.350 33.333 5.91 0.00 0.00 4.52
5046 7133 6.661805 AGTTTAGAAGTTTGACCCAAGACAAA 59.338 34.615 0.00 0.00 35.70 2.83
5051 7138 4.532834 AGTTTGACCCAAGACAAAGCTAA 58.467 39.130 0.00 0.00 38.11 3.09
5052 7139 5.140454 AGTTTGACCCAAGACAAAGCTAAT 58.860 37.500 0.00 0.00 38.11 1.73
5062 7149 6.403636 CCAAGACAAAGCTAATATGCGAAGTT 60.404 38.462 0.00 0.00 38.13 2.66
5065 7152 7.685594 AGACAAAGCTAATATGCGAAGTTAAC 58.314 34.615 0.00 0.00 38.13 2.01
5069 7156 6.978343 AGCTAATATGCGAAGTTAACACAA 57.022 33.333 8.61 0.00 38.13 3.33
5072 7159 6.192137 GCTAATATGCGAAGTTAACACAAACG 59.808 38.462 8.61 6.91 34.46 3.60
5073 7160 2.741122 TGCGAAGTTAACACAAACGG 57.259 45.000 8.61 0.00 34.46 4.44
5075 7162 2.285756 TGCGAAGTTAACACAAACGGAG 59.714 45.455 8.61 0.00 34.46 4.63
5077 7164 2.222445 CGAAGTTAACACAAACGGAGGG 59.778 50.000 8.61 0.00 34.46 4.30
5079 7166 3.121738 AGTTAACACAAACGGAGGGAG 57.878 47.619 8.61 0.00 34.46 4.30
5080 7167 2.436911 AGTTAACACAAACGGAGGGAGT 59.563 45.455 8.61 0.00 34.46 3.85
5081 7168 3.642848 AGTTAACACAAACGGAGGGAGTA 59.357 43.478 8.61 0.00 34.46 2.59
5082 7169 4.285260 AGTTAACACAAACGGAGGGAGTAT 59.715 41.667 8.61 0.00 34.46 2.12
5083 7170 5.481473 AGTTAACACAAACGGAGGGAGTATA 59.519 40.000 8.61 0.00 34.46 1.47
5084 7171 6.155737 AGTTAACACAAACGGAGGGAGTATAT 59.844 38.462 8.61 0.00 34.46 0.86
5088 7175 5.659971 ACACAAACGGAGGGAGTATATTAGT 59.340 40.000 0.00 0.00 0.00 2.24
5090 7177 7.342799 ACACAAACGGAGGGAGTATATTAGTAA 59.657 37.037 0.00 0.00 0.00 2.24
5091 7178 8.199449 CACAAACGGAGGGAGTATATTAGTAAA 58.801 37.037 0.00 0.00 0.00 2.01
5092 7179 8.931568 ACAAACGGAGGGAGTATATTAGTAAAT 58.068 33.333 0.00 0.00 0.00 1.40
5095 7182 8.291191 ACGGAGGGAGTATATTAGTAAATAGC 57.709 38.462 0.00 0.00 31.18 2.97
5096 7183 7.066766 ACGGAGGGAGTATATTAGTAAATAGCG 59.933 40.741 0.00 0.00 31.18 4.26
5097 7184 7.201835 GGAGGGAGTATATTAGTAAATAGCGC 58.798 42.308 0.00 0.00 31.18 5.92
5185 7773 6.665465 GTTTAGCAGTGATCTAAACGGTTTT 58.335 36.000 11.87 0.00 43.05 2.43
5186 7774 7.799784 GTTTAGCAGTGATCTAAACGGTTTTA 58.200 34.615 11.87 1.24 43.05 1.52
5187 7775 8.448615 GTTTAGCAGTGATCTAAACGGTTTTAT 58.551 33.333 11.87 6.18 43.05 1.40
5188 7776 9.656040 TTTAGCAGTGATCTAAACGGTTTTATA 57.344 29.630 11.87 0.00 32.78 0.98
5189 7777 9.826574 TTAGCAGTGATCTAAACGGTTTTATAT 57.173 29.630 11.87 3.39 0.00 0.86
5190 7778 8.732746 AGCAGTGATCTAAACGGTTTTATATT 57.267 30.769 11.87 0.00 0.00 1.28
5191 7779 9.174166 AGCAGTGATCTAAACGGTTTTATATTT 57.826 29.630 11.87 0.00 0.00 1.40
5192 7780 9.783256 GCAGTGATCTAAACGGTTTTATATTTT 57.217 29.630 11.87 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 7.643764 CGAAAACCCTATGCACAATAGTTATTG 59.356 37.037 9.70 9.70 46.41 1.90
16 17 7.681065 GCGAAAACCCTATGCACAATAGTTATT 60.681 37.037 0.00 0.00 37.18 1.40
17 18 6.238648 GCGAAAACCCTATGCACAATAGTTAT 60.239 38.462 0.00 0.00 37.18 1.89
18 19 5.065474 GCGAAAACCCTATGCACAATAGTTA 59.935 40.000 0.00 0.00 37.18 2.24
19 20 4.142469 GCGAAAACCCTATGCACAATAGTT 60.142 41.667 0.00 0.00 37.18 2.24
20 21 3.377172 GCGAAAACCCTATGCACAATAGT 59.623 43.478 0.00 0.00 37.18 2.12
21 22 3.376859 TGCGAAAACCCTATGCACAATAG 59.623 43.478 0.00 0.00 38.44 1.73
22 23 3.348119 TGCGAAAACCCTATGCACAATA 58.652 40.909 0.00 0.00 0.00 1.90
23 24 2.166829 TGCGAAAACCCTATGCACAAT 58.833 42.857 0.00 0.00 0.00 2.71
24 25 1.610363 TGCGAAAACCCTATGCACAA 58.390 45.000 0.00 0.00 0.00 3.33
25 26 1.472082 CATGCGAAAACCCTATGCACA 59.528 47.619 0.00 0.00 38.54 4.57
26 27 1.798813 GCATGCGAAAACCCTATGCAC 60.799 52.381 0.00 0.00 42.63 4.57
27 28 0.455410 GCATGCGAAAACCCTATGCA 59.545 50.000 0.00 0.00 42.63 3.96
28 29 0.740737 AGCATGCGAAAACCCTATGC 59.259 50.000 13.01 0.00 43.23 3.14
29 30 2.016318 TCAGCATGCGAAAACCCTATG 58.984 47.619 13.01 0.62 34.76 2.23
30 31 2.418368 TCAGCATGCGAAAACCCTAT 57.582 45.000 13.01 0.00 34.76 2.57
31 32 2.192664 TTCAGCATGCGAAAACCCTA 57.807 45.000 18.29 0.00 34.76 3.53
32 33 1.549203 ATTCAGCATGCGAAAACCCT 58.451 45.000 22.36 8.55 34.76 4.34
33 34 3.715628 ATATTCAGCATGCGAAAACCC 57.284 42.857 22.36 0.00 34.76 4.11
34 35 5.117592 GCATTATATTCAGCATGCGAAAACC 59.882 40.000 22.36 9.01 33.19 3.27
35 36 5.686841 TGCATTATATTCAGCATGCGAAAAC 59.313 36.000 22.36 11.33 44.22 2.43
36 37 5.829829 TGCATTATATTCAGCATGCGAAAA 58.170 33.333 22.36 14.54 44.22 2.29
37 38 5.435820 TGCATTATATTCAGCATGCGAAA 57.564 34.783 22.36 16.66 44.22 3.46
38 39 5.435820 TTGCATTATATTCAGCATGCGAA 57.564 34.783 21.32 21.32 44.22 4.70
39 40 5.239087 TCTTTGCATTATATTCAGCATGCGA 59.761 36.000 13.01 10.08 44.22 5.10
40 41 5.454520 TCTTTGCATTATATTCAGCATGCG 58.545 37.500 13.01 7.64 44.22 4.73
41 42 7.597369 TGAATCTTTGCATTATATTCAGCATGC 59.403 33.333 10.51 10.51 42.07 4.06
42 43 9.471084 TTGAATCTTTGCATTATATTCAGCATG 57.529 29.630 11.62 0.00 37.72 4.06
44 45 9.872721 TTTTGAATCTTTGCATTATATTCAGCA 57.127 25.926 11.62 0.00 37.72 4.41
54 55 9.211485 CCTTATTGTCTTTTGAATCTTTGCATT 57.789 29.630 0.00 0.00 0.00 3.56
55 56 8.587608 TCCTTATTGTCTTTTGAATCTTTGCAT 58.412 29.630 0.00 0.00 0.00 3.96
56 57 7.950512 TCCTTATTGTCTTTTGAATCTTTGCA 58.049 30.769 0.00 0.00 0.00 4.08
57 58 8.992835 ATCCTTATTGTCTTTTGAATCTTTGC 57.007 30.769 0.00 0.00 0.00 3.68
61 62 8.907885 GCCTTATCCTTATTGTCTTTTGAATCT 58.092 33.333 0.00 0.00 0.00 2.40
62 63 7.857885 CGCCTTATCCTTATTGTCTTTTGAATC 59.142 37.037 0.00 0.00 0.00 2.52
63 64 7.201821 CCGCCTTATCCTTATTGTCTTTTGAAT 60.202 37.037 0.00 0.00 0.00 2.57
64 65 6.094881 CCGCCTTATCCTTATTGTCTTTTGAA 59.905 38.462 0.00 0.00 0.00 2.69
65 66 5.588648 CCGCCTTATCCTTATTGTCTTTTGA 59.411 40.000 0.00 0.00 0.00 2.69
66 67 5.733373 GCCGCCTTATCCTTATTGTCTTTTG 60.733 44.000 0.00 0.00 0.00 2.44
67 68 4.338400 GCCGCCTTATCCTTATTGTCTTTT 59.662 41.667 0.00 0.00 0.00 2.27
68 69 3.883489 GCCGCCTTATCCTTATTGTCTTT 59.117 43.478 0.00 0.00 0.00 2.52
69 70 3.118038 TGCCGCCTTATCCTTATTGTCTT 60.118 43.478 0.00 0.00 0.00 3.01
70 71 2.438021 TGCCGCCTTATCCTTATTGTCT 59.562 45.455 0.00 0.00 0.00 3.41
71 72 2.846193 TGCCGCCTTATCCTTATTGTC 58.154 47.619 0.00 0.00 0.00 3.18
72 73 3.214328 CTTGCCGCCTTATCCTTATTGT 58.786 45.455 0.00 0.00 0.00 2.71
73 74 2.554032 CCTTGCCGCCTTATCCTTATTG 59.446 50.000 0.00 0.00 0.00 1.90
74 75 2.441750 TCCTTGCCGCCTTATCCTTATT 59.558 45.455 0.00 0.00 0.00 1.40
75 76 2.054799 TCCTTGCCGCCTTATCCTTAT 58.945 47.619 0.00 0.00 0.00 1.73
76 77 1.140252 GTCCTTGCCGCCTTATCCTTA 59.860 52.381 0.00 0.00 0.00 2.69
77 78 0.107165 GTCCTTGCCGCCTTATCCTT 60.107 55.000 0.00 0.00 0.00 3.36
78 79 1.527370 GTCCTTGCCGCCTTATCCT 59.473 57.895 0.00 0.00 0.00 3.24
79 80 1.887707 CGTCCTTGCCGCCTTATCC 60.888 63.158 0.00 0.00 0.00 2.59
80 81 1.887707 CCGTCCTTGCCGCCTTATC 60.888 63.158 0.00 0.00 0.00 1.75
81 82 1.696097 ATCCGTCCTTGCCGCCTTAT 61.696 55.000 0.00 0.00 0.00 1.73
82 83 2.363975 ATCCGTCCTTGCCGCCTTA 61.364 57.895 0.00 0.00 0.00 2.69
83 84 3.717294 ATCCGTCCTTGCCGCCTT 61.717 61.111 0.00 0.00 0.00 4.35
84 85 4.473520 CATCCGTCCTTGCCGCCT 62.474 66.667 0.00 0.00 0.00 5.52
87 88 3.499737 GTGCATCCGTCCTTGCCG 61.500 66.667 0.00 0.00 38.08 5.69
88 89 2.045926 AGTGCATCCGTCCTTGCC 60.046 61.111 0.00 0.00 38.08 4.52
89 90 2.109126 GGAGTGCATCCGTCCTTGC 61.109 63.158 0.00 0.00 38.67 4.01
90 91 4.208632 GGAGTGCATCCGTCCTTG 57.791 61.111 0.00 0.00 38.67 3.61
97 98 1.131126 CATGTGTTTCGGAGTGCATCC 59.869 52.381 0.00 0.00 45.64 3.51
98 99 1.131126 CCATGTGTTTCGGAGTGCATC 59.869 52.381 0.00 0.00 0.00 3.91
99 100 1.167851 CCATGTGTTTCGGAGTGCAT 58.832 50.000 0.00 0.00 0.00 3.96
100 101 0.888736 CCCATGTGTTTCGGAGTGCA 60.889 55.000 0.00 0.00 0.00 4.57
101 102 0.889186 ACCCATGTGTTTCGGAGTGC 60.889 55.000 0.00 0.00 0.00 4.40
102 103 1.266718 CAACCCATGTGTTTCGGAGTG 59.733 52.381 0.00 0.00 0.00 3.51
103 104 1.142060 TCAACCCATGTGTTTCGGAGT 59.858 47.619 0.00 0.00 0.00 3.85
104 105 1.535462 GTCAACCCATGTGTTTCGGAG 59.465 52.381 0.00 0.00 0.00 4.63
105 106 1.600023 GTCAACCCATGTGTTTCGGA 58.400 50.000 0.00 0.00 0.00 4.55
106 107 0.596082 GGTCAACCCATGTGTTTCGG 59.404 55.000 0.00 0.00 0.00 4.30
107 108 1.313772 TGGTCAACCCATGTGTTTCG 58.686 50.000 0.00 0.00 38.72 3.46
108 109 3.652274 CATTGGTCAACCCATGTGTTTC 58.348 45.455 5.32 0.00 44.74 2.78
109 110 2.224257 GCATTGGTCAACCCATGTGTTT 60.224 45.455 13.14 0.00 44.74 2.83
110 111 1.344114 GCATTGGTCAACCCATGTGTT 59.656 47.619 13.14 0.00 44.74 3.32
111 112 0.968405 GCATTGGTCAACCCATGTGT 59.032 50.000 13.14 0.00 44.74 3.72
112 113 1.259609 AGCATTGGTCAACCCATGTG 58.740 50.000 13.14 1.83 44.74 3.21
113 114 2.621407 CCTAGCATTGGTCAACCCATGT 60.621 50.000 13.14 4.98 44.74 3.21
114 115 2.026641 CCTAGCATTGGTCAACCCATG 58.973 52.381 8.52 8.52 44.74 3.66
115 116 1.063717 CCCTAGCATTGGTCAACCCAT 60.064 52.381 0.00 0.00 44.74 4.00
116 117 0.331278 CCCTAGCATTGGTCAACCCA 59.669 55.000 0.00 0.00 43.27 4.51
117 118 0.623723 TCCCTAGCATTGGTCAACCC 59.376 55.000 0.00 0.00 34.29 4.11
118 119 1.559682 TCTCCCTAGCATTGGTCAACC 59.440 52.381 0.00 0.00 0.00 3.77
119 120 3.350219 TTCTCCCTAGCATTGGTCAAC 57.650 47.619 0.00 0.00 0.00 3.18
120 121 4.591321 ATTTCTCCCTAGCATTGGTCAA 57.409 40.909 0.00 0.00 0.00 3.18
121 122 4.968719 TCTATTTCTCCCTAGCATTGGTCA 59.031 41.667 0.00 0.00 0.00 4.02
122 123 5.552870 TCTATTTCTCCCTAGCATTGGTC 57.447 43.478 0.00 0.00 0.00 4.02
123 124 5.430089 ACTTCTATTTCTCCCTAGCATTGGT 59.570 40.000 0.00 0.00 0.00 3.67
124 125 5.934781 ACTTCTATTTCTCCCTAGCATTGG 58.065 41.667 0.00 0.00 0.00 3.16
125 126 7.957002 TCTACTTCTATTTCTCCCTAGCATTG 58.043 38.462 0.00 0.00 0.00 2.82
126 127 8.734593 ATCTACTTCTATTTCTCCCTAGCATT 57.265 34.615 0.00 0.00 0.00 3.56
128 129 9.249053 CATATCTACTTCTATTTCTCCCTAGCA 57.751 37.037 0.00 0.00 0.00 3.49
129 130 9.469097 TCATATCTACTTCTATTTCTCCCTAGC 57.531 37.037 0.00 0.00 0.00 3.42
168 169 6.088016 AGTGCTTGCTTGAATTGTTATCAA 57.912 33.333 0.00 0.00 37.98 2.57
169 170 5.710513 AGTGCTTGCTTGAATTGTTATCA 57.289 34.783 0.00 0.00 0.00 2.15
173 174 9.347240 AGATATATAGTGCTTGCTTGAATTGTT 57.653 29.630 0.00 0.00 0.00 2.83
174 175 8.915057 AGATATATAGTGCTTGCTTGAATTGT 57.085 30.769 0.00 0.00 0.00 2.71
178 179 8.623903 CCAAAAGATATATAGTGCTTGCTTGAA 58.376 33.333 0.00 0.00 0.00 2.69
179 180 7.255242 GCCAAAAGATATATAGTGCTTGCTTGA 60.255 37.037 0.00 0.00 0.00 3.02
180 181 6.860023 GCCAAAAGATATATAGTGCTTGCTTG 59.140 38.462 0.00 0.00 0.00 4.01
181 182 6.015940 GGCCAAAAGATATATAGTGCTTGCTT 60.016 38.462 0.00 0.00 0.00 3.91
182 183 5.474876 GGCCAAAAGATATATAGTGCTTGCT 59.525 40.000 0.00 0.00 0.00 3.91
183 184 5.241506 TGGCCAAAAGATATATAGTGCTTGC 59.758 40.000 0.61 0.00 0.00 4.01
184 185 6.882610 TGGCCAAAAGATATATAGTGCTTG 57.117 37.500 0.61 0.00 0.00 4.01
185 186 7.175641 GTCATGGCCAAAAGATATATAGTGCTT 59.824 37.037 10.96 0.00 0.00 3.91
186 187 6.656693 GTCATGGCCAAAAGATATATAGTGCT 59.343 38.462 10.96 0.00 0.00 4.40
187 188 6.430925 TGTCATGGCCAAAAGATATATAGTGC 59.569 38.462 10.96 0.00 0.00 4.40
188 189 7.984422 TGTCATGGCCAAAAGATATATAGTG 57.016 36.000 10.96 0.00 0.00 2.74
192 193 9.758021 TGATTATGTCATGGCCAAAAGATATAT 57.242 29.630 10.96 7.50 0.00 0.86
193 194 9.585369 TTGATTATGTCATGGCCAAAAGATATA 57.415 29.630 10.96 13.39 36.54 0.86
194 195 8.362639 GTTGATTATGTCATGGCCAAAAGATAT 58.637 33.333 10.96 14.41 36.54 1.63
195 196 7.341512 TGTTGATTATGTCATGGCCAAAAGATA 59.658 33.333 10.96 7.36 36.54 1.98
196 197 6.154877 TGTTGATTATGTCATGGCCAAAAGAT 59.845 34.615 10.96 7.61 36.54 2.40
197 198 5.479724 TGTTGATTATGTCATGGCCAAAAGA 59.520 36.000 10.96 5.53 36.54 2.52
198 199 5.722263 TGTTGATTATGTCATGGCCAAAAG 58.278 37.500 10.96 2.59 36.54 2.27
199 200 5.735285 TGTTGATTATGTCATGGCCAAAA 57.265 34.783 10.96 0.00 36.54 2.44
200 201 5.657745 AGATGTTGATTATGTCATGGCCAAA 59.342 36.000 10.96 0.00 36.54 3.28
201 202 5.202765 AGATGTTGATTATGTCATGGCCAA 58.797 37.500 10.96 0.00 36.54 4.52
202 203 4.795469 AGATGTTGATTATGTCATGGCCA 58.205 39.130 8.56 8.56 36.54 5.36
203 204 4.823442 TGAGATGTTGATTATGTCATGGCC 59.177 41.667 0.00 0.00 36.54 5.36
204 205 5.530171 ACTGAGATGTTGATTATGTCATGGC 59.470 40.000 0.00 0.00 36.54 4.40
205 206 6.512903 GCACTGAGATGTTGATTATGTCATGG 60.513 42.308 0.00 0.00 36.54 3.66
206 207 6.427974 GCACTGAGATGTTGATTATGTCATG 58.572 40.000 0.00 0.00 36.54 3.07
207 208 5.530171 GGCACTGAGATGTTGATTATGTCAT 59.470 40.000 0.00 0.00 36.54 3.06
208 209 4.877823 GGCACTGAGATGTTGATTATGTCA 59.122 41.667 0.00 0.00 34.25 3.58
209 210 4.877823 TGGCACTGAGATGTTGATTATGTC 59.122 41.667 0.00 0.00 0.00 3.06
210 211 4.847198 TGGCACTGAGATGTTGATTATGT 58.153 39.130 0.00 0.00 0.00 2.29
211 212 5.823209 TTGGCACTGAGATGTTGATTATG 57.177 39.130 0.00 0.00 0.00 1.90
212 213 5.711506 TGTTTGGCACTGAGATGTTGATTAT 59.288 36.000 0.00 0.00 0.00 1.28
213 214 5.069318 TGTTTGGCACTGAGATGTTGATTA 58.931 37.500 0.00 0.00 0.00 1.75
214 215 3.890756 TGTTTGGCACTGAGATGTTGATT 59.109 39.130 0.00 0.00 0.00 2.57
215 216 3.489355 TGTTTGGCACTGAGATGTTGAT 58.511 40.909 0.00 0.00 0.00 2.57
216 217 2.929641 TGTTTGGCACTGAGATGTTGA 58.070 42.857 0.00 0.00 0.00 3.18
217 218 3.928727 ATGTTTGGCACTGAGATGTTG 57.071 42.857 0.00 0.00 0.00 3.33
218 219 8.978874 TTATATATGTTTGGCACTGAGATGTT 57.021 30.769 0.00 0.00 0.00 2.71
219 220 9.578576 AATTATATATGTTTGGCACTGAGATGT 57.421 29.630 0.00 0.00 0.00 3.06
222 223 9.725019 CCTAATTATATATGTTTGGCACTGAGA 57.275 33.333 0.00 0.00 0.00 3.27
223 224 9.725019 TCCTAATTATATATGTTTGGCACTGAG 57.275 33.333 0.00 0.00 0.00 3.35
241 242 9.378551 GTCATGTCCGCATATATTTCCTAATTA 57.621 33.333 0.00 0.00 33.30 1.40
242 243 7.882791 TGTCATGTCCGCATATATTTCCTAATT 59.117 33.333 0.00 0.00 33.30 1.40
243 244 7.334421 GTGTCATGTCCGCATATATTTCCTAAT 59.666 37.037 0.00 0.00 33.30 1.73
244 245 6.649141 GTGTCATGTCCGCATATATTTCCTAA 59.351 38.462 0.00 0.00 33.30 2.69
245 246 6.014584 AGTGTCATGTCCGCATATATTTCCTA 60.015 38.462 0.00 0.00 33.30 2.94
246 247 4.997395 GTGTCATGTCCGCATATATTTCCT 59.003 41.667 0.00 0.00 33.30 3.36
247 248 4.997395 AGTGTCATGTCCGCATATATTTCC 59.003 41.667 0.00 0.00 33.30 3.13
248 249 5.615544 GCAGTGTCATGTCCGCATATATTTC 60.616 44.000 0.00 0.00 33.30 2.17
249 250 4.214119 GCAGTGTCATGTCCGCATATATTT 59.786 41.667 0.00 0.00 33.30 1.40
250 251 3.748048 GCAGTGTCATGTCCGCATATATT 59.252 43.478 0.00 0.00 33.30 1.28
251 252 3.244181 TGCAGTGTCATGTCCGCATATAT 60.244 43.478 0.00 0.00 33.30 0.86
252 253 2.102252 TGCAGTGTCATGTCCGCATATA 59.898 45.455 0.00 0.00 33.30 0.86
253 254 1.134431 TGCAGTGTCATGTCCGCATAT 60.134 47.619 0.00 0.00 33.30 1.78
254 255 0.248843 TGCAGTGTCATGTCCGCATA 59.751 50.000 0.00 0.00 33.30 3.14
255 256 0.606130 TTGCAGTGTCATGTCCGCAT 60.606 50.000 0.00 0.00 35.32 4.73
256 257 0.817229 TTTGCAGTGTCATGTCCGCA 60.817 50.000 0.00 0.00 0.00 5.69
257 258 0.310543 TTTTGCAGTGTCATGTCCGC 59.689 50.000 0.00 0.00 0.00 5.54
258 259 2.290367 TCTTTTTGCAGTGTCATGTCCG 59.710 45.455 0.00 0.00 0.00 4.79
259 260 3.988379 TCTTTTTGCAGTGTCATGTCC 57.012 42.857 0.00 0.00 0.00 4.02
260 261 3.725740 CGTTCTTTTTGCAGTGTCATGTC 59.274 43.478 0.00 0.00 0.00 3.06
261 262 3.489059 CCGTTCTTTTTGCAGTGTCATGT 60.489 43.478 0.00 0.00 0.00 3.21
262 263 3.044986 CCGTTCTTTTTGCAGTGTCATG 58.955 45.455 0.00 0.00 0.00 3.07
263 264 2.543653 GCCGTTCTTTTTGCAGTGTCAT 60.544 45.455 0.00 0.00 0.00 3.06
264 265 1.202245 GCCGTTCTTTTTGCAGTGTCA 60.202 47.619 0.00 0.00 0.00 3.58
265 266 1.477105 GCCGTTCTTTTTGCAGTGTC 58.523 50.000 0.00 0.00 0.00 3.67
266 267 0.248458 CGCCGTTCTTTTTGCAGTGT 60.248 50.000 0.00 0.00 0.00 3.55
267 268 1.539776 GCGCCGTTCTTTTTGCAGTG 61.540 55.000 0.00 0.00 0.00 3.66
268 269 1.299089 GCGCCGTTCTTTTTGCAGT 60.299 52.632 0.00 0.00 0.00 4.40
269 270 2.356796 CGCGCCGTTCTTTTTGCAG 61.357 57.895 0.00 0.00 0.00 4.41
270 271 2.352915 CGCGCCGTTCTTTTTGCA 60.353 55.556 0.00 0.00 0.00 4.08
271 272 2.992407 TTCCGCGCCGTTCTTTTTGC 62.992 55.000 0.00 0.00 0.00 3.68
272 273 0.592754 TTTCCGCGCCGTTCTTTTTG 60.593 50.000 0.00 0.00 0.00 2.44
273 274 0.317519 CTTTCCGCGCCGTTCTTTTT 60.318 50.000 0.00 0.00 0.00 1.94
274 275 1.161563 TCTTTCCGCGCCGTTCTTTT 61.162 50.000 0.00 0.00 0.00 2.27
275 276 1.161563 TTCTTTCCGCGCCGTTCTTT 61.162 50.000 0.00 0.00 0.00 2.52
276 277 1.595929 TTCTTTCCGCGCCGTTCTT 60.596 52.632 0.00 0.00 0.00 2.52
277 278 2.029964 TTCTTTCCGCGCCGTTCT 59.970 55.556 0.00 0.00 0.00 3.01
278 279 2.172659 GTTCTTTCCGCGCCGTTC 59.827 61.111 0.00 0.00 0.00 3.95
279 280 3.708734 CGTTCTTTCCGCGCCGTT 61.709 61.111 0.00 0.00 0.00 4.44
285 286 3.646735 GAAGCGCCGTTCTTTCCGC 62.647 63.158 2.29 0.00 46.14 5.54
286 287 1.956620 GAGAAGCGCCGTTCTTTCCG 61.957 60.000 12.58 0.00 36.89 4.30
287 288 0.670854 AGAGAAGCGCCGTTCTTTCC 60.671 55.000 12.58 1.77 36.89 3.13
288 289 1.921230 CTAGAGAAGCGCCGTTCTTTC 59.079 52.381 12.58 5.14 36.89 2.62
289 290 1.997669 CTAGAGAAGCGCCGTTCTTT 58.002 50.000 12.58 9.88 36.89 2.52
290 291 0.458716 GCTAGAGAAGCGCCGTTCTT 60.459 55.000 12.58 6.40 42.53 2.52
291 292 1.139947 GCTAGAGAAGCGCCGTTCT 59.860 57.895 11.33 11.33 42.53 3.01
292 293 3.694527 GCTAGAGAAGCGCCGTTC 58.305 61.111 2.29 1.70 42.53 3.95
300 301 3.406728 TGACGAATGACGCTAGAGAAG 57.593 47.619 0.00 0.00 46.94 2.85
301 302 3.842732 TTGACGAATGACGCTAGAGAA 57.157 42.857 0.00 0.00 46.94 2.87
302 303 3.190744 AGTTTGACGAATGACGCTAGAGA 59.809 43.478 0.00 0.00 46.94 3.10
303 304 3.502920 AGTTTGACGAATGACGCTAGAG 58.497 45.455 0.00 0.00 46.94 2.43
304 305 3.190744 AGAGTTTGACGAATGACGCTAGA 59.809 43.478 0.00 0.00 46.94 2.43
305 306 3.502920 AGAGTTTGACGAATGACGCTAG 58.497 45.455 0.00 0.00 46.94 3.42
306 307 3.570926 AGAGTTTGACGAATGACGCTA 57.429 42.857 0.00 0.00 46.94 4.26
307 308 2.440539 AGAGTTTGACGAATGACGCT 57.559 45.000 0.00 0.00 46.94 5.07
308 309 2.028165 GCTAGAGTTTGACGAATGACGC 59.972 50.000 0.00 0.00 46.94 5.19
310 311 3.368236 GTGGCTAGAGTTTGACGAATGAC 59.632 47.826 0.00 0.00 0.00 3.06
311 312 3.585862 GTGGCTAGAGTTTGACGAATGA 58.414 45.455 0.00 0.00 0.00 2.57
312 313 2.345641 CGTGGCTAGAGTTTGACGAATG 59.654 50.000 0.00 0.00 0.00 2.67
313 314 2.607187 CGTGGCTAGAGTTTGACGAAT 58.393 47.619 0.00 0.00 0.00 3.34
314 315 1.336517 CCGTGGCTAGAGTTTGACGAA 60.337 52.381 0.00 0.00 0.00 3.85
315 316 0.242825 CCGTGGCTAGAGTTTGACGA 59.757 55.000 0.00 0.00 0.00 4.20
316 317 0.038526 ACCGTGGCTAGAGTTTGACG 60.039 55.000 0.00 0.00 0.00 4.35
317 318 2.165319 AACCGTGGCTAGAGTTTGAC 57.835 50.000 0.00 0.00 0.00 3.18
318 319 2.549349 GGAAACCGTGGCTAGAGTTTGA 60.549 50.000 0.00 0.00 32.80 2.69
319 320 1.804748 GGAAACCGTGGCTAGAGTTTG 59.195 52.381 0.00 0.00 32.80 2.93
320 321 1.271217 GGGAAACCGTGGCTAGAGTTT 60.271 52.381 0.00 0.00 43.64 2.66
321 322 0.323957 GGGAAACCGTGGCTAGAGTT 59.676 55.000 0.00 0.00 43.64 3.01
322 323 1.980844 GGGAAACCGTGGCTAGAGT 59.019 57.895 0.00 0.00 43.64 3.24
323 324 4.934989 GGGAAACCGTGGCTAGAG 57.065 61.111 0.00 0.00 43.64 2.43
355 356 3.400255 GAGAACCGTGGCTAGAGTTTTT 58.600 45.455 0.00 0.00 0.00 1.94
356 357 2.289506 GGAGAACCGTGGCTAGAGTTTT 60.290 50.000 0.00 0.00 0.00 2.43
362 363 1.656652 CATTGGAGAACCGTGGCTAG 58.343 55.000 0.00 0.00 39.42 3.42
363 364 0.392461 GCATTGGAGAACCGTGGCTA 60.392 55.000 0.00 0.00 39.42 3.93
385 386 5.669164 AAGTAAAGTCTGAGGTCCATCTC 57.331 43.478 0.00 0.00 0.00 2.75
398 399 3.006537 GGGGCAAAGGGAAAAGTAAAGTC 59.993 47.826 0.00 0.00 0.00 3.01
404 405 3.560357 ATAAGGGGCAAAGGGAAAAGT 57.440 42.857 0.00 0.00 0.00 2.66
482 485 6.104665 AGTATAGTTTGGACCTTTTCTACGC 58.895 40.000 0.00 0.00 0.00 4.42
571 2523 4.097892 ACTGCATTATTTTGGTCGGATTCC 59.902 41.667 0.00 0.00 0.00 3.01
738 2697 0.624795 AGGGAGGGGAGGGATCAAAC 60.625 60.000 0.00 0.00 0.00 2.93
760 2719 2.449322 CTGGGATGGGAGGAGGGG 60.449 72.222 0.00 0.00 0.00 4.79
866 2825 0.737715 CTGGAGGCCGAGAAACGAAG 60.738 60.000 0.00 0.00 45.77 3.79
941 2901 1.004595 GGACCGAAAACCAGATACGC 58.995 55.000 0.00 0.00 0.00 4.42
1136 3106 2.010145 TTCAGGAATCGAGCTTTCCG 57.990 50.000 9.51 5.83 45.99 4.30
1264 3234 9.412460 AGCATAGACAAATGATCAGGAAAAATA 57.588 29.630 0.09 0.00 0.00 1.40
1265 3235 8.302515 AGCATAGACAAATGATCAGGAAAAAT 57.697 30.769 0.09 0.00 0.00 1.82
1284 3255 6.237942 CGTCCTGTTCATAAAAGTGAGCATAG 60.238 42.308 0.00 0.00 38.40 2.23
1309 3280 4.899239 ATGCTACGAGCCTGGCGC 62.899 66.667 13.96 13.36 41.51 6.53
1376 3347 1.230324 ACAGAGAAAAAGGAGCGCAC 58.770 50.000 11.47 1.97 0.00 5.34
1411 3382 4.777896 TCTTCCTTGACATGCTACCTAACT 59.222 41.667 0.00 0.00 0.00 2.24
1460 3431 6.029346 CAAAATTTGGACTCTGTTAGGCAT 57.971 37.500 0.00 0.00 33.25 4.40
1681 3653 7.200434 ACATAATAGAGGTGGTGACTTCAAT 57.800 36.000 0.00 0.00 30.51 2.57
1688 3660 5.185454 CAAGCAACATAATAGAGGTGGTGA 58.815 41.667 0.00 0.00 32.38 4.02
1691 3663 3.947196 TGCAAGCAACATAATAGAGGTGG 59.053 43.478 0.00 0.00 0.00 4.61
1707 3679 6.146673 AGCTCAAATCTTGTTAATTTGCAAGC 59.853 34.615 13.57 11.37 41.66 4.01
1711 3683 8.970691 TCTAAGCTCAAATCTTGTTAATTTGC 57.029 30.769 4.17 0.00 41.66 3.68
1748 3720 1.680735 TCGCCACAAAGATGCAAAACT 59.319 42.857 0.00 0.00 0.00 2.66
1762 3734 1.453155 AACCAACATGATCTCGCCAC 58.547 50.000 0.00 0.00 0.00 5.01
1769 3741 6.375455 ACATCTCTACCAAAACCAACATGATC 59.625 38.462 0.00 0.00 0.00 2.92
1795 3767 1.197492 CTAGCGCAACACATTCTTGCA 59.803 47.619 11.47 0.00 43.61 4.08
1796 3768 1.464608 TCTAGCGCAACACATTCTTGC 59.535 47.619 11.47 0.00 40.61 4.01
1810 3782 2.476854 GCTTGCTGTTCCAATTCTAGCG 60.477 50.000 0.00 0.00 37.20 4.26
1816 3788 5.657474 CATATCTTGCTTGCTGTTCCAATT 58.343 37.500 0.00 0.00 0.00 2.32
1920 3892 3.387050 AGGAAGGTCATTCGGTACCATAC 59.613 47.826 13.54 1.79 38.95 2.39
1930 3902 6.284459 CCAGATAAGTACAGGAAGGTCATTC 58.716 44.000 0.00 0.00 37.17 2.67
1941 3913 3.739519 GCCAGTGAGCCAGATAAGTACAG 60.740 52.174 0.00 0.00 0.00 2.74
1969 3941 4.710324 TGGGAAACAGTAGGTGTAAGTTG 58.290 43.478 0.00 0.00 39.03 3.16
2027 3999 6.460123 GGTGCTCCTTGGTATGATAAACATTG 60.460 42.308 0.00 0.00 40.07 2.82
2029 4001 5.133221 GGTGCTCCTTGGTATGATAAACAT 58.867 41.667 0.00 0.00 42.39 2.71
2042 4014 5.297029 GCTTTATACTTTAGGGTGCTCCTTG 59.703 44.000 4.53 0.00 45.47 3.61
2133 4106 5.306678 TGTCCAGAATTTTAATGCCAAAGGT 59.693 36.000 0.00 0.00 0.00 3.50
2178 4151 6.321181 TGGCAAGAACAAAAATGAGAAGTACT 59.679 34.615 0.00 0.00 0.00 2.73
2216 4189 3.907474 TGACCATCCACTAAGAACCAAGA 59.093 43.478 0.00 0.00 0.00 3.02
2224 4197 8.511604 AAATAGTTGAATGACCATCCACTAAG 57.488 34.615 0.00 0.00 0.00 2.18
2242 4215 6.041979 ACAATCCTGCCACAAAAGAAATAGTT 59.958 34.615 0.00 0.00 0.00 2.24
2250 4223 1.787012 GCACAATCCTGCCACAAAAG 58.213 50.000 0.00 0.00 0.00 2.27
2320 4293 8.738645 ACAACCAATATCTTCTCCTCATTTAC 57.261 34.615 0.00 0.00 0.00 2.01
2458 4435 4.026356 AGGTGAACAAATCCTTCCTCTG 57.974 45.455 0.00 0.00 0.00 3.35
2520 4497 4.215109 AGTTTGTGTAGGCAACCAAAGAT 58.785 39.130 0.00 0.00 32.46 2.40
2723 4702 2.518349 CCACACCCCCACACACAC 60.518 66.667 0.00 0.00 0.00 3.82
2725 4704 3.816090 ACCCACACCCCCACACAC 61.816 66.667 0.00 0.00 0.00 3.82
2727 4706 3.816090 ACACCCACACCCCCACAC 61.816 66.667 0.00 0.00 0.00 3.82
2728 4707 3.814906 CACACCCACACCCCCACA 61.815 66.667 0.00 0.00 0.00 4.17
2729 4708 3.816090 ACACACCCACACCCCCAC 61.816 66.667 0.00 0.00 0.00 4.61
2730 4709 3.814906 CACACACCCACACCCCCA 61.815 66.667 0.00 0.00 0.00 4.96
2731 4710 3.816090 ACACACACCCACACCCCC 61.816 66.667 0.00 0.00 0.00 5.40
2732 4711 2.518349 CACACACACCCACACCCC 60.518 66.667 0.00 0.00 0.00 4.95
2733 4712 2.118404 CACACACACACCCACACCC 61.118 63.158 0.00 0.00 0.00 4.61
2734 4713 1.377987 ACACACACACACCCACACC 60.378 57.895 0.00 0.00 0.00 4.16
2735 4714 0.958382 ACACACACACACACCCACAC 60.958 55.000 0.00 0.00 0.00 3.82
2736 4715 0.957888 CACACACACACACACCCACA 60.958 55.000 0.00 0.00 0.00 4.17
2737 4716 0.958382 ACACACACACACACACCCAC 60.958 55.000 0.00 0.00 0.00 4.61
2738 4717 0.957888 CACACACACACACACACCCA 60.958 55.000 0.00 0.00 0.00 4.51
2739 4718 0.958382 ACACACACACACACACACCC 60.958 55.000 0.00 0.00 0.00 4.61
2740 4719 0.167908 CACACACACACACACACACC 59.832 55.000 0.00 0.00 0.00 4.16
2741 4720 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2742 4721 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2743 4722 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2744 4723 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2745 4724 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2746 4725 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2747 4726 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2748 4727 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2749 4728 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2750 4729 2.342179 CTACACACACACACACACACA 58.658 47.619 0.00 0.00 0.00 3.72
2751 4730 1.062002 GCTACACACACACACACACAC 59.938 52.381 0.00 0.00 0.00 3.82
2832 4811 7.885399 AGCTCAGACAGGTCAATTAGTAAAAAT 59.115 33.333 1.84 0.00 0.00 1.82
2964 4944 1.561643 TCACAACTGGTTTTTGGGCA 58.438 45.000 0.00 0.00 0.00 5.36
3018 4998 8.131731 GGGTACTCTTTCATCAATTTTGCTATC 58.868 37.037 0.00 0.00 0.00 2.08
3047 5027 4.522789 GGCTAACAGAGAACCCAAATTTCA 59.477 41.667 0.00 0.00 0.00 2.69
3150 5130 4.079787 TCAAGGAATTCCCCCTCACTTATG 60.080 45.833 21.22 5.27 36.42 1.90
3237 5217 3.629142 AGTGATTTTACCTTCCCCTCG 57.371 47.619 0.00 0.00 0.00 4.63
3384 5364 3.885297 CGGAGGGCATACAAAGATGAATT 59.115 43.478 0.00 0.00 0.00 2.17
3540 5520 6.170506 TGTATAACCAATTGACCAGAGTGTC 58.829 40.000 7.12 0.00 35.77 3.67
3599 5579 1.824852 TCAGCACGAGCATTCCTTAGA 59.175 47.619 7.77 0.00 45.49 2.10
3665 5645 9.006839 TCATAGCATGATTCAAGGTTATCATTC 57.993 33.333 0.00 0.00 38.97 2.67
3681 5661 7.568349 ACTACCTTCAAATTCTCATAGCATGA 58.432 34.615 0.00 0.00 37.76 3.07
3824 5804 4.945543 TGAATCTTTGTGGTCATCATCCAG 59.054 41.667 0.00 0.00 35.49 3.86
3888 5868 9.964303 ATTTGACGCAATGAAGCATTAATAATA 57.036 25.926 0.00 0.00 32.35 0.98
3889 5869 8.876275 ATTTGACGCAATGAAGCATTAATAAT 57.124 26.923 0.00 0.00 32.35 1.28
3890 5870 8.700722 AATTTGACGCAATGAAGCATTAATAA 57.299 26.923 0.00 0.00 32.35 1.40
3892 5872 7.599630 AAATTTGACGCAATGAAGCATTAAT 57.400 28.000 0.00 0.00 32.35 1.40
3893 5873 7.418840 AAAATTTGACGCAATGAAGCATTAA 57.581 28.000 0.00 0.00 32.35 1.40
3961 5945 5.628797 TGGACAGGATAGAATAACATGCA 57.371 39.130 0.00 0.00 27.52 3.96
4128 6115 4.373116 TCGACCGCCAGCCTGTTC 62.373 66.667 0.00 0.00 0.00 3.18
4137 6124 0.311477 GAGAGGATAAGTCGACCGCC 59.689 60.000 13.01 8.65 0.00 6.13
4167 6154 0.318441 CTCTTGTTCGTCCAGGAGCA 59.682 55.000 0.00 0.00 32.70 4.26
4221 6208 4.141482 GGTTATCTAATGCCCTTCAGACCA 60.141 45.833 0.00 0.00 0.00 4.02
4280 6267 8.472413 CACTAATTGATCCAAAATCCATCAGTT 58.528 33.333 0.00 0.00 32.87 3.16
4344 6331 8.977412 TGGAAATAAATCCCTCTTATGTTTTCC 58.023 33.333 0.00 0.00 38.82 3.13
4400 6389 6.094881 CCTCTTTCTGGTACAAAGAACAAACA 59.905 38.462 9.16 0.00 38.98 2.83
4421 6410 1.554160 CTCTGGCATGACTTCACCTCT 59.446 52.381 0.00 0.00 0.00 3.69
4515 6504 4.180057 GCAGACAAACAAAACATGGTTCA 58.820 39.130 0.00 0.00 36.60 3.18
4670 6660 3.135712 ACATGTGTAGAACAGGGTCACAA 59.864 43.478 0.00 0.00 44.94 3.33
4794 6790 8.157476 GGGTCACAGTATTTTCATACCATAGAT 58.843 37.037 0.00 0.00 36.63 1.98
4795 6791 7.347222 AGGGTCACAGTATTTTCATACCATAGA 59.653 37.037 0.00 0.00 36.63 1.98
4796 6792 7.442364 CAGGGTCACAGTATTTTCATACCATAG 59.558 40.741 0.00 0.00 36.63 2.23
4797 6793 7.092623 ACAGGGTCACAGTATTTTCATACCATA 60.093 37.037 0.00 0.00 36.63 2.74
4798 6794 6.122277 CAGGGTCACAGTATTTTCATACCAT 58.878 40.000 0.00 0.00 36.63 3.55
4799 6795 5.013704 ACAGGGTCACAGTATTTTCATACCA 59.986 40.000 0.00 0.00 36.63 3.25
4800 6796 5.497474 ACAGGGTCACAGTATTTTCATACC 58.503 41.667 0.00 0.00 36.63 2.73
4801 6797 6.879458 AGAACAGGGTCACAGTATTTTCATAC 59.121 38.462 0.00 0.00 36.25 2.39
4802 6798 7.016153 AGAACAGGGTCACAGTATTTTCATA 57.984 36.000 0.00 0.00 0.00 2.15
4803 6799 5.880901 AGAACAGGGTCACAGTATTTTCAT 58.119 37.500 0.00 0.00 0.00 2.57
4804 6800 5.304686 AGAACAGGGTCACAGTATTTTCA 57.695 39.130 0.00 0.00 0.00 2.69
4805 6801 6.147328 GTGTAGAACAGGGTCACAGTATTTTC 59.853 42.308 0.00 0.00 0.00 2.29
4806 6802 5.995897 GTGTAGAACAGGGTCACAGTATTTT 59.004 40.000 0.00 0.00 0.00 1.82
4807 6803 5.071250 TGTGTAGAACAGGGTCACAGTATTT 59.929 40.000 0.00 0.00 34.74 1.40
4808 6804 4.591498 TGTGTAGAACAGGGTCACAGTATT 59.409 41.667 0.00 0.00 34.74 1.89
4809 6805 4.157246 TGTGTAGAACAGGGTCACAGTAT 58.843 43.478 0.00 0.00 34.74 2.12
4810 6806 3.568443 TGTGTAGAACAGGGTCACAGTA 58.432 45.455 0.00 0.00 34.74 2.74
4811 6807 2.394632 TGTGTAGAACAGGGTCACAGT 58.605 47.619 0.00 0.00 34.74 3.55
4812 6808 3.259374 AGATGTGTAGAACAGGGTCACAG 59.741 47.826 0.00 0.00 43.64 3.66
4813 6809 3.239449 AGATGTGTAGAACAGGGTCACA 58.761 45.455 0.00 0.00 43.64 3.58
4814 6810 3.963428 AGATGTGTAGAACAGGGTCAC 57.037 47.619 0.00 0.00 43.64 3.67
4815 6811 4.673968 AGTAGATGTGTAGAACAGGGTCA 58.326 43.478 0.00 0.00 43.64 4.02
4816 6812 4.098196 GGAGTAGATGTGTAGAACAGGGTC 59.902 50.000 0.00 0.00 43.64 4.46
4817 6813 4.024670 GGAGTAGATGTGTAGAACAGGGT 58.975 47.826 0.00 0.00 43.64 4.34
4818 6814 3.385111 GGGAGTAGATGTGTAGAACAGGG 59.615 52.174 0.00 0.00 43.64 4.45
4819 6815 4.282496 AGGGAGTAGATGTGTAGAACAGG 58.718 47.826 0.00 0.00 43.64 4.00
4820 6816 4.339814 GGAGGGAGTAGATGTGTAGAACAG 59.660 50.000 0.00 0.00 43.64 3.16
4821 6817 4.279145 GGAGGGAGTAGATGTGTAGAACA 58.721 47.826 0.00 0.00 44.79 3.18
4822 6818 3.315749 CGGAGGGAGTAGATGTGTAGAAC 59.684 52.174 0.00 0.00 0.00 3.01
4823 6819 3.053842 ACGGAGGGAGTAGATGTGTAGAA 60.054 47.826 0.00 0.00 0.00 2.10
4824 6820 2.508716 ACGGAGGGAGTAGATGTGTAGA 59.491 50.000 0.00 0.00 0.00 2.59
4825 6821 2.933573 ACGGAGGGAGTAGATGTGTAG 58.066 52.381 0.00 0.00 0.00 2.74
4826 6822 3.377253 AACGGAGGGAGTAGATGTGTA 57.623 47.619 0.00 0.00 0.00 2.90
4827 6823 2.233305 AACGGAGGGAGTAGATGTGT 57.767 50.000 0.00 0.00 0.00 3.72
4828 6824 3.611766 AAAACGGAGGGAGTAGATGTG 57.388 47.619 0.00 0.00 0.00 3.21
4829 6825 5.952347 ATAAAAACGGAGGGAGTAGATGT 57.048 39.130 0.00 0.00 0.00 3.06
4830 6826 8.904099 ATAAATAAAAACGGAGGGAGTAGATG 57.096 34.615 0.00 0.00 0.00 2.90
4831 6827 9.916360 AAATAAATAAAAACGGAGGGAGTAGAT 57.084 29.630 0.00 0.00 0.00 1.98
4832 6828 9.387257 GAAATAAATAAAAACGGAGGGAGTAGA 57.613 33.333 0.00 0.00 0.00 2.59
4833 6829 9.169592 TGAAATAAATAAAAACGGAGGGAGTAG 57.830 33.333 0.00 0.00 0.00 2.57
4834 6830 8.949177 GTGAAATAAATAAAAACGGAGGGAGTA 58.051 33.333 0.00 0.00 0.00 2.59
4835 6831 7.449086 TGTGAAATAAATAAAAACGGAGGGAGT 59.551 33.333 0.00 0.00 0.00 3.85
4836 6832 7.822658 TGTGAAATAAATAAAAACGGAGGGAG 58.177 34.615 0.00 0.00 0.00 4.30
4837 6833 7.762588 TGTGAAATAAATAAAAACGGAGGGA 57.237 32.000 0.00 0.00 0.00 4.20
4854 6850 9.520515 AGTTAGGTCAAAGTTCATATGTGAAAT 57.479 29.630 6.45 2.59 45.38 2.17
4855 6851 8.918202 AGTTAGGTCAAAGTTCATATGTGAAA 57.082 30.769 6.45 0.00 45.38 2.69
4856 6852 8.918202 AAGTTAGGTCAAAGTTCATATGTGAA 57.082 30.769 0.03 0.03 41.89 3.18
4857 6853 8.783093 CAAAGTTAGGTCAAAGTTCATATGTGA 58.217 33.333 1.90 0.00 0.00 3.58
4858 6854 8.567948 ACAAAGTTAGGTCAAAGTTCATATGTG 58.432 33.333 1.90 0.00 0.00 3.21
4859 6855 8.691661 ACAAAGTTAGGTCAAAGTTCATATGT 57.308 30.769 1.90 0.00 0.00 2.29
4863 6859 9.185680 AGTTTACAAAGTTAGGTCAAAGTTCAT 57.814 29.630 0.00 0.00 0.00 2.57
4864 6860 8.570068 AGTTTACAAAGTTAGGTCAAAGTTCA 57.430 30.769 0.00 0.00 0.00 3.18
4867 6863 9.895138 TCTAAGTTTACAAAGTTAGGTCAAAGT 57.105 29.630 21.03 0.00 45.47 2.66
4966 6962 3.130164 CCACAATGCCAAATCGATACCAA 59.870 43.478 0.00 0.00 0.00 3.67
4969 6965 4.036734 ACATCCACAATGCCAAATCGATAC 59.963 41.667 0.00 0.00 39.12 2.24
4970 6966 4.206375 ACATCCACAATGCCAAATCGATA 58.794 39.130 0.00 0.00 39.12 2.92
4973 6969 2.945447 ACATCCACAATGCCAAATCG 57.055 45.000 0.00 0.00 39.12 3.34
4981 6977 5.404066 GGGAAAAACGTTAACATCCACAATG 59.596 40.000 17.80 0.00 41.48 2.82
4996 6992 5.725362 TGGCCAAATTTATAGGGAAAAACG 58.275 37.500 0.61 0.00 0.00 3.60
4997 6993 7.663905 ACTTTGGCCAAATTTATAGGGAAAAAC 59.336 33.333 30.46 0.00 0.00 2.43
5003 6999 8.073467 TCTAAACTTTGGCCAAATTTATAGGG 57.927 34.615 30.46 18.20 0.00 3.53
5004 7000 9.586435 CTTCTAAACTTTGGCCAAATTTATAGG 57.414 33.333 30.46 21.12 0.00 2.57
5012 7099 6.103330 GTCAAACTTCTAAACTTTGGCCAAA 58.897 36.000 28.65 28.65 0.00 3.28
5015 7102 4.500887 GGGTCAAACTTCTAAACTTTGGCC 60.501 45.833 0.00 0.00 45.25 5.36
5017 7104 5.845391 TGGGTCAAACTTCTAAACTTTGG 57.155 39.130 0.00 0.00 0.00 3.28
5039 7126 6.743575 AACTTCGCATATTAGCTTTGTCTT 57.256 33.333 0.00 0.00 0.00 3.01
5046 7133 6.978343 TTGTGTTAACTTCGCATATTAGCT 57.022 33.333 7.22 0.00 0.00 3.32
5051 7138 4.691685 TCCGTTTGTGTTAACTTCGCATAT 59.308 37.500 7.22 0.00 0.00 1.78
5052 7139 4.056740 TCCGTTTGTGTTAACTTCGCATA 58.943 39.130 7.22 0.00 0.00 3.14
5062 7149 6.549433 AATATACTCCCTCCGTTTGTGTTA 57.451 37.500 0.00 0.00 0.00 2.41
5065 7152 6.158023 ACTAATATACTCCCTCCGTTTGTG 57.842 41.667 0.00 0.00 0.00 3.33
5069 7156 8.747471 GCTATTTACTAATATACTCCCTCCGTT 58.253 37.037 0.00 0.00 0.00 4.44
5072 7159 7.147949 TGCGCTATTTACTAATATACTCCCTCC 60.148 40.741 9.73 0.00 0.00 4.30
5073 7160 7.769220 TGCGCTATTTACTAATATACTCCCTC 58.231 38.462 9.73 0.00 0.00 4.30
5075 7162 7.042658 GCATGCGCTATTTACTAATATACTCCC 60.043 40.741 9.73 0.00 34.30 4.30
5094 7181 6.329838 TCATTATGTTTTAAAAGCATGCGC 57.670 33.333 13.01 0.00 38.99 6.09
5147 7735 7.906160 TCACTGCTAAACGCTCTTATATTTTC 58.094 34.615 0.00 0.00 40.11 2.29
5148 7736 7.843490 TCACTGCTAAACGCTCTTATATTTT 57.157 32.000 0.00 0.00 40.11 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.