Multiple sequence alignment - TraesCS5A01G097200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G097200 chr5A 100.000 4478 0 0 1 4478 137283661 137279184 0.000000e+00 8270
1 TraesCS5A01G097200 chr5D 95.086 4111 129 34 395 4478 123889044 123884980 0.000000e+00 6405
2 TraesCS5A01G097200 chr5D 87.500 96 6 1 245 340 123943210 123943121 6.130000e-19 106
3 TraesCS5A01G097200 chr5B 95.938 2388 79 11 1552 3931 136630567 136628190 0.000000e+00 3856
4 TraesCS5A01G097200 chr5B 91.795 1231 41 19 346 1555 136632092 136630901 0.000000e+00 1659
5 TraesCS5A01G097200 chr5B 89.851 404 10 7 4093 4478 136628191 136627801 1.450000e-134 490
6 TraesCS5A01G097200 chr2D 90.116 172 14 3 3927 4097 73403051 73402882 2.100000e-53 220
7 TraesCS5A01G097200 chr2D 89.209 139 9 5 1246 1382 27780253 27780119 7.700000e-38 169
8 TraesCS5A01G097200 chr6A 90.000 170 16 1 3927 4096 48520206 48520038 7.540000e-53 219
9 TraesCS5A01G097200 chr6A 88.333 180 18 3 3919 4097 594496529 594496706 3.510000e-51 213
10 TraesCS5A01G097200 chr6A 88.489 139 10 6 1246 1382 167178418 167178552 3.580000e-36 163
11 TraesCS5A01G097200 chr6D 89.266 177 13 4 3930 4104 308575224 308575396 2.710000e-52 217
12 TraesCS5A01G097200 chr1D 89.535 172 12 4 3927 4097 289532275 289532109 3.510000e-51 213
13 TraesCS5A01G097200 chr1D 89.535 172 12 4 3927 4097 289597491 289597325 3.510000e-51 213
14 TraesCS5A01G097200 chr7A 89.017 173 16 3 3923 4094 732053312 732053482 1.260000e-50 211
15 TraesCS5A01G097200 chr1B 88.953 172 16 3 3928 4097 390879363 390879193 4.540000e-50 209
16 TraesCS5A01G097200 chr1B 87.050 139 13 4 1255 1391 565902952 565902817 7.760000e-33 152
17 TraesCS5A01G097200 chr2B 83.092 207 18 14 1195 1391 43676805 43676606 5.960000e-39 172
18 TraesCS5A01G097200 chr2A 88.514 148 10 6 1246 1391 29885561 29885419 5.960000e-39 172
19 TraesCS5A01G097200 chr7B 83.708 178 21 6 1219 1391 27321957 27321783 1.290000e-35 161
20 TraesCS5A01G097200 chr3A 88.722 133 11 4 1252 1382 42641032 42641162 4.640000e-35 159


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G097200 chr5A 137279184 137283661 4477 True 8270.000000 8270 100.000 1 4478 1 chr5A.!!$R1 4477
1 TraesCS5A01G097200 chr5D 123884980 123889044 4064 True 6405.000000 6405 95.086 395 4478 1 chr5D.!!$R1 4083
2 TraesCS5A01G097200 chr5B 136627801 136632092 4291 True 2001.666667 3856 92.528 346 4478 3 chr5B.!!$R1 4132


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
118 119 0.031449 CGCGGTGTTTTTCCCACAAT 59.969 50.0 0.00 0.0 34.46 2.71 F
228 229 0.108585 ATCACACGCTCCACCTTGTT 59.891 50.0 0.00 0.0 0.00 2.83 F
270 271 0.398696 AGGTGCCCGTACACATTTCA 59.601 50.0 7.28 0.0 42.55 2.69 F
1707 2082 0.606604 TCAGAAGTCCCAGTAACGGC 59.393 55.0 0.00 0.0 0.00 5.68 F
2775 3157 0.325933 TGGCTGATGTTGTGGAGGAG 59.674 55.0 0.00 0.0 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1571 1944 0.745845 CAGCAATTCTCAGACCCCCG 60.746 60.000 0.00 0.0 0.00 5.73 R
2145 2524 0.179105 TGCATTGCATTGATTCGGCC 60.179 50.000 7.38 0.0 31.71 6.13 R
2235 2614 1.207089 TGATGTCTGACCTTTAGCCCG 59.793 52.381 5.17 0.0 0.00 6.13 R
3276 3660 1.048601 AGAACACCTCTTCGGCTTCA 58.951 50.000 0.00 0.0 35.61 3.02 R
3606 3992 4.413189 ACAGATATGAATGACCCACATGGA 59.587 41.667 0.00 0.0 39.39 3.41 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.162154 CCCTAGGCCTCGTTCCCC 61.162 72.222 9.68 0.00 0.00 4.81
18 19 3.162154 CCTAGGCCTCGTTCCCCC 61.162 72.222 9.68 0.00 0.00 5.40
19 20 2.041819 CTAGGCCTCGTTCCCCCT 60.042 66.667 9.68 0.00 0.00 4.79
20 21 1.689582 CTAGGCCTCGTTCCCCCTT 60.690 63.158 9.68 0.00 0.00 3.95
21 22 1.229723 TAGGCCTCGTTCCCCCTTT 60.230 57.895 9.68 0.00 0.00 3.11
22 23 0.043032 TAGGCCTCGTTCCCCCTTTA 59.957 55.000 9.68 0.00 0.00 1.85
23 24 0.623617 AGGCCTCGTTCCCCCTTTAT 60.624 55.000 0.00 0.00 0.00 1.40
24 25 1.134228 GGCCTCGTTCCCCCTTTATA 58.866 55.000 0.00 0.00 0.00 0.98
25 26 1.491754 GGCCTCGTTCCCCCTTTATAA 59.508 52.381 0.00 0.00 0.00 0.98
26 27 2.486727 GGCCTCGTTCCCCCTTTATAAG 60.487 54.545 0.00 0.00 0.00 1.73
39 40 4.003648 CCTTTATAAGGCGAGGCTAATGG 58.996 47.826 0.00 0.00 42.78 3.16
40 41 3.695830 TTATAAGGCGAGGCTAATGGG 57.304 47.619 0.00 0.00 0.00 4.00
41 42 1.435256 ATAAGGCGAGGCTAATGGGT 58.565 50.000 0.00 0.00 0.00 4.51
42 43 2.091098 TAAGGCGAGGCTAATGGGTA 57.909 50.000 0.00 0.00 0.00 3.69
43 44 0.759346 AAGGCGAGGCTAATGGGTAG 59.241 55.000 0.00 0.00 0.00 3.18
44 45 1.122019 AGGCGAGGCTAATGGGTAGG 61.122 60.000 0.00 0.00 0.00 3.18
45 46 1.408453 GGCGAGGCTAATGGGTAGGT 61.408 60.000 0.00 0.00 0.00 3.08
46 47 0.033642 GCGAGGCTAATGGGTAGGTC 59.966 60.000 0.00 0.00 0.00 3.85
47 48 1.410004 CGAGGCTAATGGGTAGGTCA 58.590 55.000 0.00 0.00 0.00 4.02
48 49 1.760613 CGAGGCTAATGGGTAGGTCAA 59.239 52.381 0.00 0.00 0.00 3.18
49 50 2.483188 CGAGGCTAATGGGTAGGTCAAC 60.483 54.545 0.00 0.00 0.00 3.18
50 51 2.772515 GAGGCTAATGGGTAGGTCAACT 59.227 50.000 0.00 0.00 0.00 3.16
51 52 3.190439 AGGCTAATGGGTAGGTCAACTT 58.810 45.455 0.00 0.00 0.00 2.66
52 53 3.200165 AGGCTAATGGGTAGGTCAACTTC 59.800 47.826 0.00 0.00 0.00 3.01
53 54 3.054655 GGCTAATGGGTAGGTCAACTTCA 60.055 47.826 0.00 0.00 0.00 3.02
54 55 4.385310 GGCTAATGGGTAGGTCAACTTCAT 60.385 45.833 0.00 0.00 0.00 2.57
55 56 5.193679 GCTAATGGGTAGGTCAACTTCATT 58.806 41.667 0.00 0.00 32.43 2.57
56 57 5.652452 GCTAATGGGTAGGTCAACTTCATTT 59.348 40.000 0.00 0.00 31.23 2.32
57 58 5.982890 AATGGGTAGGTCAACTTCATTTG 57.017 39.130 0.00 0.00 0.00 2.32
58 59 4.447138 TGGGTAGGTCAACTTCATTTGT 57.553 40.909 0.00 0.00 0.00 2.83
59 60 5.570205 TGGGTAGGTCAACTTCATTTGTA 57.430 39.130 0.00 0.00 0.00 2.41
60 61 6.134535 TGGGTAGGTCAACTTCATTTGTAT 57.865 37.500 0.00 0.00 0.00 2.29
61 62 6.177610 TGGGTAGGTCAACTTCATTTGTATC 58.822 40.000 0.00 0.00 0.00 2.24
62 63 5.293569 GGGTAGGTCAACTTCATTTGTATCG 59.706 44.000 0.00 0.00 0.00 2.92
63 64 5.293569 GGTAGGTCAACTTCATTTGTATCGG 59.706 44.000 0.00 0.00 0.00 4.18
64 65 4.261801 AGGTCAACTTCATTTGTATCGGG 58.738 43.478 0.00 0.00 0.00 5.14
65 66 4.019681 AGGTCAACTTCATTTGTATCGGGA 60.020 41.667 0.00 0.00 0.00 5.14
66 67 4.332819 GGTCAACTTCATTTGTATCGGGAG 59.667 45.833 0.00 0.00 0.00 4.30
67 68 3.938963 TCAACTTCATTTGTATCGGGAGC 59.061 43.478 0.00 0.00 0.00 4.70
68 69 3.627395 ACTTCATTTGTATCGGGAGCA 57.373 42.857 0.00 0.00 0.00 4.26
69 70 3.270877 ACTTCATTTGTATCGGGAGCAC 58.729 45.455 0.00 0.00 0.00 4.40
70 71 3.270027 CTTCATTTGTATCGGGAGCACA 58.730 45.455 0.00 0.00 0.00 4.57
71 72 3.558931 TCATTTGTATCGGGAGCACAT 57.441 42.857 0.00 0.00 0.00 3.21
72 73 4.681074 TCATTTGTATCGGGAGCACATA 57.319 40.909 0.00 0.00 0.00 2.29
73 74 5.227569 TCATTTGTATCGGGAGCACATAT 57.772 39.130 0.00 0.00 0.00 1.78
74 75 5.237815 TCATTTGTATCGGGAGCACATATC 58.762 41.667 0.00 0.00 0.00 1.63
75 76 3.678056 TTGTATCGGGAGCACATATCC 57.322 47.619 0.00 0.00 35.99 2.59
76 77 2.604139 TGTATCGGGAGCACATATCCA 58.396 47.619 0.00 0.00 38.70 3.41
77 78 2.299013 TGTATCGGGAGCACATATCCAC 59.701 50.000 0.00 0.00 38.70 4.02
78 79 0.318441 ATCGGGAGCACATATCCACG 59.682 55.000 0.00 0.00 38.70 4.94
79 80 1.956170 CGGGAGCACATATCCACGC 60.956 63.158 0.00 0.00 38.70 5.34
80 81 1.146041 GGGAGCACATATCCACGCA 59.854 57.895 0.00 0.00 38.70 5.24
81 82 0.250467 GGGAGCACATATCCACGCAT 60.250 55.000 0.00 0.00 38.70 4.73
82 83 1.001974 GGGAGCACATATCCACGCATA 59.998 52.381 0.00 0.00 38.70 3.14
83 84 2.355108 GGGAGCACATATCCACGCATAT 60.355 50.000 0.00 0.00 38.70 1.78
84 85 3.338249 GGAGCACATATCCACGCATATT 58.662 45.455 0.00 0.00 36.79 1.28
85 86 4.503910 GGAGCACATATCCACGCATATTA 58.496 43.478 0.00 0.00 36.79 0.98
86 87 5.118990 GGAGCACATATCCACGCATATTAT 58.881 41.667 0.00 0.00 36.79 1.28
87 88 6.280643 GGAGCACATATCCACGCATATTATA 58.719 40.000 0.00 0.00 36.79 0.98
88 89 6.761242 GGAGCACATATCCACGCATATTATAA 59.239 38.462 0.00 0.00 36.79 0.98
89 90 7.254455 GGAGCACATATCCACGCATATTATAAC 60.254 40.741 0.00 0.00 36.79 1.89
90 91 6.538742 AGCACATATCCACGCATATTATAACC 59.461 38.462 0.00 0.00 0.00 2.85
91 92 6.238374 GCACATATCCACGCATATTATAACCC 60.238 42.308 0.00 0.00 0.00 4.11
92 93 6.260050 CACATATCCACGCATATTATAACCCC 59.740 42.308 0.00 0.00 0.00 4.95
93 94 3.706600 TCCACGCATATTATAACCCCC 57.293 47.619 0.00 0.00 0.00 5.40
94 95 3.253220 TCCACGCATATTATAACCCCCT 58.747 45.455 0.00 0.00 0.00 4.79
95 96 3.262405 TCCACGCATATTATAACCCCCTC 59.738 47.826 0.00 0.00 0.00 4.30
96 97 3.008594 CCACGCATATTATAACCCCCTCA 59.991 47.826 0.00 0.00 0.00 3.86
97 98 4.000988 CACGCATATTATAACCCCCTCAC 58.999 47.826 0.00 0.00 0.00 3.51
98 99 3.259064 CGCATATTATAACCCCCTCACG 58.741 50.000 0.00 0.00 0.00 4.35
99 100 3.007635 GCATATTATAACCCCCTCACGC 58.992 50.000 0.00 0.00 0.00 5.34
100 101 3.259064 CATATTATAACCCCCTCACGCG 58.741 50.000 3.53 3.53 0.00 6.01
101 102 0.250166 ATTATAACCCCCTCACGCGC 60.250 55.000 5.73 0.00 0.00 6.86
102 103 2.632136 TTATAACCCCCTCACGCGCG 62.632 60.000 30.96 30.96 0.00 6.86
112 113 2.724358 CACGCGCGGTGTTTTTCC 60.724 61.111 35.22 0.00 41.89 3.13
113 114 3.956317 ACGCGCGGTGTTTTTCCC 61.956 61.111 35.22 0.00 0.00 3.97
114 115 3.955101 CGCGCGGTGTTTTTCCCA 61.955 61.111 24.84 0.00 0.00 4.37
115 116 2.354188 GCGCGGTGTTTTTCCCAC 60.354 61.111 8.83 0.00 0.00 4.61
116 117 3.111939 CGCGGTGTTTTTCCCACA 58.888 55.556 0.00 0.00 34.46 4.17
117 118 1.433879 CGCGGTGTTTTTCCCACAA 59.566 52.632 0.00 0.00 34.46 3.33
118 119 0.031449 CGCGGTGTTTTTCCCACAAT 59.969 50.000 0.00 0.00 34.46 2.71
119 120 1.778334 GCGGTGTTTTTCCCACAATC 58.222 50.000 0.00 0.00 34.46 2.67
120 121 1.067821 GCGGTGTTTTTCCCACAATCA 59.932 47.619 0.00 0.00 34.46 2.57
121 122 2.482142 GCGGTGTTTTTCCCACAATCAA 60.482 45.455 0.00 0.00 34.46 2.57
122 123 3.801983 GCGGTGTTTTTCCCACAATCAAT 60.802 43.478 0.00 0.00 34.46 2.57
123 124 4.376146 CGGTGTTTTTCCCACAATCAATT 58.624 39.130 0.00 0.00 34.46 2.32
124 125 5.533482 CGGTGTTTTTCCCACAATCAATTA 58.467 37.500 0.00 0.00 34.46 1.40
125 126 5.986135 CGGTGTTTTTCCCACAATCAATTAA 59.014 36.000 0.00 0.00 34.46 1.40
126 127 6.480320 CGGTGTTTTTCCCACAATCAATTAAA 59.520 34.615 0.00 0.00 34.46 1.52
127 128 7.307101 CGGTGTTTTTCCCACAATCAATTAAAG 60.307 37.037 0.00 0.00 34.46 1.85
128 129 7.351981 GTGTTTTTCCCACAATCAATTAAAGC 58.648 34.615 0.00 0.00 33.00 3.51
129 130 7.011857 GTGTTTTTCCCACAATCAATTAAAGCA 59.988 33.333 0.00 0.00 33.00 3.91
130 131 7.554118 TGTTTTTCCCACAATCAATTAAAGCAA 59.446 29.630 0.00 0.00 0.00 3.91
131 132 8.401709 GTTTTTCCCACAATCAATTAAAGCAAA 58.598 29.630 0.00 0.00 0.00 3.68
132 133 8.511604 TTTTCCCACAATCAATTAAAGCAAAA 57.488 26.923 0.00 0.00 0.00 2.44
133 134 7.489574 TTCCCACAATCAATTAAAGCAAAAC 57.510 32.000 0.00 0.00 0.00 2.43
134 135 6.825610 TCCCACAATCAATTAAAGCAAAACT 58.174 32.000 0.00 0.00 0.00 2.66
135 136 7.957002 TCCCACAATCAATTAAAGCAAAACTA 58.043 30.769 0.00 0.00 0.00 2.24
136 137 8.087750 TCCCACAATCAATTAAAGCAAAACTAG 58.912 33.333 0.00 0.00 0.00 2.57
137 138 8.087750 CCCACAATCAATTAAAGCAAAACTAGA 58.912 33.333 0.00 0.00 0.00 2.43
138 139 9.474920 CCACAATCAATTAAAGCAAAACTAGAA 57.525 29.630 0.00 0.00 0.00 2.10
140 141 9.180678 ACAATCAATTAAAGCAAAACTAGAACG 57.819 29.630 0.00 0.00 0.00 3.95
141 142 8.638565 CAATCAATTAAAGCAAAACTAGAACGG 58.361 33.333 0.00 0.00 0.00 4.44
142 143 7.266922 TCAATTAAAGCAAAACTAGAACGGT 57.733 32.000 0.00 0.00 0.00 4.83
143 144 7.136119 TCAATTAAAGCAAAACTAGAACGGTG 58.864 34.615 0.00 0.00 0.00 4.94
144 145 6.628919 ATTAAAGCAAAACTAGAACGGTGT 57.371 33.333 0.00 0.00 0.00 4.16
145 146 4.976224 AAAGCAAAACTAGAACGGTGTT 57.024 36.364 0.00 0.00 0.00 3.32
146 147 7.551035 TTAAAGCAAAACTAGAACGGTGTTA 57.449 32.000 0.00 0.00 0.00 2.41
147 148 5.413969 AAGCAAAACTAGAACGGTGTTAC 57.586 39.130 0.00 0.00 0.00 2.50
148 149 3.811497 AGCAAAACTAGAACGGTGTTACC 59.189 43.478 0.00 0.00 34.05 2.85
149 150 3.811497 GCAAAACTAGAACGGTGTTACCT 59.189 43.478 0.00 0.00 35.66 3.08
150 151 4.274214 GCAAAACTAGAACGGTGTTACCTT 59.726 41.667 0.00 0.00 35.66 3.50
151 152 5.466393 GCAAAACTAGAACGGTGTTACCTTA 59.534 40.000 0.00 0.00 35.66 2.69
152 153 6.018016 GCAAAACTAGAACGGTGTTACCTTAA 60.018 38.462 0.00 0.00 35.66 1.85
153 154 7.347448 CAAAACTAGAACGGTGTTACCTTAAC 58.653 38.462 0.00 0.00 35.66 2.01
154 155 5.139435 ACTAGAACGGTGTTACCTTAACC 57.861 43.478 0.00 0.00 37.88 2.85
155 156 4.835056 ACTAGAACGGTGTTACCTTAACCT 59.165 41.667 0.00 0.00 37.88 3.50
156 157 4.263018 AGAACGGTGTTACCTTAACCTC 57.737 45.455 0.00 0.00 37.88 3.85
157 158 3.642848 AGAACGGTGTTACCTTAACCTCA 59.357 43.478 0.00 0.00 37.88 3.86
158 159 3.672767 ACGGTGTTACCTTAACCTCAG 57.327 47.619 0.00 0.00 37.88 3.35
159 160 2.301009 ACGGTGTTACCTTAACCTCAGG 59.699 50.000 0.00 0.00 37.88 3.86
160 161 2.564062 CGGTGTTACCTTAACCTCAGGA 59.436 50.000 0.00 0.00 37.88 3.86
161 162 3.615834 CGGTGTTACCTTAACCTCAGGAC 60.616 52.174 0.00 0.00 37.88 3.85
162 163 3.581770 GGTGTTACCTTAACCTCAGGACT 59.418 47.826 0.00 0.00 37.88 3.85
163 164 4.322574 GGTGTTACCTTAACCTCAGGACTC 60.323 50.000 0.00 0.00 37.88 3.36
164 165 4.282703 GTGTTACCTTAACCTCAGGACTCA 59.717 45.833 0.00 0.00 37.88 3.41
165 166 4.527038 TGTTACCTTAACCTCAGGACTCAG 59.473 45.833 0.00 0.00 37.88 3.35
166 167 3.544698 ACCTTAACCTCAGGACTCAGA 57.455 47.619 0.00 0.00 35.14 3.27
167 168 3.166679 ACCTTAACCTCAGGACTCAGAC 58.833 50.000 0.00 0.00 35.14 3.51
168 169 2.498078 CCTTAACCTCAGGACTCAGACC 59.502 54.545 0.00 0.00 32.41 3.85
169 170 3.436243 CTTAACCTCAGGACTCAGACCT 58.564 50.000 0.00 0.00 38.40 3.85
170 171 4.570079 CCTTAACCTCAGGACTCAGACCTA 60.570 50.000 0.00 0.00 35.84 3.08
171 172 2.818751 ACCTCAGGACTCAGACCTAG 57.181 55.000 0.00 0.00 35.84 3.02
172 173 2.280103 ACCTCAGGACTCAGACCTAGA 58.720 52.381 0.00 0.00 35.84 2.43
173 174 2.856231 ACCTCAGGACTCAGACCTAGAT 59.144 50.000 0.00 0.00 35.84 1.98
174 175 4.048600 ACCTCAGGACTCAGACCTAGATA 58.951 47.826 0.00 0.00 35.84 1.98
175 176 4.479056 ACCTCAGGACTCAGACCTAGATAA 59.521 45.833 0.00 0.00 35.84 1.75
176 177 5.044030 ACCTCAGGACTCAGACCTAGATAAA 60.044 44.000 0.00 0.00 35.84 1.40
177 178 6.074648 CCTCAGGACTCAGACCTAGATAAAT 58.925 44.000 0.00 0.00 35.84 1.40
178 179 6.553100 CCTCAGGACTCAGACCTAGATAAATT 59.447 42.308 0.00 0.00 35.84 1.82
179 180 7.070571 CCTCAGGACTCAGACCTAGATAAATTT 59.929 40.741 0.00 0.00 35.84 1.82
180 181 8.380742 TCAGGACTCAGACCTAGATAAATTTT 57.619 34.615 0.00 0.00 35.84 1.82
181 182 8.478877 TCAGGACTCAGACCTAGATAAATTTTC 58.521 37.037 0.00 0.00 35.84 2.29
182 183 7.713073 CAGGACTCAGACCTAGATAAATTTTCC 59.287 40.741 0.00 0.00 35.84 3.13
183 184 6.702282 GGACTCAGACCTAGATAAATTTTCCG 59.298 42.308 0.00 0.00 0.00 4.30
184 185 7.184067 ACTCAGACCTAGATAAATTTTCCGT 57.816 36.000 0.00 0.00 0.00 4.69
185 186 8.302515 ACTCAGACCTAGATAAATTTTCCGTA 57.697 34.615 0.00 0.00 0.00 4.02
186 187 8.925338 ACTCAGACCTAGATAAATTTTCCGTAT 58.075 33.333 0.00 0.00 0.00 3.06
187 188 9.197694 CTCAGACCTAGATAAATTTTCCGTATG 57.802 37.037 0.00 0.29 0.00 2.39
188 189 7.656137 TCAGACCTAGATAAATTTTCCGTATGC 59.344 37.037 0.00 0.00 0.00 3.14
189 190 6.645415 AGACCTAGATAAATTTTCCGTATGCG 59.355 38.462 0.00 0.00 37.95 4.73
190 191 6.518493 ACCTAGATAAATTTTCCGTATGCGA 58.482 36.000 4.21 0.00 41.33 5.10
191 192 7.159372 ACCTAGATAAATTTTCCGTATGCGAT 58.841 34.615 4.21 0.00 41.33 4.58
192 193 7.331193 ACCTAGATAAATTTTCCGTATGCGATC 59.669 37.037 4.21 0.00 41.33 3.69
193 194 6.481954 AGATAAATTTTCCGTATGCGATCC 57.518 37.500 4.21 0.00 41.33 3.36
194 195 3.982576 AAATTTTCCGTATGCGATCCC 57.017 42.857 4.21 0.00 41.33 3.85
195 196 2.930826 ATTTTCCGTATGCGATCCCT 57.069 45.000 4.21 0.00 41.33 4.20
196 197 2.702592 TTTTCCGTATGCGATCCCTT 57.297 45.000 4.21 0.00 41.33 3.95
197 198 2.702592 TTTCCGTATGCGATCCCTTT 57.297 45.000 4.21 0.00 41.33 3.11
198 199 2.702592 TTCCGTATGCGATCCCTTTT 57.297 45.000 4.21 0.00 41.33 2.27
199 200 1.948104 TCCGTATGCGATCCCTTTTG 58.052 50.000 4.21 0.00 41.33 2.44
200 201 1.483004 TCCGTATGCGATCCCTTTTGA 59.517 47.619 4.21 0.00 41.33 2.69
201 202 2.104111 TCCGTATGCGATCCCTTTTGAT 59.896 45.455 4.21 0.00 41.33 2.57
202 203 3.322541 TCCGTATGCGATCCCTTTTGATA 59.677 43.478 4.21 0.00 41.33 2.15
203 204 3.432252 CCGTATGCGATCCCTTTTGATAC 59.568 47.826 4.21 0.00 41.33 2.24
204 205 4.307432 CGTATGCGATCCCTTTTGATACT 58.693 43.478 0.00 0.00 41.33 2.12
205 206 4.750098 CGTATGCGATCCCTTTTGATACTT 59.250 41.667 0.00 0.00 41.33 2.24
206 207 5.236478 CGTATGCGATCCCTTTTGATACTTT 59.764 40.000 0.00 0.00 41.33 2.66
207 208 5.757850 ATGCGATCCCTTTTGATACTTTC 57.242 39.130 0.00 0.00 0.00 2.62
208 209 3.621268 TGCGATCCCTTTTGATACTTTCG 59.379 43.478 0.00 0.00 0.00 3.46
209 210 3.869246 GCGATCCCTTTTGATACTTTCGA 59.131 43.478 0.00 0.00 0.00 3.71
210 211 4.511826 GCGATCCCTTTTGATACTTTCGAT 59.488 41.667 0.00 0.00 0.00 3.59
211 212 5.333416 GCGATCCCTTTTGATACTTTCGATC 60.333 44.000 0.00 0.00 0.00 3.69
212 213 5.753438 CGATCCCTTTTGATACTTTCGATCA 59.247 40.000 0.00 0.00 0.00 2.92
213 214 6.292381 CGATCCCTTTTGATACTTTCGATCAC 60.292 42.308 0.00 0.00 33.06 3.06
214 215 5.800296 TCCCTTTTGATACTTTCGATCACA 58.200 37.500 0.00 0.00 33.06 3.58
215 216 5.642063 TCCCTTTTGATACTTTCGATCACAC 59.358 40.000 0.00 0.00 33.06 3.82
216 217 5.445939 CCCTTTTGATACTTTCGATCACACG 60.446 44.000 0.00 0.00 33.06 4.49
217 218 4.577687 TTTGATACTTTCGATCACACGC 57.422 40.909 0.00 0.00 33.06 5.34
218 219 3.503827 TGATACTTTCGATCACACGCT 57.496 42.857 0.00 0.00 0.00 5.07
219 220 3.435566 TGATACTTTCGATCACACGCTC 58.564 45.455 0.00 0.00 0.00 5.03
220 221 2.273370 TACTTTCGATCACACGCTCC 57.727 50.000 0.00 0.00 0.00 4.70
221 222 0.317160 ACTTTCGATCACACGCTCCA 59.683 50.000 0.00 0.00 0.00 3.86
222 223 0.716108 CTTTCGATCACACGCTCCAC 59.284 55.000 0.00 0.00 0.00 4.02
223 224 0.669318 TTTCGATCACACGCTCCACC 60.669 55.000 0.00 0.00 0.00 4.61
224 225 1.532604 TTCGATCACACGCTCCACCT 61.533 55.000 0.00 0.00 0.00 4.00
225 226 1.079819 CGATCACACGCTCCACCTT 60.080 57.895 0.00 0.00 0.00 3.50
226 227 1.354337 CGATCACACGCTCCACCTTG 61.354 60.000 0.00 0.00 0.00 3.61
227 228 0.320771 GATCACACGCTCCACCTTGT 60.321 55.000 0.00 0.00 0.00 3.16
228 229 0.108585 ATCACACGCTCCACCTTGTT 59.891 50.000 0.00 0.00 0.00 2.83
229 230 0.813610 TCACACGCTCCACCTTGTTG 60.814 55.000 0.00 0.00 0.00 3.33
230 231 0.813610 CACACGCTCCACCTTGTTGA 60.814 55.000 0.00 0.00 0.00 3.18
231 232 0.814010 ACACGCTCCACCTTGTTGAC 60.814 55.000 0.00 0.00 0.00 3.18
232 233 1.594293 ACGCTCCACCTTGTTGACG 60.594 57.895 0.00 0.00 0.00 4.35
233 234 2.317609 CGCTCCACCTTGTTGACGG 61.318 63.158 0.00 0.00 0.00 4.79
234 235 1.227853 GCTCCACCTTGTTGACGGT 60.228 57.895 0.00 0.00 0.00 4.83
235 236 0.818040 GCTCCACCTTGTTGACGGTT 60.818 55.000 0.00 0.00 0.00 4.44
236 237 1.675552 CTCCACCTTGTTGACGGTTT 58.324 50.000 0.00 0.00 0.00 3.27
237 238 2.021457 CTCCACCTTGTTGACGGTTTT 58.979 47.619 0.00 0.00 0.00 2.43
238 239 2.425668 CTCCACCTTGTTGACGGTTTTT 59.574 45.455 0.00 0.00 0.00 1.94
239 240 3.618351 TCCACCTTGTTGACGGTTTTTA 58.382 40.909 0.00 0.00 0.00 1.52
240 241 3.628487 TCCACCTTGTTGACGGTTTTTAG 59.372 43.478 0.00 0.00 0.00 1.85
241 242 3.379057 CCACCTTGTTGACGGTTTTTAGT 59.621 43.478 0.00 0.00 0.00 2.24
242 243 4.575645 CCACCTTGTTGACGGTTTTTAGTA 59.424 41.667 0.00 0.00 0.00 1.82
243 244 5.504392 CACCTTGTTGACGGTTTTTAGTAC 58.496 41.667 0.00 0.00 0.00 2.73
244 245 4.576053 ACCTTGTTGACGGTTTTTAGTACC 59.424 41.667 0.00 0.00 0.00 3.34
245 246 4.575645 CCTTGTTGACGGTTTTTAGTACCA 59.424 41.667 0.00 0.00 35.31 3.25
246 247 5.239963 CCTTGTTGACGGTTTTTAGTACCAT 59.760 40.000 0.00 0.00 35.31 3.55
247 248 5.927954 TGTTGACGGTTTTTAGTACCATC 57.072 39.130 0.00 0.00 35.31 3.51
248 249 5.366460 TGTTGACGGTTTTTAGTACCATCA 58.634 37.500 0.00 0.00 36.20 3.07
249 250 5.821470 TGTTGACGGTTTTTAGTACCATCAA 59.179 36.000 0.00 0.00 43.30 2.57
250 251 6.487331 TGTTGACGGTTTTTAGTACCATCAAT 59.513 34.615 6.78 0.00 45.93 2.57
251 252 7.660617 TGTTGACGGTTTTTAGTACCATCAATA 59.339 33.333 6.78 2.21 45.93 1.90
252 253 7.837202 TGACGGTTTTTAGTACCATCAATAG 57.163 36.000 0.00 0.00 35.17 1.73
253 254 6.819649 TGACGGTTTTTAGTACCATCAATAGG 59.180 38.462 0.00 0.00 35.17 2.57
254 255 6.714278 ACGGTTTTTAGTACCATCAATAGGT 58.286 36.000 0.00 0.00 43.14 3.08
255 256 6.596497 ACGGTTTTTAGTACCATCAATAGGTG 59.404 38.462 0.00 0.00 40.26 4.00
256 257 6.457799 CGGTTTTTAGTACCATCAATAGGTGC 60.458 42.308 0.00 0.00 40.26 5.01
257 258 6.183360 GGTTTTTAGTACCATCAATAGGTGCC 60.183 42.308 0.00 0.00 41.97 5.01
258 259 4.699925 TTAGTACCATCAATAGGTGCCC 57.300 45.455 0.00 0.00 41.97 5.36
259 260 1.416401 AGTACCATCAATAGGTGCCCG 59.584 52.381 0.00 0.00 41.97 6.13
260 261 1.140252 GTACCATCAATAGGTGCCCGT 59.860 52.381 0.00 0.00 40.26 5.28
261 262 1.502690 ACCATCAATAGGTGCCCGTA 58.497 50.000 0.00 0.00 38.13 4.02
262 263 1.140252 ACCATCAATAGGTGCCCGTAC 59.860 52.381 0.00 0.00 38.13 3.67
263 264 1.140052 CCATCAATAGGTGCCCGTACA 59.860 52.381 0.00 0.00 0.00 2.90
264 265 2.210116 CATCAATAGGTGCCCGTACAC 58.790 52.381 0.00 0.00 39.94 2.90
265 266 1.268066 TCAATAGGTGCCCGTACACA 58.732 50.000 7.28 0.00 42.55 3.72
266 267 1.834896 TCAATAGGTGCCCGTACACAT 59.165 47.619 7.28 2.84 42.55 3.21
267 268 2.237643 TCAATAGGTGCCCGTACACATT 59.762 45.455 7.28 0.00 42.55 2.71
268 269 3.013921 CAATAGGTGCCCGTACACATTT 58.986 45.455 7.28 0.00 42.55 2.32
269 270 2.389962 TAGGTGCCCGTACACATTTC 57.610 50.000 7.28 0.00 42.55 2.17
270 271 0.398696 AGGTGCCCGTACACATTTCA 59.601 50.000 7.28 0.00 42.55 2.69
271 272 1.004277 AGGTGCCCGTACACATTTCAT 59.996 47.619 7.28 0.00 42.55 2.57
272 273 1.132262 GGTGCCCGTACACATTTCATG 59.868 52.381 7.28 0.00 42.55 3.07
273 274 2.080693 GTGCCCGTACACATTTCATGA 58.919 47.619 0.00 0.00 40.40 3.07
274 275 2.682856 GTGCCCGTACACATTTCATGAT 59.317 45.455 0.00 0.00 40.40 2.45
275 276 3.128589 GTGCCCGTACACATTTCATGATT 59.871 43.478 0.00 0.00 40.40 2.57
276 277 3.761218 TGCCCGTACACATTTCATGATTT 59.239 39.130 0.00 0.00 0.00 2.17
277 278 4.142491 TGCCCGTACACATTTCATGATTTC 60.142 41.667 0.00 0.00 0.00 2.17
278 279 4.096382 GCCCGTACACATTTCATGATTTCT 59.904 41.667 0.00 0.00 0.00 2.52
279 280 5.295787 GCCCGTACACATTTCATGATTTCTA 59.704 40.000 0.00 0.00 0.00 2.10
280 281 6.715464 CCCGTACACATTTCATGATTTCTAC 58.285 40.000 0.00 0.00 0.00 2.59
281 282 6.538742 CCCGTACACATTTCATGATTTCTACT 59.461 38.462 0.00 0.00 0.00 2.57
282 283 7.254455 CCCGTACACATTTCATGATTTCTACTC 60.254 40.741 0.00 0.00 0.00 2.59
283 284 7.277760 CCGTACACATTTCATGATTTCTACTCA 59.722 37.037 0.00 0.00 0.00 3.41
284 285 8.323854 CGTACACATTTCATGATTTCTACTCAG 58.676 37.037 0.00 0.00 0.00 3.35
285 286 7.081526 ACACATTTCATGATTTCTACTCAGC 57.918 36.000 0.00 0.00 0.00 4.26
286 287 6.883217 ACACATTTCATGATTTCTACTCAGCT 59.117 34.615 0.00 0.00 0.00 4.24
287 288 8.043113 ACACATTTCATGATTTCTACTCAGCTA 58.957 33.333 0.00 0.00 0.00 3.32
288 289 8.886719 CACATTTCATGATTTCTACTCAGCTAA 58.113 33.333 0.00 0.00 0.00 3.09
289 290 9.453572 ACATTTCATGATTTCTACTCAGCTAAA 57.546 29.630 0.00 0.00 0.00 1.85
293 294 9.725019 TTCATGATTTCTACTCAGCTAAAAAGA 57.275 29.630 0.00 0.00 0.00 2.52
294 295 9.896645 TCATGATTTCTACTCAGCTAAAAAGAT 57.103 29.630 0.00 0.00 0.00 2.40
295 296 9.932699 CATGATTTCTACTCAGCTAAAAAGATG 57.067 33.333 0.00 0.00 0.00 2.90
296 297 9.896645 ATGATTTCTACTCAGCTAAAAAGATGA 57.103 29.630 0.00 0.00 32.92 2.92
297 298 9.725019 TGATTTCTACTCAGCTAAAAAGATGAA 57.275 29.630 0.00 0.00 33.59 2.57
298 299 9.980780 GATTTCTACTCAGCTAAAAAGATGAAC 57.019 33.333 0.00 0.00 33.59 3.18
299 300 8.902540 TTTCTACTCAGCTAAAAAGATGAACA 57.097 30.769 0.00 0.00 33.59 3.18
300 301 7.891183 TCTACTCAGCTAAAAAGATGAACAC 57.109 36.000 0.00 0.00 33.59 3.32
301 302 7.441836 TCTACTCAGCTAAAAAGATGAACACA 58.558 34.615 0.00 0.00 33.59 3.72
302 303 6.942532 ACTCAGCTAAAAAGATGAACACAA 57.057 33.333 0.00 0.00 33.59 3.33
303 304 7.333528 ACTCAGCTAAAAAGATGAACACAAA 57.666 32.000 0.00 0.00 33.59 2.83
304 305 7.945134 ACTCAGCTAAAAAGATGAACACAAAT 58.055 30.769 0.00 0.00 33.59 2.32
305 306 9.066892 ACTCAGCTAAAAAGATGAACACAAATA 57.933 29.630 0.00 0.00 33.59 1.40
317 318 9.193133 AGATGAACACAAATATATGTACGTAGC 57.807 33.333 0.00 0.00 30.84 3.58
318 319 9.193133 GATGAACACAAATATATGTACGTAGCT 57.807 33.333 0.00 0.00 30.84 3.32
319 320 8.570096 TGAACACAAATATATGTACGTAGCTC 57.430 34.615 0.00 0.00 30.84 4.09
320 321 7.377662 TGAACACAAATATATGTACGTAGCTCG 59.622 37.037 0.00 0.00 46.00 5.03
321 322 6.962686 ACACAAATATATGTACGTAGCTCGA 58.037 36.000 11.64 0.00 43.23 4.04
322 323 7.420002 ACACAAATATATGTACGTAGCTCGAA 58.580 34.615 11.64 0.00 43.23 3.71
323 324 7.916977 ACACAAATATATGTACGTAGCTCGAAA 59.083 33.333 11.64 0.00 43.23 3.46
324 325 8.417928 CACAAATATATGTACGTAGCTCGAAAG 58.582 37.037 11.64 0.00 43.23 2.62
338 339 3.126831 CTCGAAAGCAACTATAGCTGGG 58.873 50.000 5.33 0.00 42.53 4.45
339 340 1.599542 CGAAAGCAACTATAGCTGGGC 59.400 52.381 5.33 1.96 42.53 5.36
340 341 1.599542 GAAAGCAACTATAGCTGGGCG 59.400 52.381 5.33 0.00 42.53 6.13
341 342 0.815615 AAGCAACTATAGCTGGGCGC 60.816 55.000 0.00 0.00 42.53 6.53
366 367 4.714802 TGCCCTATAGCTTCAACTAGACAA 59.285 41.667 0.00 0.00 0.00 3.18
371 372 7.097192 CCTATAGCTTCAACTAGACAACAACA 58.903 38.462 0.00 0.00 0.00 3.33
379 380 5.941058 TCAACTAGACAACAACAAACAAGGA 59.059 36.000 0.00 0.00 0.00 3.36
392 393 2.040544 CAAGGATCACCACCACCGC 61.041 63.158 0.00 0.00 38.94 5.68
416 419 4.315803 CACCGGAGAATTCAAGTAACACT 58.684 43.478 9.46 0.00 0.00 3.55
467 470 3.620488 TGGAGTAACATCAATTCCAGCC 58.380 45.455 0.00 0.00 33.21 4.85
490 493 1.000233 GTACGAGCGTTGACGAAGCA 61.000 55.000 7.85 0.00 43.02 3.91
506 509 2.859981 GCAGCAAACACCAGGTGGG 61.860 63.158 24.13 13.41 44.81 4.61
544 547 7.333174 TGAAGCAAAAGATTTTTCTTCCGTTTT 59.667 29.630 20.26 0.00 44.35 2.43
545 548 8.710835 AAGCAAAAGATTTTTCTTCCGTTTTA 57.289 26.923 0.00 0.00 29.78 1.52
546 549 8.126871 AGCAAAAGATTTTTCTTCCGTTTTAC 57.873 30.769 0.00 0.00 0.00 2.01
583 586 1.549203 ATGGCAAAGGACATCACACC 58.451 50.000 0.00 0.00 38.93 4.16
591 594 1.377725 GACATCACACCAGGGGCAG 60.378 63.158 0.00 0.00 0.00 4.85
612 615 0.889186 GGAGCCGCTTTTCAGTTCCA 60.889 55.000 0.00 0.00 0.00 3.53
644 647 3.307059 CGGGTCAGAGTTTGAATCCTTCT 60.307 47.826 3.79 0.00 37.61 2.85
645 648 4.006319 GGGTCAGAGTTTGAATCCTTCTG 58.994 47.826 0.00 0.00 37.61 3.02
650 653 6.254589 GTCAGAGTTTGAATCCTTCTGATACG 59.745 42.308 5.87 0.00 44.11 3.06
780 787 3.195396 CAGAGAAACAGAGAGAGAAGGGG 59.805 52.174 0.00 0.00 0.00 4.79
790 797 2.646798 AGAGAGAAGGGGATTTTGTGCT 59.353 45.455 0.00 0.00 0.00 4.40
810 817 3.217626 CTGTTCCAACTTCCAAGAAGCT 58.782 45.455 4.28 0.00 0.00 3.74
811 818 2.951642 TGTTCCAACTTCCAAGAAGCTG 59.048 45.455 4.28 2.84 0.00 4.24
812 819 3.214328 GTTCCAACTTCCAAGAAGCTGA 58.786 45.455 8.86 0.00 0.00 4.26
813 820 3.131709 TCCAACTTCCAAGAAGCTGAG 57.868 47.619 8.86 1.29 0.00 3.35
814 821 2.705658 TCCAACTTCCAAGAAGCTGAGA 59.294 45.455 8.86 3.22 0.00 3.27
815 822 3.072944 CCAACTTCCAAGAAGCTGAGAG 58.927 50.000 8.86 0.00 0.00 3.20
816 823 3.072944 CAACTTCCAAGAAGCTGAGAGG 58.927 50.000 4.28 0.00 0.00 3.69
817 824 1.627834 ACTTCCAAGAAGCTGAGAGGG 59.372 52.381 4.28 0.00 0.00 4.30
830 837 1.274708 TGAGAGGGGGAGAGAGAGAGA 60.275 57.143 0.00 0.00 0.00 3.10
854 861 3.868077 GCTTGAGCTTCGATCTATGTGTT 59.132 43.478 0.00 0.00 38.21 3.32
861 868 2.298610 TCGATCTATGTGTTCGGAGCT 58.701 47.619 0.00 0.00 38.15 4.09
864 871 0.894835 TCTATGTGTTCGGAGCTGCA 59.105 50.000 5.91 0.00 0.00 4.41
869 876 1.680735 TGTGTTCGGAGCTGCAATTTT 59.319 42.857 5.91 0.00 0.00 1.82
930 941 1.286248 TAGTTGGAGGGGAGAAAGCC 58.714 55.000 0.00 0.00 0.00 4.35
934 945 3.771160 GAGGGGAGAAAGCCGCGA 61.771 66.667 8.23 0.00 44.86 5.87
991 1002 1.229529 GAGGAGGGGTGGTGGAAGA 60.230 63.158 0.00 0.00 0.00 2.87
1023 1044 4.016706 GGGGTGGTGGTGGTCTCG 62.017 72.222 0.00 0.00 0.00 4.04
1064 1091 3.798511 GGGGAAGAAGAGGGGCGG 61.799 72.222 0.00 0.00 0.00 6.13
1065 1092 4.491409 GGGAAGAAGAGGGGCGGC 62.491 72.222 0.00 0.00 0.00 6.53
1066 1093 4.840005 GGAAGAAGAGGGGCGGCG 62.840 72.222 0.51 0.51 0.00 6.46
1067 1094 4.840005 GAAGAAGAGGGGCGGCGG 62.840 72.222 9.78 0.00 0.00 6.13
1529 1565 2.674796 AATCTACGGAGGTTGCTGAC 57.325 50.000 0.00 0.00 0.00 3.51
1571 1944 1.443194 CGTGCTGGTTGCTTGATGC 60.443 57.895 0.00 0.00 43.37 3.91
1624 1997 8.527810 TGTTAAAATTTCTTCACCTGTTCAAGT 58.472 29.630 0.00 0.00 0.00 3.16
1707 2082 0.606604 TCAGAAGTCCCAGTAACGGC 59.393 55.000 0.00 0.00 0.00 5.68
1790 2165 4.474651 TGGTTCAGTGGGATGATAGAACAT 59.525 41.667 0.00 0.00 37.64 2.71
1799 2174 7.050377 GTGGGATGATAGAACATCTTTTCTGA 58.950 38.462 0.00 0.00 44.02 3.27
1805 2180 9.798994 ATGATAGAACATCTTTTCTGAAAATGC 57.201 29.630 15.30 0.61 36.48 3.56
1807 2182 5.464168 AGAACATCTTTTCTGAAAATGCCG 58.536 37.500 15.30 5.01 34.40 5.69
1808 2183 4.853924 ACATCTTTTCTGAAAATGCCGT 57.146 36.364 15.30 8.31 0.00 5.68
1884 2259 5.782047 TGTTGTCATAAATTTGCCCTTCAG 58.218 37.500 0.00 0.00 0.00 3.02
1915 2290 2.084546 GCACATGGAGTTAACAGGACC 58.915 52.381 8.61 6.32 0.00 4.46
2025 2400 5.630680 GTGCACATGGAATTAACTTGAACAG 59.369 40.000 13.17 0.00 0.00 3.16
2026 2401 5.163513 GCACATGGAATTAACTTGAACAGG 58.836 41.667 0.00 0.00 0.00 4.00
2031 2406 7.926018 ACATGGAATTAACTTGAACAGGAAAAC 59.074 33.333 0.00 0.00 0.00 2.43
2094 2469 3.067106 CACAATTCACTAGACAAGGCGT 58.933 45.455 0.00 0.00 0.00 5.68
2095 2470 3.067106 ACAATTCACTAGACAAGGCGTG 58.933 45.455 0.00 0.00 0.00 5.34
2097 2472 2.433868 TTCACTAGACAAGGCGTGAC 57.566 50.000 7.60 0.26 36.25 3.67
2098 2473 1.617322 TCACTAGACAAGGCGTGACT 58.383 50.000 7.60 9.11 36.21 3.41
2133 2512 1.021202 TTTTTCCCAGTGCGAGTGTG 58.979 50.000 0.00 0.00 0.00 3.82
2145 2524 0.997226 CGAGTGTGTTCGGTGTCTCG 60.997 60.000 0.00 0.00 38.63 4.04
2228 2607 4.384056 CTTATGCAGGAGAGGTTGTATGG 58.616 47.826 0.00 0.00 0.00 2.74
2235 2614 0.912486 AGAGGTTGTATGGTCAGGGC 59.088 55.000 0.00 0.00 0.00 5.19
2281 2660 3.561725 GTCATTAGTTGCTCCATACCAGC 59.438 47.826 0.00 0.00 37.40 4.85
2314 2693 2.996155 GCATGAATTTGCTCATCCGAG 58.004 47.619 0.00 0.00 42.66 4.63
2774 3156 0.994247 ATGGCTGATGTTGTGGAGGA 59.006 50.000 0.00 0.00 0.00 3.71
2775 3157 0.325933 TGGCTGATGTTGTGGAGGAG 59.674 55.000 0.00 0.00 0.00 3.69
2776 3158 0.393537 GGCTGATGTTGTGGAGGAGG 60.394 60.000 0.00 0.00 0.00 4.30
2867 3250 5.480422 TCACTACATTAGTCTTCTTGCAGGA 59.520 40.000 0.00 0.00 36.76 3.86
3276 3660 3.083997 GGCGACCATCCCCTCACT 61.084 66.667 0.00 0.00 0.00 3.41
3438 3822 3.889815 CAAGGCATTGGAGGACATAGAA 58.110 45.455 2.43 0.00 32.43 2.10
3439 3823 3.853355 AGGCATTGGAGGACATAGAAG 57.147 47.619 0.00 0.00 0.00 2.85
3440 3824 3.387962 AGGCATTGGAGGACATAGAAGA 58.612 45.455 0.00 0.00 0.00 2.87
3441 3825 3.782523 AGGCATTGGAGGACATAGAAGAA 59.217 43.478 0.00 0.00 0.00 2.52
3606 3992 1.561076 TCTGCTGGTGCTTGGATATGT 59.439 47.619 0.00 0.00 40.48 2.29
3716 4103 4.492570 GCATTAGTGTGCACTCGATGTTAC 60.493 45.833 25.16 13.18 44.43 2.50
3844 4231 2.168106 AGCAGTGAGATGGCTTCAGTAG 59.832 50.000 0.00 0.00 33.21 2.57
3898 4285 4.996113 CAGCGAAACACGTTGCTT 57.004 50.000 0.00 0.00 44.86 3.91
3946 4333 5.708544 TCAATATACTCCCTCCGTTCCTAA 58.291 41.667 0.00 0.00 0.00 2.69
3959 4346 7.419865 CCCTCCGTTCCTAAATATAAGTCCTTT 60.420 40.741 0.00 0.00 0.00 3.11
3992 4379 7.658261 TCCACTATAAAGACTACATTCGGATG 58.342 38.462 0.88 0.88 39.25 3.51
3999 4386 9.909644 ATAAAGACTACATTCGGATGTATACAC 57.090 33.333 16.89 8.77 45.20 2.90
4000 4387 5.998553 AGACTACATTCGGATGTATACACG 58.001 41.667 16.89 8.61 45.20 4.49
4001 4388 5.530171 AGACTACATTCGGATGTATACACGT 59.470 40.000 16.89 10.75 45.20 4.49
4002 4389 6.039047 AGACTACATTCGGATGTATACACGTT 59.961 38.462 16.89 0.00 45.20 3.99
4008 4395 2.538449 CGGATGTATACACGTTGCCTTC 59.462 50.000 7.96 0.00 0.00 3.46
4020 4407 4.338682 CACGTTGCCTTCTAGAGTATAGGT 59.661 45.833 9.46 0.00 0.00 3.08
4022 4409 5.067544 ACGTTGCCTTCTAGAGTATAGGTTC 59.932 44.000 9.46 1.56 0.00 3.62
4023 4410 5.067413 CGTTGCCTTCTAGAGTATAGGTTCA 59.933 44.000 9.46 0.00 0.00 3.18
4024 4411 6.274579 GTTGCCTTCTAGAGTATAGGTTCAC 58.725 44.000 9.46 1.96 0.00 3.18
4025 4412 5.767670 TGCCTTCTAGAGTATAGGTTCACT 58.232 41.667 9.46 0.00 0.00 3.41
4325 4718 2.426431 TCCCAGTTACTTTCCCCTCA 57.574 50.000 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.162154 GGGGAACGAGGCCTAGGG 61.162 72.222 17.90 7.10 0.00 3.53
1 2 3.162154 GGGGGAACGAGGCCTAGG 61.162 72.222 17.90 3.67 0.00 3.02
2 3 1.272554 AAAGGGGGAACGAGGCCTAG 61.273 60.000 4.42 8.81 0.00 3.02
3 4 0.043032 TAAAGGGGGAACGAGGCCTA 59.957 55.000 4.42 0.00 0.00 3.93
4 5 0.623617 ATAAAGGGGGAACGAGGCCT 60.624 55.000 3.86 3.86 0.00 5.19
5 6 1.134228 TATAAAGGGGGAACGAGGCC 58.866 55.000 0.00 0.00 0.00 5.19
6 7 2.486727 CCTTATAAAGGGGGAACGAGGC 60.487 54.545 0.00 0.00 45.27 4.70
7 8 3.487120 CCTTATAAAGGGGGAACGAGG 57.513 52.381 0.00 0.00 45.27 4.63
18 19 4.003648 CCCATTAGCCTCGCCTTATAAAG 58.996 47.826 0.00 0.00 0.00 1.85
19 20 3.393278 ACCCATTAGCCTCGCCTTATAAA 59.607 43.478 0.00 0.00 0.00 1.40
20 21 2.976882 ACCCATTAGCCTCGCCTTATAA 59.023 45.455 0.00 0.00 0.00 0.98
21 22 2.616524 ACCCATTAGCCTCGCCTTATA 58.383 47.619 0.00 0.00 0.00 0.98
22 23 1.435256 ACCCATTAGCCTCGCCTTAT 58.565 50.000 0.00 0.00 0.00 1.73
23 24 1.968493 CTACCCATTAGCCTCGCCTTA 59.032 52.381 0.00 0.00 0.00 2.69
24 25 0.759346 CTACCCATTAGCCTCGCCTT 59.241 55.000 0.00 0.00 0.00 4.35
25 26 1.122019 CCTACCCATTAGCCTCGCCT 61.122 60.000 0.00 0.00 0.00 5.52
26 27 1.371558 CCTACCCATTAGCCTCGCC 59.628 63.158 0.00 0.00 0.00 5.54
27 28 0.033642 GACCTACCCATTAGCCTCGC 59.966 60.000 0.00 0.00 0.00 5.03
28 29 1.410004 TGACCTACCCATTAGCCTCG 58.590 55.000 0.00 0.00 0.00 4.63
29 30 2.772515 AGTTGACCTACCCATTAGCCTC 59.227 50.000 0.00 0.00 0.00 4.70
30 31 2.846950 AGTTGACCTACCCATTAGCCT 58.153 47.619 0.00 0.00 0.00 4.58
31 32 3.054655 TGAAGTTGACCTACCCATTAGCC 60.055 47.826 0.00 0.00 0.00 3.93
32 33 4.216411 TGAAGTTGACCTACCCATTAGC 57.784 45.455 0.00 0.00 0.00 3.09
33 34 6.659242 ACAAATGAAGTTGACCTACCCATTAG 59.341 38.462 0.00 0.00 32.59 1.73
34 35 6.548321 ACAAATGAAGTTGACCTACCCATTA 58.452 36.000 0.00 0.00 32.59 1.90
35 36 5.393866 ACAAATGAAGTTGACCTACCCATT 58.606 37.500 0.00 0.00 32.59 3.16
36 37 4.998051 ACAAATGAAGTTGACCTACCCAT 58.002 39.130 0.00 0.00 32.59 4.00
37 38 4.447138 ACAAATGAAGTTGACCTACCCA 57.553 40.909 0.00 0.00 32.59 4.51
38 39 5.293569 CGATACAAATGAAGTTGACCTACCC 59.706 44.000 0.00 0.00 32.59 3.69
39 40 5.293569 CCGATACAAATGAAGTTGACCTACC 59.706 44.000 0.00 0.00 32.59 3.18
40 41 5.293569 CCCGATACAAATGAAGTTGACCTAC 59.706 44.000 0.00 0.00 32.59 3.18
41 42 5.188163 TCCCGATACAAATGAAGTTGACCTA 59.812 40.000 0.00 0.00 32.59 3.08
42 43 4.019681 TCCCGATACAAATGAAGTTGACCT 60.020 41.667 0.00 0.00 32.59 3.85
43 44 4.258543 TCCCGATACAAATGAAGTTGACC 58.741 43.478 0.00 0.00 32.59 4.02
44 45 4.201822 GCTCCCGATACAAATGAAGTTGAC 60.202 45.833 0.00 0.00 32.59 3.18
45 46 3.938963 GCTCCCGATACAAATGAAGTTGA 59.061 43.478 0.00 0.00 32.59 3.18
46 47 3.689161 TGCTCCCGATACAAATGAAGTTG 59.311 43.478 0.00 0.00 34.52 3.16
47 48 3.689649 GTGCTCCCGATACAAATGAAGTT 59.310 43.478 0.00 0.00 0.00 2.66
48 49 3.270877 GTGCTCCCGATACAAATGAAGT 58.729 45.455 0.00 0.00 0.00 3.01
49 50 3.270027 TGTGCTCCCGATACAAATGAAG 58.730 45.455 0.00 0.00 0.00 3.02
50 51 3.342377 TGTGCTCCCGATACAAATGAA 57.658 42.857 0.00 0.00 0.00 2.57
51 52 3.558931 ATGTGCTCCCGATACAAATGA 57.441 42.857 0.00 0.00 0.00 2.57
52 53 4.393062 GGATATGTGCTCCCGATACAAATG 59.607 45.833 0.00 0.00 0.00 2.32
53 54 4.041567 TGGATATGTGCTCCCGATACAAAT 59.958 41.667 0.00 0.00 31.32 2.32
54 55 3.389656 TGGATATGTGCTCCCGATACAAA 59.610 43.478 0.00 0.00 31.32 2.83
55 56 2.969262 TGGATATGTGCTCCCGATACAA 59.031 45.455 0.00 0.00 31.32 2.41
56 57 2.299013 GTGGATATGTGCTCCCGATACA 59.701 50.000 0.00 0.00 31.32 2.29
57 58 2.671351 CGTGGATATGTGCTCCCGATAC 60.671 54.545 0.00 0.00 31.93 2.24
58 59 1.544246 CGTGGATATGTGCTCCCGATA 59.456 52.381 0.00 0.00 31.93 2.92
59 60 0.318441 CGTGGATATGTGCTCCCGAT 59.682 55.000 0.00 0.00 31.93 4.18
60 61 1.739667 CGTGGATATGTGCTCCCGA 59.260 57.895 0.00 0.00 31.93 5.14
61 62 1.956170 GCGTGGATATGTGCTCCCG 60.956 63.158 0.00 0.00 32.81 5.14
62 63 0.250467 ATGCGTGGATATGTGCTCCC 60.250 55.000 0.00 0.00 31.32 4.30
63 64 2.455674 TATGCGTGGATATGTGCTCC 57.544 50.000 0.00 0.00 0.00 4.70
64 65 7.254455 GGTTATAATATGCGTGGATATGTGCTC 60.254 40.741 0.00 0.00 0.00 4.26
65 66 6.538742 GGTTATAATATGCGTGGATATGTGCT 59.461 38.462 0.00 0.00 0.00 4.40
66 67 6.238374 GGGTTATAATATGCGTGGATATGTGC 60.238 42.308 0.00 0.00 0.00 4.57
67 68 6.260050 GGGGTTATAATATGCGTGGATATGTG 59.740 42.308 0.00 0.00 0.00 3.21
68 69 6.354130 GGGGTTATAATATGCGTGGATATGT 58.646 40.000 0.00 0.00 0.00 2.29
69 70 5.763204 GGGGGTTATAATATGCGTGGATATG 59.237 44.000 0.00 0.00 0.00 1.78
70 71 5.670361 AGGGGGTTATAATATGCGTGGATAT 59.330 40.000 0.00 0.00 0.00 1.63
71 72 5.034200 AGGGGGTTATAATATGCGTGGATA 58.966 41.667 0.00 0.00 0.00 2.59
72 73 3.850173 AGGGGGTTATAATATGCGTGGAT 59.150 43.478 0.00 0.00 0.00 3.41
73 74 3.253220 AGGGGGTTATAATATGCGTGGA 58.747 45.455 0.00 0.00 0.00 4.02
74 75 3.008594 TGAGGGGGTTATAATATGCGTGG 59.991 47.826 0.00 0.00 0.00 4.94
75 76 4.000988 GTGAGGGGGTTATAATATGCGTG 58.999 47.826 0.00 0.00 0.00 5.34
76 77 3.306502 CGTGAGGGGGTTATAATATGCGT 60.307 47.826 0.00 0.00 0.00 5.24
77 78 3.259064 CGTGAGGGGGTTATAATATGCG 58.741 50.000 0.00 0.00 0.00 4.73
78 79 3.007635 GCGTGAGGGGGTTATAATATGC 58.992 50.000 0.00 0.00 0.00 3.14
79 80 3.259064 CGCGTGAGGGGGTTATAATATG 58.741 50.000 0.00 0.00 40.85 1.78
80 81 2.354403 GCGCGTGAGGGGGTTATAATAT 60.354 50.000 8.43 0.00 45.27 1.28
81 82 1.001181 GCGCGTGAGGGGGTTATAATA 59.999 52.381 8.43 0.00 45.27 0.98
82 83 0.250166 GCGCGTGAGGGGGTTATAAT 60.250 55.000 8.43 0.00 45.27 1.28
83 84 1.144496 GCGCGTGAGGGGGTTATAA 59.856 57.895 8.43 0.00 45.27 0.98
84 85 2.816718 GCGCGTGAGGGGGTTATA 59.183 61.111 8.43 0.00 45.27 0.98
92 93 3.175976 AAAAACACCGCGCGTGAGG 62.176 57.895 29.95 17.76 46.20 3.86
93 94 1.721133 GAAAAACACCGCGCGTGAG 60.721 57.895 29.95 19.90 46.20 3.51
94 95 2.325166 GAAAAACACCGCGCGTGA 59.675 55.556 29.95 0.00 46.20 4.35
96 97 3.956317 GGGAAAAACACCGCGCGT 61.956 61.111 29.95 14.24 0.00 6.01
97 98 3.955101 TGGGAAAAACACCGCGCG 61.955 61.111 25.67 25.67 0.00 6.86
98 99 2.354188 GTGGGAAAAACACCGCGC 60.354 61.111 0.00 0.00 32.80 6.86
99 100 0.031449 ATTGTGGGAAAAACACCGCG 59.969 50.000 0.00 0.00 40.09 6.46
100 101 1.067821 TGATTGTGGGAAAAACACCGC 59.932 47.619 0.00 0.00 38.05 5.68
101 102 3.444703 TTGATTGTGGGAAAAACACCG 57.555 42.857 0.00 0.00 38.05 4.94
102 103 7.519809 GCTTTAATTGATTGTGGGAAAAACACC 60.520 37.037 0.00 0.00 38.05 4.16
103 104 7.011857 TGCTTTAATTGATTGTGGGAAAAACAC 59.988 33.333 0.00 0.00 39.26 3.32
104 105 7.050377 TGCTTTAATTGATTGTGGGAAAAACA 58.950 30.769 0.00 0.00 0.00 2.83
105 106 7.489574 TGCTTTAATTGATTGTGGGAAAAAC 57.510 32.000 0.00 0.00 0.00 2.43
106 107 8.511604 TTTGCTTTAATTGATTGTGGGAAAAA 57.488 26.923 0.00 0.00 0.00 1.94
107 108 8.401709 GTTTTGCTTTAATTGATTGTGGGAAAA 58.598 29.630 0.00 0.00 0.00 2.29
108 109 7.772757 AGTTTTGCTTTAATTGATTGTGGGAAA 59.227 29.630 0.00 0.00 0.00 3.13
109 110 7.278875 AGTTTTGCTTTAATTGATTGTGGGAA 58.721 30.769 0.00 0.00 0.00 3.97
110 111 6.825610 AGTTTTGCTTTAATTGATTGTGGGA 58.174 32.000 0.00 0.00 0.00 4.37
111 112 8.087750 TCTAGTTTTGCTTTAATTGATTGTGGG 58.912 33.333 0.00 0.00 0.00 4.61
112 113 9.474920 TTCTAGTTTTGCTTTAATTGATTGTGG 57.525 29.630 0.00 0.00 0.00 4.17
114 115 9.180678 CGTTCTAGTTTTGCTTTAATTGATTGT 57.819 29.630 0.00 0.00 0.00 2.71
115 116 8.638565 CCGTTCTAGTTTTGCTTTAATTGATTG 58.361 33.333 0.00 0.00 0.00 2.67
116 117 8.357402 ACCGTTCTAGTTTTGCTTTAATTGATT 58.643 29.630 0.00 0.00 0.00 2.57
117 118 7.807907 CACCGTTCTAGTTTTGCTTTAATTGAT 59.192 33.333 0.00 0.00 0.00 2.57
118 119 7.136119 CACCGTTCTAGTTTTGCTTTAATTGA 58.864 34.615 0.00 0.00 0.00 2.57
119 120 6.915843 ACACCGTTCTAGTTTTGCTTTAATTG 59.084 34.615 0.00 0.00 0.00 2.32
120 121 7.034685 ACACCGTTCTAGTTTTGCTTTAATT 57.965 32.000 0.00 0.00 0.00 1.40
121 122 6.628919 ACACCGTTCTAGTTTTGCTTTAAT 57.371 33.333 0.00 0.00 0.00 1.40
122 123 6.439675 AACACCGTTCTAGTTTTGCTTTAA 57.560 33.333 0.00 0.00 0.00 1.52
123 124 6.018016 GGTAACACCGTTCTAGTTTTGCTTTA 60.018 38.462 0.00 0.00 0.00 1.85
124 125 4.976224 AACACCGTTCTAGTTTTGCTTT 57.024 36.364 0.00 0.00 0.00 3.51
125 126 4.274214 GGTAACACCGTTCTAGTTTTGCTT 59.726 41.667 0.00 0.00 0.00 3.91
126 127 3.811497 GGTAACACCGTTCTAGTTTTGCT 59.189 43.478 0.00 0.00 0.00 3.91
127 128 3.811497 AGGTAACACCGTTCTAGTTTTGC 59.189 43.478 0.00 0.00 44.90 3.68
128 129 5.996669 AAGGTAACACCGTTCTAGTTTTG 57.003 39.130 0.00 0.00 44.90 2.44
129 130 6.483307 GGTTAAGGTAACACCGTTCTAGTTTT 59.517 38.462 0.96 0.00 44.90 2.43
130 131 5.991606 GGTTAAGGTAACACCGTTCTAGTTT 59.008 40.000 0.96 0.00 44.90 2.66
131 132 5.305386 AGGTTAAGGTAACACCGTTCTAGTT 59.695 40.000 0.96 0.00 44.90 2.24
132 133 4.835056 AGGTTAAGGTAACACCGTTCTAGT 59.165 41.667 0.96 0.00 44.90 2.57
133 134 5.047802 TGAGGTTAAGGTAACACCGTTCTAG 60.048 44.000 0.96 0.00 44.90 2.43
134 135 4.832266 TGAGGTTAAGGTAACACCGTTCTA 59.168 41.667 0.96 0.00 44.90 2.10
135 136 3.642848 TGAGGTTAAGGTAACACCGTTCT 59.357 43.478 0.96 0.00 44.90 3.01
136 137 3.992427 CTGAGGTTAAGGTAACACCGTTC 59.008 47.826 0.96 0.00 44.90 3.95
137 138 3.244318 CCTGAGGTTAAGGTAACACCGTT 60.244 47.826 0.00 0.00 44.90 4.44
138 139 2.301009 CCTGAGGTTAAGGTAACACCGT 59.699 50.000 0.00 0.00 44.90 4.83
139 140 2.564062 TCCTGAGGTTAAGGTAACACCG 59.436 50.000 0.00 0.00 44.90 4.94
140 141 3.581770 AGTCCTGAGGTTAAGGTAACACC 59.418 47.826 0.00 0.00 40.39 4.16
141 142 4.282703 TGAGTCCTGAGGTTAAGGTAACAC 59.717 45.833 0.00 0.00 40.39 3.32
142 143 4.485875 TGAGTCCTGAGGTTAAGGTAACA 58.514 43.478 0.00 0.00 40.39 2.41
143 144 4.771054 TCTGAGTCCTGAGGTTAAGGTAAC 59.229 45.833 0.00 0.00 36.14 2.50
144 145 4.771054 GTCTGAGTCCTGAGGTTAAGGTAA 59.229 45.833 0.00 0.00 36.14 2.85
145 146 4.342359 GTCTGAGTCCTGAGGTTAAGGTA 58.658 47.826 0.00 0.00 36.14 3.08
146 147 3.166679 GTCTGAGTCCTGAGGTTAAGGT 58.833 50.000 0.00 0.00 36.14 3.50
147 148 2.498078 GGTCTGAGTCCTGAGGTTAAGG 59.502 54.545 0.00 0.00 36.02 2.69
148 149 3.436243 AGGTCTGAGTCCTGAGGTTAAG 58.564 50.000 0.00 0.00 33.62 1.85
149 150 3.544698 AGGTCTGAGTCCTGAGGTTAA 57.455 47.619 0.00 0.00 33.62 2.01
150 151 3.850774 TCTAGGTCTGAGTCCTGAGGTTA 59.149 47.826 8.55 0.00 36.60 2.85
151 152 2.650322 TCTAGGTCTGAGTCCTGAGGTT 59.350 50.000 8.55 0.00 36.60 3.50
152 153 2.280103 TCTAGGTCTGAGTCCTGAGGT 58.720 52.381 8.55 0.00 36.60 3.85
153 154 3.593442 ATCTAGGTCTGAGTCCTGAGG 57.407 52.381 8.55 0.00 36.60 3.86
154 155 7.595819 AATTTATCTAGGTCTGAGTCCTGAG 57.404 40.000 8.55 2.92 36.60 3.35
155 156 7.979786 AAATTTATCTAGGTCTGAGTCCTGA 57.020 36.000 8.55 4.73 36.60 3.86
156 157 7.713073 GGAAAATTTATCTAGGTCTGAGTCCTG 59.287 40.741 8.55 0.00 36.60 3.86
157 158 7.418025 CGGAAAATTTATCTAGGTCTGAGTCCT 60.418 40.741 3.32 3.32 38.91 3.85
158 159 6.702282 CGGAAAATTTATCTAGGTCTGAGTCC 59.298 42.308 0.00 0.00 0.00 3.85
159 160 7.266400 ACGGAAAATTTATCTAGGTCTGAGTC 58.734 38.462 0.00 0.00 0.00 3.36
160 161 7.184067 ACGGAAAATTTATCTAGGTCTGAGT 57.816 36.000 0.00 0.00 0.00 3.41
161 162 9.197694 CATACGGAAAATTTATCTAGGTCTGAG 57.802 37.037 0.00 0.00 0.00 3.35
162 163 7.656137 GCATACGGAAAATTTATCTAGGTCTGA 59.344 37.037 0.00 0.00 0.00 3.27
163 164 7.359264 CGCATACGGAAAATTTATCTAGGTCTG 60.359 40.741 0.00 0.00 34.97 3.51
164 165 6.645415 CGCATACGGAAAATTTATCTAGGTCT 59.355 38.462 0.00 0.00 34.97 3.85
165 166 6.643770 TCGCATACGGAAAATTTATCTAGGTC 59.356 38.462 0.00 0.00 40.63 3.85
166 167 6.518493 TCGCATACGGAAAATTTATCTAGGT 58.482 36.000 0.00 0.00 40.63 3.08
167 168 7.201530 GGATCGCATACGGAAAATTTATCTAGG 60.202 40.741 0.00 0.00 40.63 3.02
168 169 7.201530 GGGATCGCATACGGAAAATTTATCTAG 60.202 40.741 4.64 0.00 40.63 2.43
169 170 6.592607 GGGATCGCATACGGAAAATTTATCTA 59.407 38.462 4.64 0.00 40.63 1.98
170 171 5.411669 GGGATCGCATACGGAAAATTTATCT 59.588 40.000 4.64 0.00 40.63 1.98
171 172 5.411669 AGGGATCGCATACGGAAAATTTATC 59.588 40.000 12.83 0.00 40.63 1.75
172 173 5.313712 AGGGATCGCATACGGAAAATTTAT 58.686 37.500 12.83 0.00 40.63 1.40
173 174 4.710324 AGGGATCGCATACGGAAAATTTA 58.290 39.130 12.83 0.00 40.63 1.40
174 175 3.551846 AGGGATCGCATACGGAAAATTT 58.448 40.909 12.83 0.00 40.63 1.82
175 176 3.208747 AGGGATCGCATACGGAAAATT 57.791 42.857 12.83 0.00 40.63 1.82
176 177 2.930826 AGGGATCGCATACGGAAAAT 57.069 45.000 12.83 0.00 40.63 1.82
177 178 2.702592 AAGGGATCGCATACGGAAAA 57.297 45.000 12.83 0.00 40.63 2.29
178 179 2.680841 CAAAAGGGATCGCATACGGAAA 59.319 45.455 12.83 0.00 40.63 3.13
179 180 2.093394 TCAAAAGGGATCGCATACGGAA 60.093 45.455 12.83 0.00 40.63 4.30
180 181 1.483004 TCAAAAGGGATCGCATACGGA 59.517 47.619 12.83 0.25 40.63 4.69
181 182 1.948104 TCAAAAGGGATCGCATACGG 58.052 50.000 12.83 0.00 40.63 4.02
182 183 4.307432 AGTATCAAAAGGGATCGCATACG 58.693 43.478 12.83 0.00 42.01 3.06
183 184 6.564125 CGAAAGTATCAAAAGGGATCGCATAC 60.564 42.308 12.83 10.17 0.00 2.39
184 185 5.465390 CGAAAGTATCAAAAGGGATCGCATA 59.535 40.000 12.83 0.00 0.00 3.14
185 186 4.273480 CGAAAGTATCAAAAGGGATCGCAT 59.727 41.667 12.83 0.00 0.00 4.73
186 187 3.621268 CGAAAGTATCAAAAGGGATCGCA 59.379 43.478 12.83 0.00 0.00 5.10
187 188 3.869246 TCGAAAGTATCAAAAGGGATCGC 59.131 43.478 0.54 0.54 0.00 4.58
188 189 5.753438 TGATCGAAAGTATCAAAAGGGATCG 59.247 40.000 0.00 0.00 32.53 3.69
189 190 6.538742 TGTGATCGAAAGTATCAAAAGGGATC 59.461 38.462 0.00 0.00 35.23 3.36
190 191 6.316390 GTGTGATCGAAAGTATCAAAAGGGAT 59.684 38.462 0.00 0.00 35.23 3.85
191 192 5.642063 GTGTGATCGAAAGTATCAAAAGGGA 59.358 40.000 0.00 0.00 35.23 4.20
192 193 5.445939 CGTGTGATCGAAAGTATCAAAAGGG 60.446 44.000 0.00 0.00 35.23 3.95
193 194 5.550981 CGTGTGATCGAAAGTATCAAAAGG 58.449 41.667 0.00 0.00 35.23 3.11
194 195 5.015733 GCGTGTGATCGAAAGTATCAAAAG 58.984 41.667 0.00 0.00 35.23 2.27
195 196 4.688879 AGCGTGTGATCGAAAGTATCAAAA 59.311 37.500 0.00 0.00 35.23 2.44
196 197 4.242475 AGCGTGTGATCGAAAGTATCAAA 58.758 39.130 0.00 0.00 35.23 2.69
197 198 3.845178 AGCGTGTGATCGAAAGTATCAA 58.155 40.909 0.00 0.00 35.23 2.57
198 199 3.435566 GAGCGTGTGATCGAAAGTATCA 58.564 45.455 0.00 0.00 0.00 2.15
199 200 2.789893 GGAGCGTGTGATCGAAAGTATC 59.210 50.000 0.00 0.00 0.00 2.24
200 201 2.165641 TGGAGCGTGTGATCGAAAGTAT 59.834 45.455 0.00 0.00 0.00 2.12
201 202 1.542472 TGGAGCGTGTGATCGAAAGTA 59.458 47.619 0.00 0.00 0.00 2.24
202 203 0.317160 TGGAGCGTGTGATCGAAAGT 59.683 50.000 0.00 0.00 0.00 2.66
203 204 0.716108 GTGGAGCGTGTGATCGAAAG 59.284 55.000 0.00 0.00 0.00 2.62
204 205 0.669318 GGTGGAGCGTGTGATCGAAA 60.669 55.000 0.00 0.00 0.00 3.46
205 206 1.080093 GGTGGAGCGTGTGATCGAA 60.080 57.895 0.00 0.00 0.00 3.71
206 207 1.532604 AAGGTGGAGCGTGTGATCGA 61.533 55.000 0.00 0.00 0.00 3.59
207 208 1.079819 AAGGTGGAGCGTGTGATCG 60.080 57.895 0.00 0.00 0.00 3.69
208 209 0.320771 ACAAGGTGGAGCGTGTGATC 60.321 55.000 0.00 0.00 0.00 2.92
209 210 0.108585 AACAAGGTGGAGCGTGTGAT 59.891 50.000 0.00 0.00 0.00 3.06
210 211 0.813610 CAACAAGGTGGAGCGTGTGA 60.814 55.000 0.00 0.00 0.00 3.58
211 212 0.813610 TCAACAAGGTGGAGCGTGTG 60.814 55.000 0.00 0.00 0.00 3.82
212 213 0.814010 GTCAACAAGGTGGAGCGTGT 60.814 55.000 0.00 0.00 0.00 4.49
213 214 1.831389 CGTCAACAAGGTGGAGCGTG 61.831 60.000 0.00 0.00 0.00 5.34
214 215 1.594293 CGTCAACAAGGTGGAGCGT 60.594 57.895 0.00 0.00 0.00 5.07
215 216 2.317609 CCGTCAACAAGGTGGAGCG 61.318 63.158 0.00 0.00 0.00 5.03
216 217 0.818040 AACCGTCAACAAGGTGGAGC 60.818 55.000 0.00 0.00 41.21 4.70
217 218 1.675552 AAACCGTCAACAAGGTGGAG 58.324 50.000 0.00 0.00 41.21 3.86
218 219 2.131776 AAAACCGTCAACAAGGTGGA 57.868 45.000 0.00 0.00 41.21 4.02
219 220 2.951457 AAAAACCGTCAACAAGGTGG 57.049 45.000 0.00 0.00 41.21 4.61
220 221 4.625972 ACTAAAAACCGTCAACAAGGTG 57.374 40.909 0.00 0.00 41.21 4.00
221 222 4.576053 GGTACTAAAAACCGTCAACAAGGT 59.424 41.667 0.00 0.00 43.68 3.50
222 223 4.575645 TGGTACTAAAAACCGTCAACAAGG 59.424 41.667 0.00 0.00 40.08 3.61
223 224 5.738118 TGGTACTAAAAACCGTCAACAAG 57.262 39.130 0.00 0.00 40.08 3.16
230 231 6.596497 CACCTATTGATGGTACTAAAAACCGT 59.404 38.462 0.00 0.00 40.08 4.83
231 232 6.457799 GCACCTATTGATGGTACTAAAAACCG 60.458 42.308 0.00 0.00 40.08 4.44
232 233 6.183360 GGCACCTATTGATGGTACTAAAAACC 60.183 42.308 0.00 0.00 35.80 3.27
233 234 6.792326 GGCACCTATTGATGGTACTAAAAAC 58.208 40.000 0.00 0.00 35.80 2.43
247 248 8.591284 CATGAAATGTGTACGGGCACCTATTG 62.591 46.154 8.73 0.00 43.92 1.90
248 249 6.660847 CATGAAATGTGTACGGGCACCTATT 61.661 44.000 8.73 1.67 43.92 1.73
249 250 5.221380 CATGAAATGTGTACGGGCACCTAT 61.221 45.833 8.73 0.00 43.92 2.57
250 251 3.929277 CATGAAATGTGTACGGGCACCTA 60.929 47.826 8.73 0.00 43.92 3.08
251 252 3.198844 CATGAAATGTGTACGGGCACCT 61.199 50.000 8.73 0.00 43.92 4.00
252 253 1.132262 CATGAAATGTGTACGGGCACC 59.868 52.381 8.73 0.00 42.97 5.01
253 254 2.080693 TCATGAAATGTGTACGGGCAC 58.919 47.619 0.00 4.91 46.80 5.01
254 255 2.481289 TCATGAAATGTGTACGGGCA 57.519 45.000 0.00 0.00 46.80 5.36
255 256 4.096382 AGAAATCATGAAATGTGTACGGGC 59.904 41.667 0.00 0.00 46.80 6.13
256 257 5.818136 AGAAATCATGAAATGTGTACGGG 57.182 39.130 0.00 0.00 46.80 5.28
257 258 7.277760 TGAGTAGAAATCATGAAATGTGTACGG 59.722 37.037 0.00 0.00 46.80 4.02
258 259 8.185003 TGAGTAGAAATCATGAAATGTGTACG 57.815 34.615 0.00 0.00 46.80 3.67
259 260 8.119226 GCTGAGTAGAAATCATGAAATGTGTAC 58.881 37.037 0.00 0.00 46.80 2.90
260 261 8.043113 AGCTGAGTAGAAATCATGAAATGTGTA 58.957 33.333 0.00 0.00 46.80 2.90
261 262 6.883217 AGCTGAGTAGAAATCATGAAATGTGT 59.117 34.615 0.00 0.00 46.80 3.72
262 263 7.317842 AGCTGAGTAGAAATCATGAAATGTG 57.682 36.000 0.00 0.00 46.80 3.21
263 264 9.453572 TTTAGCTGAGTAGAAATCATGAAATGT 57.546 29.630 0.00 0.00 46.80 2.71
267 268 9.725019 TCTTTTTAGCTGAGTAGAAATCATGAA 57.275 29.630 0.00 0.00 0.00 2.57
268 269 9.896645 ATCTTTTTAGCTGAGTAGAAATCATGA 57.103 29.630 0.00 0.00 0.00 3.07
269 270 9.932699 CATCTTTTTAGCTGAGTAGAAATCATG 57.067 33.333 0.00 0.00 0.00 3.07
270 271 9.896645 TCATCTTTTTAGCTGAGTAGAAATCAT 57.103 29.630 0.00 0.00 0.00 2.45
271 272 9.725019 TTCATCTTTTTAGCTGAGTAGAAATCA 57.275 29.630 0.00 0.00 0.00 2.57
272 273 9.980780 GTTCATCTTTTTAGCTGAGTAGAAATC 57.019 33.333 0.00 0.00 0.00 2.17
273 274 9.507329 TGTTCATCTTTTTAGCTGAGTAGAAAT 57.493 29.630 0.00 0.00 0.00 2.17
274 275 8.774586 GTGTTCATCTTTTTAGCTGAGTAGAAA 58.225 33.333 0.00 0.00 0.00 2.52
275 276 7.931407 TGTGTTCATCTTTTTAGCTGAGTAGAA 59.069 33.333 0.00 0.00 0.00 2.10
276 277 7.441836 TGTGTTCATCTTTTTAGCTGAGTAGA 58.558 34.615 0.00 0.00 0.00 2.59
277 278 7.658179 TGTGTTCATCTTTTTAGCTGAGTAG 57.342 36.000 0.00 0.00 0.00 2.57
278 279 8.445275 TTTGTGTTCATCTTTTTAGCTGAGTA 57.555 30.769 0.00 0.00 0.00 2.59
279 280 6.942532 TTGTGTTCATCTTTTTAGCTGAGT 57.057 33.333 0.00 0.00 0.00 3.41
291 292 9.193133 GCTACGTACATATATTTGTGTTCATCT 57.807 33.333 8.85 0.00 0.00 2.90
292 293 9.193133 AGCTACGTACATATATTTGTGTTCATC 57.807 33.333 8.85 0.00 0.00 2.92
293 294 9.193133 GAGCTACGTACATATATTTGTGTTCAT 57.807 33.333 8.85 0.00 0.00 2.57
294 295 7.377662 CGAGCTACGTACATATATTTGTGTTCA 59.622 37.037 8.85 0.00 37.22 3.18
295 296 7.588854 TCGAGCTACGTACATATATTTGTGTTC 59.411 37.037 8.85 0.00 43.13 3.18
296 297 7.420002 TCGAGCTACGTACATATATTTGTGTT 58.580 34.615 8.85 0.00 43.13 3.32
297 298 6.962686 TCGAGCTACGTACATATATTTGTGT 58.037 36.000 8.85 2.56 43.13 3.72
298 299 7.847166 TTCGAGCTACGTACATATATTTGTG 57.153 36.000 8.85 0.00 43.13 3.33
299 300 7.114529 GCTTTCGAGCTACGTACATATATTTGT 59.885 37.037 4.19 4.19 43.13 2.83
300 301 7.114388 TGCTTTCGAGCTACGTACATATATTTG 59.886 37.037 0.00 0.00 43.13 2.32
301 302 7.143340 TGCTTTCGAGCTACGTACATATATTT 58.857 34.615 0.00 0.00 43.13 1.40
302 303 6.675026 TGCTTTCGAGCTACGTACATATATT 58.325 36.000 0.00 0.00 43.13 1.28
303 304 6.250344 TGCTTTCGAGCTACGTACATATAT 57.750 37.500 0.00 0.00 43.13 0.86
304 305 5.678132 TGCTTTCGAGCTACGTACATATA 57.322 39.130 0.00 0.00 43.13 0.86
305 306 4.563337 TGCTTTCGAGCTACGTACATAT 57.437 40.909 0.00 0.00 43.13 1.78
306 307 4.100529 GTTGCTTTCGAGCTACGTACATA 58.899 43.478 0.00 0.00 43.13 2.29
307 308 2.921754 GTTGCTTTCGAGCTACGTACAT 59.078 45.455 0.00 0.00 43.13 2.29
308 309 2.030540 AGTTGCTTTCGAGCTACGTACA 60.031 45.455 7.20 0.00 43.34 2.90
309 310 2.593257 AGTTGCTTTCGAGCTACGTAC 58.407 47.619 7.20 0.00 43.34 3.67
310 311 4.627611 ATAGTTGCTTTCGAGCTACGTA 57.372 40.909 7.20 0.00 43.34 3.57
311 312 3.505464 ATAGTTGCTTTCGAGCTACGT 57.495 42.857 0.00 0.00 43.34 3.57
312 313 3.422546 GCTATAGTTGCTTTCGAGCTACG 59.577 47.826 0.84 0.00 43.34 3.51
313 314 4.442733 CAGCTATAGTTGCTTTCGAGCTAC 59.557 45.833 3.46 5.11 38.92 3.58
314 315 4.499865 CCAGCTATAGTTGCTTTCGAGCTA 60.500 45.833 10.88 0.00 38.92 3.32
315 316 3.452474 CAGCTATAGTTGCTTTCGAGCT 58.548 45.455 3.46 0.00 38.92 4.09
316 317 2.541762 CCAGCTATAGTTGCTTTCGAGC 59.458 50.000 10.88 0.00 38.92 5.03
317 318 3.126831 CCCAGCTATAGTTGCTTTCGAG 58.873 50.000 10.88 0.00 38.92 4.04
318 319 2.741878 GCCCAGCTATAGTTGCTTTCGA 60.742 50.000 10.88 0.00 38.92 3.71
319 320 1.599542 GCCCAGCTATAGTTGCTTTCG 59.400 52.381 10.88 0.00 38.92 3.46
320 321 1.599542 CGCCCAGCTATAGTTGCTTTC 59.400 52.381 10.88 0.00 38.92 2.62
321 322 1.668419 CGCCCAGCTATAGTTGCTTT 58.332 50.000 10.88 0.00 38.92 3.51
322 323 0.815615 GCGCCCAGCTATAGTTGCTT 60.816 55.000 10.88 0.00 44.04 3.91
323 324 1.227674 GCGCCCAGCTATAGTTGCT 60.228 57.895 10.88 0.00 44.04 3.91
324 325 3.334463 GCGCCCAGCTATAGTTGC 58.666 61.111 10.88 0.34 44.04 4.17
338 339 0.532862 TGAAGCTATAGGGCAAGCGC 60.533 55.000 0.00 0.00 43.63 5.92
339 340 1.599542 GTTGAAGCTATAGGGCAAGCG 59.400 52.381 1.04 0.00 43.63 4.68
340 341 2.924421 AGTTGAAGCTATAGGGCAAGC 58.076 47.619 1.04 0.00 39.08 4.01
341 342 5.163405 TGTCTAGTTGAAGCTATAGGGCAAG 60.163 44.000 1.04 0.00 34.17 4.01
342 343 4.714802 TGTCTAGTTGAAGCTATAGGGCAA 59.285 41.667 1.04 0.00 34.17 4.52
343 344 4.286707 TGTCTAGTTGAAGCTATAGGGCA 58.713 43.478 1.04 0.00 34.17 5.36
344 345 4.939052 TGTCTAGTTGAAGCTATAGGGC 57.061 45.455 1.04 0.00 0.00 5.19
353 354 6.747280 CCTTGTTTGTTGTTGTCTAGTTGAAG 59.253 38.462 0.00 0.00 0.00 3.02
366 367 2.693074 GGTGGTGATCCTTGTTTGTTGT 59.307 45.455 0.00 0.00 34.23 3.32
371 372 1.817740 CGGTGGTGGTGATCCTTGTTT 60.818 52.381 0.00 0.00 34.23 2.83
379 380 4.344865 GTGGGCGGTGGTGGTGAT 62.345 66.667 0.00 0.00 0.00 3.06
392 393 3.007635 GTTACTTGAATTCTCCGGTGGG 58.992 50.000 7.05 0.00 0.00 4.61
425 428 8.397957 ACTCCATCATCATCCTTATCTAGTAGT 58.602 37.037 0.00 0.00 0.00 2.73
426 429 8.821686 ACTCCATCATCATCCTTATCTAGTAG 57.178 38.462 0.00 0.00 0.00 2.57
428 431 9.030452 GTTACTCCATCATCATCCTTATCTAGT 57.970 37.037 0.00 0.00 0.00 2.57
429 432 9.029368 TGTTACTCCATCATCATCCTTATCTAG 57.971 37.037 0.00 0.00 0.00 2.43
432 435 8.316946 TGATGTTACTCCATCATCATCCTTATC 58.683 37.037 0.00 0.00 44.70 1.75
433 436 8.211030 TGATGTTACTCCATCATCATCCTTAT 57.789 34.615 0.00 0.00 44.70 1.73
434 437 7.616528 TGATGTTACTCCATCATCATCCTTA 57.383 36.000 0.00 0.00 44.70 2.69
435 438 6.505048 TGATGTTACTCCATCATCATCCTT 57.495 37.500 0.00 0.00 44.70 3.36
467 470 1.862147 CGTCAACGCTCGTACGGAG 60.862 63.158 16.52 12.33 46.06 4.63
544 547 5.106475 GCCATTTTCCACGTCACATTTAGTA 60.106 40.000 0.00 0.00 0.00 1.82
545 548 4.320935 GCCATTTTCCACGTCACATTTAGT 60.321 41.667 0.00 0.00 0.00 2.24
546 549 4.165779 GCCATTTTCCACGTCACATTTAG 58.834 43.478 0.00 0.00 0.00 1.85
591 594 1.587043 GAACTGAAAAGCGGCTCCCC 61.587 60.000 1.45 0.00 0.00 4.81
644 647 1.539388 CCAAGGTGCAAAAGCGTATCA 59.461 47.619 0.00 0.00 0.00 2.15
645 648 1.732405 GCCAAGGTGCAAAAGCGTATC 60.732 52.381 0.00 0.00 0.00 2.24
650 653 2.031012 GGGCCAAGGTGCAAAAGC 59.969 61.111 4.39 0.00 0.00 3.51
662 665 2.632602 TTTTGAACGCAGAGGGGCCA 62.633 55.000 4.39 0.00 0.00 5.36
780 787 4.051237 GGAAGTTGGAACAGCACAAAATC 58.949 43.478 0.00 0.00 43.86 2.17
790 797 2.951642 CAGCTTCTTGGAAGTTGGAACA 59.048 45.455 13.66 0.00 0.00 3.18
810 817 1.221635 CTCTCTCTCTCCCCCTCTCA 58.778 60.000 0.00 0.00 0.00 3.27
811 818 1.421646 CTCTCTCTCTCTCCCCCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
812 819 1.522900 CTCTCTCTCTCTCCCCCTCT 58.477 60.000 0.00 0.00 0.00 3.69
813 820 0.478507 CCTCTCTCTCTCTCCCCCTC 59.521 65.000 0.00 0.00 0.00 4.30
814 821 1.655114 GCCTCTCTCTCTCTCCCCCT 61.655 65.000 0.00 0.00 0.00 4.79
815 822 1.152546 GCCTCTCTCTCTCTCCCCC 60.153 68.421 0.00 0.00 0.00 5.40
816 823 0.261696 AAGCCTCTCTCTCTCTCCCC 59.738 60.000 0.00 0.00 0.00 4.81
817 824 1.064017 TCAAGCCTCTCTCTCTCTCCC 60.064 57.143 0.00 0.00 0.00 4.30
830 837 2.697751 ACATAGATCGAAGCTCAAGCCT 59.302 45.455 0.00 0.00 43.38 4.58
854 861 2.030007 CCTTTCAAAATTGCAGCTCCGA 60.030 45.455 0.00 0.00 0.00 4.55
861 868 5.596361 TCTTGTACTCCCTTTCAAAATTGCA 59.404 36.000 0.00 0.00 0.00 4.08
864 871 5.775195 CCCTCTTGTACTCCCTTTCAAAATT 59.225 40.000 0.00 0.00 0.00 1.82
869 876 2.266279 CCCCTCTTGTACTCCCTTTCA 58.734 52.381 0.00 0.00 0.00 2.69
991 1002 2.612493 CCCCCGTCATCCTGGGTTT 61.612 63.158 0.00 0.00 44.44 3.27
1215 1242 3.126225 GCGTCCTCGTCGTCCTCT 61.126 66.667 0.00 0.00 39.49 3.69
1457 1485 3.733443 ATTTGGGACAGTTTGCAGAAC 57.267 42.857 4.26 4.26 42.39 3.01
1529 1565 1.270305 TGCTCAAGACCGAGTTCCAAG 60.270 52.381 0.00 0.00 35.33 3.61
1571 1944 0.745845 CAGCAATTCTCAGACCCCCG 60.746 60.000 0.00 0.00 0.00 5.73
1612 1985 5.465724 GGAAGTACAGTTACTTGAACAGGTG 59.534 44.000 1.81 0.00 46.67 4.00
1721 2096 6.835819 AGTCTTGGTTTTATAAAGGAAGCC 57.164 37.500 0.00 0.00 0.00 4.35
1790 2165 6.882140 TCCTTATACGGCATTTTCAGAAAAGA 59.118 34.615 13.71 0.00 33.22 2.52
1860 2235 6.166984 TGAAGGGCAAATTTATGACAACAA 57.833 33.333 0.00 0.00 0.00 2.83
1884 2259 5.779529 AACTCCATGTGCATATTGAATCC 57.220 39.130 0.00 0.00 0.00 3.01
2074 2449 3.067106 CACGCCTTGTCTAGTGAATTGT 58.933 45.455 0.00 0.00 36.79 2.71
2084 2459 3.589988 CATCTTTAGTCACGCCTTGTCT 58.410 45.455 0.00 0.00 0.00 3.41
2085 2460 2.094417 GCATCTTTAGTCACGCCTTGTC 59.906 50.000 0.00 0.00 0.00 3.18
2090 2465 3.259064 TGTAAGCATCTTTAGTCACGCC 58.741 45.455 0.00 0.00 0.00 5.68
2119 2494 2.310233 CGAACACACTCGCACTGGG 61.310 63.158 0.00 0.00 31.04 4.45
2120 2495 2.310233 CCGAACACACTCGCACTGG 61.310 63.158 0.00 0.00 37.51 4.00
2145 2524 0.179105 TGCATTGCATTGATTCGGCC 60.179 50.000 7.38 0.00 31.71 6.13
2228 2607 2.124695 CCTTTAGCCCGCCCTGAC 60.125 66.667 0.00 0.00 0.00 3.51
2235 2614 1.207089 TGATGTCTGACCTTTAGCCCG 59.793 52.381 5.17 0.00 0.00 6.13
2281 2660 5.340803 CAAATTCATGCTGATTCAGACCTG 58.659 41.667 17.87 11.18 32.44 4.00
2304 2683 3.798202 AGATACAAAACCTCGGATGAGC 58.202 45.455 0.00 0.00 41.13 4.26
2774 3156 5.435291 CATTCATCTTGTTTAGCTCCTCCT 58.565 41.667 0.00 0.00 0.00 3.69
2775 3157 4.036144 GCATTCATCTTGTTTAGCTCCTCC 59.964 45.833 0.00 0.00 0.00 4.30
2776 3158 4.880696 AGCATTCATCTTGTTTAGCTCCTC 59.119 41.667 0.00 0.00 0.00 3.71
3276 3660 1.048601 AGAACACCTCTTCGGCTTCA 58.951 50.000 0.00 0.00 35.61 3.02
3436 3820 7.041508 TGCACATTCTTCTTCTTCTTCTTCTTC 60.042 37.037 0.00 0.00 0.00 2.87
3438 3822 6.294473 TGCACATTCTTCTTCTTCTTCTTCT 58.706 36.000 0.00 0.00 0.00 2.85
3439 3823 6.426328 TCTGCACATTCTTCTTCTTCTTCTTC 59.574 38.462 0.00 0.00 0.00 2.87
3440 3824 6.294473 TCTGCACATTCTTCTTCTTCTTCTT 58.706 36.000 0.00 0.00 0.00 2.52
3441 3825 5.862845 TCTGCACATTCTTCTTCTTCTTCT 58.137 37.500 0.00 0.00 0.00 2.85
3457 3841 8.043113 ACTCTATCATTTCAATAACTCTGCACA 58.957 33.333 0.00 0.00 0.00 4.57
3606 3992 4.413189 ACAGATATGAATGACCCACATGGA 59.587 41.667 0.00 0.00 39.39 3.41
3844 4231 6.494842 TGAAGTTGAACATGAAAGTAACTGC 58.505 36.000 0.00 2.31 0.00 4.40
3992 4379 5.246145 ACTCTAGAAGGCAACGTGTATAC 57.754 43.478 0.00 0.00 46.39 1.47
3999 4386 5.067413 TGAACCTATACTCTAGAAGGCAACG 59.933 44.000 7.94 0.00 46.39 4.10
4000 4387 6.097129 AGTGAACCTATACTCTAGAAGGCAAC 59.903 42.308 7.94 4.81 31.98 4.17
4001 4388 6.195700 AGTGAACCTATACTCTAGAAGGCAA 58.804 40.000 7.94 0.00 31.98 4.52
4002 4389 5.767670 AGTGAACCTATACTCTAGAAGGCA 58.232 41.667 7.94 0.00 31.98 4.75
4020 4407 8.500753 ACTACACACAGAACAAAATAAGTGAA 57.499 30.769 0.00 0.00 0.00 3.18
4022 4409 8.142994 AGACTACACACAGAACAAAATAAGTG 57.857 34.615 0.00 0.00 0.00 3.16
4023 4410 9.998106 ATAGACTACACACAGAACAAAATAAGT 57.002 29.630 0.00 0.00 0.00 2.24
4035 4428 7.500892 AGAGATTCCACTATAGACTACACACAG 59.499 40.741 6.78 0.00 0.00 3.66
4050 4443 9.440761 AATATAAGTCCTTGTAGAGATTCCACT 57.559 33.333 0.00 0.00 0.00 4.00
4386 4797 7.550196 CCAATATTCTTTGAAAGGGGAAACATG 59.450 37.037 4.94 0.00 0.00 3.21



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.