Multiple sequence alignment - TraesCS5A01G096600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G096600 chr5A 100.000 5625 0 0 1 5625 136392719 136398343 0.000000e+00 10388.0
1 TraesCS5A01G096600 chr5A 92.899 169 10 1 4055 4221 320214239 320214407 1.570000e-60 244.0
2 TraesCS5A01G096600 chr5A 97.727 44 1 0 1508 1551 136394183 136394226 6.040000e-10 76.8
3 TraesCS5A01G096600 chr5A 97.727 44 1 0 1465 1508 136394226 136394269 6.040000e-10 76.8
4 TraesCS5A01G096600 chr5D 93.642 3020 110 30 2042 5026 123457914 123460886 0.000000e+00 4438.0
5 TraesCS5A01G096600 chr5D 91.204 648 39 12 829 1468 123451738 123452375 0.000000e+00 865.0
6 TraesCS5A01G096600 chr5D 88.623 501 21 12 1550 2046 123452417 123452885 1.360000e-160 577.0
7 TraesCS5A01G096600 chr5D 96.774 217 7 0 1 217 123450026 123450242 4.140000e-96 363.0
8 TraesCS5A01G096600 chr5D 94.470 217 9 3 5407 5623 123460965 123461178 1.170000e-86 331.0
9 TraesCS5A01G096600 chr5D 95.238 168 7 1 285 451 42949560 42949727 1.200000e-66 265.0
10 TraesCS5A01G096600 chr5D 94.186 172 8 2 279 448 445106659 445106488 1.550000e-65 261.0
11 TraesCS5A01G096600 chr5D 95.000 80 4 0 5083 5162 123460887 123460966 5.920000e-25 126.0
12 TraesCS5A01G096600 chr5D 95.588 68 2 1 215 282 123450489 123450555 2.140000e-19 108.0
13 TraesCS5A01G096600 chr5B 95.628 2173 68 13 1508 3676 136411011 136413160 0.000000e+00 3461.0
14 TraesCS5A01G096600 chr5B 90.414 1450 62 29 3675 5064 136413224 136414656 0.000000e+00 1836.0
15 TraesCS5A01G096600 chr5B 95.552 607 22 4 906 1508 136410449 136411054 0.000000e+00 966.0
16 TraesCS5A01G096600 chr5B 88.636 220 11 6 5418 5623 136416897 136417116 7.230000e-64 255.0
17 TraesCS5A01G096600 chr5B 91.228 171 11 3 4060 4227 541684154 541683985 4.380000e-56 230.0
18 TraesCS5A01G096600 chr7D 87.032 401 44 8 449 849 418627544 418627152 4.000000e-121 446.0
19 TraesCS5A01G096600 chr7D 89.447 199 13 7 255 452 401145164 401145355 1.570000e-60 244.0
20 TraesCS5A01G096600 chr7D 93.694 111 3 3 894 1004 583594805 583594911 4.510000e-36 163.0
21 TraesCS5A01G096600 chr7D 95.098 102 3 2 894 995 634667227 634667326 5.830000e-35 159.0
22 TraesCS5A01G096600 chr4B 85.821 402 48 8 449 850 20300719 20300327 8.720000e-113 418.0
23 TraesCS5A01G096600 chr4B 90.688 247 23 0 5160 5406 568607656 568607410 4.200000e-86 329.0
24 TraesCS5A01G096600 chr7A 85.572 402 49 7 449 850 731748152 731748544 4.060000e-111 412.0
25 TraesCS5A01G096600 chr7A 90.361 249 23 1 5161 5408 513541065 513541313 5.430000e-85 326.0
26 TraesCS5A01G096600 chr7A 86.290 248 31 3 5161 5408 123270993 123271237 3.340000e-67 267.0
27 TraesCS5A01G096600 chr7A 94.444 108 4 2 893 1000 731240762 731240867 1.250000e-36 165.0
28 TraesCS5A01G096600 chr2D 84.826 402 50 6 447 848 617096762 617097152 1.470000e-105 394.0
29 TraesCS5A01G096600 chr2D 94.706 170 8 1 283 451 420278155 420278324 4.320000e-66 263.0
30 TraesCS5A01G096600 chr2D 91.848 184 10 4 268 449 180883370 180883190 9.360000e-63 252.0
31 TraesCS5A01G096600 chr2D 93.373 166 8 2 4059 4222 296364210 296364046 5.630000e-60 243.0
32 TraesCS5A01G096600 chr2A 85.994 357 41 6 447 800 747258639 747258989 1.910000e-99 374.0
33 TraesCS5A01G096600 chr2A 86.607 336 38 7 448 781 208582187 208581857 1.150000e-96 364.0
34 TraesCS5A01G096600 chr2A 96.407 167 5 1 284 449 389221006 389221172 2.000000e-69 274.0
35 TraesCS5A01G096600 chr2A 93.827 162 8 1 4060 4219 419206977 419206816 5.630000e-60 243.0
36 TraesCS5A01G096600 chr6A 90.800 250 20 2 5160 5409 134548792 134548546 1.170000e-86 331.0
37 TraesCS5A01G096600 chr6A 94.675 169 8 1 282 449 458217877 458217709 1.550000e-65 261.0
38 TraesCS5A01G096600 chr6A 93.220 177 11 1 274 449 613889950 613890126 5.590000e-65 259.0
39 TraesCS5A01G096600 chr6A 94.444 108 4 2 893 1000 146548616 146548511 1.250000e-36 165.0
40 TraesCS5A01G096600 chr1D 82.250 400 48 10 449 848 21910279 21909903 1.950000e-84 324.0
41 TraesCS5A01G096600 chr7B 90.000 250 22 3 5160 5408 84394335 84394088 2.530000e-83 320.0
42 TraesCS5A01G096600 chr7B 94.706 170 8 1 284 452 708478450 708478619 4.320000e-66 263.0
43 TraesCS5A01G096600 chr4A 86.505 289 33 6 449 737 101515936 101515654 4.230000e-81 313.0
44 TraesCS5A01G096600 chr4A 95.238 84 4 0 1309 1392 64156949 64157032 3.540000e-27 134.0
45 TraesCS5A01G096600 chr1A 84.127 315 44 6 453 765 582296775 582296465 3.290000e-77 300.0
46 TraesCS5A01G096600 chr1A 89.840 187 13 4 4048 4232 487486470 487486288 9.420000e-58 235.0
47 TraesCS5A01G096600 chr1A 95.238 105 3 2 898 1000 119739115 119739011 1.250000e-36 165.0
48 TraesCS5A01G096600 chr6B 87.402 254 27 5 5157 5408 290666141 290666391 2.560000e-73 287.0
49 TraesCS5A01G096600 chr6B 87.008 254 28 5 5157 5408 290605908 290606158 1.190000e-71 281.0
50 TraesCS5A01G096600 chr6B 86.220 254 30 5 5157 5408 290638302 290638552 2.580000e-68 270.0
51 TraesCS5A01G096600 chr3D 86.747 249 29 4 5161 5409 400274799 400274555 2.000000e-69 274.0
52 TraesCS5A01G096600 chr3D 92.571 175 9 3 4056 4228 87925996 87926168 1.210000e-61 248.0
53 TraesCS5A01G096600 chr3D 92.857 84 6 0 1309 1392 548211355 548211438 7.650000e-24 122.0
54 TraesCS5A01G096600 chr3D 91.566 83 7 0 1309 1391 548233500 548233582 1.280000e-21 115.0
55 TraesCS5A01G096600 chr3B 93.452 168 10 1 4052 4219 257781944 257782110 1.210000e-61 248.0
56 TraesCS5A01G096600 chr2B 93.865 163 7 2 4059 4219 366017518 366017679 5.630000e-60 243.0
57 TraesCS5A01G096600 chr1B 95.192 104 1 4 900 1001 172256319 172256218 1.620000e-35 161.0
58 TraesCS5A01G096600 chr1B 94.048 84 5 0 1309 1392 253067547 253067464 1.640000e-25 128.0
59 TraesCS5A01G096600 chr6D 96.774 93 1 2 913 1004 470603308 470603217 2.710000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G096600 chr5A 136392719 136398343 5624 False 10388.000000 10388 100.000000 1 5625 1 chr5A.!!$F1 5624
1 TraesCS5A01G096600 chr5D 123457914 123461178 3264 False 1631.666667 4438 94.370667 2042 5623 3 chr5D.!!$F3 3581
2 TraesCS5A01G096600 chr5D 123450026 123452885 2859 False 478.250000 865 93.047250 1 2046 4 chr5D.!!$F2 2045
3 TraesCS5A01G096600 chr5B 136410449 136417116 6667 False 1629.500000 3461 92.557500 906 5623 4 chr5B.!!$F1 4717

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
298 548 0.108281 GCAACTACTCCCTCGGTTCC 60.108 60.000 0.00 0.0 0.00 3.62 F
775 1063 0.322975 GGACACTGCCTCAGATGTGT 59.677 55.000 0.29 0.0 44.92 3.72 F
1217 2275 0.889306 CCTCCCTCGTTTCTTCGTCT 59.111 55.000 0.00 0.0 0.00 4.18 F
1583 2657 1.284657 CTTGCGTCCATCAGTGCTAG 58.715 55.000 0.00 0.0 0.00 3.42 F
2408 3486 1.448893 GTCGCACGGCCCAGATTTA 60.449 57.895 0.00 0.0 0.00 1.40 F
3881 5026 0.035439 CTAGAACCCCATGCCACGTT 60.035 55.000 0.00 0.0 0.00 3.99 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1194 2252 0.458716 GAAGAAACGAGGGAGGCGAG 60.459 60.000 0.00 0.00 0.00 5.03 R
1656 2731 0.536460 TTGTCAAGGAACCGGCCTTC 60.536 55.000 10.18 3.38 44.89 3.46 R
2677 3755 0.970427 TGATGCGACACCTGAGGCTA 60.970 55.000 0.00 0.00 0.00 3.93 R
3481 4559 1.541233 GCAGTCACAAGTGTACCAGCT 60.541 52.381 0.00 0.00 0.00 4.24 R
4098 5253 4.830600 TGCTCCGTATGTAGTCCATATTGA 59.169 41.667 0.00 0.00 38.29 2.57 R
5120 8459 0.388520 GAACAGCATTTTCCGGCCAC 60.389 55.000 2.24 0.00 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 2.509336 CCGTTCGCGATTGGAGCT 60.509 61.111 19.32 0.00 44.71 4.09
109 110 2.545946 GCTCCTTTATCAGATGTTCGGC 59.454 50.000 0.00 0.00 0.00 5.54
208 209 9.435688 ACCAAATCAAAAGAACATAAATAAGCC 57.564 29.630 0.00 0.00 0.00 4.35
285 535 8.621532 ACAAAGAGATAAGTTCATTGCAACTA 57.378 30.769 0.00 0.00 35.45 2.24
286 536 8.507249 ACAAAGAGATAAGTTCATTGCAACTAC 58.493 33.333 0.00 0.00 35.45 2.73
287 537 8.725148 CAAAGAGATAAGTTCATTGCAACTACT 58.275 33.333 0.00 2.44 35.45 2.57
288 538 8.485976 AAGAGATAAGTTCATTGCAACTACTC 57.514 34.615 0.00 5.74 35.45 2.59
289 539 7.044798 AGAGATAAGTTCATTGCAACTACTCC 58.955 38.462 0.00 0.00 35.45 3.85
290 540 6.116126 AGATAAGTTCATTGCAACTACTCCC 58.884 40.000 0.00 0.00 35.45 4.30
291 541 4.373156 AAGTTCATTGCAACTACTCCCT 57.627 40.909 0.00 0.00 35.45 4.20
292 542 3.944087 AGTTCATTGCAACTACTCCCTC 58.056 45.455 0.00 0.00 34.70 4.30
293 543 2.672961 TCATTGCAACTACTCCCTCG 57.327 50.000 0.00 0.00 0.00 4.63
294 544 1.207089 TCATTGCAACTACTCCCTCGG 59.793 52.381 0.00 0.00 0.00 4.63
295 545 1.066143 CATTGCAACTACTCCCTCGGT 60.066 52.381 0.00 0.00 0.00 4.69
296 546 1.053424 TTGCAACTACTCCCTCGGTT 58.947 50.000 0.00 0.00 0.00 4.44
297 547 0.606604 TGCAACTACTCCCTCGGTTC 59.393 55.000 0.00 0.00 0.00 3.62
298 548 0.108281 GCAACTACTCCCTCGGTTCC 60.108 60.000 0.00 0.00 0.00 3.62
299 549 1.558233 CAACTACTCCCTCGGTTCCT 58.442 55.000 0.00 0.00 0.00 3.36
300 550 2.731572 CAACTACTCCCTCGGTTCCTA 58.268 52.381 0.00 0.00 0.00 2.94
301 551 3.094572 CAACTACTCCCTCGGTTCCTAA 58.905 50.000 0.00 0.00 0.00 2.69
302 552 3.463048 ACTACTCCCTCGGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
303 553 3.991683 ACTACTCCCTCGGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
304 554 5.134725 ACTACTCCCTCGGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
305 555 5.713807 ACTACTCCCTCGGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
306 556 6.856757 ACTACTCCCTCGGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
307 557 7.300658 ACTACTCCCTCGGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
308 558 6.667558 ACTCCCTCGGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
309 559 6.141790 ACTCCCTCGGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
310 560 6.267242 ACTCCCTCGGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
311 561 6.379579 TCCCTCGGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
312 562 6.842807 TCCCTCGGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
313 563 7.346436 TCCCTCGGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
314 564 7.991460 CCCTCGGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
315 565 9.392259 CCTCGGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
343 593 8.909708 ACATTTCAAATGGAATACAACATACG 57.090 30.769 14.70 0.00 34.91 3.06
344 594 7.973388 ACATTTCAAATGGAATACAACATACGG 59.027 33.333 14.70 0.00 34.91 4.02
345 595 7.689446 TTTCAAATGGAATACAACATACGGA 57.311 32.000 0.00 0.00 34.91 4.69
346 596 7.873719 TTCAAATGGAATACAACATACGGAT 57.126 32.000 0.00 0.00 0.00 4.18
347 597 7.258022 TCAAATGGAATACAACATACGGATG 57.742 36.000 5.94 5.94 39.16 3.51
349 599 7.988028 TCAAATGGAATACAACATACGGATGTA 59.012 33.333 15.10 0.00 45.93 2.29
350 600 8.783093 CAAATGGAATACAACATACGGATGTAT 58.217 33.333 15.10 8.21 45.93 2.29
390 640 7.516198 AGTGTAGATTCACTCATTTTGCTTT 57.484 32.000 0.00 0.00 44.07 3.51
391 641 7.365741 AGTGTAGATTCACTCATTTTGCTTTG 58.634 34.615 0.00 0.00 44.07 2.77
392 642 7.013655 AGTGTAGATTCACTCATTTTGCTTTGT 59.986 33.333 0.00 0.00 44.07 2.83
393 643 8.289618 GTGTAGATTCACTCATTTTGCTTTGTA 58.710 33.333 0.00 0.00 35.68 2.41
394 644 9.013229 TGTAGATTCACTCATTTTGCTTTGTAT 57.987 29.630 0.00 0.00 0.00 2.29
395 645 9.282247 GTAGATTCACTCATTTTGCTTTGTATG 57.718 33.333 0.00 0.00 0.00 2.39
396 646 7.889469 AGATTCACTCATTTTGCTTTGTATGT 58.111 30.769 0.00 0.00 0.00 2.29
397 647 9.013229 AGATTCACTCATTTTGCTTTGTATGTA 57.987 29.630 0.00 0.00 0.00 2.29
398 648 9.624697 GATTCACTCATTTTGCTTTGTATGTAA 57.375 29.630 0.00 0.00 0.00 2.41
400 650 9.624697 TTCACTCATTTTGCTTTGTATGTAATC 57.375 29.630 0.00 0.00 0.00 1.75
401 651 8.791675 TCACTCATTTTGCTTTGTATGTAATCA 58.208 29.630 0.00 0.00 0.00 2.57
402 652 8.853345 CACTCATTTTGCTTTGTATGTAATCAC 58.147 33.333 0.00 0.00 0.00 3.06
403 653 8.796475 ACTCATTTTGCTTTGTATGTAATCACT 58.204 29.630 0.00 0.00 0.00 3.41
404 654 9.630098 CTCATTTTGCTTTGTATGTAATCACTT 57.370 29.630 0.00 0.00 0.00 3.16
405 655 9.409312 TCATTTTGCTTTGTATGTAATCACTTG 57.591 29.630 0.00 0.00 0.00 3.16
406 656 9.195411 CATTTTGCTTTGTATGTAATCACTTGT 57.805 29.630 0.00 0.00 0.00 3.16
407 657 9.762933 ATTTTGCTTTGTATGTAATCACTTGTT 57.237 25.926 0.00 0.00 0.00 2.83
408 658 8.572828 TTTGCTTTGTATGTAATCACTTGTTG 57.427 30.769 0.00 0.00 0.00 3.33
409 659 6.676950 TGCTTTGTATGTAATCACTTGTTGG 58.323 36.000 0.00 0.00 0.00 3.77
410 660 6.488344 TGCTTTGTATGTAATCACTTGTTGGA 59.512 34.615 0.00 0.00 0.00 3.53
411 661 7.013750 TGCTTTGTATGTAATCACTTGTTGGAA 59.986 33.333 0.00 0.00 0.00 3.53
412 662 8.028938 GCTTTGTATGTAATCACTTGTTGGAAT 58.971 33.333 0.00 0.00 0.00 3.01
413 663 9.559958 CTTTGTATGTAATCACTTGTTGGAATC 57.440 33.333 0.00 0.00 0.00 2.52
414 664 8.862325 TTGTATGTAATCACTTGTTGGAATCT 57.138 30.769 0.00 0.00 0.00 2.40
415 665 8.492673 TGTATGTAATCACTTGTTGGAATCTC 57.507 34.615 0.00 0.00 0.00 2.75
416 666 8.321353 TGTATGTAATCACTTGTTGGAATCTCT 58.679 33.333 0.00 0.00 0.00 3.10
417 667 9.817809 GTATGTAATCACTTGTTGGAATCTCTA 57.182 33.333 0.00 0.00 0.00 2.43
419 669 9.739276 ATGTAATCACTTGTTGGAATCTCTAAA 57.261 29.630 0.00 0.00 0.00 1.85
420 670 9.567776 TGTAATCACTTGTTGGAATCTCTAAAA 57.432 29.630 0.00 0.00 0.00 1.52
423 673 8.924511 ATCACTTGTTGGAATCTCTAAAAAGA 57.075 30.769 9.03 0.00 35.06 2.52
424 674 8.154649 TCACTTGTTGGAATCTCTAAAAAGAC 57.845 34.615 9.03 0.00 35.06 3.01
425 675 7.993183 TCACTTGTTGGAATCTCTAAAAAGACT 59.007 33.333 9.03 0.00 35.06 3.24
426 676 9.273016 CACTTGTTGGAATCTCTAAAAAGACTA 57.727 33.333 9.03 0.00 35.06 2.59
442 692 8.959705 AAAAAGACTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
443 693 7.909485 AAAGACTATATTTAGGAACGGAGGA 57.091 36.000 0.00 0.00 0.00 3.71
444 694 7.909485 AAGACTATATTTAGGAACGGAGGAA 57.091 36.000 0.00 0.00 0.00 3.36
445 695 7.527568 AGACTATATTTAGGAACGGAGGAAG 57.472 40.000 0.00 0.00 0.00 3.46
446 696 7.068061 AGACTATATTTAGGAACGGAGGAAGT 58.932 38.462 0.00 0.00 0.00 3.01
447 697 8.223330 AGACTATATTTAGGAACGGAGGAAGTA 58.777 37.037 0.00 0.00 0.00 2.24
479 729 6.889301 AAGATTGATCTTTGCTTTGACTCA 57.111 33.333 0.44 0.00 44.28 3.41
489 739 0.443869 CTTTGACTCATTCACGGCGG 59.556 55.000 13.24 0.00 32.26 6.13
511 761 0.823356 GCAGTTGCAGGGAGGTTTGA 60.823 55.000 0.00 0.00 41.59 2.69
526 776 4.647424 GGTTTGAAATGAACCTGACACA 57.353 40.909 0.00 0.00 42.58 3.72
533 783 6.061441 TGAAATGAACCTGACACATACAGTT 58.939 36.000 0.00 0.00 34.04 3.16
539 789 2.426522 CTGACACATACAGTTGGGTGG 58.573 52.381 0.00 0.00 32.06 4.61
547 797 5.533154 CACATACAGTTGGGTGGAGTAAAAA 59.467 40.000 0.00 0.00 0.00 1.94
548 798 6.208599 CACATACAGTTGGGTGGAGTAAAAAT 59.791 38.462 0.00 0.00 0.00 1.82
550 800 3.895041 ACAGTTGGGTGGAGTAAAAATGG 59.105 43.478 0.00 0.00 0.00 3.16
551 801 4.148838 CAGTTGGGTGGAGTAAAAATGGA 58.851 43.478 0.00 0.00 0.00 3.41
553 803 4.105697 AGTTGGGTGGAGTAAAAATGGAGA 59.894 41.667 0.00 0.00 0.00 3.71
554 804 4.946160 TGGGTGGAGTAAAAATGGAGAT 57.054 40.909 0.00 0.00 0.00 2.75
555 805 4.855340 TGGGTGGAGTAAAAATGGAGATC 58.145 43.478 0.00 0.00 0.00 2.75
557 807 5.222233 TGGGTGGAGTAAAAATGGAGATCAA 60.222 40.000 0.00 0.00 0.00 2.57
558 808 5.893824 GGGTGGAGTAAAAATGGAGATCAAT 59.106 40.000 0.00 0.00 0.00 2.57
587 837 1.529244 GTGGAGGTTGTTGCTGCCT 60.529 57.895 0.00 0.00 34.93 4.75
594 844 1.810151 GGTTGTTGCTGCCTTAATCGA 59.190 47.619 0.00 0.00 0.00 3.59
601 851 3.202906 TGCTGCCTTAATCGATGGTTAC 58.797 45.455 0.00 0.00 0.00 2.50
603 853 3.495001 GCTGCCTTAATCGATGGTTACTC 59.505 47.826 0.00 0.00 0.00 2.59
611 861 7.764443 CCTTAATCGATGGTTACTCTTCTTCAA 59.236 37.037 0.00 0.00 0.00 2.69
640 890 9.265901 GCTTCTGCTATCTTTGATGACTATTAA 57.734 33.333 0.00 0.00 36.03 1.40
667 917 8.942338 TTAATATCGCTTGACTTTACTCATGT 57.058 30.769 0.00 0.00 0.00 3.21
674 924 6.699204 CGCTTGACTTTACTCATGTCATCTAT 59.301 38.462 0.00 0.00 38.88 1.98
722 1010 3.636679 AGTAGCTCATGAACTGGCTAGA 58.363 45.455 13.12 0.00 35.59 2.43
766 1054 5.380043 CAAATATATGGAAGGACACTGCCT 58.620 41.667 0.00 0.00 43.63 4.75
767 1055 4.899352 ATATATGGAAGGACACTGCCTC 57.101 45.455 0.00 0.00 43.63 4.70
768 1056 1.951209 TATGGAAGGACACTGCCTCA 58.049 50.000 0.00 0.00 43.63 3.86
769 1057 0.617413 ATGGAAGGACACTGCCTCAG 59.383 55.000 0.00 0.00 43.63 3.35
775 1063 0.322975 GGACACTGCCTCAGATGTGT 59.677 55.000 0.29 0.00 44.92 3.72
790 1078 8.834465 CCTCAGATGTGTTTATTCCTCTTATTG 58.166 37.037 0.00 0.00 0.00 1.90
800 1088 5.931441 ATTCCTCTTATTGTAAGCGATGC 57.069 39.130 0.00 0.00 0.00 3.91
812 1100 2.708386 AGCGATGCTACGATCCTTAC 57.292 50.000 7.23 0.00 36.99 2.34
813 1101 1.954382 AGCGATGCTACGATCCTTACA 59.046 47.619 7.23 0.00 36.99 2.41
1006 2061 4.178540 CAAATGCCCTTTGTTGATGCTAG 58.821 43.478 1.68 0.00 39.55 3.42
1013 2068 4.159135 CCCTTTGTTGATGCTAGCAGAAAT 59.841 41.667 23.89 5.82 0.00 2.17
1028 2083 7.440556 GCTAGCAGAAATGAATCTTCTACATCA 59.559 37.037 10.63 0.00 31.84 3.07
1032 2087 9.875675 GCAGAAATGAATCTTCTACATCATTAC 57.124 33.333 0.00 0.00 40.58 1.89
1076 2131 1.338107 TGTCGTCCTGTGGTGATTCT 58.662 50.000 0.00 0.00 0.00 2.40
1091 2146 3.487574 GTGATTCTGGCGATAGTTCTTCG 59.512 47.826 0.00 0.00 39.55 3.79
1174 2229 3.253432 GTCCCGAGCTCAAATCTTGTTTT 59.747 43.478 15.40 0.00 0.00 2.43
1194 2252 1.895707 CCCCATCTGCTTGATCGCC 60.896 63.158 0.00 0.00 32.05 5.54
1198 2256 1.593750 ATCTGCTTGATCGCCTCGC 60.594 57.895 0.00 0.00 0.00 5.03
1212 2270 1.592223 CTCGCCTCCCTCGTTTCTT 59.408 57.895 0.00 0.00 0.00 2.52
1217 2275 0.889306 CCTCCCTCGTTTCTTCGTCT 59.111 55.000 0.00 0.00 0.00 4.18
1227 2285 2.829577 TTCTTCGTCTCGCGCGACTC 62.830 60.000 31.40 22.29 41.07 3.36
1258 2316 4.207281 CGGCGCGGAGAGGAATGA 62.207 66.667 9.72 0.00 0.00 2.57
1483 2542 2.571653 AGTACCATGTTCTAGCCTTGCA 59.428 45.455 0.00 0.00 0.00 4.08
1484 2543 2.119801 ACCATGTTCTAGCCTTGCAG 57.880 50.000 0.00 0.00 0.00 4.41
1485 2544 1.352352 ACCATGTTCTAGCCTTGCAGT 59.648 47.619 0.00 0.00 0.00 4.40
1486 2545 2.571653 ACCATGTTCTAGCCTTGCAGTA 59.428 45.455 0.00 0.00 0.00 2.74
1487 2546 3.009033 ACCATGTTCTAGCCTTGCAGTAA 59.991 43.478 0.00 0.00 0.00 2.24
1488 2547 4.202441 CCATGTTCTAGCCTTGCAGTAAT 58.798 43.478 0.00 0.00 0.00 1.89
1489 2548 4.274459 CCATGTTCTAGCCTTGCAGTAATC 59.726 45.833 0.00 0.00 0.00 1.75
1490 2549 4.826274 TGTTCTAGCCTTGCAGTAATCT 57.174 40.909 0.00 0.00 0.00 2.40
1491 2550 4.507710 TGTTCTAGCCTTGCAGTAATCTG 58.492 43.478 0.00 0.00 43.87 2.90
1492 2551 4.020218 TGTTCTAGCCTTGCAGTAATCTGT 60.020 41.667 0.00 0.00 43.05 3.41
1493 2552 4.392921 TCTAGCCTTGCAGTAATCTGTC 57.607 45.455 0.00 0.00 43.05 3.51
1494 2553 3.769300 TCTAGCCTTGCAGTAATCTGTCA 59.231 43.478 0.00 0.00 43.05 3.58
1495 2554 3.641434 AGCCTTGCAGTAATCTGTCAT 57.359 42.857 0.00 0.00 43.05 3.06
1496 2555 4.760530 AGCCTTGCAGTAATCTGTCATA 57.239 40.909 0.00 0.00 43.05 2.15
1497 2556 4.701765 AGCCTTGCAGTAATCTGTCATAG 58.298 43.478 0.00 0.00 43.05 2.23
1498 2557 4.163078 AGCCTTGCAGTAATCTGTCATAGT 59.837 41.667 0.00 0.00 43.05 2.12
1499 2558 4.878397 GCCTTGCAGTAATCTGTCATAGTT 59.122 41.667 0.00 0.00 43.05 2.24
1500 2559 5.007136 GCCTTGCAGTAATCTGTCATAGTTC 59.993 44.000 0.00 0.00 43.05 3.01
1501 2560 6.108687 CCTTGCAGTAATCTGTCATAGTTCA 58.891 40.000 0.00 0.00 43.05 3.18
1502 2561 6.257411 CCTTGCAGTAATCTGTCATAGTTCAG 59.743 42.308 0.00 0.00 43.05 3.02
1503 2562 5.664457 TGCAGTAATCTGTCATAGTTCAGG 58.336 41.667 0.00 0.00 43.05 3.86
1504 2563 5.053145 GCAGTAATCTGTCATAGTTCAGGG 58.947 45.833 0.00 0.00 43.05 4.45
1505 2564 5.053145 CAGTAATCTGTCATAGTTCAGGGC 58.947 45.833 0.00 0.00 36.97 5.19
1506 2565 4.965532 AGTAATCTGTCATAGTTCAGGGCT 59.034 41.667 0.00 0.00 33.13 5.19
1507 2566 4.851639 AATCTGTCATAGTTCAGGGCTT 57.148 40.909 0.00 0.00 33.13 4.35
1508 2567 5.957771 AATCTGTCATAGTTCAGGGCTTA 57.042 39.130 0.00 0.00 33.13 3.09
1509 2568 4.737855 TCTGTCATAGTTCAGGGCTTAC 57.262 45.455 0.00 0.00 33.13 2.34
1510 2569 3.451178 TCTGTCATAGTTCAGGGCTTACC 59.549 47.826 0.00 0.00 40.67 2.85
1511 2570 3.178046 TGTCATAGTTCAGGGCTTACCA 58.822 45.455 0.00 0.00 43.89 3.25
1512 2571 3.780294 TGTCATAGTTCAGGGCTTACCAT 59.220 43.478 0.00 0.00 43.89 3.55
1520 2579 2.565841 CAGGGCTTACCATGTTCTAGC 58.434 52.381 0.00 0.00 42.93 3.42
1523 2582 3.283259 GGCTTACCATGTTCTAGCCTT 57.717 47.619 14.60 0.00 46.14 4.35
1524 2583 2.945668 GGCTTACCATGTTCTAGCCTTG 59.054 50.000 14.60 0.00 46.14 3.61
1525 2584 2.356069 GCTTACCATGTTCTAGCCTTGC 59.644 50.000 0.00 0.00 0.00 4.01
1526 2585 3.609853 CTTACCATGTTCTAGCCTTGCA 58.390 45.455 0.00 0.00 0.00 4.08
1579 2653 3.067106 AGTTTACTTGCGTCCATCAGTG 58.933 45.455 0.00 0.00 0.00 3.66
1583 2657 1.284657 CTTGCGTCCATCAGTGCTAG 58.715 55.000 0.00 0.00 0.00 3.42
1629 2704 1.480954 ACAGATTCTACCGTTCGCCAT 59.519 47.619 0.00 0.00 0.00 4.40
1656 2731 4.569943 TCTTCAAAGGAAAGGAGATGACG 58.430 43.478 0.00 0.00 31.35 4.35
1699 2774 3.167485 TGAAAGGATGAGGCAAAATGCT 58.833 40.909 2.00 0.00 44.28 3.79
1750 2825 1.673920 CGAGAGAGTAGGCTTCTGTCC 59.326 57.143 13.51 5.89 0.00 4.02
1791 2866 1.800805 CAGTGTCGAGATGCACCTTT 58.199 50.000 0.00 0.00 36.35 3.11
1885 2960 6.170506 AGCACATCTGATTTTGCAATGAATT 58.829 32.000 18.47 0.00 37.44 2.17
1938 3013 8.548877 TGTTTAAGTAGATAGAAGCTTGGGATT 58.451 33.333 2.10 0.00 0.00 3.01
2095 3172 2.981784 TGGGAATATCTGTCCTCATGGG 59.018 50.000 0.00 0.00 35.33 4.00
2337 3415 4.021192 CAGCAAACAAAAGGGGACATATGT 60.021 41.667 8.43 8.43 0.00 2.29
2377 3455 9.533253 GCAAATTAAACATATATTGGCTTGACT 57.467 29.630 0.00 0.00 0.00 3.41
2396 3474 3.922910 ACTAAAACTAAGGAGGTCGCAC 58.077 45.455 0.00 0.00 0.00 5.34
2399 3477 2.202756 CTAAGGAGGTCGCACGGC 60.203 66.667 0.00 0.00 0.00 5.68
2408 3486 1.448893 GTCGCACGGCCCAGATTTA 60.449 57.895 0.00 0.00 0.00 1.40
2459 3537 4.796038 AGCACCTGGATTGAAAATTGAG 57.204 40.909 0.00 0.00 0.00 3.02
2460 3538 4.154942 AGCACCTGGATTGAAAATTGAGT 58.845 39.130 0.00 0.00 0.00 3.41
2461 3539 4.219288 AGCACCTGGATTGAAAATTGAGTC 59.781 41.667 0.00 0.00 0.00 3.36
2462 3540 4.022068 GCACCTGGATTGAAAATTGAGTCA 60.022 41.667 0.00 0.00 0.00 3.41
2463 3541 5.337009 GCACCTGGATTGAAAATTGAGTCAT 60.337 40.000 0.00 0.00 0.00 3.06
2464 3542 6.097356 CACCTGGATTGAAAATTGAGTCATG 58.903 40.000 0.00 0.00 0.00 3.07
2465 3543 5.107133 CCTGGATTGAAAATTGAGTCATGC 58.893 41.667 0.00 0.00 0.00 4.06
2466 3544 5.105473 CCTGGATTGAAAATTGAGTCATGCT 60.105 40.000 0.00 0.00 0.00 3.79
2467 3545 6.349243 TGGATTGAAAATTGAGTCATGCTT 57.651 33.333 0.00 0.00 0.00 3.91
2468 3546 6.392354 TGGATTGAAAATTGAGTCATGCTTC 58.608 36.000 0.00 0.00 0.00 3.86
2469 3547 6.209986 TGGATTGAAAATTGAGTCATGCTTCT 59.790 34.615 0.00 0.00 0.00 2.85
2470 3548 6.530534 GGATTGAAAATTGAGTCATGCTTCTG 59.469 38.462 0.00 0.00 0.00 3.02
2471 3549 6.638096 TTGAAAATTGAGTCATGCTTCTGA 57.362 33.333 0.00 0.00 0.00 3.27
2472 3550 6.005583 TGAAAATTGAGTCATGCTTCTGAC 57.994 37.500 0.00 6.55 44.78 3.51
2494 3572 9.599322 CTGACTTGATAACAGTGAATTGTTTAC 57.401 33.333 0.00 0.00 41.31 2.01
2543 3621 5.950883 GTAAAAGGATGGCCACTCTTTTAC 58.049 41.667 37.08 37.08 46.16 2.01
2677 3755 6.152831 GGAAACTTAGTTGGAATGGTAAGCAT 59.847 38.462 0.00 0.00 0.00 3.79
2968 4046 3.568538 CCTAGCAACTGCATTGACAAAC 58.431 45.455 4.22 0.00 45.16 2.93
2995 4073 6.312180 CGATGGAGGTTTTAAAGGTACAGTAC 59.688 42.308 1.59 1.59 0.00 2.73
3068 4146 2.090775 TGGGCACATCCTATAGGTGAGA 60.091 50.000 18.51 0.00 42.55 3.27
3109 4187 6.595716 AGCAGAATTAGTACAATTGGAGTGAC 59.404 38.462 8.37 0.00 0.00 3.67
3293 4371 8.941977 TGAAATTGTCGCATGTACTACTAATTT 58.058 29.630 0.00 0.00 0.00 1.82
3322 4400 9.546428 CCACCACTGAATTTTCTTCTTTATTTT 57.454 29.630 0.00 0.00 0.00 1.82
3427 4505 8.537728 TTTGATGCCTATACTTGGATGAAATT 57.462 30.769 0.00 0.00 0.00 1.82
3481 4559 1.742880 GAGCTGCATCGCTGGAACA 60.743 57.895 5.01 0.00 41.08 3.18
3611 4689 5.256474 ACCAGGTGTTAATCTTCATCCTTG 58.744 41.667 0.00 0.00 0.00 3.61
3642 4720 5.493133 TTTGTATTTTGAAGTGTGCGTCT 57.507 34.783 0.00 0.00 0.00 4.18
3706 4849 3.942748 AGTCGCTTAACACAGAACCAAAA 59.057 39.130 0.00 0.00 0.00 2.44
3711 4854 4.990426 GCTTAACACAGAACCAAAATGCAT 59.010 37.500 0.00 0.00 0.00 3.96
3878 5023 2.507407 TTTCTAGAACCCCATGCCAC 57.493 50.000 4.18 0.00 0.00 5.01
3881 5026 0.035439 CTAGAACCCCATGCCACGTT 60.035 55.000 0.00 0.00 0.00 3.99
3895 5040 6.910433 CCATGCCACGTTTATAGTTTATGTTC 59.090 38.462 0.00 0.00 0.00 3.18
4020 5166 2.632996 TGTCCTGACAGAGGGTGTAAAG 59.367 50.000 3.32 0.00 43.06 1.85
4042 5188 6.051179 AGTCACTTTATAAAGGGTGAGGAC 57.949 41.667 23.55 19.12 40.33 3.85
4043 5189 5.785940 AGTCACTTTATAAAGGGTGAGGACT 59.214 40.000 23.55 20.50 40.33 3.85
4044 5190 6.070710 AGTCACTTTATAAAGGGTGAGGACTC 60.071 42.308 23.55 10.60 40.33 3.36
4045 5191 5.189145 TCACTTTATAAAGGGTGAGGACTCC 59.811 44.000 23.55 0.00 40.33 3.85
4046 5192 4.161754 ACTTTATAAAGGGTGAGGACTCCG 59.838 45.833 25.25 0.89 40.31 4.63
4047 5193 2.249309 ATAAAGGGTGAGGACTCCGT 57.751 50.000 0.00 0.00 0.00 4.69
4128 5283 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
4161 5326 8.011844 ACACTCTAAAGCATGTCTATACATCA 57.988 34.615 0.00 0.00 44.70 3.07
4165 5330 9.619316 CTCTAAAGCATGTCTATACATCAGTAC 57.381 37.037 0.00 0.00 44.70 2.73
4360 5525 8.535690 AACAGCAACTAGTTAAAGATCAGTAC 57.464 34.615 8.04 0.00 0.00 2.73
4465 5631 7.386299 GCTACTACAGATTGAATCGATCCATTT 59.614 37.037 6.85 0.00 0.00 2.32
4499 5666 1.423584 TGAGCCTCTTCCACTGTGAA 58.576 50.000 9.86 1.21 0.00 3.18
4632 5799 4.459390 TGTCTGCTATTTAGTACCGCAA 57.541 40.909 0.00 0.00 0.00 4.85
4685 5857 7.615582 TTGTCTAGTTGGAGAGCATATTTTG 57.384 36.000 0.00 0.00 0.00 2.44
4713 5885 6.404623 CCACTCATTTATCGGCATTTCTTTCA 60.405 38.462 0.00 0.00 0.00 2.69
4755 5947 8.783093 TGTCAGAATTGTAGTACTGATTTTTGG 58.217 33.333 5.39 0.00 40.61 3.28
4760 5952 7.703058 ATTGTAGTACTGATTTTTGGAAGGG 57.297 36.000 5.39 0.00 0.00 3.95
4801 5993 4.912586 TGCTTTAATGGTTAGCCTGTACA 58.087 39.130 0.00 0.00 34.03 2.90
4802 5994 4.941263 TGCTTTAATGGTTAGCCTGTACAG 59.059 41.667 16.34 16.34 34.03 2.74
4803 5995 5.183228 GCTTTAATGGTTAGCCTGTACAGA 58.817 41.667 24.68 1.01 35.27 3.41
4804 5996 5.646360 GCTTTAATGGTTAGCCTGTACAGAA 59.354 40.000 24.68 7.92 35.27 3.02
4806 5998 7.497909 GCTTTAATGGTTAGCCTGTACAGAATA 59.502 37.037 24.68 12.94 35.27 1.75
4807 5999 9.391006 CTTTAATGGTTAGCCTGTACAGAATAA 57.609 33.333 24.68 17.68 35.27 1.40
4808 6000 9.914834 TTTAATGGTTAGCCTGTACAGAATAAT 57.085 29.630 24.68 9.46 35.27 1.28
4809 6001 7.807977 AATGGTTAGCCTGTACAGAATAATG 57.192 36.000 24.68 7.30 35.27 1.90
4810 6002 5.680619 TGGTTAGCCTGTACAGAATAATGG 58.319 41.667 24.68 7.57 35.27 3.16
4811 6003 5.190925 TGGTTAGCCTGTACAGAATAATGGT 59.809 40.000 24.68 13.54 35.27 3.55
4812 6004 6.120220 GGTTAGCCTGTACAGAATAATGGTT 58.880 40.000 24.68 7.03 0.00 3.67
4813 6005 7.092802 TGGTTAGCCTGTACAGAATAATGGTTA 60.093 37.037 24.68 6.02 35.27 2.85
4814 6006 7.441458 GGTTAGCCTGTACAGAATAATGGTTAG 59.559 40.741 24.68 3.83 0.00 2.34
4815 6007 5.368989 AGCCTGTACAGAATAATGGTTAGC 58.631 41.667 24.68 13.45 0.00 3.09
4816 6008 4.515567 GCCTGTACAGAATAATGGTTAGCC 59.484 45.833 24.68 0.00 0.00 3.93
4817 6009 5.687706 GCCTGTACAGAATAATGGTTAGCCT 60.688 44.000 24.68 0.00 35.27 4.58
4818 6010 5.760253 CCTGTACAGAATAATGGTTAGCCTG 59.240 44.000 24.68 0.00 35.27 4.85
4848 6042 5.928976 TCAGATTTTCTCTTCAGGTCACAA 58.071 37.500 0.00 0.00 29.16 3.33
4849 6043 6.356556 TCAGATTTTCTCTTCAGGTCACAAA 58.643 36.000 0.00 0.00 29.16 2.83
4852 6046 6.830838 AGATTTTCTCTTCAGGTCACAAAGTT 59.169 34.615 0.00 0.00 0.00 2.66
4858 6052 1.134521 TCAGGTCACAAAGTTGCGAGT 60.135 47.619 0.00 0.00 0.00 4.18
5009 6214 1.155889 TACTGCCAAACTGCATGACG 58.844 50.000 0.00 0.00 41.16 4.35
5018 6223 0.670546 ACTGCATGACGGTACACAGC 60.671 55.000 0.00 0.00 35.54 4.40
5058 6263 3.806521 CAGCTCCACCATCTCGAAAATAG 59.193 47.826 0.00 0.00 0.00 1.73
5072 8410 8.007405 TCTCGAAAATAGAACTGATGTATCCA 57.993 34.615 0.00 0.00 0.00 3.41
5120 8459 9.014297 ACAATGTACCAAGGAAGAAAAGATAAG 57.986 33.333 0.00 0.00 0.00 1.73
5124 8463 4.767409 ACCAAGGAAGAAAAGATAAGTGGC 59.233 41.667 0.00 0.00 0.00 5.01
5125 8464 4.158579 CCAAGGAAGAAAAGATAAGTGGCC 59.841 45.833 0.00 0.00 0.00 5.36
5162 8501 3.071479 TCAAGTTCGGTCTGCCAAATAC 58.929 45.455 0.00 0.00 34.09 1.89
5163 8502 3.074412 CAAGTTCGGTCTGCCAAATACT 58.926 45.455 0.00 0.00 34.09 2.12
5164 8503 2.973945 AGTTCGGTCTGCCAAATACTC 58.026 47.619 0.00 0.00 34.09 2.59
5165 8504 2.007608 GTTCGGTCTGCCAAATACTCC 58.992 52.381 0.00 0.00 34.09 3.85
5166 8505 1.271856 TCGGTCTGCCAAATACTCCA 58.728 50.000 0.00 0.00 34.09 3.86
5168 8507 2.158957 TCGGTCTGCCAAATACTCCATC 60.159 50.000 0.00 0.00 34.09 3.51
5169 8508 2.576615 GGTCTGCCAAATACTCCATCC 58.423 52.381 0.00 0.00 34.09 3.51
5170 8509 2.213499 GTCTGCCAAATACTCCATCCG 58.787 52.381 0.00 0.00 0.00 4.18
5171 8510 1.837439 TCTGCCAAATACTCCATCCGT 59.163 47.619 0.00 0.00 0.00 4.69
5172 8511 2.238646 TCTGCCAAATACTCCATCCGTT 59.761 45.455 0.00 0.00 0.00 4.44
5173 8512 2.614057 CTGCCAAATACTCCATCCGTTC 59.386 50.000 0.00 0.00 0.00 3.95
5174 8513 1.947456 GCCAAATACTCCATCCGTTCC 59.053 52.381 0.00 0.00 0.00 3.62
5175 8514 2.421529 GCCAAATACTCCATCCGTTCCT 60.422 50.000 0.00 0.00 0.00 3.36
5176 8515 3.181458 GCCAAATACTCCATCCGTTCCTA 60.181 47.826 0.00 0.00 0.00 2.94
5177 8516 4.685030 GCCAAATACTCCATCCGTTCCTAA 60.685 45.833 0.00 0.00 0.00 2.69
5178 8517 5.433526 CCAAATACTCCATCCGTTCCTAAA 58.566 41.667 0.00 0.00 0.00 1.85
5179 8518 6.062095 CCAAATACTCCATCCGTTCCTAAAT 58.938 40.000 0.00 0.00 0.00 1.40
5180 8519 7.221450 CCAAATACTCCATCCGTTCCTAAATA 58.779 38.462 0.00 0.00 0.00 1.40
5181 8520 7.883311 CCAAATACTCCATCCGTTCCTAAATAT 59.117 37.037 0.00 0.00 0.00 1.28
5182 8521 9.284968 CAAATACTCCATCCGTTCCTAAATATT 57.715 33.333 0.00 0.00 0.00 1.28
5183 8522 9.862149 AAATACTCCATCCGTTCCTAAATATTT 57.138 29.630 5.89 5.89 0.00 1.40
5184 8523 8.848474 ATACTCCATCCGTTCCTAAATATTTG 57.152 34.615 11.05 1.40 0.00 2.32
5185 8524 6.659824 ACTCCATCCGTTCCTAAATATTTGT 58.340 36.000 11.05 0.00 0.00 2.83
5186 8525 6.766467 ACTCCATCCGTTCCTAAATATTTGTC 59.234 38.462 11.05 0.00 0.00 3.18
5187 8526 6.895782 TCCATCCGTTCCTAAATATTTGTCT 58.104 36.000 11.05 0.00 0.00 3.41
5188 8527 7.343357 TCCATCCGTTCCTAAATATTTGTCTT 58.657 34.615 11.05 0.00 0.00 3.01
5189 8528 7.832187 TCCATCCGTTCCTAAATATTTGTCTTT 59.168 33.333 11.05 0.00 0.00 2.52
5190 8529 8.129211 CCATCCGTTCCTAAATATTTGTCTTTC 58.871 37.037 11.05 0.00 0.00 2.62
5191 8530 8.893727 CATCCGTTCCTAAATATTTGTCTTTCT 58.106 33.333 11.05 0.00 0.00 2.52
5193 8532 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
5194 8533 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
5209 8548 9.661563 TGTCTTTCTAGAGTTTTTAACAAGTGA 57.338 29.630 0.00 0.00 0.00 3.41
5210 8549 9.917872 GTCTTTCTAGAGTTTTTAACAAGTGAC 57.082 33.333 0.00 0.00 0.00 3.67
5211 8550 9.886132 TCTTTCTAGAGTTTTTAACAAGTGACT 57.114 29.630 0.00 0.00 0.00 3.41
5218 8557 8.975439 AGAGTTTTTAACAAGTGACTACATACG 58.025 33.333 0.00 0.00 0.00 3.06
5219 8558 8.876275 AGTTTTTAACAAGTGACTACATACGA 57.124 30.769 0.00 0.00 0.00 3.43
5220 8559 9.316730 AGTTTTTAACAAGTGACTACATACGAA 57.683 29.630 0.00 0.00 0.00 3.85
5221 8560 9.577003 GTTTTTAACAAGTGACTACATACGAAG 57.423 33.333 0.00 0.00 0.00 3.79
5222 8561 6.939551 TTAACAAGTGACTACATACGAAGC 57.060 37.500 0.00 0.00 0.00 3.86
5223 8562 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
5224 8563 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
5225 8564 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
5226 8565 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
5227 8566 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
5228 8567 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
5229 8568 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
5230 8569 6.311445 AGTGACTACATACGAAGCAAAATGAG 59.689 38.462 0.00 0.00 0.00 2.90
5231 8570 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
5232 8571 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
5233 8572 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
5234 8573 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
5235 8574 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
5236 8575 6.913170 ACATACGAAGCAAAATGAGTGAATT 58.087 32.000 0.00 0.00 0.00 2.17
5237 8576 7.370383 ACATACGAAGCAAAATGAGTGAATTT 58.630 30.769 0.00 0.00 0.00 1.82
5238 8577 8.511321 ACATACGAAGCAAAATGAGTGAATTTA 58.489 29.630 0.00 0.00 0.00 1.40
5239 8578 8.788813 CATACGAAGCAAAATGAGTGAATTTAC 58.211 33.333 0.00 0.00 0.00 2.01
5240 8579 6.734137 ACGAAGCAAAATGAGTGAATTTACA 58.266 32.000 2.93 0.00 0.00 2.41
5241 8580 6.636850 ACGAAGCAAAATGAGTGAATTTACAC 59.363 34.615 2.93 0.00 40.60 2.90
5274 8613 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
5276 8615 8.272545 TGTCTATATACATCCGTATGTGGTAC 57.727 38.462 3.56 0.00 45.99 3.34
5277 8616 8.105197 TGTCTATATACATCCGTATGTGGTACT 58.895 37.037 3.56 0.00 45.99 2.73
5278 8617 8.610896 GTCTATATACATCCGTATGTGGTACTC 58.389 40.741 3.56 0.00 45.99 2.59
5279 8618 6.770746 ATATACATCCGTATGTGGTACTCC 57.229 41.667 3.56 0.00 45.99 3.85
5280 8619 2.742348 ACATCCGTATGTGGTACTCCA 58.258 47.619 0.00 0.00 44.79 3.86
5281 8620 3.305720 ACATCCGTATGTGGTACTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
5282 8621 3.709653 ACATCCGTATGTGGTACTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
5283 8622 4.163458 ACATCCGTATGTGGTACTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
5284 8623 4.131649 TCCGTATGTGGTACTCCATTTG 57.868 45.455 3.69 0.00 46.20 2.32
5285 8624 3.770388 TCCGTATGTGGTACTCCATTTGA 59.230 43.478 3.69 0.00 46.20 2.69
5286 8625 4.119862 CCGTATGTGGTACTCCATTTGAG 58.880 47.826 3.69 0.00 46.20 3.02
5287 8626 4.142026 CCGTATGTGGTACTCCATTTGAGA 60.142 45.833 3.69 0.00 46.20 3.27
5288 8627 5.453339 CCGTATGTGGTACTCCATTTGAGAT 60.453 44.000 3.69 0.00 46.20 2.75
5289 8628 5.692204 CGTATGTGGTACTCCATTTGAGATC 59.308 44.000 3.69 0.00 46.20 2.75
5290 8629 5.965033 ATGTGGTACTCCATTTGAGATCT 57.035 39.130 0.00 0.00 46.20 2.75
5291 8630 5.344743 TGTGGTACTCCATTTGAGATCTC 57.655 43.478 16.21 16.21 46.20 2.75
5292 8631 5.026121 TGTGGTACTCCATTTGAGATCTCT 58.974 41.667 22.95 0.38 46.20 3.10
5293 8632 6.194967 TGTGGTACTCCATTTGAGATCTCTA 58.805 40.000 22.95 13.48 46.20 2.43
5294 8633 6.667848 TGTGGTACTCCATTTGAGATCTCTAA 59.332 38.462 22.95 21.19 46.20 2.10
5295 8634 7.180229 TGTGGTACTCCATTTGAGATCTCTAAA 59.820 37.037 22.95 19.53 46.20 1.85
5296 8635 8.041323 GTGGTACTCCATTTGAGATCTCTAAAA 58.959 37.037 22.95 15.91 46.20 1.52
5297 8636 8.602424 TGGTACTCCATTTGAGATCTCTAAAAA 58.398 33.333 22.95 15.24 44.42 1.94
5298 8637 9.103861 GGTACTCCATTTGAGATCTCTAAAAAG 57.896 37.037 22.95 19.30 44.42 2.27
5299 8638 9.877178 GTACTCCATTTGAGATCTCTAAAAAGA 57.123 33.333 22.95 16.71 44.42 2.52
5300 8639 8.785329 ACTCCATTTGAGATCTCTAAAAAGAC 57.215 34.615 22.95 0.00 44.42 3.01
5301 8640 8.378565 ACTCCATTTGAGATCTCTAAAAAGACA 58.621 33.333 22.95 0.00 44.42 3.41
5302 8641 9.224267 CTCCATTTGAGATCTCTAAAAAGACAA 57.776 33.333 22.95 4.09 44.42 3.18
5303 8642 9.573166 TCCATTTGAGATCTCTAAAAAGACAAA 57.427 29.630 22.95 12.48 30.56 2.83
5309 8648 9.877178 TGAGATCTCTAAAAAGACAAATACTCC 57.123 33.333 22.95 0.00 0.00 3.85
5310 8649 9.320352 GAGATCTCTAAAAAGACAAATACTCCC 57.680 37.037 15.80 0.00 0.00 4.30
5311 8650 9.052365 AGATCTCTAAAAAGACAAATACTCCCT 57.948 33.333 0.00 0.00 0.00 4.20
5312 8651 9.320352 GATCTCTAAAAAGACAAATACTCCCTC 57.680 37.037 0.00 0.00 0.00 4.30
5313 8652 7.621796 TCTCTAAAAAGACAAATACTCCCTCC 58.378 38.462 0.00 0.00 0.00 4.30
5314 8653 6.403878 TCTAAAAAGACAAATACTCCCTCCG 58.596 40.000 0.00 0.00 0.00 4.63
5315 8654 4.635699 AAAAGACAAATACTCCCTCCGT 57.364 40.909 0.00 0.00 0.00 4.69
5316 8655 5.750352 AAAAGACAAATACTCCCTCCGTA 57.250 39.130 0.00 0.00 0.00 4.02
5317 8656 5.750352 AAAGACAAATACTCCCTCCGTAA 57.250 39.130 0.00 0.00 0.00 3.18
5318 8657 5.750352 AAGACAAATACTCCCTCCGTAAA 57.250 39.130 0.00 0.00 0.00 2.01
5319 8658 5.952347 AGACAAATACTCCCTCCGTAAAT 57.048 39.130 0.00 0.00 0.00 1.40
5320 8659 6.309389 AGACAAATACTCCCTCCGTAAATT 57.691 37.500 0.00 0.00 0.00 1.82
5321 8660 7.427989 AGACAAATACTCCCTCCGTAAATTA 57.572 36.000 0.00 0.00 0.00 1.40
5322 8661 7.854337 AGACAAATACTCCCTCCGTAAATTAA 58.146 34.615 0.00 0.00 0.00 1.40
5323 8662 8.491958 AGACAAATACTCCCTCCGTAAATTAAT 58.508 33.333 0.00 0.00 0.00 1.40
5324 8663 9.768662 GACAAATACTCCCTCCGTAAATTAATA 57.231 33.333 0.00 0.00 0.00 0.98
5331 8670 8.312564 ACTCCCTCCGTAAATTAATATAAGAGC 58.687 37.037 0.00 0.00 0.00 4.09
5332 8671 7.318141 TCCCTCCGTAAATTAATATAAGAGCG 58.682 38.462 0.00 0.00 0.00 5.03
5333 8672 7.039504 TCCCTCCGTAAATTAATATAAGAGCGT 60.040 37.037 0.00 0.00 0.00 5.07
5334 8673 7.601508 CCCTCCGTAAATTAATATAAGAGCGTT 59.398 37.037 0.00 0.00 0.00 4.84
5335 8674 8.985805 CCTCCGTAAATTAATATAAGAGCGTTT 58.014 33.333 0.00 0.00 0.00 3.60
5362 8701 8.913656 AGATCGCTATTTTAGTTATCTAAACGC 58.086 33.333 5.64 7.87 43.20 4.84
5363 8702 8.813643 ATCGCTATTTTAGTTATCTAAACGCT 57.186 30.769 5.64 0.00 43.20 5.07
5364 8703 8.278482 TCGCTATTTTAGTTATCTAAACGCTC 57.722 34.615 5.64 0.00 43.20 5.03
5365 8704 8.133627 TCGCTATTTTAGTTATCTAAACGCTCT 58.866 33.333 5.64 0.00 43.20 4.09
5366 8705 8.753175 CGCTATTTTAGTTATCTAAACGCTCTT 58.247 33.333 5.64 0.00 43.20 2.85
5383 8722 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
5384 8723 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
5385 8724 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
5386 8725 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
5387 8726 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
5395 8734 9.725206 ATTAGTTTACAGAGGGAGTATTTAGGA 57.275 33.333 0.00 0.00 0.00 2.94
5396 8735 9.551339 TTAGTTTACAGAGGGAGTATTTAGGAA 57.449 33.333 0.00 0.00 0.00 3.36
5397 8736 7.849160 AGTTTACAGAGGGAGTATTTAGGAAC 58.151 38.462 0.00 0.00 0.00 3.62
5398 8737 6.461110 TTACAGAGGGAGTATTTAGGAACG 57.539 41.667 0.00 0.00 0.00 3.95
5399 8738 3.705072 ACAGAGGGAGTATTTAGGAACGG 59.295 47.826 0.00 0.00 0.00 4.44
5400 8739 3.958798 CAGAGGGAGTATTTAGGAACGGA 59.041 47.826 0.00 0.00 0.00 4.69
5401 8740 4.038162 CAGAGGGAGTATTTAGGAACGGAG 59.962 50.000 0.00 0.00 0.00 4.63
5402 8741 3.306613 AGGGAGTATTTAGGAACGGAGG 58.693 50.000 0.00 0.00 0.00 4.30
5403 8742 2.367894 GGGAGTATTTAGGAACGGAGGG 59.632 54.545 0.00 0.00 0.00 4.30
5404 8743 3.303049 GGAGTATTTAGGAACGGAGGGA 58.697 50.000 0.00 0.00 0.00 4.20
5405 8744 3.321396 GGAGTATTTAGGAACGGAGGGAG 59.679 52.174 0.00 0.00 0.00 4.30
5406 8745 3.959449 GAGTATTTAGGAACGGAGGGAGT 59.041 47.826 0.00 0.00 0.00 3.85
5407 8746 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
5408 8747 5.713807 AGTATTTAGGAACGGAGGGAGTAT 58.286 41.667 0.00 0.00 0.00 2.12
5409 8748 5.774184 AGTATTTAGGAACGGAGGGAGTATC 59.226 44.000 0.00 0.00 0.00 2.24
5410 8749 3.675348 TTAGGAACGGAGGGAGTATCA 57.325 47.619 0.00 0.00 36.25 2.15
5411 8750 2.074729 AGGAACGGAGGGAGTATCAG 57.925 55.000 0.00 0.00 36.25 2.90
5412 8751 1.288335 AGGAACGGAGGGAGTATCAGT 59.712 52.381 0.00 0.00 36.25 3.41
5413 8752 1.409427 GGAACGGAGGGAGTATCAGTG 59.591 57.143 0.00 0.00 36.25 3.66
5414 8753 2.376109 GAACGGAGGGAGTATCAGTGA 58.624 52.381 0.00 0.00 36.25 3.41
5415 8754 2.526888 ACGGAGGGAGTATCAGTGAA 57.473 50.000 0.00 0.00 36.25 3.18
5546 8899 7.106239 AGACAAGATGTGGGTTATTACAAGAG 58.894 38.462 0.00 0.00 0.00 2.85
5551 8904 5.957842 TGTGGGTTATTACAAGAGCAAAG 57.042 39.130 0.00 0.00 0.00 2.77
5557 8910 2.656947 TTACAAGAGCAAAGTGGCCT 57.343 45.000 3.32 0.00 0.00 5.19
5570 8923 1.064166 AGTGGCCTCCATTTCTCCATG 60.064 52.381 3.32 0.00 35.28 3.66
5623 8976 1.005630 GAACACGTGAGCCAGCTCT 60.006 57.895 25.01 0.00 43.12 4.09
5624 8977 1.287730 GAACACGTGAGCCAGCTCTG 61.288 60.000 25.01 14.33 43.12 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.706691 ATTCCACAGGTGTATATTACTTTATCG 57.293 33.333 0.00 0.00 0.00 2.92
90 91 4.487714 AAGCCGAACATCTGATAAAGGA 57.512 40.909 0.00 0.00 0.00 3.36
128 129 3.255725 CCGGCGACTCATTTAACTGTAA 58.744 45.455 9.30 0.00 0.00 2.41
208 209 9.618890 TCTTCTCTCATGTTTCTTATTTATGGG 57.381 33.333 0.00 0.00 0.00 4.00
236 486 6.798427 TTAATAATATTGCACCAGCCCAAA 57.202 33.333 0.00 0.00 41.13 3.28
271 521 3.617531 CGAGGGAGTAGTTGCAATGAACT 60.618 47.826 0.59 6.71 39.54 3.01
282 532 3.463048 TTTAGGAACCGAGGGAGTAGT 57.537 47.619 0.00 0.00 0.00 2.73
285 535 6.141790 ACTTATATTTAGGAACCGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
286 536 6.494146 AGACTTATATTTAGGAACCGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
287 537 6.379579 AGACTTATATTTAGGAACCGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
288 538 6.667558 AGACTTATATTTAGGAACCGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
289 539 8.959705 AAAAGACTTATATTTAGGAACCGAGG 57.040 34.615 0.00 0.00 0.00 4.63
317 567 9.009327 CGTATGTTGTATTCCATTTGAAATGTC 57.991 33.333 15.93 3.21 36.33 3.06
318 568 7.973388 CCGTATGTTGTATTCCATTTGAAATGT 59.027 33.333 15.93 1.43 36.33 2.71
319 569 8.187480 TCCGTATGTTGTATTCCATTTGAAATG 58.813 33.333 10.84 10.84 36.33 2.32
320 570 8.287439 TCCGTATGTTGTATTCCATTTGAAAT 57.713 30.769 0.00 0.00 36.33 2.17
321 571 7.689446 TCCGTATGTTGTATTCCATTTGAAA 57.311 32.000 0.00 0.00 36.33 2.69
322 572 7.338196 ACATCCGTATGTTGTATTCCATTTGAA 59.662 33.333 0.00 0.00 44.07 2.69
323 573 6.826231 ACATCCGTATGTTGTATTCCATTTGA 59.174 34.615 0.00 0.00 44.07 2.69
324 574 7.026631 ACATCCGTATGTTGTATTCCATTTG 57.973 36.000 0.00 0.00 44.07 2.32
325 575 8.783093 CATACATCCGTATGTTGTATTCCATTT 58.217 33.333 0.00 0.00 46.70 2.32
326 576 8.322906 CATACATCCGTATGTTGTATTCCATT 57.677 34.615 0.00 0.00 46.70 3.16
327 577 7.905604 CATACATCCGTATGTTGTATTCCAT 57.094 36.000 0.00 0.00 46.70 3.41
367 617 7.141363 ACAAAGCAAAATGAGTGAATCTACAC 58.859 34.615 0.00 0.00 40.60 2.90
368 618 7.275888 ACAAAGCAAAATGAGTGAATCTACA 57.724 32.000 0.00 0.00 0.00 2.74
369 619 9.282247 CATACAAAGCAAAATGAGTGAATCTAC 57.718 33.333 0.00 0.00 0.00 2.59
370 620 9.013229 ACATACAAAGCAAAATGAGTGAATCTA 57.987 29.630 0.00 0.00 0.00 1.98
371 621 7.889469 ACATACAAAGCAAAATGAGTGAATCT 58.111 30.769 0.00 0.00 0.00 2.40
372 622 9.624697 TTACATACAAAGCAAAATGAGTGAATC 57.375 29.630 0.00 0.00 0.00 2.52
374 624 9.624697 GATTACATACAAAGCAAAATGAGTGAA 57.375 29.630 0.00 0.00 0.00 3.18
375 625 8.791675 TGATTACATACAAAGCAAAATGAGTGA 58.208 29.630 0.00 0.00 0.00 3.41
376 626 8.853345 GTGATTACATACAAAGCAAAATGAGTG 58.147 33.333 0.00 0.00 0.00 3.51
377 627 8.796475 AGTGATTACATACAAAGCAAAATGAGT 58.204 29.630 0.00 0.00 0.00 3.41
378 628 9.630098 AAGTGATTACATACAAAGCAAAATGAG 57.370 29.630 0.00 0.00 0.00 2.90
379 629 9.409312 CAAGTGATTACATACAAAGCAAAATGA 57.591 29.630 0.00 0.00 0.00 2.57
380 630 9.195411 ACAAGTGATTACATACAAAGCAAAATG 57.805 29.630 0.00 0.00 0.00 2.32
381 631 9.762933 AACAAGTGATTACATACAAAGCAAAAT 57.237 25.926 0.00 0.00 0.00 1.82
382 632 9.029243 CAACAAGTGATTACATACAAAGCAAAA 57.971 29.630 0.00 0.00 0.00 2.44
383 633 7.651304 CCAACAAGTGATTACATACAAAGCAAA 59.349 33.333 0.00 0.00 0.00 3.68
384 634 7.013750 TCCAACAAGTGATTACATACAAAGCAA 59.986 33.333 0.00 0.00 0.00 3.91
385 635 6.488344 TCCAACAAGTGATTACATACAAAGCA 59.512 34.615 0.00 0.00 0.00 3.91
386 636 6.908825 TCCAACAAGTGATTACATACAAAGC 58.091 36.000 0.00 0.00 0.00 3.51
387 637 9.559958 GATTCCAACAAGTGATTACATACAAAG 57.440 33.333 0.00 0.00 0.00 2.77
388 638 9.295825 AGATTCCAACAAGTGATTACATACAAA 57.704 29.630 0.00 0.00 0.00 2.83
389 639 8.862325 AGATTCCAACAAGTGATTACATACAA 57.138 30.769 0.00 0.00 0.00 2.41
390 640 8.321353 AGAGATTCCAACAAGTGATTACATACA 58.679 33.333 0.00 0.00 0.00 2.29
391 641 8.723942 AGAGATTCCAACAAGTGATTACATAC 57.276 34.615 0.00 0.00 0.00 2.39
393 643 9.739276 TTTAGAGATTCCAACAAGTGATTACAT 57.261 29.630 0.00 0.00 0.00 2.29
394 644 9.567776 TTTTAGAGATTCCAACAAGTGATTACA 57.432 29.630 0.00 0.00 0.00 2.41
397 647 9.354673 TCTTTTTAGAGATTCCAACAAGTGATT 57.645 29.630 0.00 0.00 0.00 2.57
398 648 8.787852 GTCTTTTTAGAGATTCCAACAAGTGAT 58.212 33.333 0.00 0.00 0.00 3.06
399 649 7.993183 AGTCTTTTTAGAGATTCCAACAAGTGA 59.007 33.333 0.00 0.00 0.00 3.41
400 650 8.159344 AGTCTTTTTAGAGATTCCAACAAGTG 57.841 34.615 0.00 0.00 0.00 3.16
417 667 8.765517 TCCTCCGTTCCTAAATATAGTCTTTTT 58.234 33.333 0.00 0.00 0.00 1.94
418 668 8.315220 TCCTCCGTTCCTAAATATAGTCTTTT 57.685 34.615 0.00 0.00 0.00 2.27
419 669 7.909485 TCCTCCGTTCCTAAATATAGTCTTT 57.091 36.000 0.00 0.00 0.00 2.52
420 670 7.564292 ACTTCCTCCGTTCCTAAATATAGTCTT 59.436 37.037 0.00 0.00 0.00 3.01
421 671 7.068061 ACTTCCTCCGTTCCTAAATATAGTCT 58.932 38.462 0.00 0.00 0.00 3.24
422 672 7.287512 ACTTCCTCCGTTCCTAAATATAGTC 57.712 40.000 0.00 0.00 0.00 2.59
423 673 7.781693 TGTACTTCCTCCGTTCCTAAATATAGT 59.218 37.037 0.00 0.00 0.00 2.12
424 674 8.174733 TGTACTTCCTCCGTTCCTAAATATAG 57.825 38.462 0.00 0.00 0.00 1.31
425 675 8.537728 TTGTACTTCCTCCGTTCCTAAATATA 57.462 34.615 0.00 0.00 0.00 0.86
426 676 7.427989 TTGTACTTCCTCCGTTCCTAAATAT 57.572 36.000 0.00 0.00 0.00 1.28
427 677 6.855763 TTGTACTTCCTCCGTTCCTAAATA 57.144 37.500 0.00 0.00 0.00 1.40
428 678 5.750352 TTGTACTTCCTCCGTTCCTAAAT 57.250 39.130 0.00 0.00 0.00 1.40
429 679 5.549742 TTTGTACTTCCTCCGTTCCTAAA 57.450 39.130 0.00 0.00 0.00 1.85
430 680 5.246656 TCATTTGTACTTCCTCCGTTCCTAA 59.753 40.000 0.00 0.00 0.00 2.69
431 681 4.773674 TCATTTGTACTTCCTCCGTTCCTA 59.226 41.667 0.00 0.00 0.00 2.94
432 682 3.581332 TCATTTGTACTTCCTCCGTTCCT 59.419 43.478 0.00 0.00 0.00 3.36
433 683 3.934068 TCATTTGTACTTCCTCCGTTCC 58.066 45.455 0.00 0.00 0.00 3.62
434 684 5.934935 TTTCATTTGTACTTCCTCCGTTC 57.065 39.130 0.00 0.00 0.00 3.95
435 685 6.059484 TCTTTTCATTTGTACTTCCTCCGTT 58.941 36.000 0.00 0.00 0.00 4.44
436 686 5.617252 TCTTTTCATTTGTACTTCCTCCGT 58.383 37.500 0.00 0.00 0.00 4.69
437 687 6.743575 ATCTTTTCATTTGTACTTCCTCCG 57.256 37.500 0.00 0.00 0.00 4.63
438 688 8.110860 TCAATCTTTTCATTTGTACTTCCTCC 57.889 34.615 0.00 0.00 0.00 4.30
439 689 9.780413 GATCAATCTTTTCATTTGTACTTCCTC 57.220 33.333 0.00 0.00 0.00 3.71
440 690 9.525826 AGATCAATCTTTTCATTTGTACTTCCT 57.474 29.630 0.00 0.00 31.97 3.36
474 724 1.519455 CCTCCGCCGTGAATGAGTC 60.519 63.158 0.00 0.00 0.00 3.36
479 729 3.254024 AACTGCCTCCGCCGTGAAT 62.254 57.895 0.00 0.00 32.16 2.57
489 739 2.045536 CCTCCCTGCAACTGCCTC 60.046 66.667 0.00 0.00 41.18 4.70
511 761 5.241506 CCAACTGTATGTGTCAGGTTCATTT 59.758 40.000 0.00 0.00 37.25 2.32
523 773 2.859165 ACTCCACCCAACTGTATGTG 57.141 50.000 0.00 0.00 0.00 3.21
524 774 4.986054 TTTACTCCACCCAACTGTATGT 57.014 40.909 0.00 0.00 0.00 2.29
525 775 6.350110 CCATTTTTACTCCACCCAACTGTATG 60.350 42.308 0.00 0.00 0.00 2.39
526 776 5.714806 CCATTTTTACTCCACCCAACTGTAT 59.285 40.000 0.00 0.00 0.00 2.29
533 783 4.290985 TGATCTCCATTTTTACTCCACCCA 59.709 41.667 0.00 0.00 0.00 4.51
554 804 6.549364 ACAACCTCCACACTATCAAAAATTGA 59.451 34.615 0.00 0.00 45.01 2.57
555 805 6.748132 ACAACCTCCACACTATCAAAAATTG 58.252 36.000 0.00 0.00 0.00 2.32
557 807 6.738453 GCAACAACCTCCACACTATCAAAAAT 60.738 38.462 0.00 0.00 0.00 1.82
558 808 5.451242 GCAACAACCTCCACACTATCAAAAA 60.451 40.000 0.00 0.00 0.00 1.94
569 819 1.109323 AAGGCAGCAACAACCTCCAC 61.109 55.000 0.00 0.00 31.86 4.02
594 844 7.768120 CAGAAGCTATTGAAGAAGAGTAACCAT 59.232 37.037 0.00 0.00 0.00 3.55
645 895 6.573434 TGACATGAGTAAAGTCAAGCGATAT 58.427 36.000 0.00 0.00 39.15 1.63
646 896 5.961272 TGACATGAGTAAAGTCAAGCGATA 58.039 37.500 0.00 0.00 39.15 2.92
647 897 4.820897 TGACATGAGTAAAGTCAAGCGAT 58.179 39.130 0.00 0.00 39.15 4.58
649 899 4.867047 AGATGACATGAGTAAAGTCAAGCG 59.133 41.667 0.00 0.00 44.47 4.68
694 982 5.105997 GCCAGTTCATGAGCTACTTGATTTT 60.106 40.000 12.11 0.00 33.71 1.82
750 1038 0.617413 CTGAGGCAGTGTCCTTCCAT 59.383 55.000 7.43 0.00 36.38 3.41
762 1050 4.225942 AGAGGAATAAACACATCTGAGGCA 59.774 41.667 0.00 0.00 0.00 4.75
769 1057 9.937175 GCTTACAATAAGAGGAATAAACACATC 57.063 33.333 0.00 0.00 0.00 3.06
775 1063 7.715249 AGCATCGCTTACAATAAGAGGAATAAA 59.285 33.333 0.00 0.00 33.89 1.40
790 1078 2.708386 AGGATCGTAGCATCGCTTAC 57.292 50.000 0.00 0.00 40.44 2.34
800 1088 9.542462 TCCTTTATTCATTTGTAAGGATCGTAG 57.458 33.333 0.00 0.00 39.43 3.51
1006 2061 9.875675 GTAATGATGTAGAAGATTCATTTCTGC 57.124 33.333 2.71 0.00 39.07 4.26
1013 2068 7.981789 GTCTGTGGTAATGATGTAGAAGATTCA 59.018 37.037 0.00 0.00 0.00 2.57
1028 2083 2.290008 TGTGCAATCGGTCTGTGGTAAT 60.290 45.455 0.00 0.00 0.00 1.89
1032 2087 1.131126 GATTGTGCAATCGGTCTGTGG 59.869 52.381 8.86 0.00 37.97 4.17
1062 2117 1.191489 TCGCCAGAATCACCACAGGA 61.191 55.000 0.00 0.00 0.00 3.86
1076 2131 0.102481 GAGCCGAAGAACTATCGCCA 59.898 55.000 0.00 0.00 38.93 5.69
1091 2146 2.683933 TTCTCGTGGGGGAGAGCC 60.684 66.667 0.00 0.00 43.49 4.70
1174 2229 1.832219 CGATCAAGCAGATGGGGGA 59.168 57.895 0.00 0.00 37.00 4.81
1194 2252 0.458716 GAAGAAACGAGGGAGGCGAG 60.459 60.000 0.00 0.00 0.00 5.03
1198 2256 0.889306 AGACGAAGAAACGAGGGAGG 59.111 55.000 0.00 0.00 37.03 4.30
1483 2542 4.965532 AGCCCTGAACTATGACAGATTACT 59.034 41.667 0.00 0.00 36.38 2.24
1484 2543 5.283457 AGCCCTGAACTATGACAGATTAC 57.717 43.478 0.00 0.00 36.38 1.89
1485 2544 5.957771 AAGCCCTGAACTATGACAGATTA 57.042 39.130 0.00 0.00 36.38 1.75
1486 2545 4.851639 AAGCCCTGAACTATGACAGATT 57.148 40.909 0.00 0.00 36.38 2.40
1487 2546 4.101741 GGTAAGCCCTGAACTATGACAGAT 59.898 45.833 0.00 0.00 36.38 2.90
1488 2547 3.451178 GGTAAGCCCTGAACTATGACAGA 59.549 47.826 0.00 0.00 36.38 3.41
1489 2548 3.197766 TGGTAAGCCCTGAACTATGACAG 59.802 47.826 0.00 0.00 0.00 3.51
1490 2549 3.178046 TGGTAAGCCCTGAACTATGACA 58.822 45.455 0.00 0.00 0.00 3.58
1491 2550 3.906720 TGGTAAGCCCTGAACTATGAC 57.093 47.619 0.00 0.00 0.00 3.06
1492 2551 3.780294 ACATGGTAAGCCCTGAACTATGA 59.220 43.478 0.00 0.00 36.10 2.15
1493 2552 4.156455 ACATGGTAAGCCCTGAACTATG 57.844 45.455 0.00 0.00 37.89 2.23
1494 2553 4.475016 AGAACATGGTAAGCCCTGAACTAT 59.525 41.667 0.00 0.00 34.90 2.12
1495 2554 3.844211 AGAACATGGTAAGCCCTGAACTA 59.156 43.478 0.00 0.00 34.90 2.24
1496 2555 2.644798 AGAACATGGTAAGCCCTGAACT 59.355 45.455 0.00 0.00 34.90 3.01
1497 2556 3.073274 AGAACATGGTAAGCCCTGAAC 57.927 47.619 0.00 0.00 34.90 3.18
1498 2557 3.370527 GCTAGAACATGGTAAGCCCTGAA 60.371 47.826 6.34 0.00 34.90 3.02
1499 2558 2.170607 GCTAGAACATGGTAAGCCCTGA 59.829 50.000 6.34 0.00 34.90 3.86
1500 2559 2.565841 GCTAGAACATGGTAAGCCCTG 58.434 52.381 6.34 0.00 36.60 4.45
1501 2560 1.490910 GGCTAGAACATGGTAAGCCCT 59.509 52.381 21.13 0.02 45.69 5.19
1502 2561 1.968704 GGCTAGAACATGGTAAGCCC 58.031 55.000 21.13 7.53 45.69 5.19
1504 2563 2.356069 GCAAGGCTAGAACATGGTAAGC 59.644 50.000 8.72 8.72 0.00 3.09
1505 2564 3.609853 TGCAAGGCTAGAACATGGTAAG 58.390 45.455 0.00 0.00 0.00 2.34
1506 2565 3.009033 ACTGCAAGGCTAGAACATGGTAA 59.991 43.478 0.00 0.00 39.30 2.85
1507 2566 2.571653 ACTGCAAGGCTAGAACATGGTA 59.428 45.455 0.00 0.00 39.30 3.25
1508 2567 1.352352 ACTGCAAGGCTAGAACATGGT 59.648 47.619 0.00 0.00 39.30 3.55
1509 2568 2.119801 ACTGCAAGGCTAGAACATGG 57.880 50.000 0.00 0.00 39.30 3.66
1510 2569 5.007430 CAGATTACTGCAAGGCTAGAACATG 59.993 44.000 0.00 0.00 39.30 3.21
1511 2570 5.121811 CAGATTACTGCAAGGCTAGAACAT 58.878 41.667 0.00 0.00 39.30 2.71
1512 2571 4.507710 CAGATTACTGCAAGGCTAGAACA 58.492 43.478 0.00 0.00 39.30 3.18
1525 2584 4.384056 CCCTGAACTATGGCAGATTACTG 58.616 47.826 0.00 0.00 45.91 2.74
1526 2585 3.181450 GCCCTGAACTATGGCAGATTACT 60.181 47.826 0.00 0.00 44.70 2.24
1535 2594 2.173569 AGCCTAAAGCCCTGAACTATGG 59.826 50.000 0.00 0.00 45.47 2.74
1579 2653 2.977914 TCTCAGCCAACAATGTCTAGC 58.022 47.619 0.00 0.00 0.00 3.42
1583 2657 2.626088 GCTTCTCAGCCAACAATGTC 57.374 50.000 0.00 0.00 40.61 3.06
1629 2704 1.697432 TCCTTTCCTTTGAAGAGGCGA 59.303 47.619 0.00 0.00 36.71 5.54
1656 2731 0.536460 TTGTCAAGGAACCGGCCTTC 60.536 55.000 10.18 3.38 44.89 3.46
1750 2825 3.818787 GCACTGCGGCTCAATGGG 61.819 66.667 0.00 0.00 0.00 4.00
1791 2866 7.576403 AGTTTACAAGGTCTTAGGGTACAAAA 58.424 34.615 0.00 0.00 0.00 2.44
1841 2916 3.646946 CTTTTCTTTGGAAAGAGCTGCC 58.353 45.455 0.00 0.00 45.01 4.85
1885 2960 2.439880 TCCAGTTCCACCACACATAACA 59.560 45.455 0.00 0.00 0.00 2.41
1938 3013 6.546772 ACACGGTTATTTTCTACAGGGAAAAA 59.453 34.615 6.50 0.00 44.71 1.94
1951 3026 7.536855 TGTTGTTTTACTGACACGGTTATTTT 58.463 30.769 0.00 0.00 0.00 1.82
1988 3065 8.087136 GGGAGAACTATACCTTAACCTAATTCG 58.913 40.741 0.00 0.00 0.00 3.34
2201 3278 3.193479 GGGAAATACACCAAGCCAAGAAG 59.807 47.826 0.00 0.00 0.00 2.85
2337 3415 5.991933 TTAATTTGCTTTGGCTCCACATA 57.008 34.783 0.00 0.00 39.59 2.29
2371 3449 4.626172 GCGACCTCCTTAGTTTTAGTCAAG 59.374 45.833 0.00 0.00 0.00 3.02
2377 3455 2.353011 CCGTGCGACCTCCTTAGTTTTA 60.353 50.000 0.00 0.00 0.00 1.52
2396 3474 4.654091 AAATCACAATAAATCTGGGCCG 57.346 40.909 0.00 0.00 0.00 6.13
2399 3477 6.862209 TCCGAAAAATCACAATAAATCTGGG 58.138 36.000 0.00 0.00 0.00 4.45
2408 3486 8.739039 TGACAAATATCTCCGAAAAATCACAAT 58.261 29.630 0.00 0.00 0.00 2.71
2460 3538 5.640783 CACTGTTATCAAGTCAGAAGCATGA 59.359 40.000 0.00 0.00 33.93 3.07
2461 3539 5.640783 TCACTGTTATCAAGTCAGAAGCATG 59.359 40.000 0.00 0.00 33.93 4.06
2462 3540 5.798132 TCACTGTTATCAAGTCAGAAGCAT 58.202 37.500 0.00 0.00 33.93 3.79
2463 3541 5.213891 TCACTGTTATCAAGTCAGAAGCA 57.786 39.130 0.00 0.00 33.93 3.91
2464 3542 6.734104 ATTCACTGTTATCAAGTCAGAAGC 57.266 37.500 0.00 0.00 33.93 3.86
2465 3543 8.092521 ACAATTCACTGTTATCAAGTCAGAAG 57.907 34.615 0.00 0.00 33.93 2.85
2466 3544 8.450578 AACAATTCACTGTTATCAAGTCAGAA 57.549 30.769 0.00 0.00 37.76 3.02
2467 3545 8.450578 AAACAATTCACTGTTATCAAGTCAGA 57.549 30.769 0.00 0.00 38.59 3.27
2468 3546 9.599322 GTAAACAATTCACTGTTATCAAGTCAG 57.401 33.333 0.00 0.00 38.59 3.51
2469 3547 9.337396 AGTAAACAATTCACTGTTATCAAGTCA 57.663 29.630 0.00 0.00 38.59 3.41
2470 3548 9.599322 CAGTAAACAATTCACTGTTATCAAGTC 57.401 33.333 0.00 0.00 38.59 3.01
2471 3549 9.337396 TCAGTAAACAATTCACTGTTATCAAGT 57.663 29.630 0.00 0.00 38.59 3.16
2518 3596 3.806949 AGAGTGGCCATCCTTTTACAA 57.193 42.857 9.72 0.00 0.00 2.41
2677 3755 0.970427 TGATGCGACACCTGAGGCTA 60.970 55.000 0.00 0.00 0.00 3.93
2968 4046 3.081710 ACCTTTAAAACCTCCATCGGG 57.918 47.619 0.00 0.00 0.00 5.14
3034 4112 3.438216 TGTGCCCAGATCAAGATCAAA 57.562 42.857 12.21 0.00 40.22 2.69
3068 4146 5.411831 TTCTGCTTGTACTCATCTGTGAT 57.588 39.130 0.00 0.00 32.98 3.06
3109 4187 4.672587 TCCTCTGATACAATTTCCCTCG 57.327 45.455 0.00 0.00 0.00 4.63
3264 4342 6.775088 AGTAGTACATGCGACAATTTCATTG 58.225 36.000 2.52 0.00 45.59 2.82
3293 4371 4.985538 AGAAGAAAATTCAGTGGTGGCTA 58.014 39.130 0.00 0.00 0.00 3.93
3322 4400 3.582647 TCCACATCAGCAAGACCTAAAGA 59.417 43.478 0.00 0.00 0.00 2.52
3427 4505 7.592938 CCACACAGAAAAATAGCTATCAACAA 58.407 34.615 6.72 0.00 0.00 2.83
3481 4559 1.541233 GCAGTCACAAGTGTACCAGCT 60.541 52.381 0.00 0.00 0.00 4.24
3611 4689 6.701400 ACACTTCAAAATACAAATTCACAGCC 59.299 34.615 0.00 0.00 0.00 4.85
3642 4720 7.108847 ACCAAAGTTTTCCAATTTCATTCACA 58.891 30.769 0.00 0.00 0.00 3.58
3706 4849 7.671302 CCAACTACTATCTACTAACCATGCAT 58.329 38.462 0.00 0.00 0.00 3.96
3711 4854 5.953548 TGTGCCAACTACTATCTACTAACCA 59.046 40.000 0.00 0.00 0.00 3.67
3895 5040 6.863126 AGCATTTTTCTTCACACTTAATTCCG 59.137 34.615 0.00 0.00 0.00 4.30
4020 5166 6.051179 AGTCCTCACCCTTTATAAAGTGAC 57.949 41.667 20.99 15.93 34.20 3.67
4042 5188 8.848182 GGAGGGAGTATATATGTTATTACGGAG 58.152 40.741 0.00 0.00 0.00 4.63
4043 5189 7.500227 CGGAGGGAGTATATATGTTATTACGGA 59.500 40.741 0.00 0.00 0.00 4.69
4044 5190 7.284034 ACGGAGGGAGTATATATGTTATTACGG 59.716 40.741 0.00 0.00 0.00 4.02
4045 5191 8.218338 ACGGAGGGAGTATATATGTTATTACG 57.782 38.462 0.00 0.00 0.00 3.18
4047 5193 9.193806 GGAACGGAGGGAGTATATATGTTATTA 57.806 37.037 0.00 0.00 0.00 0.98
4098 5253 4.830600 TGCTCCGTATGTAGTCCATATTGA 59.169 41.667 0.00 0.00 38.29 2.57
4116 5271 7.066766 AGAGTGTAGATTCATTCATTTTGCTCC 59.933 37.037 0.00 0.00 0.00 4.70
4128 5283 7.790027 AGACATGCTTTAGAGTGTAGATTCAT 58.210 34.615 0.00 0.00 0.00 2.57
4161 5326 8.466617 AGAGATTTCAATATGGACTACGTACT 57.533 34.615 0.00 0.00 0.00 2.73
4336 5501 6.807230 CGTACTGATCTTTAACTAGTTGCTGT 59.193 38.462 18.56 11.44 0.00 4.40
4338 5503 7.154435 TCGTACTGATCTTTAACTAGTTGCT 57.846 36.000 18.56 0.00 0.00 3.91
4360 5525 7.544217 TGGATTGTGGTTCGTATAATCATATCG 59.456 37.037 0.00 0.00 30.17 2.92
4465 5631 6.814954 AGAGGCTCAAATAGAACTAATCCA 57.185 37.500 18.26 0.00 0.00 3.41
4499 5666 8.962884 AAATTTTTGCAGAGTTTGTTAGGAAT 57.037 26.923 0.00 0.00 0.00 3.01
4658 5825 7.798596 AATATGCTCTCCAACTAGACAAATG 57.201 36.000 0.00 0.00 0.00 2.32
4685 5857 1.953559 TGCCGATAAATGAGTGGAGC 58.046 50.000 0.00 0.00 0.00 4.70
4701 5873 5.579511 CCTCATGAATGTTGAAAGAAATGCC 59.420 40.000 0.00 0.00 0.00 4.40
4713 5885 3.584406 TCTGACAGACCCTCATGAATGTT 59.416 43.478 0.00 0.00 0.00 2.71
4755 5947 5.116180 GCCCATGCTAAAAATTTACCCTTC 58.884 41.667 0.00 0.00 33.53 3.46
4801 5993 6.808321 TCAGTACAGGCTAACCATTATTCT 57.192 37.500 0.00 0.00 39.06 2.40
4802 5994 7.217200 TGATCAGTACAGGCTAACCATTATTC 58.783 38.462 0.00 0.00 39.06 1.75
4803 5995 7.071196 TCTGATCAGTACAGGCTAACCATTATT 59.929 37.037 21.92 0.00 39.06 1.40
4804 5996 6.554982 TCTGATCAGTACAGGCTAACCATTAT 59.445 38.462 21.92 0.00 39.06 1.28
4806 5998 4.716784 TCTGATCAGTACAGGCTAACCATT 59.283 41.667 21.92 0.00 39.06 3.16
4807 5999 4.290093 TCTGATCAGTACAGGCTAACCAT 58.710 43.478 21.92 0.00 39.06 3.55
4808 6000 3.708451 TCTGATCAGTACAGGCTAACCA 58.292 45.455 21.92 0.00 39.06 3.67
4809 6001 4.946478 ATCTGATCAGTACAGGCTAACC 57.054 45.455 21.92 0.00 36.22 2.85
4810 6002 7.044798 AGAAAATCTGATCAGTACAGGCTAAC 58.955 38.462 21.92 5.50 36.22 2.34
4811 6003 7.124901 AGAGAAAATCTGATCAGTACAGGCTAA 59.875 37.037 21.92 0.00 36.69 3.09
4812 6004 6.609212 AGAGAAAATCTGATCAGTACAGGCTA 59.391 38.462 21.92 0.62 36.69 3.93
4813 6005 5.424895 AGAGAAAATCTGATCAGTACAGGCT 59.575 40.000 21.92 13.08 36.69 4.58
4814 6006 5.669477 AGAGAAAATCTGATCAGTACAGGC 58.331 41.667 21.92 8.91 36.69 4.85
4815 6007 7.326454 TGAAGAGAAAATCTGATCAGTACAGG 58.674 38.462 21.92 0.00 38.67 4.00
4816 6008 7.492020 CCTGAAGAGAAAATCTGATCAGTACAG 59.508 40.741 21.92 14.64 38.67 2.74
4817 6009 7.038729 ACCTGAAGAGAAAATCTGATCAGTACA 60.039 37.037 21.92 3.73 38.67 2.90
4818 6010 7.327214 ACCTGAAGAGAAAATCTGATCAGTAC 58.673 38.462 21.92 10.07 38.67 2.73
4848 6042 6.874134 AGAACATTATTCTGTACTCGCAACTT 59.126 34.615 0.00 0.00 0.00 2.66
4849 6043 6.311445 CAGAACATTATTCTGTACTCGCAACT 59.689 38.462 8.24 0.00 40.63 3.16
4852 6046 5.961272 TCAGAACATTATTCTGTACTCGCA 58.039 37.500 14.55 0.00 44.58 5.10
5009 6214 3.244976 GCAATTGATTGTGCTGTGTACC 58.755 45.455 10.34 0.00 39.88 3.34
5018 6223 4.242475 AGCTGATTGTGCAATTGATTGTG 58.758 39.130 10.34 0.00 39.88 3.33
5072 8410 6.772605 TGTTTATCTAGGCACATGCATCTAT 58.227 36.000 6.15 0.00 44.36 1.98
5120 8459 0.388520 GAACAGCATTTTCCGGCCAC 60.389 55.000 2.24 0.00 0.00 5.01
5124 8463 3.057315 ACTTGATGAACAGCATTTTCCGG 60.057 43.478 0.00 0.00 37.34 5.14
5125 8464 4.164822 ACTTGATGAACAGCATTTTCCG 57.835 40.909 0.00 0.00 37.34 4.30
5162 8501 6.992715 AGACAAATATTTAGGAACGGATGGAG 59.007 38.462 0.00 0.00 0.00 3.86
5163 8502 6.895782 AGACAAATATTTAGGAACGGATGGA 58.104 36.000 0.00 0.00 0.00 3.41
5164 8503 7.568199 AAGACAAATATTTAGGAACGGATGG 57.432 36.000 0.00 0.00 0.00 3.51
5165 8504 8.893727 AGAAAGACAAATATTTAGGAACGGATG 58.106 33.333 0.00 0.00 0.00 3.51
5168 8507 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
5183 8522 9.661563 TCACTTGTTAAAAACTCTAGAAAGACA 57.338 29.630 0.00 0.00 0.00 3.41
5184 8523 9.917872 GTCACTTGTTAAAAACTCTAGAAAGAC 57.082 33.333 0.00 0.00 0.00 3.01
5185 8524 9.886132 AGTCACTTGTTAAAAACTCTAGAAAGA 57.114 29.630 0.00 0.00 0.00 2.52
5192 8531 8.975439 CGTATGTAGTCACTTGTTAAAAACTCT 58.025 33.333 0.00 0.00 0.00 3.24
5193 8532 8.971321 TCGTATGTAGTCACTTGTTAAAAACTC 58.029 33.333 0.00 0.00 0.00 3.01
5194 8533 8.876275 TCGTATGTAGTCACTTGTTAAAAACT 57.124 30.769 0.00 0.00 0.00 2.66
5195 8534 9.577003 CTTCGTATGTAGTCACTTGTTAAAAAC 57.423 33.333 0.00 0.00 0.00 2.43
5196 8535 8.277713 GCTTCGTATGTAGTCACTTGTTAAAAA 58.722 33.333 0.00 0.00 0.00 1.94
5197 8536 7.438757 TGCTTCGTATGTAGTCACTTGTTAAAA 59.561 33.333 0.00 0.00 0.00 1.52
5198 8537 6.924612 TGCTTCGTATGTAGTCACTTGTTAAA 59.075 34.615 0.00 0.00 0.00 1.52
5199 8538 6.448852 TGCTTCGTATGTAGTCACTTGTTAA 58.551 36.000 0.00 0.00 0.00 2.01
5200 8539 6.016213 TGCTTCGTATGTAGTCACTTGTTA 57.984 37.500 0.00 0.00 0.00 2.41
5201 8540 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
5202 8541 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
5203 8542 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
5204 8543 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
5205 8544 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
5206 8545 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
5207 8546 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
5208 8547 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
5209 8548 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
5210 8549 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
5211 8550 7.609760 ATTCACTCATTTTGCTTCGTATGTA 57.390 32.000 0.00 0.00 0.00 2.29
5212 8551 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
5213 8552 7.801547 AAATTCACTCATTTTGCTTCGTATG 57.198 32.000 0.00 0.00 0.00 2.39
5214 8553 8.511321 TGTAAATTCACTCATTTTGCTTCGTAT 58.489 29.630 0.00 0.00 0.00 3.06
5215 8554 7.801315 GTGTAAATTCACTCATTTTGCTTCGTA 59.199 33.333 0.00 0.00 35.68 3.43
5216 8555 6.636850 GTGTAAATTCACTCATTTTGCTTCGT 59.363 34.615 0.00 0.00 35.68 3.85
5217 8556 6.857964 AGTGTAAATTCACTCATTTTGCTTCG 59.142 34.615 0.00 0.00 44.07 3.79
5248 8587 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
5250 8589 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
5251 8590 8.105197 AGTACCACATACGGATGTATATAGACA 58.895 37.037 14.23 2.07 44.82 3.41
5252 8591 8.503458 AGTACCACATACGGATGTATATAGAC 57.497 38.462 14.23 6.17 44.82 2.59
5253 8592 7.772292 GGAGTACCACATACGGATGTATATAGA 59.228 40.741 14.23 0.00 44.82 1.98
5254 8593 7.555195 TGGAGTACCACATACGGATGTATATAG 59.445 40.741 14.23 0.00 44.82 1.31
5255 8594 7.404481 TGGAGTACCACATACGGATGTATATA 58.596 38.462 14.23 3.33 44.82 0.86
5256 8595 6.250711 TGGAGTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
5257 8596 5.633117 TGGAGTACCACATACGGATGTATA 58.367 41.667 14.23 6.38 44.82 1.47
5258 8597 4.476297 TGGAGTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
5259 8598 3.900971 TGGAGTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
5272 8611 9.103861 CTTTTTAGAGATCTCAAATGGAGTACC 57.896 37.037 24.39 0.00 44.40 3.34
5273 8612 9.877178 TCTTTTTAGAGATCTCAAATGGAGTAC 57.123 33.333 24.39 0.00 44.40 2.73
5274 8613 9.877178 GTCTTTTTAGAGATCTCAAATGGAGTA 57.123 33.333 24.39 2.88 44.40 2.59
5275 8614 8.378565 TGTCTTTTTAGAGATCTCAAATGGAGT 58.621 33.333 24.39 3.88 44.40 3.85
5276 8615 8.783833 TGTCTTTTTAGAGATCTCAAATGGAG 57.216 34.615 24.39 16.88 45.49 3.86
5277 8616 9.573166 TTTGTCTTTTTAGAGATCTCAAATGGA 57.427 29.630 24.39 16.86 0.00 3.41
5283 8622 9.877178 GGAGTATTTGTCTTTTTAGAGATCTCA 57.123 33.333 24.39 8.03 0.00 3.27
5284 8623 9.320352 GGGAGTATTTGTCTTTTTAGAGATCTC 57.680 37.037 15.29 15.29 0.00 2.75
5285 8624 9.052365 AGGGAGTATTTGTCTTTTTAGAGATCT 57.948 33.333 0.00 0.00 0.00 2.75
5286 8625 9.320352 GAGGGAGTATTTGTCTTTTTAGAGATC 57.680 37.037 0.00 0.00 0.00 2.75
5287 8626 8.268605 GGAGGGAGTATTTGTCTTTTTAGAGAT 58.731 37.037 0.00 0.00 0.00 2.75
5288 8627 7.578955 CGGAGGGAGTATTTGTCTTTTTAGAGA 60.579 40.741 0.00 0.00 0.00 3.10
5289 8628 6.535508 CGGAGGGAGTATTTGTCTTTTTAGAG 59.464 42.308 0.00 0.00 0.00 2.43
5290 8629 6.013984 ACGGAGGGAGTATTTGTCTTTTTAGA 60.014 38.462 0.00 0.00 0.00 2.10
5291 8630 6.171213 ACGGAGGGAGTATTTGTCTTTTTAG 58.829 40.000 0.00 0.00 0.00 1.85
5292 8631 6.117975 ACGGAGGGAGTATTTGTCTTTTTA 57.882 37.500 0.00 0.00 0.00 1.52
5293 8632 4.981812 ACGGAGGGAGTATTTGTCTTTTT 58.018 39.130 0.00 0.00 0.00 1.94
5294 8633 4.635699 ACGGAGGGAGTATTTGTCTTTT 57.364 40.909 0.00 0.00 0.00 2.27
5295 8634 5.750352 TTACGGAGGGAGTATTTGTCTTT 57.250 39.130 0.00 0.00 0.00 2.52
5296 8635 5.750352 TTTACGGAGGGAGTATTTGTCTT 57.250 39.130 0.00 0.00 0.00 3.01
5297 8636 5.952347 ATTTACGGAGGGAGTATTTGTCT 57.048 39.130 0.00 0.00 0.00 3.41
5298 8637 8.672823 ATTAATTTACGGAGGGAGTATTTGTC 57.327 34.615 0.00 0.00 0.00 3.18
5305 8644 8.312564 GCTCTTATATTAATTTACGGAGGGAGT 58.687 37.037 0.00 0.00 0.00 3.85
5306 8645 7.488471 CGCTCTTATATTAATTTACGGAGGGAG 59.512 40.741 17.02 0.00 34.63 4.30
5307 8646 7.039504 ACGCTCTTATATTAATTTACGGAGGGA 60.040 37.037 22.59 0.00 35.94 4.20
5308 8647 7.095270 ACGCTCTTATATTAATTTACGGAGGG 58.905 38.462 18.58 18.58 37.30 4.30
5309 8648 8.530269 AACGCTCTTATATTAATTTACGGAGG 57.470 34.615 0.00 0.00 0.00 4.30
5336 8675 8.913656 GCGTTTAGATAACTAAAATAGCGATCT 58.086 33.333 13.70 6.78 45.97 2.75
5337 8676 8.913656 AGCGTTTAGATAACTAAAATAGCGATC 58.086 33.333 13.70 0.00 45.97 3.69
5338 8677 8.813643 AGCGTTTAGATAACTAAAATAGCGAT 57.186 30.769 13.70 7.44 45.97 4.58
5339 8678 8.133627 AGAGCGTTTAGATAACTAAAATAGCGA 58.866 33.333 13.70 0.00 45.97 4.93
5340 8679 8.283340 AGAGCGTTTAGATAACTAAAATAGCG 57.717 34.615 6.76 7.55 45.97 4.26
5357 8696 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
5358 8697 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
5359 8698 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
5360 8699 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
5361 8700 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
5369 8708 9.725206 TCCTAAATACTCCCTCTGTAAACTAAT 57.275 33.333 0.00 0.00 0.00 1.73
5370 8709 9.551339 TTCCTAAATACTCCCTCTGTAAACTAA 57.449 33.333 0.00 0.00 0.00 2.24
5371 8710 8.975295 GTTCCTAAATACTCCCTCTGTAAACTA 58.025 37.037 0.00 0.00 0.00 2.24
5372 8711 7.363617 CGTTCCTAAATACTCCCTCTGTAAACT 60.364 40.741 0.00 0.00 0.00 2.66
5373 8712 6.755607 CGTTCCTAAATACTCCCTCTGTAAAC 59.244 42.308 0.00 0.00 0.00 2.01
5374 8713 6.127253 CCGTTCCTAAATACTCCCTCTGTAAA 60.127 42.308 0.00 0.00 0.00 2.01
5375 8714 5.361857 CCGTTCCTAAATACTCCCTCTGTAA 59.638 44.000 0.00 0.00 0.00 2.41
5376 8715 4.891756 CCGTTCCTAAATACTCCCTCTGTA 59.108 45.833 0.00 0.00 0.00 2.74
5377 8716 3.705072 CCGTTCCTAAATACTCCCTCTGT 59.295 47.826 0.00 0.00 0.00 3.41
5378 8717 3.958798 TCCGTTCCTAAATACTCCCTCTG 59.041 47.826 0.00 0.00 0.00 3.35
5379 8718 4.216708 CTCCGTTCCTAAATACTCCCTCT 58.783 47.826 0.00 0.00 0.00 3.69
5380 8719 3.321396 CCTCCGTTCCTAAATACTCCCTC 59.679 52.174 0.00 0.00 0.00 4.30
5381 8720 3.306613 CCTCCGTTCCTAAATACTCCCT 58.693 50.000 0.00 0.00 0.00 4.20
5382 8721 2.367894 CCCTCCGTTCCTAAATACTCCC 59.632 54.545 0.00 0.00 0.00 4.30
5383 8722 3.303049 TCCCTCCGTTCCTAAATACTCC 58.697 50.000 0.00 0.00 0.00 3.85
5384 8723 3.959449 ACTCCCTCCGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
5385 8724 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
5386 8725 5.537674 TGATACTCCCTCCGTTCCTAAATAC 59.462 44.000 0.00 0.00 0.00 1.89
5387 8726 5.708544 TGATACTCCCTCCGTTCCTAAATA 58.291 41.667 0.00 0.00 0.00 1.40
5388 8727 4.553678 TGATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
5389 8728 3.958798 CTGATACTCCCTCCGTTCCTAAA 59.041 47.826 0.00 0.00 0.00 1.85
5390 8729 3.053095 ACTGATACTCCCTCCGTTCCTAA 60.053 47.826 0.00 0.00 0.00 2.69
5391 8730 2.512896 ACTGATACTCCCTCCGTTCCTA 59.487 50.000 0.00 0.00 0.00 2.94
5392 8731 1.288335 ACTGATACTCCCTCCGTTCCT 59.712 52.381 0.00 0.00 0.00 3.36
5393 8732 1.409427 CACTGATACTCCCTCCGTTCC 59.591 57.143 0.00 0.00 0.00 3.62
5394 8733 2.376109 TCACTGATACTCCCTCCGTTC 58.624 52.381 0.00 0.00 0.00 3.95
5395 8734 2.526888 TCACTGATACTCCCTCCGTT 57.473 50.000 0.00 0.00 0.00 4.44
5396 8735 2.526888 TTCACTGATACTCCCTCCGT 57.473 50.000 0.00 0.00 0.00 4.69
5397 8736 3.887621 TTTTCACTGATACTCCCTCCG 57.112 47.619 0.00 0.00 0.00 4.63
5398 8737 5.745227 TGATTTTTCACTGATACTCCCTCC 58.255 41.667 0.00 0.00 0.00 4.30
5399 8738 6.644347 TCTGATTTTTCACTGATACTCCCTC 58.356 40.000 0.00 0.00 0.00 4.30
5400 8739 6.627087 TCTGATTTTTCACTGATACTCCCT 57.373 37.500 0.00 0.00 0.00 4.20
5401 8740 6.881602 AGTTCTGATTTTTCACTGATACTCCC 59.118 38.462 0.00 0.00 0.00 4.30
5402 8741 7.604164 TCAGTTCTGATTTTTCACTGATACTCC 59.396 37.037 4.05 0.00 39.12 3.85
5403 8742 8.539770 TCAGTTCTGATTTTTCACTGATACTC 57.460 34.615 4.05 0.00 39.12 2.59
5404 8743 7.118971 GCTCAGTTCTGATTTTTCACTGATACT 59.881 37.037 7.78 0.00 42.24 2.12
5405 8744 7.095060 TGCTCAGTTCTGATTTTTCACTGATAC 60.095 37.037 7.78 5.21 42.24 2.24
5406 8745 6.936335 TGCTCAGTTCTGATTTTTCACTGATA 59.064 34.615 7.78 0.24 42.24 2.15
5407 8746 5.766670 TGCTCAGTTCTGATTTTTCACTGAT 59.233 36.000 7.78 0.00 42.24 2.90
5408 8747 5.125356 TGCTCAGTTCTGATTTTTCACTGA 58.875 37.500 2.89 7.25 41.21 3.41
5409 8748 5.428496 TGCTCAGTTCTGATTTTTCACTG 57.572 39.130 2.89 0.00 36.91 3.66
5410 8749 6.444633 CATTGCTCAGTTCTGATTTTTCACT 58.555 36.000 2.89 0.00 0.00 3.41
5411 8750 5.632347 CCATTGCTCAGTTCTGATTTTTCAC 59.368 40.000 2.89 0.00 0.00 3.18
5412 8751 5.535783 TCCATTGCTCAGTTCTGATTTTTCA 59.464 36.000 2.89 0.00 0.00 2.69
5413 8752 6.017400 TCCATTGCTCAGTTCTGATTTTTC 57.983 37.500 2.89 0.00 0.00 2.29
5414 8753 6.600882 ATCCATTGCTCAGTTCTGATTTTT 57.399 33.333 2.89 0.00 0.00 1.94
5415 8754 7.707624 TTATCCATTGCTCAGTTCTGATTTT 57.292 32.000 2.89 0.00 0.00 1.82
5471 8810 3.861113 CCTTCGCATAGTTAGCACGTTAA 59.139 43.478 0.00 0.00 0.00 2.01
5513 8866 5.774498 ACCCACATCTTGTCTTTCTTTTC 57.226 39.130 0.00 0.00 0.00 2.29
5546 8899 1.203287 GAGAAATGGAGGCCACTTTGC 59.797 52.381 5.01 0.39 35.80 3.68
5551 8904 1.341383 ACATGGAGAAATGGAGGCCAC 60.341 52.381 5.01 0.00 35.80 5.01
5589 8942 8.775220 TCACGTGTTCTTTGTATGTAAATTTG 57.225 30.769 16.51 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.