Multiple sequence alignment - TraesCS5A01G095900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G095900 chr5A 100.000 4460 0 0 1 4460 134089852 134094311 0.000000e+00 8237.0
1 TraesCS5A01G095900 chr5B 94.652 1608 63 8 6 1609 134921831 134923419 0.000000e+00 2471.0
2 TraesCS5A01G095900 chr5B 91.446 1321 69 5 2315 3608 134924227 134925530 0.000000e+00 1773.0
3 TraesCS5A01G095900 chr5B 95.007 701 32 2 1614 2311 134923453 134924153 0.000000e+00 1098.0
4 TraesCS5A01G095900 chr5B 94.737 57 2 1 1573 1628 69548105 69548049 2.210000e-13 87.9
5 TraesCS5A01G095900 chr5D 95.209 1482 70 1 6 1486 122202334 122203815 0.000000e+00 2342.0
6 TraesCS5A01G095900 chr5D 91.900 1321 63 6 2315 3608 122204766 122206069 0.000000e+00 1807.0
7 TraesCS5A01G095900 chr5D 94.331 688 32 3 1619 2299 122204007 122204694 0.000000e+00 1048.0
8 TraesCS5A01G095900 chr5D 83.376 788 92 27 3679 4460 373202092 373202846 0.000000e+00 693.0
9 TraesCS5A01G095900 chr5D 93.046 417 25 4 3680 4095 487917836 487917423 1.370000e-169 606.0
10 TraesCS5A01G095900 chr5D 92.208 77 4 2 1533 1609 122203894 122203968 1.700000e-19 108.0
11 TraesCS5A01G095900 chr3D 90.038 783 60 11 3680 4460 358081437 358082203 0.000000e+00 998.0
12 TraesCS5A01G095900 chr3D 91.274 424 30 6 3675 4095 323486787 323486368 5.000000e-159 571.0
13 TraesCS5A01G095900 chr3D 81.132 371 41 15 4093 4460 323486334 323485990 2.040000e-68 270.0
14 TraesCS5A01G095900 chr3D 93.220 59 3 1 1573 1630 435451313 435451255 7.950000e-13 86.1
15 TraesCS5A01G095900 chr6D 89.354 789 63 13 3667 4454 68093082 68092314 0.000000e+00 972.0
16 TraesCS5A01G095900 chr4D 92.807 431 27 4 3667 4095 379144368 379144796 4.900000e-174 621.0
17 TraesCS5A01G095900 chr4D 90.802 424 33 6 3673 4095 43412500 43412918 3.010000e-156 562.0
18 TraesCS5A01G095900 chr4D 83.558 371 42 13 4093 4460 379144830 379145184 3.330000e-86 329.0
19 TraesCS5A01G095900 chr1D 91.566 415 24 8 3683 4095 68236545 68236140 3.010000e-156 562.0
20 TraesCS5A01G095900 chr7D 90.692 419 34 5 3678 4095 484794990 484795404 1.810000e-153 553.0
21 TraesCS5A01G095900 chr7D 90.408 417 36 4 3679 4095 560997464 560997876 3.030000e-151 545.0
22 TraesCS5A01G095900 chr7D 91.803 61 5 0 1567 1627 382256754 382256814 7.950000e-13 86.1
23 TraesCS5A01G095900 chr6A 83.288 371 44 13 4093 4460 563494873 563494518 4.300000e-85 326.0
24 TraesCS5A01G095900 chr1A 83.019 371 45 13 4093 4460 60573794 60573439 2.000000e-83 320.0
25 TraesCS5A01G095900 chr1A 80.250 400 49 21 4057 4453 480834522 480834150 1.580000e-69 274.0
26 TraesCS5A01G095900 chr7A 82.432 370 48 12 4093 4460 178892987 178892633 1.560000e-79 307.0
27 TraesCS5A01G095900 chr7A 94.915 59 3 0 1573 1631 360611199 360611257 4.750000e-15 93.5
28 TraesCS5A01G095900 chr4A 82.086 374 46 16 4091 4460 122624356 122624000 2.610000e-77 300.0
29 TraesCS5A01G095900 chr1B 91.803 61 4 1 1573 1633 368567292 368567233 2.860000e-12 84.2
30 TraesCS5A01G095900 chr1B 88.235 68 6 1 1568 1635 661577959 661577894 3.700000e-11 80.5
31 TraesCS5A01G095900 chr3A 88.406 69 5 2 1573 1640 396298234 396298168 3.700000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G095900 chr5A 134089852 134094311 4459 False 8237.000000 8237 100.000000 1 4460 1 chr5A.!!$F1 4459
1 TraesCS5A01G095900 chr5B 134921831 134925530 3699 False 1780.666667 2471 93.701667 6 3608 3 chr5B.!!$F1 3602
2 TraesCS5A01G095900 chr5D 122202334 122206069 3735 False 1326.250000 2342 93.412000 6 3608 4 chr5D.!!$F2 3602
3 TraesCS5A01G095900 chr5D 373202092 373202846 754 False 693.000000 693 83.376000 3679 4460 1 chr5D.!!$F1 781
4 TraesCS5A01G095900 chr3D 358081437 358082203 766 False 998.000000 998 90.038000 3680 4460 1 chr3D.!!$F1 780
5 TraesCS5A01G095900 chr3D 323485990 323486787 797 True 420.500000 571 86.203000 3675 4460 2 chr3D.!!$R2 785
6 TraesCS5A01G095900 chr6D 68092314 68093082 768 True 972.000000 972 89.354000 3667 4454 1 chr6D.!!$R1 787
7 TraesCS5A01G095900 chr4D 379144368 379145184 816 False 475.000000 621 88.182500 3667 4460 2 chr4D.!!$F2 793

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
647 649 0.742990 TGCCAAATTCCGCGACTAGG 60.743 55.0 8.23 2.45 0.0 3.02 F
1312 1314 0.108615 CGACATCGCCTTCAAGGTCT 60.109 55.0 5.03 0.00 37.8 3.85 F
1571 1625 0.464554 GCCCTGGATTGTAGACTGGC 60.465 60.0 0.00 0.00 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2062 2147 0.929615 CCAAAGCTGCGGTGTTTTTG 59.070 50.0 0.00 0.0 0.00 2.44 R
2816 3002 0.869880 GCACAAAAACACGAGGTGGC 60.870 55.0 0.42 0.0 37.94 5.01 R
3496 3682 0.515564 TTACAAAGAAGCTTCGCGCC 59.484 50.0 20.43 0.0 40.39 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
133 134 3.288964 CACCATTACGTCCTCTCCTACT 58.711 50.000 0.00 0.00 0.00 2.57
178 179 4.844511 GTTTCAAACAACGATAAGTGCG 57.155 40.909 0.00 0.00 0.00 5.34
198 199 1.925946 GCAACTAACAGGCAAAGCACG 60.926 52.381 0.00 0.00 0.00 5.34
229 230 5.878332 TGTCATGTACAATGTGACAATCC 57.122 39.130 22.41 2.95 46.45 3.01
237 238 7.044798 TGTACAATGTGACAATCCGAATATCA 58.955 34.615 0.00 0.00 0.00 2.15
238 239 7.714813 TGTACAATGTGACAATCCGAATATCAT 59.285 33.333 0.00 0.00 0.00 2.45
355 356 2.767505 AGTCAGGGCTTCACTAAAACG 58.232 47.619 0.00 0.00 0.00 3.60
447 449 9.689075 GAAATTTTCTTTTAACTTCACAAGTGC 57.311 29.630 1.79 0.00 41.91 4.40
475 477 1.604278 GCAATAGCCGAATTCCTGGAC 59.396 52.381 0.00 0.00 33.58 4.02
647 649 0.742990 TGCCAAATTCCGCGACTAGG 60.743 55.000 8.23 2.45 0.00 3.02
900 902 1.324740 TGGGTCCGGATCCAACGTAG 61.325 60.000 34.70 0.00 38.97 3.51
966 968 2.285668 CAGCAAGGGGAGGAGGGA 60.286 66.667 0.00 0.00 0.00 4.20
1272 1274 4.467084 TTCGAGTCCATGGGCGCC 62.467 66.667 21.18 21.18 0.00 6.53
1312 1314 0.108615 CGACATCGCCTTCAAGGTCT 60.109 55.000 5.03 0.00 37.80 3.85
1325 1327 2.432628 GGTCTGGTTCTGGCGACG 60.433 66.667 0.00 0.00 0.00 5.12
1347 1352 7.063074 CGACGGTTGATTACATTTCTTACTTCT 59.937 37.037 0.00 0.00 0.00 2.85
1387 1392 4.441634 CCTTAGTACGCTCTTGTGCCTTAT 60.442 45.833 0.00 0.00 0.00 1.73
1428 1433 6.435904 AGCTTACCTCATAGAGTATTGCTAGG 59.564 42.308 0.00 0.00 0.00 3.02
1431 1436 8.865420 TTACCTCATAGAGTATTGCTAGGTAG 57.135 38.462 0.00 0.00 31.09 3.18
1439 1444 7.957992 AGAGTATTGCTAGGTAGTTTACTGT 57.042 36.000 0.00 0.00 0.00 3.55
1461 1466 7.120285 ACTGTTAATGGTTCAGATCATTGACTG 59.880 37.037 17.20 17.20 40.75 3.51
1542 1593 6.226988 CAATGTATTGTTGTTTCCCTTTGC 57.773 37.500 0.00 0.00 33.22 3.68
1543 1594 5.806654 ATGTATTGTTGTTTCCCTTTGCT 57.193 34.783 0.00 0.00 0.00 3.91
1544 1595 4.942852 TGTATTGTTGTTTCCCTTTGCTG 58.057 39.130 0.00 0.00 0.00 4.41
1545 1596 4.646945 TGTATTGTTGTTTCCCTTTGCTGA 59.353 37.500 0.00 0.00 0.00 4.26
1546 1597 4.751767 ATTGTTGTTTCCCTTTGCTGAA 57.248 36.364 0.00 0.00 0.00 3.02
1550 1601 6.418057 TGTTGTTTCCCTTTGCTGAATTAT 57.582 33.333 0.00 0.00 0.00 1.28
1556 1610 2.767960 CCCTTTGCTGAATTATTGCCCT 59.232 45.455 0.00 0.00 0.00 5.19
1571 1625 0.464554 GCCCTGGATTGTAGACTGGC 60.465 60.000 0.00 0.00 0.00 4.85
1652 1735 0.881118 AAGCCATGCAGTAAACGGTG 59.119 50.000 0.00 0.00 0.00 4.94
1811 1894 2.219458 CTCTGTGCTGCATTAGATGGG 58.781 52.381 16.43 5.53 0.00 4.00
1820 1903 4.142790 CTGCATTAGATGGGATGAAGCTT 58.857 43.478 0.00 0.00 0.00 3.74
1826 1909 2.149578 GATGGGATGAAGCTTCCATCG 58.850 52.381 23.42 0.00 43.90 3.84
1861 1944 0.601311 GTGAGAGTCAGGTGCACCAC 60.601 60.000 36.39 26.16 38.89 4.16
1880 1963 5.237996 CACCACCTATTCATACTGAGCATTG 59.762 44.000 0.00 0.00 0.00 2.82
1892 1975 9.045223 TCATACTGAGCATTGATGTGTTATTAC 57.955 33.333 0.00 0.00 0.00 1.89
1895 1978 6.881065 ACTGAGCATTGATGTGTTATTACTGT 59.119 34.615 0.00 0.00 0.00 3.55
1963 2048 1.603802 CACAGATGTGGTGTGGTTGTC 59.396 52.381 5.02 0.00 41.43 3.18
2078 2163 1.227234 GCCAAAAACACCGCAGCTT 60.227 52.632 0.00 0.00 0.00 3.74
2107 2192 2.223144 CGAGCTCTCTAAGGAGATCACG 59.777 54.545 12.85 7.58 45.63 4.35
2221 2306 5.178797 CGGATTGAGGTTAGTGAACTCAAT 58.821 41.667 23.97 23.97 41.25 2.57
2226 2315 9.994432 GATTGAGGTTAGTGAACTCAATATTTG 57.006 33.333 23.83 0.00 40.09 2.32
2233 2322 6.712241 AGTGAACTCAATATTTGTCTCGTG 57.288 37.500 0.00 0.00 0.00 4.35
2237 2326 5.283060 ACTCAATATTTGTCTCGTGCAAC 57.717 39.130 0.00 0.00 0.00 4.17
2269 2358 3.543680 AGAATGGGGTGTTATCTGTCG 57.456 47.619 0.00 0.00 0.00 4.35
2270 2359 2.838202 AGAATGGGGTGTTATCTGTCGT 59.162 45.455 0.00 0.00 0.00 4.34
2271 2360 2.691409 ATGGGGTGTTATCTGTCGTG 57.309 50.000 0.00 0.00 0.00 4.35
2278 2367 5.820947 GGGGTGTTATCTGTCGTGATAAATT 59.179 40.000 8.81 0.00 39.64 1.82
2288 2377 9.784531 ATCTGTCGTGATAAATTGATAATTCCT 57.215 29.630 0.00 0.00 0.00 3.36
2290 2379 7.639039 TGTCGTGATAAATTGATAATTCCTGC 58.361 34.615 0.00 0.00 0.00 4.85
2337 2496 2.569404 AGGTTTGGAAAGGTTTGCACAA 59.431 40.909 0.00 0.00 38.25 3.33
2340 2499 2.237393 TGGAAAGGTTTGCACAATGC 57.763 45.000 0.00 0.00 45.29 3.56
2419 2578 9.902684 ATCTGATTCTTGAGTTCTAATGTTGAT 57.097 29.630 0.00 0.00 0.00 2.57
2488 2647 3.320826 AGGAACATACTTTTGGCCAACAC 59.679 43.478 20.35 0.00 0.00 3.32
2491 2650 4.107127 ACATACTTTTGGCCAACACCTA 57.893 40.909 20.35 0.00 0.00 3.08
2544 2703 4.201930 ACTCCTACGAGCATAAGAGTTTCG 60.202 45.833 0.00 0.00 40.03 3.46
2589 2775 3.341823 CTGCTGGAACTTGATGCTACTT 58.658 45.455 0.00 0.00 0.00 2.24
2597 2783 4.623932 ACTTGATGCTACTTGACTTCCA 57.376 40.909 0.00 0.00 0.00 3.53
2610 2796 7.678947 ACTTGACTTCCATTCTAATGAAGTG 57.321 36.000 17.49 10.57 37.14 3.16
2617 2803 3.549423 CCATTCTAATGAAGTGGCATGCG 60.549 47.826 12.44 0.00 38.70 4.73
2663 2849 2.434884 AAGCATGGACTCACGCCG 60.435 61.111 0.00 0.00 31.65 6.46
2816 3002 0.962855 TCTCTGCTCCTCTGGACACG 60.963 60.000 0.00 0.00 0.00 4.49
2825 3011 3.991051 CTGGACACGCCACCTCGT 61.991 66.667 0.00 0.00 43.33 4.18
2868 3054 6.370166 GGATGAATATAAAGCCGGAAGAGAAG 59.630 42.308 5.05 0.00 0.00 2.85
2870 3056 6.281405 TGAATATAAAGCCGGAAGAGAAGAC 58.719 40.000 5.05 0.00 0.00 3.01
2876 3062 4.256305 AAGCCGGAAGAGAAGACGGATAT 61.256 47.826 5.05 0.00 45.17 1.63
2962 3148 4.692625 ACTGTGTGATGCTGATAGTTTGTC 59.307 41.667 0.00 0.00 0.00 3.18
2974 3160 9.642327 TGCTGATAGTTTGTCTTATAACGTTAA 57.358 29.630 12.81 0.00 0.00 2.01
3030 3216 1.197036 GTCAAGTTAAAGGTGCGAGGC 59.803 52.381 0.00 0.00 0.00 4.70
3042 3228 2.348998 CGAGGCCTGGAAGCTGTT 59.651 61.111 12.00 0.00 0.00 3.16
3093 3279 0.687354 TGTGGGAAGCTGAGAAGTCC 59.313 55.000 0.00 0.00 0.00 3.85
3099 3285 2.125350 GCTGAGAAGTCCGGGCAG 60.125 66.667 9.71 0.00 0.00 4.85
3165 3351 0.889306 AGTACGGAGACCACAGCTTC 59.111 55.000 0.00 0.00 0.00 3.86
3204 3390 3.406764 GATATGCCGGCTGAGAGATTTT 58.593 45.455 29.70 2.54 0.00 1.82
3213 3399 2.877300 GCTGAGAGATTTTGTGGGAGCA 60.877 50.000 0.00 0.00 0.00 4.26
3224 3410 1.543642 TGGGAGCAATTGGGGAGGA 60.544 57.895 7.72 0.00 0.00 3.71
3237 3423 2.290896 TGGGGAGGACAATGTGATGAAC 60.291 50.000 0.00 0.00 0.00 3.18
3258 3444 2.363975 CCCCCTCGACGATTTCCCA 61.364 63.158 0.00 0.00 0.00 4.37
3273 3459 0.323629 TCCCACTGCCTTCGGTTAAG 59.676 55.000 0.00 0.00 34.73 1.85
3291 3477 6.659361 GTTAAGTCCGGAGAAGATTTAACC 57.341 41.667 3.06 0.00 39.03 2.85
3324 3510 1.148273 AGCGGAACACAAGCCTGAA 59.852 52.632 0.00 0.00 0.00 3.02
3453 3639 7.719483 TCAAGAAGTTCATGAAAGCAAAGAAT 58.281 30.769 10.35 0.00 0.00 2.40
3468 3654 4.923281 GCAAAGAATGATTAACGCCAGTTT 59.077 37.500 0.00 0.00 41.49 2.66
3480 3666 2.819608 ACGCCAGTTTGATTGCTAACAT 59.180 40.909 0.00 0.00 33.11 2.71
3494 3680 9.013229 TGATTGCTAACATTGTACTTGATCTTT 57.987 29.630 0.00 0.00 0.00 2.52
3495 3681 9.282247 GATTGCTAACATTGTACTTGATCTTTG 57.718 33.333 0.00 0.00 0.00 2.77
3496 3682 7.144722 TGCTAACATTGTACTTGATCTTTGG 57.855 36.000 0.00 0.00 0.00 3.28
3497 3683 6.150976 TGCTAACATTGTACTTGATCTTTGGG 59.849 38.462 0.00 0.00 0.00 4.12
3498 3684 5.391312 AACATTGTACTTGATCTTTGGGC 57.609 39.130 0.00 0.00 0.00 5.36
3499 3685 3.440173 ACATTGTACTTGATCTTTGGGCG 59.560 43.478 0.00 0.00 0.00 6.13
3500 3686 1.448985 TGTACTTGATCTTTGGGCGC 58.551 50.000 0.00 0.00 0.00 6.53
3501 3687 0.373716 GTACTTGATCTTTGGGCGCG 59.626 55.000 0.00 0.00 0.00 6.86
3502 3688 0.248012 TACTTGATCTTTGGGCGCGA 59.752 50.000 12.10 0.00 0.00 5.87
3503 3689 0.605319 ACTTGATCTTTGGGCGCGAA 60.605 50.000 12.10 3.09 0.00 4.70
3504 3690 0.097674 CTTGATCTTTGGGCGCGAAG 59.902 55.000 21.80 21.80 0.00 3.79
3536 3722 5.646467 AATAACGACGAATGGATAAACGG 57.354 39.130 0.00 0.00 0.00 4.44
3538 3724 1.282817 CGACGAATGGATAAACGGCA 58.717 50.000 0.00 0.00 33.05 5.69
3554 3740 2.027561 ACGGCACAGAACCAGCTTAATA 60.028 45.455 0.00 0.00 0.00 0.98
3555 3741 3.206150 CGGCACAGAACCAGCTTAATAT 58.794 45.455 0.00 0.00 0.00 1.28
3560 3746 6.073003 GGCACAGAACCAGCTTAATATGATAC 60.073 42.308 0.00 0.00 0.00 2.24
3599 3785 4.881273 TGGTTGAGGTATAATGACATGTGC 59.119 41.667 1.15 0.00 0.00 4.57
3608 3794 7.557358 AGGTATAATGACATGTGCTTTGAATCA 59.443 33.333 1.15 0.00 0.00 2.57
3609 3795 8.355169 GGTATAATGACATGTGCTTTGAATCAT 58.645 33.333 1.15 0.00 0.00 2.45
3612 3798 9.961265 ATAATGACATGTGCTTTGAATCATAAG 57.039 29.630 1.15 0.00 0.00 1.73
3613 3799 6.822667 TGACATGTGCTTTGAATCATAAGT 57.177 33.333 1.15 0.00 0.00 2.24
3614 3800 7.218228 TGACATGTGCTTTGAATCATAAGTT 57.782 32.000 1.15 0.00 0.00 2.66
3615 3801 7.660112 TGACATGTGCTTTGAATCATAAGTTT 58.340 30.769 1.15 0.00 0.00 2.66
3616 3802 8.791675 TGACATGTGCTTTGAATCATAAGTTTA 58.208 29.630 1.15 0.00 0.00 2.01
3617 3803 9.624697 GACATGTGCTTTGAATCATAAGTTTAA 57.375 29.630 1.15 0.00 0.00 1.52
3618 3804 9.630098 ACATGTGCTTTGAATCATAAGTTTAAG 57.370 29.630 0.00 0.00 0.00 1.85
3619 3805 8.589629 CATGTGCTTTGAATCATAAGTTTAAGC 58.410 33.333 6.62 6.62 37.76 3.09
3620 3806 7.090173 TGTGCTTTGAATCATAAGTTTAAGCC 58.910 34.615 10.03 4.16 36.75 4.35
3621 3807 6.531594 GTGCTTTGAATCATAAGTTTAAGCCC 59.468 38.462 10.03 0.00 36.75 5.19
3622 3808 6.437162 TGCTTTGAATCATAAGTTTAAGCCCT 59.563 34.615 10.03 0.00 36.75 5.19
3623 3809 7.039082 TGCTTTGAATCATAAGTTTAAGCCCTT 60.039 33.333 10.03 0.00 36.75 3.95
3624 3810 7.819415 GCTTTGAATCATAAGTTTAAGCCCTTT 59.181 33.333 3.02 0.00 32.70 3.11
3625 3811 9.710900 CTTTGAATCATAAGTTTAAGCCCTTTT 57.289 29.630 0.00 0.00 0.00 2.27
3666 3852 1.739067 GGCGTCTGGCTTATGAAACT 58.261 50.000 0.00 0.00 42.94 2.66
3667 3853 2.084546 GGCGTCTGGCTTATGAAACTT 58.915 47.619 0.00 0.00 42.94 2.66
3668 3854 2.096013 GGCGTCTGGCTTATGAAACTTC 59.904 50.000 0.00 0.00 42.94 3.01
3669 3855 3.003480 GCGTCTGGCTTATGAAACTTCT 58.997 45.455 0.00 0.00 39.11 2.85
3670 3856 3.437049 GCGTCTGGCTTATGAAACTTCTT 59.563 43.478 0.00 0.00 39.11 2.52
3671 3857 4.083271 GCGTCTGGCTTATGAAACTTCTTT 60.083 41.667 0.00 0.00 39.11 2.52
3672 3858 5.562890 GCGTCTGGCTTATGAAACTTCTTTT 60.563 40.000 0.00 0.00 39.11 2.27
3673 3859 6.438763 CGTCTGGCTTATGAAACTTCTTTTT 58.561 36.000 0.00 0.00 0.00 1.94
3740 3926 5.104374 CCGTCATGCTATTTTGCAGAAAAT 58.896 37.500 0.00 0.00 46.71 1.82
3746 3932 4.531732 TGCTATTTTGCAGAAAATCCCCTT 59.468 37.500 0.00 0.00 40.31 3.95
3749 3935 7.102993 GCTATTTTGCAGAAAATCCCCTTAAA 58.897 34.615 0.00 0.00 40.31 1.52
3820 4007 6.110707 TCCATAGCTTTTTAACCCTAACTCG 58.889 40.000 0.00 0.00 0.00 4.18
3943 4132 7.246674 ACGATGAAATGTTAATCAATAGCGT 57.753 32.000 0.00 0.00 0.00 5.07
4006 4196 4.385358 AAATGAACACTTCGGCAAAACT 57.615 36.364 0.00 0.00 0.00 2.66
4026 4216 4.407365 ACTAGGATGGGGAACAAAAACAG 58.593 43.478 0.00 0.00 0.00 3.16
4033 4223 6.833933 GGATGGGGAACAAAAACAGTATCTAT 59.166 38.462 0.00 0.00 0.00 1.98
4100 4327 3.260884 AGACGTCTTAAGATTGAGGCCAA 59.739 43.478 13.58 0.00 36.61 4.52
4230 4458 2.808523 TTTTCATCCGTTGCAATGCA 57.191 40.000 13.42 2.72 36.47 3.96
4231 4459 2.063156 TTTCATCCGTTGCAATGCAC 57.937 45.000 7.72 2.39 38.71 4.57
4232 4460 0.109827 TTCATCCGTTGCAATGCACG 60.110 50.000 7.72 14.71 38.71 5.34
4233 4461 1.514657 CATCCGTTGCAATGCACGG 60.515 57.895 29.56 29.56 46.29 4.94
4234 4462 2.699768 ATCCGTTGCAATGCACGGG 61.700 57.895 32.14 24.98 45.60 5.28
4235 4463 3.669344 CCGTTGCAATGCACGGGT 61.669 61.111 28.54 0.00 43.66 5.28
4236 4464 2.334653 CGTTGCAATGCACGGGTT 59.665 55.556 7.72 0.00 38.71 4.11
4237 4465 1.299773 CGTTGCAATGCACGGGTTT 60.300 52.632 7.72 0.00 38.71 3.27
4238 4466 0.873743 CGTTGCAATGCACGGGTTTT 60.874 50.000 7.72 0.00 38.71 2.43
4239 4467 1.294857 GTTGCAATGCACGGGTTTTT 58.705 45.000 7.72 0.00 38.71 1.94
4261 4489 3.669344 CCGTTGCAATGCACGGGT 61.669 61.111 28.54 0.00 43.66 5.28
4343 4585 4.415332 GGCCAGCGTCGACGAGAA 62.415 66.667 39.74 0.00 43.02 2.87
4396 4638 5.189342 TGGGATGCCATGTGTTGAAATAAAT 59.811 36.000 0.00 0.00 0.00 1.40
4402 4644 7.834803 TGCCATGTGTTGAAATAAATGACATA 58.165 30.769 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 8.950210 CAATGTAACATCAGTTCAATTCTAGGT 58.050 33.333 0.00 0.00 39.15 3.08
4 5 9.166173 TCAATGTAACATCAGTTCAATTCTAGG 57.834 33.333 0.00 0.00 39.15 3.02
133 134 6.982141 ACGTTTAAGTGTAGTGTGATCTGAAA 59.018 34.615 0.00 0.00 0.00 2.69
178 179 1.770957 GTGCTTTGCCTGTTAGTTGC 58.229 50.000 0.00 0.00 0.00 4.17
198 199 1.428448 TGTACATGACACTGCTTCGC 58.572 50.000 0.00 0.00 31.20 4.70
237 238 7.094162 CGACTAGTGGAATGATCATAGGTGTAT 60.094 40.741 9.04 0.00 0.00 2.29
238 239 6.206829 CGACTAGTGGAATGATCATAGGTGTA 59.793 42.308 9.04 0.00 0.00 2.90
355 356 6.086502 CGTAATTCGATCTAACTCCGTGATTC 59.913 42.308 0.00 0.00 42.86 2.52
447 449 0.107703 TTCGGCTATTGCAGGTGAGG 60.108 55.000 0.66 0.00 41.91 3.86
475 477 4.735132 TTTGAGGGCTCGGCGTCG 62.735 66.667 1.15 1.15 37.82 5.12
514 516 3.007940 TGACACCGAGATTTCCTCAACAT 59.992 43.478 0.00 0.00 42.06 2.71
574 576 4.124351 CGCCGGCGAACAGTCCTA 62.124 66.667 44.86 0.00 42.83 2.94
608 610 0.107643 TGTGACAAGTGGGATTGCGA 59.892 50.000 0.00 0.00 33.28 5.10
669 671 4.516195 GCGTCTTCCTCCGCCTCC 62.516 72.222 0.00 0.00 43.96 4.30
676 678 0.459411 GCTTCTCCTGCGTCTTCCTC 60.459 60.000 0.00 0.00 0.00 3.71
759 761 3.249961 CGCCTATTCCCCTCCCCC 61.250 72.222 0.00 0.00 0.00 5.40
831 833 1.706443 GTTACAAGAACCGACCGAGG 58.294 55.000 0.00 0.00 37.30 4.63
900 902 3.075005 TGGCTAGGTCGGACCAGC 61.075 66.667 28.45 28.45 41.95 4.85
966 968 1.367471 GCCGCCCTCTTTTGCTTTT 59.633 52.632 0.00 0.00 0.00 2.27
1312 1314 2.107041 ATCAACCGTCGCCAGAACCA 62.107 55.000 0.00 0.00 0.00 3.67
1347 1352 8.890718 CGTACTAAGGCTGATATACTGCTATAA 58.109 37.037 0.00 0.00 41.95 0.98
1358 1363 3.952323 ACAAGAGCGTACTAAGGCTGATA 59.048 43.478 0.00 0.00 46.46 2.15
1371 1376 5.186198 AGAAATAATAAGGCACAAGAGCGT 58.814 37.500 0.00 0.00 34.64 5.07
1400 1405 7.891561 AGCAATACTCTATGAGGTAAGCTAAG 58.108 38.462 0.00 0.00 34.25 2.18
1423 1428 7.820872 TGAACCATTAACAGTAAACTACCTAGC 59.179 37.037 0.00 0.00 0.00 3.42
1428 1433 9.431887 TGATCTGAACCATTAACAGTAAACTAC 57.568 33.333 0.00 0.00 33.93 2.73
1431 1436 9.559958 CAATGATCTGAACCATTAACAGTAAAC 57.440 33.333 7.88 0.00 32.31 2.01
1439 1444 6.484288 ACCAGTCAATGATCTGAACCATTAA 58.516 36.000 12.25 0.00 34.02 1.40
1461 1466 8.727910 CCAGTTTAGTAAAGGAATTACAAGACC 58.272 37.037 0.00 0.00 45.29 3.85
1519 1570 5.990996 AGCAAAGGGAAACAACAATACATTG 59.009 36.000 0.37 0.37 43.26 2.82
1520 1571 5.990996 CAGCAAAGGGAAACAACAATACATT 59.009 36.000 0.00 0.00 0.00 2.71
1521 1572 5.304101 TCAGCAAAGGGAAACAACAATACAT 59.696 36.000 0.00 0.00 0.00 2.29
1522 1573 4.646945 TCAGCAAAGGGAAACAACAATACA 59.353 37.500 0.00 0.00 0.00 2.29
1523 1574 5.195001 TCAGCAAAGGGAAACAACAATAC 57.805 39.130 0.00 0.00 0.00 1.89
1524 1575 5.860941 TTCAGCAAAGGGAAACAACAATA 57.139 34.783 0.00 0.00 0.00 1.90
1525 1576 4.751767 TTCAGCAAAGGGAAACAACAAT 57.248 36.364 0.00 0.00 0.00 2.71
1526 1577 4.751767 ATTCAGCAAAGGGAAACAACAA 57.248 36.364 0.00 0.00 0.00 2.83
1527 1578 4.751767 AATTCAGCAAAGGGAAACAACA 57.248 36.364 0.00 0.00 0.00 3.33
1528 1579 6.347644 GCAATAATTCAGCAAAGGGAAACAAC 60.348 38.462 0.00 0.00 0.00 3.32
1529 1580 5.700373 GCAATAATTCAGCAAAGGGAAACAA 59.300 36.000 0.00 0.00 0.00 2.83
1530 1581 5.237048 GCAATAATTCAGCAAAGGGAAACA 58.763 37.500 0.00 0.00 0.00 2.83
1531 1582 4.631377 GGCAATAATTCAGCAAAGGGAAAC 59.369 41.667 0.00 0.00 0.00 2.78
1542 1593 6.016777 GTCTACAATCCAGGGCAATAATTCAG 60.017 42.308 0.00 0.00 0.00 3.02
1543 1594 5.827797 GTCTACAATCCAGGGCAATAATTCA 59.172 40.000 0.00 0.00 0.00 2.57
1544 1595 6.016777 CAGTCTACAATCCAGGGCAATAATTC 60.017 42.308 0.00 0.00 0.00 2.17
1545 1596 5.829924 CAGTCTACAATCCAGGGCAATAATT 59.170 40.000 0.00 0.00 0.00 1.40
1546 1597 5.380043 CAGTCTACAATCCAGGGCAATAAT 58.620 41.667 0.00 0.00 0.00 1.28
1550 1601 1.281867 CCAGTCTACAATCCAGGGCAA 59.718 52.381 0.00 0.00 0.00 4.52
1571 1625 7.723324 TCTTATATTTCTTTACGGAGGGAGTG 58.277 38.462 0.00 0.00 0.00 3.51
1609 1663 7.844493 TCAAAAGTACTCCCTCAGTAAGTAA 57.156 36.000 0.00 0.00 39.44 2.24
1612 1666 5.639931 GCTTCAAAAGTACTCCCTCAGTAAG 59.360 44.000 0.00 0.00 39.44 2.34
1617 1700 2.708861 TGGCTTCAAAAGTACTCCCTCA 59.291 45.455 0.00 0.00 0.00 3.86
1652 1735 7.369803 ACAATACATTCATCAGTTCAGACAC 57.630 36.000 0.00 0.00 0.00 3.67
1811 1894 2.356069 GGGAAACGATGGAAGCTTCATC 59.644 50.000 27.02 22.92 38.04 2.92
1826 1909 5.420409 ACTCTCACTTCATATTCGGGAAAC 58.580 41.667 0.00 0.00 0.00 2.78
1870 1953 6.881065 ACAGTAATAACACATCAATGCTCAGT 59.119 34.615 0.00 0.00 0.00 3.41
1963 2048 2.162681 CCACTTAGCCTTGGTCCTTTG 58.837 52.381 0.00 0.00 0.00 2.77
2062 2147 0.929615 CCAAAGCTGCGGTGTTTTTG 59.070 50.000 0.00 0.00 0.00 2.44
2078 2163 4.084287 TCCTTAGAGAGCTCGTTAACCAA 58.916 43.478 8.37 0.00 34.09 3.67
2107 2192 2.934553 GGGTTGAGAAACCAGTATACGC 59.065 50.000 9.69 0.00 44.60 4.42
2146 2231 3.041946 AGCAATATTCTTCCCCTCGACT 58.958 45.455 0.00 0.00 0.00 4.18
2221 2306 7.277098 GGAATTAGTAGTTGCACGAGACAAATA 59.723 37.037 0.00 0.00 0.00 1.40
2226 2315 4.745649 AGGAATTAGTAGTTGCACGAGAC 58.254 43.478 0.00 0.00 0.00 3.36
2233 2322 5.998363 CCCCATTCTAGGAATTAGTAGTTGC 59.002 44.000 0.00 0.00 0.00 4.17
2237 2326 6.749036 ACACCCCATTCTAGGAATTAGTAG 57.251 41.667 0.00 0.00 0.00 2.57
2311 2400 6.098409 TGTGCAAACCTTTCCAAACCTATTAA 59.902 34.615 0.00 0.00 0.00 1.40
2312 2401 5.598830 TGTGCAAACCTTTCCAAACCTATTA 59.401 36.000 0.00 0.00 0.00 0.98
2313 2402 4.407296 TGTGCAAACCTTTCCAAACCTATT 59.593 37.500 0.00 0.00 0.00 1.73
2314 2403 3.964031 TGTGCAAACCTTTCCAAACCTAT 59.036 39.130 0.00 0.00 0.00 2.57
2315 2404 3.366396 TGTGCAAACCTTTCCAAACCTA 58.634 40.909 0.00 0.00 0.00 3.08
2317 2406 2.682155 TGTGCAAACCTTTCCAAACC 57.318 45.000 0.00 0.00 0.00 3.27
2320 2409 2.559440 GCATTGTGCAAACCTTTCCAA 58.441 42.857 0.00 0.00 44.26 3.53
2337 2496 3.498481 TGGTACTCCAAAGCAAAGAGCAT 60.498 43.478 0.00 0.00 43.09 3.79
2351 2510 2.241176 TGGGATTGAACCATGGTACTCC 59.759 50.000 20.12 19.67 31.83 3.85
2473 2632 3.579534 TGTAGGTGTTGGCCAAAAGTA 57.420 42.857 22.47 6.66 0.00 2.24
2474 2633 2.445682 TGTAGGTGTTGGCCAAAAGT 57.554 45.000 22.47 7.78 0.00 2.66
2526 2685 3.497297 TGCGAAACTCTTATGCTCGTA 57.503 42.857 0.00 0.00 32.23 3.43
2527 2686 2.363788 TGCGAAACTCTTATGCTCGT 57.636 45.000 0.00 0.00 32.23 4.18
2544 2703 4.349501 GAACTCTTGCATGCTTTAGATGC 58.650 43.478 20.33 0.00 45.45 3.91
2589 2775 4.943705 GCCACTTCATTAGAATGGAAGTCA 59.056 41.667 12.91 0.00 36.03 3.41
2597 2783 2.033801 GCGCATGCCACTTCATTAGAAT 59.966 45.455 13.15 0.00 31.36 2.40
2660 2846 2.028125 TAGGAGCTACCATGCACGGC 62.028 60.000 0.00 0.00 42.04 5.68
2708 2894 4.282703 GCTTCAAGGATATCAATGCCCAAT 59.717 41.667 4.83 0.00 0.00 3.16
2816 3002 0.869880 GCACAAAAACACGAGGTGGC 60.870 55.000 0.42 0.00 37.94 5.01
2825 3011 1.214175 TCCTCTCCAGGCACAAAAACA 59.786 47.619 0.00 0.00 40.12 2.83
2868 3054 5.673818 GCAAGAAACCAAAGTCATATCCGTC 60.674 44.000 0.00 0.00 0.00 4.79
2870 3056 4.155826 TGCAAGAAACCAAAGTCATATCCG 59.844 41.667 0.00 0.00 0.00 4.18
2876 3062 3.698539 TGATGTGCAAGAAACCAAAGTCA 59.301 39.130 0.00 0.00 0.00 3.41
2925 3111 8.528643 AGCATCACACAGTTAATACTAGTTGTA 58.471 33.333 0.00 0.00 31.96 2.41
2927 3113 7.545615 TCAGCATCACACAGTTAATACTAGTTG 59.454 37.037 0.00 0.00 31.96 3.16
2934 3120 8.882736 CAAACTATCAGCATCACACAGTTAATA 58.117 33.333 0.00 0.00 0.00 0.98
2962 3148 8.083462 TCAATAGCCTGCATTAACGTTATAAG 57.917 34.615 9.18 3.52 0.00 1.73
2974 3160 2.820197 CAGCATCATCAATAGCCTGCAT 59.180 45.455 0.00 0.00 32.18 3.96
3030 3216 1.672356 CCGGTCAACAGCTTCCAGG 60.672 63.158 0.00 0.00 0.00 4.45
3093 3279 3.735181 GAAGTACTGGTACTGCCCG 57.265 57.895 13.25 0.00 44.96 6.13
3099 3285 3.825014 TGACACAGAGGAAGTACTGGTAC 59.175 47.826 0.00 2.97 38.30 3.34
3141 3327 0.963962 TGTGGTCTCCGTACTCAACC 59.036 55.000 0.00 0.00 0.00 3.77
3165 3351 2.943653 GCAAACGGGACAGGTTCG 59.056 61.111 0.00 0.00 0.00 3.95
3204 3390 1.383799 CTCCCCAATTGCTCCCACA 59.616 57.895 0.00 0.00 0.00 4.17
3213 3399 3.011595 TCATCACATTGTCCTCCCCAATT 59.988 43.478 0.00 0.00 30.28 2.32
3273 3459 3.515330 TCGGTTAAATCTTCTCCGGAC 57.485 47.619 0.00 0.00 41.27 4.79
3291 3477 0.933097 CCGCTGGTTCTGAATCATCG 59.067 55.000 17.32 17.32 0.00 3.84
3453 3639 3.505680 AGCAATCAAACTGGCGTTAATCA 59.494 39.130 0.00 0.00 31.86 2.57
3468 3654 8.565896 AAGATCAAGTACAATGTTAGCAATCA 57.434 30.769 0.00 0.00 0.00 2.57
3480 3666 1.810151 GCGCCCAAAGATCAAGTACAA 59.190 47.619 0.00 0.00 0.00 2.41
3494 3680 2.281484 AAAGAAGCTTCGCGCCCA 60.281 55.556 20.43 0.00 40.39 5.36
3495 3681 1.296056 TACAAAGAAGCTTCGCGCCC 61.296 55.000 20.43 0.00 40.39 6.13
3496 3682 0.515564 TTACAAAGAAGCTTCGCGCC 59.484 50.000 20.43 0.00 40.39 6.53
3497 3683 2.527442 ATTACAAAGAAGCTTCGCGC 57.473 45.000 20.43 0.00 39.57 6.86
3498 3684 4.013397 CGTTATTACAAAGAAGCTTCGCG 58.987 43.478 20.43 14.70 0.00 5.87
3499 3685 5.013859 GTCGTTATTACAAAGAAGCTTCGC 58.986 41.667 20.43 0.00 0.00 4.70
3500 3686 5.060077 TCGTCGTTATTACAAAGAAGCTTCG 59.940 40.000 20.43 9.39 0.00 3.79
3501 3687 6.385537 TCGTCGTTATTACAAAGAAGCTTC 57.614 37.500 19.11 19.11 0.00 3.86
3502 3688 6.774354 TTCGTCGTTATTACAAAGAAGCTT 57.226 33.333 0.00 0.00 0.00 3.74
3503 3689 6.183360 CCATTCGTCGTTATTACAAAGAAGCT 60.183 38.462 0.00 0.00 0.00 3.74
3504 3690 5.957796 CCATTCGTCGTTATTACAAAGAAGC 59.042 40.000 0.00 0.00 0.00 3.86
3505 3691 7.285783 TCCATTCGTCGTTATTACAAAGAAG 57.714 36.000 0.00 0.00 0.00 2.85
3506 3692 7.837202 ATCCATTCGTCGTTATTACAAAGAA 57.163 32.000 0.00 0.00 0.00 2.52
3507 3693 8.929827 TTATCCATTCGTCGTTATTACAAAGA 57.070 30.769 0.00 0.00 0.00 2.52
3508 3694 9.417284 GTTTATCCATTCGTCGTTATTACAAAG 57.583 33.333 0.00 0.00 0.00 2.77
3509 3695 8.109391 CGTTTATCCATTCGTCGTTATTACAAA 58.891 33.333 0.00 0.00 0.00 2.83
3510 3696 7.254050 CCGTTTATCCATTCGTCGTTATTACAA 60.254 37.037 0.00 0.00 0.00 2.41
3519 3705 1.005347 GTGCCGTTTATCCATTCGTCG 60.005 52.381 0.00 0.00 0.00 5.12
3536 3722 6.346919 CGTATCATATTAAGCTGGTTCTGTGC 60.347 42.308 0.00 0.00 0.00 4.57
3538 3724 7.050970 TCGTATCATATTAAGCTGGTTCTGT 57.949 36.000 0.00 0.00 0.00 3.41
3560 3746 8.383318 ACCTCAACCATGATAGATTTTATTCG 57.617 34.615 0.00 0.00 34.37 3.34
3587 3773 8.959548 ACTTATGATTCAAAGCACATGTCATTA 58.040 29.630 0.00 0.00 0.00 1.90
3599 3785 9.710900 AAAAGGGCTTAAACTTATGATTCAAAG 57.289 29.630 0.00 0.00 0.00 2.77
3640 3826 2.264005 TAAGCCAGACGCCTCAAAAA 57.736 45.000 0.00 0.00 38.78 1.94
3641 3827 2.083774 CATAAGCCAGACGCCTCAAAA 58.916 47.619 0.00 0.00 38.78 2.44
3642 3828 1.277842 TCATAAGCCAGACGCCTCAAA 59.722 47.619 0.00 0.00 38.78 2.69
3643 3829 0.901827 TCATAAGCCAGACGCCTCAA 59.098 50.000 0.00 0.00 38.78 3.02
3644 3830 0.901827 TTCATAAGCCAGACGCCTCA 59.098 50.000 0.00 0.00 38.78 3.86
3645 3831 1.666189 GTTTCATAAGCCAGACGCCTC 59.334 52.381 0.00 0.00 38.78 4.70
3646 3832 1.279271 AGTTTCATAAGCCAGACGCCT 59.721 47.619 0.00 0.00 38.78 5.52
3647 3833 1.739067 AGTTTCATAAGCCAGACGCC 58.261 50.000 0.00 0.00 38.78 5.68
3648 3834 3.003480 AGAAGTTTCATAAGCCAGACGC 58.997 45.455 0.00 0.00 37.98 5.19
3649 3835 5.613358 AAAGAAGTTTCATAAGCCAGACG 57.387 39.130 0.00 0.00 0.00 4.18
3929 4118 8.749841 AGACTGATCATACGCTATTGATTAAC 57.250 34.615 0.00 0.00 0.00 2.01
3943 4132 6.450545 CGCTATGAAGGAAAGACTGATCATA 58.549 40.000 0.00 0.00 0.00 2.15
4006 4196 4.463050 ACTGTTTTTGTTCCCCATCCTA 57.537 40.909 0.00 0.00 0.00 2.94
4063 4254 0.744874 CGTCTCCCTTTCGGCATAGA 59.255 55.000 0.00 0.00 0.00 1.98
4100 4327 2.095978 CTTCCCACTCCCGTTGACGT 62.096 60.000 2.63 0.00 37.74 4.34
4214 4442 1.501292 CGTGCATTGCAACGGATGA 59.499 52.632 13.94 0.00 41.47 2.92
4215 4443 4.060658 CGTGCATTGCAACGGATG 57.939 55.556 13.94 0.00 41.47 3.51
4218 4446 2.691674 AAACCCGTGCATTGCAACGG 62.692 55.000 29.57 29.57 45.37 4.44
4219 4447 0.873743 AAAACCCGTGCATTGCAACG 60.874 50.000 13.94 17.64 41.47 4.10
4220 4448 1.294857 AAAAACCCGTGCATTGCAAC 58.705 45.000 13.94 7.00 41.47 4.17
4221 4449 3.768633 AAAAACCCGTGCATTGCAA 57.231 42.105 13.94 0.00 41.47 4.08
4236 4464 2.799412 GTGCATTGCAACGGATGAAAAA 59.201 40.909 13.94 0.00 41.47 1.94
4237 4465 2.402305 GTGCATTGCAACGGATGAAAA 58.598 42.857 13.94 0.00 41.47 2.29
4238 4466 1.665448 CGTGCATTGCAACGGATGAAA 60.665 47.619 13.94 0.00 41.47 2.69
4239 4467 0.109827 CGTGCATTGCAACGGATGAA 60.110 50.000 13.94 0.00 41.47 2.57
4240 4468 1.501292 CGTGCATTGCAACGGATGA 59.499 52.632 13.94 0.00 41.47 2.92
4296 4525 5.993106 TGACATCAATACAACACGTTTCA 57.007 34.783 0.00 0.00 0.00 2.69
4309 4551 4.012374 CTGGCCTTAGTGTTGACATCAAT 58.988 43.478 3.32 0.00 38.24 2.57
4343 4585 9.753674 TGTGTTTCTATTTATCTTTCTTCCCAT 57.246 29.630 0.00 0.00 0.00 4.00
4402 4644 8.116026 ACCATGAGTCCAAAATTTAATAGGTCT 58.884 33.333 0.00 0.00 0.00 3.85
4414 4656 9.627123 CCTAATCTAATAACCATGAGTCCAAAA 57.373 33.333 0.00 0.00 0.00 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.